CmoCh04G019120 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G019120
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	DNA-binding storekeeper protein-related
Location	Cmo_Chr04 : 9758309 .. 9759058 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTCAAATGCCCGAGAGCCCATCATCATTGGCCTTGTTGTTCTTCTTCTTCTTCATGTTTCTATTTGTATATGTATTTGCTTACTTGGTTGTGCTCCAGAATTGGGGGCCCAAGCACAGGCTAGAGGCCTCGAGCTGCTTCATATCACTCGCCCATGGCTGTCCCGTCGTCATCATGGCCATCATTGCAATTCTCCAAGCTCCAAACATGGCTGATTTCGCCGCTCTCAATACCAAATACCAGGGCCTTGTCCTCGAGTACAGCATGGCTTATTTCTTGATGGATCTTCTTCACTTCATACTGTTTTATCCACGAGATTTCGTCTTTATATGTCATCATCTGGCAGTGCTTTACGTGTTCGCTACATGCCATTACTTGGTTAGTCGTGGTGCTCTGCCCATTCTGGTGCTTTTGGTGCTTGCGGAGTTCAGCAGTGGGTGCCAGAATGTTTGGACCCTAGCGGGTTACAGAAGGGCTGATGTGCCGGCCGCCGCTAAGTTTCAGGACTTCGTGTCTCCATATTTCTTCACCTTTTACAGCATTCTCAGAGGGGGCTTCGCGCCTGTCTTTCTGCATAAGATGGGAGAATTTTATGTCAGCAGTGCAGCAGAAAATTTGATTCCTAAGTGGGCTTGGATTTCATGGATGGGTGTTATTGGAACTGCCATTTTTGTTAGCATACTGTGGGTCGGAAATCATTGGGTTCTCTGGTTTCGACGTACAAAGCATGGGAAAGCAGTGTGA

mRNA sequence

ATGGAGTTTCAAATGCCCGAGAGCCCATCATCATTGGCCTTGTTGTTCTTCTTCTTCTTCATGTTTCTATTTGTATATGTATTTGCTTACTTGGTTGTGCTCCAGAATTGGGGGCCCAAGCACAGGCTAGAGGCCTCGAGCTGCTTCATATCACTCGCCCATGGCTGTCCCGTCGTCATCATGGCCATCATTGCAATTCTCCAAGCTCCAAACATGGCTGATTTCGCCGCTCTCAATACCAAATACCAGGGCCTTGTCCTCGAGTACAGCATGGCTTATTTCTTGATGGATCTTCTTCACTTCATACTGTTTTATCCACGAGATTTCGTCTTTATATGTCATCATCTGGCAGTGCTTTACGTGTTCGCTACATGCCATTACTTGGTTAGTCGTGGTGCTCTGCCCATTCTGGTGCTTTTGGTGCTTGCGGAGTTCAGCAGTGGGTGCCAGAATGTTTGGACCCTAGCGGGTTACAGAAGGGCTGATGTGCCGGCCGCCGCTAAGTTTCAGGACTTCGTGTCTCCATATTTCTTCACCTTTTACAGCATTCTCAGAGGGGGCTTCGCGCCTGTCTTTCTGCATAAGATGGGAGAATTTTATGTCAGCAGTGCAGCAGAAAATTTGATTCCTAAGTGGGCTTGGATTTCATGGATGGGTGTTATTGGAACTGCCATTTTTGTTAGCATACTGTGGGTCGGAAATCATTGGGTTCTCTGGTTTCGACGTACAAAGCATGGGAAAGCAGTGTGA

Coding sequence (CDS)

ATGGAGTTTCAAATGCCCGAGAGCCCATCATCATTGGCCTTGTTGTTCTTCTTCTTCTTCATGTTTCTATTTGTATATGTATTTGCTTACTTGGTTGTGCTCCAGAATTGGGGGCCCAAGCACAGGCTAGAGGCCTCGAGCTGCTTCATATCACTCGCCCATGGCTGTCCCGTCGTCATCATGGCCATCATTGCAATTCTCCAAGCTCCAAACATGGCTGATTTCGCCGCTCTCAATACCAAATACCAGGGCCTTGTCCTCGAGTACAGCATGGCTTATTTCTTGATGGATCTTCTTCACTTCATACTGTTTTATCCACGAGATTTCGTCTTTATATGTCATCATCTGGCAGTGCTTTACGTGTTCGCTACATGCCATTACTTGGTTAGTCGTGGTGCTCTGCCCATTCTGGTGCTTTTGGTGCTTGCGGAGTTCAGCAGTGGGTGCCAGAATGTTTGGACCCTAGCGGGTTACAGAAGGGCTGATGTGCCGGCCGCCGCTAAGTTTCAGGACTTCGTGTCTCCATATTTCTTCACCTTTTACAGCATTCTCAGAGGGGGCTTCGCGCCTGTCTTTCTGCATAAGATGGGAGAATTTTATGTCAGCAGTGCAGCAGAAAATTTGATTCCTAAGTGGGCTTGGATTTCATGGATGGGTGTTATTGGAACTGCCATTTTTGTTAGCATACTGTGGGTCGGAAATCATTGGGTTCTCTGGTTTCGACGTACAAAGCATGGGAAAGCAGTGTGA

Homology

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BLAST of CmoCh04G019120 vs. TrEMBL
Match: A0A0A0KVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590130 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 3.2e-89
Identity = 169/233 (72.53%), Postives = 193/233 (82.83%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77
           FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG PVVI+A IAILQ+PN  DFAA
Sbjct: 8   FFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSPNSTDFAA 67

Query: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137
            NTK+Q LVLEYS+AYF +DLLH +LF P DFVFI HHLAVLYVF TC+Y+V  GA+PIL
Sbjct: 68  PNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPIL 127

Query: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197
            LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + KMG
Sbjct: 128 GLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAPVVVCKMG 187

Query: 198 EFYVSS--AAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTKHGKA 249
           EFYV S   + NLIP WAWISWM VIG AIF S+LWVGNHW+LWF R  + K+
Sbjct: 188 EFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

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BLAST of CmoCh04G019120 vs. TrEMBL
Match: M5XG72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010551mg PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69
Identity = 139/237 (58.65%), Postives = 168/237 (70.89%), Query Frame = 1


Query: 5   MPESPSSLALLFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAII 64
           M  S   +  L  FF +FL +Y+FAY VV +NWGPKHR EASSC ISLAHG    IM+I 
Sbjct: 1   MENSILGIPTLPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIMSIY 60

Query: 65  AILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124
           +IL +     FA+ N   Q  +LE+S+AYF +DLLH++LF+P D +FI HHLA LYVF T
Sbjct: 61  SILHSRKAPTFASPNDTLQNTILEFSIAYFFLDLLHYLLFFPSDVLFILHHLATLYVFTT 120

Query: 125 CHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184
           C Y+V  GA  ILVLL LAE +SGCQNVWTLA YRRAD PAAAK  DF+SP F+ FYS+ 
Sbjct: 121 CRYVVHHGAYAILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVF 180

Query: 185 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFR 242
           RG   P+F+ K+G FY S AAE  IP+WAW+SWM VI  AI +SILWV N W+ W R
Sbjct: 181 RGFLGPLFMFKLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHR 237

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BLAST of CmoCh04G019120 vs. TrEMBL
Match: A0A061EEX7_THECC (DNA-binding storekeeper protein-related OS=Theobroma cacao GN=TCM_010762 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.9e-69
Identity = 136/235 (57.87%), Postives = 172/235 (73.19%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMAD-FA 77
           FF +FL +Y+FAY +V +NWGPKHR EASSCFISLAHG P V MA  A++        FA
Sbjct: 14  FFLLFLSIYLFAYFLVFRNWGPKHRPEASSCFISLAHGTPAVFMAAHALINTTQSPPTFA 73

Query: 78  ALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPI 137
           + N+    +VLEYS++YFLMDL+H+++F+P D +FI HHLA LYVF TC Y+V  GA  +
Sbjct: 74  SPNSALDNVVLEYSISYFLMDLVHYLVFFPNDILFILHHLATLYVFFTCRYMVHHGAFAL 133

Query: 138 LVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKM 197
           LVLLVLAE +S CQNVWTLAG+RRAD PAAAK  + +SP F+  YS++RG   P F++KM
Sbjct: 134 LVLLVLAEVTSLCQNVWTLAGFRRADAPAAAKLYELLSPPFYALYSVVRGILGPFFVYKM 193

Query: 198 GEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWF--RRTKHGKAV 250
             FY+S  A NLIP+WAW SW+ VI TAI VSI+WV +HW+ W+  R  K GK V
Sbjct: 194 VVFYLSGVAGNLIPRWAWSSWIVVIVTAILVSIVWVFHHWIDWYKGRNYKAGKKV 248

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BLAST of CmoCh04G019120 vs. TrEMBL
Match: V4VFR6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032558mg PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.3e-65
Identity = 127/224 (56.70%), Postives = 170/224 (75.89%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77
           FF MF  +YVFAY VV + W PKHR EASSCFISLAHG P V+++  A + +     FA+
Sbjct: 14  FFLMFYALYVFAYFVVFRGW-PKHRAEASSCFISLAHGTPAVLLSSHAAITS-TQTTFAS 73

Query: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137
            NT  Q +VLE+SMAYFLMDLLH+I+F PRD +FI HH+A LYVF TC Y+V  GA  +L
Sbjct: 74  PNTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHVATLYVFVTCRYVVHYGAFELL 133

Query: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197
           +LL+LAE +S CQNVW+L+ + +ADVPA+A+  D +S  F+TFYS++RG   P+F++K+ 
Sbjct: 134 ILLILAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYSVVRGILGPLFVYKLW 193

Query: 198 EFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFR 242
            FY+S AA+NLIP WAW+SWM VI +AI +S+LWV ++W+ W+R
Sbjct: 194 LFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYR 235

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BLAST of CmoCh04G019120 vs. TrEMBL
Match: A0A067GQK4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025888mg PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 4.3e-65
Identity = 127/224 (56.70%), Postives = 170/224 (75.89%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77
           FF MF  +YVFAY VV + W PKHR EASSCFISLAHG P V+++  A +++     FA+
Sbjct: 14  FFLMFYALYVFAYFVVFRGW-PKHRAEASSCFISLAHGTPAVLLSSHAAIRS-TQTTFAS 73

Query: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137
            NT  Q +VLE+SMAYFLMDLLH+I+F PRD +FI HH A LYVF TC Y+V  GA  +L
Sbjct: 74  PNTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFELL 133

Query: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197
           +LL+LAE +S CQNVW+L+ + +ADVPA+A+  D +S  F+TFYS++RG   P+F++K+ 
Sbjct: 134 ILLILAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYSVVRGILGPLFVYKLW 193

Query: 198 EFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFR 242
            FY+S AA+NLIP WAW+SWM VI +AI +S+LWV ++W+ W+R
Sbjct: 194 LFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYR 235

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BLAST of CmoCh04G019120 vs. TAIR10
Match: AT3G25950.1 (AT3G25950.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-59
Identity = 119/243 (48.97%), Postives = 161/243 (66.26%), Query Frame = 1


Query: 8   SPSSLALLF-FFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAI 67
           +PSS    F  F  +FL VY   Y +V + W     L AS C +SL HG P VIMA  A+
Sbjct: 7   NPSSFLATFPSFLLLFLAVYTIGYFLVFRTWKQSSHLGAS-CLMSLFHGTPAVIMASHAL 66

Query: 68  LQAP--NMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 127
           L  P  ++  FA+ NT  +  VL++SMAYF +DLLH+++F P DF+FI HH+A LYVFAT
Sbjct: 67  LTTPRADVHSFASPNTAVESNVLDFSMAYFTVDLLHYLIFLPNDFIFILHHIATLYVFAT 126

Query: 128 CHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 187
           C + V  GA  +L+LL+LAE +S CQNVWT+ GYR+ DV  A + ++ +SP F+ FY+++
Sbjct: 127 CRFAVGHGAHGLLLLLILAEATSACQNVWTITGYRKNDVALARRVRELLSPPFYLFYTVV 186

Query: 188 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTK 247
           RG   PV L+ M  FY S AA+ ++P+WAW+SW+ VIG AI VSILWV  +W+ WFR   
Sbjct: 187 RGLAGPVVLYDMATFYGSGAADGVVPRWAWLSWLVVIGFAILVSILWVLRNWLDWFRENN 246

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BLAST of CmoCh04G019120 vs. TAIR10
Match: AT5G14280.1 (AT5G14280.1 DNA-binding storekeeper protein-related)

HSP 1 Score: 219.9 bits (559), Expect = 1.7e-57
Identity = 120/248 (48.39%), Postives = 154/248 (62.10%), Query Frame = 1


Query: 2   EFQMPESPSSLALLFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIM 61
           E  +P+ P        FF MFL +Y+ AY +V +NW P+ R EASSC IS+ HG P V +
Sbjct: 325 EISIPDLP-------IFFSMFLTIYLIAYFIVFRNWKPQIRPEASSCLISIFHGSPAVFL 384

Query: 62  AIIAILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYV 121
           A  A+  +   + FA+ NT  Q  VL++S+AYFL DL H+I+F P D +FI HH+A L+V
Sbjct: 385 ATRAVFSSSERS-FASANTAAQNTVLDFSVAYFLTDLFHYIVFNPNDVLFIGHHVATLFV 444

Query: 122 FATCHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPA--AAKFQDFVSPYFFT 181
           F TC +LV  GA  IL LL+LAE +S CQN WTLAG R+ D  +  A K  D +SP F+ 
Sbjct: 445 FLTCRFLVFHGACAILGLLILAEVTSACQNAWTLAGARKNDPESRLAVKVYDLLSPPFYA 504

Query: 182 FYSILRGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLW 241
           FYSI+RG   P+F  KM  FY    A  +IP W WISW  V+G AI VSILW+ N W+  
Sbjct: 505 FYSIVRGVLGPLFFGKMVAFYARGGAHGVIPNWLWISWAIVVGIAITVSILWIWNLWIEL 564

Query: 242 FRRTKHGK 248
           F   K  K
Sbjct: 565 FSERKANK 564

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BLAST of CmoCh04G019120 vs. TAIR10
Match: AT3G27270.1 (AT3G27270.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein)

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-52
Identity = 109/227 (48.02%), Postives = 148/227 (65.20%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77
           FF +F+FVY+  YL + + W P+ R  ASSC ISL HG   V++A  A+L  PN   F++
Sbjct: 13  FFSIFIFVYLLGYLFIFKKWTPETRPLASSCLISLLHGVSAVVLATNALLSDPNRG-FSS 72

Query: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPR---DFVFICHHLAVLYVFATCHYLVSRGAL 137
           +NT+ Q  +L++S AYFL DL+H  +F      D +F  HHLAVL+VF TC Y+V+ GA 
Sbjct: 73  VNTQSQNSILDFSSAYFLADLVHLAVFPSPAGGDSLFAAHHLAVLFVFLTCRYMVAHGAC 132

Query: 138 PILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLH 197
            +L LLV+AE +S CQN WTLA  R  D P A     FV+  F+  YS+ R   AP+ + 
Sbjct: 133 ALLALLVVAEATSACQNTWTLADARGKDAPLAVSLHRFVTVPFYASYSVCRCVLAPLLIV 192

Query: 198 KMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFR 242
           KM  FYVS  A+++IP+W W+SW  VI TA+ VSILW+ N WVL+F+
Sbjct: 193 KMTWFYVSGGADDVIPRWVWVSWTVVIVTAVTVSILWIWNLWVLFFQ 238

[Close]

BLAST of CmoCh04G019120 vs. NCBI nr
Match: gi|449435460|ref|XP_004135513.1| (PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 4.7e-89
Identity = 169/233 (72.53%), Postives = 193/233 (82.83%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77
           FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG PVVI+A IAILQ+PN  DFAA
Sbjct: 8   FFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSPNSTDFAA 67

Query: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137
            NTK+Q LVLEYS+AYF +DLLH +LF P DFVFI HHLAVLYVF TC+Y+V  GA+PIL
Sbjct: 68  PNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPIL 127

Query: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197
            LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + KMG
Sbjct: 128 GLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAPVVVCKMG 187

Query: 198 EFYVSS--AAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTKHGKA 249
           EFYV S   + NLIP WAWISWM VIG AIF S+LWVGNHW+LWF R  + K+
Sbjct: 188 EFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

[Close]

BLAST of CmoCh04G019120 vs. NCBI nr
Match: gi|659090562|ref|XP_008446083.1| (PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo])

HSP 1 Score: 335.1 bits (858), Expect = 1.0e-88
Identity = 168/232 (72.41%), Postives = 193/232 (83.19%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMADFAA 77
           FF MFLFVY FAY V+L+NWGPKHRLEASSCFISLAHG PVVI+A IAILQ+PN  DFAA
Sbjct: 8   FFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSPNPTDFAA 67

Query: 78  LNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPIL 137
            NTK+Q LVLEYS+AYF +DLLH + F P DFVFI HHLAVLYVF TC+Y+V  GA+PIL
Sbjct: 68  PNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVGCGAVPIL 127

Query: 138 VLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKMG 197
            LLV+AE SSGCQN WTLAGYRR ++ AAAKF++FV+PYF TFYS+LR G APV + KMG
Sbjct: 128 GLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAPVVVCKMG 187

Query: 198 EFYVSS--AAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFRRTKHGK 248
           EFYV S   + NLIP WAWISW+ VIG AIF S+LWVGNHW+LWFR T++ K
Sbjct: 188 EFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239

[Close]

BLAST of CmoCh04G019120 vs. NCBI nr
Match: gi|596203875|ref|XP_007223755.1| (hypothetical protein PRUPE_ppa010551mg [Prunus persica])

HSP 1 Score: 270.4 bits (690), Expect = 3.1e-69
Identity = 139/237 (58.65%), Postives = 168/237 (70.89%), Query Frame = 1


Query: 5   MPESPSSLALLFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAII 64
           M  S   +  L  FF +FL +Y+FAY VV +NWGPKHR EASSC ISLAHG    IM+I 
Sbjct: 1   MENSILGIPTLPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIMSIY 60

Query: 65  AILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124
           +IL +     FA+ N   Q  +LE+S+AYF +DLLH++LF+P D +FI HHLA LYVF T
Sbjct: 61  SILHSRKAPTFASPNDTLQNTILEFSIAYFFLDLLHYLLFFPSDVLFILHHLATLYVFTT 120

Query: 125 CHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184
           C Y+V  GA  ILVLL LAE +SGCQNVWTLA YRRAD PAAAK  DF+SP F+ FYS+ 
Sbjct: 121 CRYVVHHGAYAILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVF 180

Query: 185 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFR 242
           RG   P+F+ K+G FY S AAE  IP+WAW+SWM VI  AI +SILWV N W+ W R
Sbjct: 181 RGFLGPLFMFKLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHR 237

[Close]

BLAST of CmoCh04G019120 vs. NCBI nr
Match: gi|590695820|ref|XP_007044997.1| (DNA-binding storekeeper protein-related [Theobroma cacao])

HSP 1 Score: 270.0 bits (689), Expect = 4.1e-69
Identity = 136/235 (57.87%), Postives = 172/235 (73.19%), Query Frame = 1


Query: 18  FFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAIIAILQAPNMAD-FA 77
           FF +FL +Y+FAY +V +NWGPKHR EASSCFISLAHG P V MA  A++        FA
Sbjct: 14  FFLLFLSIYLFAYFLVFRNWGPKHRPEASSCFISLAHGTPAVFMAAHALINTTQSPPTFA 73

Query: 78  ALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFATCHYLVSRGALPI 137
           + N+    +VLEYS++YFLMDL+H+++F+P D +FI HHLA LYVF TC Y+V  GA  +
Sbjct: 74  SPNSALDNVVLEYSISYFLMDLVHYLVFFPNDILFILHHLATLYVFFTCRYMVHHGAFAL 133

Query: 138 LVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSILRGGFAPVFLHKM 197
           LVLLVLAE +S CQNVWTLAG+RRAD PAAAK  + +SP F+  YS++RG   P F++KM
Sbjct: 134 LVLLVLAEVTSLCQNVWTLAGFRRADAPAAAKLYELLSPPFYALYSVVRGILGPFFVYKM 193

Query: 198 GEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWF--RRTKHGKAV 250
             FY+S  A NLIP+WAW SW+ VI TAI VSI+WV +HW+ W+  R  K GK V
Sbjct: 194 VVFYLSGVAGNLIPRWAWSSWIVVIVTAILVSIVWVFHHWIDWYKGRNYKAGKKV 248

[Close]

BLAST of CmoCh04G019120 vs. NCBI nr
Match: gi|645230676|ref|XP_008222043.1| (PREDICTED: uncharacterized protein LOC103321970 [Prunus mume])

HSP 1 Score: 268.9 bits (686), Expect = 9.1e-69
Identity = 137/237 (57.81%), Postives = 168/237 (70.89%), Query Frame = 1


Query: 5   MPESPSSLALLFFFFFMFLFVYVFAYLVVLQNWGPKHRLEASSCFISLAHGCPVVIMAII 64
           M  S   +  L  FF +FL +Y+FAY VV +NWGPKHR EASSC ISLAHG    I++I 
Sbjct: 1   MENSILGIPTLPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIISIY 60

Query: 65  AILQAPNMADFAALNTKYQGLVLEYSMAYFLMDLLHFILFYPRDFVFICHHLAVLYVFAT 124
           +IL +     FA+ N  +Q  +LE+S+AYF +DLLH++ F+P D +FI HHLA LYVF T
Sbjct: 61  SILHSHKAPTFASPNDTFQNTILEFSIAYFFLDLLHYLFFFPSDVLFILHHLATLYVFTT 120

Query: 125 CHYLVSRGALPILVLLVLAEFSSGCQNVWTLAGYRRADVPAAAKFQDFVSPYFFTFYSIL 184
           C Y+V  GA  ILVLL LAE +SGCQNVWTLA YRRAD PAAAK  DF+SP F+ FYS+ 
Sbjct: 121 CRYVVHHGAYAILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVF 180

Query: 185 RGGFAPVFLHKMGEFYVSSAAENLIPKWAWISWMGVIGTAIFVSILWVGNHWVLWFR 242
           RG   P+F+ K+G FY S AAE  IP+WAW+SWM VI  AI +SILWV N W+ W R
Sbjct: 181 RGFLGPLFMFKLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHR 237

The following BLAST results are available for this feature:

BLAST of CmoCh04G019120 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G019120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVB7_CUCSA	3.2e-89	72.53	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590130 PE=4 SV=1	[more]
M5XG72_PRUPE	2.2e-69	58.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010551mg PE=4 SV=1	[more]
A0A061EEX7_THECC	2.9e-69	57.87	DNA-binding storekeeper protein-related OS=Theobroma cacao GN=TCM_010762 PE=4 SV...	[more]
V4VFR6_9ROSI	4.3e-65	56.70	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032558mg PE=4 SV=1	[more]
A0A067GQK4_CITSI	4.3e-65	56.70	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025888mg PE=4 SV=1	[more]

BLAST of CmoCh04G019120 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G25950.1	1.1e-59	48.97	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]
AT5G14280.1	1.7e-57	48.39	DNA-binding storekeeper protein-related	[more]
AT3G27270.1	1.7e-52	48.02	TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein	[more]

BLAST of CmoCh04G019120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435460\|ref\|XP_004135513.1\|	4.7e-89	72.53	PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus]	[more]
gi\|659090562\|ref\|XP_008446083.1\|	1.0e-88	72.41	PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo]	[more]
gi\|596203875\|ref\|XP_007223755.1\|	3.1e-69	58.65	hypothetical protein PRUPE_ppa010551mg [Prunus persica]	[more]
gi\|590695820\|ref\|XP_007044997.1\|	4.1e-69	57.87	DNA-binding storekeeper protein-related [Theobroma cacao]	[more]
gi\|645230676\|ref\|XP_008222043.1\|	9.1e-69	57.81	PREDICTED: uncharacterized protein LOC103321970 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006634	TLC-dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G019120.1	CmoCh04G019120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 40..244 score: 8.0
IPR006634	TRAM/LAG1/CLN8 homology domain	PROFILE	PS50922	TLC	coord: 40..244 score: 8
None	No IPR available	PANTHER	PTHR31766	FAMILY NOT NAMED	coord: 1..245 score: 1.1E
None	No IPR available	PANTHER	PTHR31766:SF2	DNA-BINDING STOREKEEPER PROTEIN-LIKE PROTEIN-RELATED	coord: 1..245 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G019120	Cucsa.075480	Cucumber (Gy14) v1	cgycmoB0123
CmoCh04G019120	CmaCh04G018170	Cucurbita maxima (Rimu)	cmacmoB728
CmoCh04G019120	Cla022991	Watermelon (97103) v1	cmowmB732
CmoCh04G019120	Csa5G590130	Cucumber (Chinese Long) v2	cmocuB739
CmoCh04G019120	MELO3C011890	Melon (DHL92) v3.5.1	cmomeB632
CmoCh04G019120	ClCG11G013900	Watermelon (Charleston Gray)	cmowcgB631
CmoCh04G019120	CSPI05G21640	Wild cucumber (PI 183967)	cmocpiB748
CmoCh04G019120	Lsi04G006570	Bottle gourd (USVL1VR-Ls)	cmolsiB661
CmoCh04G019120	MELO3C011890.2	Melon (DHL92) v3.6.1	cmomedB721
CmoCh04G019120	CsaV3_5G030510	Cucumber (Chinese Long) v3	cmocucB0875
CmoCh04G019120	Cla97C11G219880	Watermelon (97103) v2	cmowmbB707
CmoCh04G019120	Bhi07G001506	Wax gourd	cmowgoB0890
CmoCh04G019120	Carg14276	Silver-seed gourd	carcmoB0343

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G019120	Cucurbita pepo (Zucchini)	cmocpeB646
CmoCh04G019120	Cucurbita pepo (Zucchini)	cmocpeB656
CmoCh04G019120	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G019120	Cucurbita pepo (Zucchini)	cmocpeB710
CmoCh04G019120	Bottle gourd (USVL1VR-Ls)	cmolsiB698
CmoCh04G019120	Cucumber (Gy14) v2	cgybcmoB232
CmoCh04G019120	Cucumber (Gy14) v2	cgybcmoB653
CmoCh04G019120	Melon (DHL92) v3.6.1	cmomedB761
CmoCh04G019120	Silver-seed gourd	carcmoB0858
CmoCh04G019120	Silver-seed gourd	carcmoB0945
CmoCh04G019120	Cucumber (Chinese Long) v3	cmocucB0808
CmoCh04G019120	Watermelon (97103) v2	cmowmbB763
CmoCh04G019120	Wax gourd	cmowgoB0868
CmoCh04G019120	Cucurbita moschata (Rifu)	cmocmoB147
CmoCh04G019120	Cucurbita moschata (Rifu)	cmocmoB341
CmoCh04G019120	Cucurbita moschata (Rifu)	cmocmoB472
CmoCh04G019120	Cucumber (Gy14) v1	cgycmoB1092
CmoCh04G019120	Cucurbita maxima (Rimu)	cmacmoB189
CmoCh04G019120	Cucurbita maxima (Rimu)	cmacmoB422
CmoCh04G019120	Cucurbita maxima (Rimu)	cmacmoB785
CmoCh04G019120	Wild cucumber (PI 183967)	cmocpiB693
CmoCh04G019120	Cucumber (Chinese Long) v2	cmocuB682
CmoCh04G019120	Melon (DHL92) v3.5.1	cmomeB673
CmoCh04G019120	Watermelon (Charleston Gray)	cmowcgB683
CmoCh04G019120	Watermelon (97103) v1	cmowmB666