Cla022991 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022991
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	DNA-binding protein (Fragment) (AHRD V1 **-- Q5IRD2_9ROSI); contains Interpro domain(s) IPR006634 TRAM, LAG1 and CLN8 homology
Location	Chr11 : 16247180 .. 16247899 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTCAATTACCTTTCTTCTTCTTCATGTTTCTACTTATATATGCATTCGCTTACTTGGTTCTGCTTCGAAATTGGGGGCCAAAGCACAGGCTAGAAGCTTCAAGTTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTAATCATGGCTATAATTGCAATCCTCCAAGCTCCAAATACGACCGATTTCGCGGCTCCCAATACGAAATTCCAAACCCTAGTTCTGGAATACAGCATAGCTTATTTCTTGTTGGATCTTCTTCATTGTATATTGTTTTCACCACATGATTTCGTCTTCATATTCCATCATTTGGCAGTAATTTATGTGTTCGTTACATGTAATTACTTGGTTCATCGTGGCGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTGAGCAGTGGGTGCCAGAATGTTTGGACCCTTGCGGGTTATAGAAGGGCTGATGTTGTAGCCGCGGCTAAGTTTCAAGACTTTGTGTCTCCGTATTTTTTCACGTTTTATAGCATTTTAAGAGTGGGCTTAGCGCCGGCTTTTTTGTATAAAATGGGAGGATTCTACGTTGGTAGTATGGGTAAGGATTTGATTCCTAAGTGGGCTTGGATTTCTTGGATGGGTGTAATTGGAATGGCTATTTTTGGTAGTATGTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCTCTACAAACCATGGAAAATCCGTATAA

mRNA sequence

ATGGAGTTTCAATTACCTTTCTTCTTCTTCATGTTTCTACTTATATATGCATTCGCTTACTTGGTTCTGCTTCGAAATTGGGGGCCAAAGCACAGGCTAGAAGCTTCAAGTTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTAATCATGGCTATAATTGCAATCCTCCAAGCTCCAAATACGACCGATTTCGCGGCTCCCAATACGAAATTCCAAACCCTAGTTCTGGAATACAGCATAGCTTATTTCTTGTTGGATCTTCTTCATTGTATATTGTTTTCACCACATGATTTCGTCTTCATATTCCATCATTTGGCAGTAATTTATGTGTTCGTTACATGTAATTACTTGGTTCATCGTGGCGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTGAGCAGTGGGTGCCAGAATGTTTGGACCCTTGCGGGTTATAGAAGGGCTGATGTTGTAGCCGCGGCTAAGTTTCAAGACTTTGTGTCTCCGTATTTTTTCACGTTTTATAGCATTTTAAGAGTGGGCTTAGCGCCGGCTTTTTTGTATAAAATGGGAGGATTCTACGTTGGTAGTATGGGTAAGGATTTGATTCCTAAGTGGGCTTGGATTTCTTGGATGGGTGTAATTGGAATGGCTATTTTTGGTAGTATGTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCTCTACAAACCATGGAAAATCCGTATAA

Coding sequence (CDS)

ATGGAGTTTCAATTACCTTTCTTCTTCTTCATGTTTCTACTTATATATGCATTCGCTTACTTGGTTCTGCTTCGAAATTGGGGGCCAAAGCACAGGCTAGAAGCTTCAAGTTGCTTCATATCACTCGCCCATGGCAGTCCCGTCGTAATCATGGCTATAATTGCAATCCTCCAAGCTCCAAATACGACCGATTTCGCGGCTCCCAATACGAAATTCCAAACCCTAGTTCTGGAATACAGCATAGCTTATTTCTTGTTGGATCTTCTTCATTGTATATTGTTTTCACCACATGATTTCGTCTTCATATTCCATCATTTGGCAGTAATTTATGTGTTCGTTACATGTAATTACTTGGTTCATCGTGGCGCTGTGCCGATTCTAGGGCTTTTGGTGGTGGCGGAATTGAGCAGTGGGTGCCAGAATGTTTGGACCCTTGCGGGTTATAGAAGGGCTGATGTTGTAGCCGCGGCTAAGTTTCAAGACTTTGTGTCTCCGTATTTTTTCACGTTTTATAGCATTTTAAGAGTGGGCTTAGCGCCGGCTTTTTTGTATAAAATGGGAGGATTCTACGTTGGTAGTATGGGTAAGGATTTGATTCCTAAGTGGGCTTGGATTTCTTGGATGGGTGTAATTGGAATGGCTATTTTTGGTAGTATGTTGTGGGTTGGAAATCATTGGCTTCTTTGGTTTCGCTCTACAAACCATGGAAAATCCGTATAA

Protein sequence

MEFQLPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKSV

Homology

[Close]

BLAST of Cla022991 vs. TrEMBL
Match: A0A0A0KVB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590130 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 1.8e-108
Identity = 190/240 (79.17%), Postives = 212/240 (88.33%), Query Frame = 1


Query: 1   MEFQLPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF MFL +Y FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N+TDFAAPNTKFQ LVLEYSIAYF LDLLHC+LFSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGSMGK--DLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKS 239
             + KMG FYVGS+G   +LIP WAWISWM VIG+AIFGS+LWVGNHWLLWF    + KS
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

[Close]

BLAST of Cla022991 vs. TrEMBL
Match: M5XG72_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010551mg PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 5.3e-73
Identity = 135/228 (59.21%), Postives = 163/228 (71.49%), Query Frame = 1


Query: 5   LPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF +FLLIY FAY V+ RNWGPKHR EASSC ISLAHG    IM+I +IL +     
Sbjct: 11  LPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIMSIYSILHSRKAPT 70

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+PN   Q  +LE+SIAYF LDLLH +LF P D +FI HHLA +YVF TC Y+VH GA 
Sbjct: 71  FASPNDTLQNTILEFSIAYFFLDLLHYLLFFPSDVLFILHHLATLYVFTTCRYVVHHGAY 130

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLY 184
            IL LL +AE++SGCQNVWTLA YRRAD  AAAK  DF+SP F+ FYS+ R  L P F++
Sbjct: 131 AILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVFRGFLGPLFMF 190

Query: 185 KMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRS 233
           K+G FY     +  IP+WAW+SWM VI +AI  S+LWV N W+ W R+
Sbjct: 191 KLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHRN 238

[Close]

BLAST of Cla022991 vs. TrEMBL
Match: A0A061EEX7_THECC (DNA-binding storekeeper protein-related OS=Theobroma cacao GN=TCM_010762 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.8e-71
Identity = 133/239 (55.65%), Postives = 175/239 (73.22%), Query Frame = 1


Query: 6   PFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAIL---QAPNT 65
           P FF +FL IY FAY ++ RNWGPKHR EASSCFISLAHG+P V MA  A++   Q+P T
Sbjct: 12  PTFFLLFLSIYLFAYFLVFRNWGPKHRPEASSCFISLAHGTPAVFMAAHALINTTQSPPT 71

Query: 66  TDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRG 125
             FA+PN+    +VLEYSI+YFL+DL+H ++F P+D +FI HHLA +YVF TC Y+VH G
Sbjct: 72  --FASPNSALDNVVLEYSISYFLMDLVHYLVFFPNDILFILHHLATLYVFFTCRYMVHHG 131

Query: 126 AVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAF 185
           A  +L LLV+AE++S CQNVWTLAG+RRAD  AAAK  + +SP F+  YS++R  L P F
Sbjct: 132 AFALLVLLVLAEVTSLCQNVWTLAGFRRADAPAAAKLYELLSPPFYALYSVVRGILGPFF 191

Query: 186 LYKMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNH--GKSV 240
           +YKM  FY+  +  +LIP+WAW SW+ VI  AI  S++WV +HW+ W++  N+  GK V
Sbjct: 192 VYKMVVFYLSGVAGNLIPRWAWSSWIVVIVTAILVSIVWVFHHWIDWYKGRNYKAGKKV 248

[Close]

BLAST of Cla022991 vs. TrEMBL
Match: A0A067GQK4_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025888mg PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67
Identity = 125/234 (53.42%), Postives = 171/234 (73.08%), Query Frame = 1


Query: 8   FFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAA 67
           FF MF  +Y FAY V+ R W PKHR EASSCFISLAHG+P V+++  A +++  TT FA+
Sbjct: 14  FFLMFYALYVFAYFVVFRGW-PKHRAEASSCFISLAHGTPAVLLSSHAAIRSTQTT-FAS 73

Query: 68  PNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPIL 127
           PNT  Q +VLE+S+AYFL+DLLH I+F+P D +FI HH A +YVFVTC Y+VH GA  +L
Sbjct: 74  PNTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHAATLYVFVTCRYVVHYGAFELL 133

Query: 128 GLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMG 187
            LL++AE++S CQNVW+L+ + +ADV A+A+  D +S  F+TFYS++R  L P F+YK+ 
Sbjct: 134 ILLILAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYSVVRGILGPLFVYKLW 193

Query: 188 GFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNH--GKSV 240
            FY+     +LIP WAW+SWM VI  AI  S+LWV ++W+ W+R+  +  GK V
Sbjct: 194 LFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYRNLGYSAGKKV 245

[Close]

BLAST of Cla022991 vs. TrEMBL
Match: V4VFR6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032558mg PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.4e-67
Identity = 125/234 (53.42%), Postives = 171/234 (73.08%), Query Frame = 1


Query: 8   FFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTDFAA 67
           FF MF  +Y FAY V+ R W PKHR EASSCFISLAHG+P V+++  A + +  TT FA+
Sbjct: 14  FFLMFYALYVFAYFVVFRGW-PKHRAEASSCFISLAHGTPAVLLSSHAAITSTQTT-FAS 73

Query: 68  PNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAVPIL 127
           PNT  Q +VLE+S+AYFL+DLLH I+F+P D +FI HH+A +YVFVTC Y+VH GA  +L
Sbjct: 74  PNTTLQDIVLEFSMAYFLMDLLHYIIFTPRDILFILHHVATLYVFVTCRYVVHYGAFELL 133

Query: 128 GLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLYKMG 187
            LL++AE++S CQNVW+L+ + +ADV A+A+  D +S  F+TFYS++R  L P F+YK+ 
Sbjct: 134 ILLILAEITSPCQNVWSLSSFWKADVPASARLHDLLSAPFYTFYSVVRGILGPLFVYKLW 193

Query: 188 GFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNH--GKSV 240
            FY+     +LIP WAW+SWM VI  AI  S+LWV ++W+ W+R+  +  GK V
Sbjct: 194 LFYISGAADNLIPIWAWLSWMVVITSAILLSLLWVLSNWIGWYRNLGYSAGKKV 245

[Close]

BLAST of Cla022991 vs. NCBI nr
Match: gi|449435460|ref|XP_004135513.1| (PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus])

HSP 1 Score: 400.2 bits (1027), Expect = 2.5e-108
Identity = 190/240 (79.17%), Postives = 212/240 (88.33%), Query Frame = 1


Query: 1   MEFQLPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF MFL +Y FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFAMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILAAIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N+TDFAAPNTKFQ LVLEYSIAYF LDLLHC+LFSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NSTDFAAPNTKFQALVLEYSIAYFSLDLLHCLLFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEMVAAAKFEEFVAPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGSMGK--DLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGKS 239
             + KMG FYVGS+G   +LIP WAWISWM VIG+AIFGS+LWVGNHWLLWF    + KS
Sbjct: 181 VVVCKMGEFYVGSLGMSGNLIPTWAWISWMCVIGLAIFGSVLWVGNHWLLWFHRITNTKS 240

[Close]

BLAST of Cla022991 vs. NCBI nr
Match: gi|659090562|ref|XP_008446083.1| (PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo])

HSP 1 Score: 399.4 bits (1025), Expect = 4.3e-108
Identity = 190/239 (79.50%), Postives = 210/239 (87.87%), Query Frame = 1


Query: 1   MEFQLPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAP 60
           M+ QLP FF MFL +Y FAY VLLRNWGPKHRLEASSCFISLAHG+PVVI+A IAILQ+P
Sbjct: 1   MDLQLPLFFSMFLFVYTFAYSVLLRNWGPKHRLEASSCFISLAHGTPVVILATIAILQSP 60

Query: 61  NTTDFAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVH 120
           N TDFAAPNTKFQ LVLEYSIAYF LDLLHC+ FSP+DFVFIFHHLAV+YVFVTCNY+V 
Sbjct: 61  NPTDFAAPNTKFQALVLEYSIAYFSLDLLHCVSFSPNDFVFIFHHLAVLYVFVTCNYIVG 120

Query: 121 RGAVPILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAP 180
            GAVPILGLLVVAELSSGCQN WTLAGYRR ++VAAAKF++FV+PYF TFYS+LRVGLAP
Sbjct: 121 CGAVPILGLLVVAELSSGCQNAWTLAGYRRTEIVAAAKFEEFVTPYFLTFYSVLRVGLAP 180

Query: 181 AFLYKMGGFYVGS--MGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRSTNHGK 238
             + KMG FYVGS  M  +LIP WAWISW+ VIGMAIFGS+LWVGNHWLLWFR T + K
Sbjct: 181 VVVCKMGEFYVGSLVMSGNLIPTWAWISWLCVIGMAIFGSVLWVGNHWLLWFRPTQNRK 239

[Close]

BLAST of Cla022991 vs. NCBI nr
Match: gi|596203875|ref|XP_007223755.1| (hypothetical protein PRUPE_ppa010551mg [Prunus persica])

HSP 1 Score: 282.3 bits (721), Expect = 7.7e-73
Identity = 135/228 (59.21%), Postives = 163/228 (71.49%), Query Frame = 1


Query: 5   LPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF +FLLIY FAY V+ RNWGPKHR EASSC ISLAHG    IM+I +IL +     
Sbjct: 11  LPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIMSIYSILHSRKAPT 70

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+PN   Q  +LE+SIAYF LDLLH +LF P D +FI HHLA +YVF TC Y+VH GA 
Sbjct: 71  FASPNDTLQNTILEFSIAYFFLDLLHYLLFFPSDVLFILHHLATLYVFTTCRYVVHHGAY 130

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLY 184
            IL LL +AE++SGCQNVWTLA YRRAD  AAAK  DF+SP F+ FYS+ R  L P F++
Sbjct: 131 AILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVFRGFLGPLFMF 190

Query: 185 KMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRS 233
           K+G FY     +  IP+WAW+SWM VI +AI  S+LWV N W+ W R+
Sbjct: 191 KLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHRN 238

[Close]

BLAST of Cla022991 vs. NCBI nr
Match: gi|645230676|ref|XP_008222043.1| (PREDICTED: uncharacterized protein LOC103321970 [Prunus mume])

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-72
Identity = 134/228 (58.77%), Postives = 163/228 (71.49%), Query Frame = 1


Query: 5   LPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF +FLLIY FAY V+ RNWGPKHR EASSC ISLAHG    I++I +IL +     
Sbjct: 11  LPAFFSIFLLIYLFAYFVVFRNWGPKHRPEASSCLISLAHGPTAAIISIYSILHSHKAPT 70

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+PN  FQ  +LE+SIAYF LDLLH + F P D +FI HHLA +YVF TC Y+VH GA 
Sbjct: 71  FASPNDTFQNTILEFSIAYFFLDLLHYLFFFPSDVLFILHHLATLYVFTTCRYVVHHGAY 130

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLY 184
            IL LL +AE++SGCQNVWTLA YRRAD  AAAK  DF+SP F+ FYS+ R  L P F++
Sbjct: 131 AILVLLFLAEITSGCQNVWTLASYRRADSPAAAKLYDFLSPRFYVFYSVFRGFLGPLFMF 190

Query: 185 KMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRS 233
           K+G FY     +  IP+WAW+SWM VI +AI  S+LWV N W+ W R+
Sbjct: 191 KLGLFYASGAAEPKIPRWAWVSWMVVILIAIGLSILWVLNLWIDWHRN 238

[Close]

BLAST of Cla022991 vs. NCBI nr
Match: gi|658009886|ref|XP_008340168.1| (PREDICTED: uncharacterized protein LOC103403123 [Malus domestica])

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-72
Identity = 135/228 (59.21%), Postives = 164/228 (71.93%), Query Frame = 1


Query: 5   LPFFFFMFLLIYAFAYLVLLRNWGPKHRLEASSCFISLAHGSPVVIMAIIAILQAPNTTD 64
           LP FF +FLLIY  AY +L RNWGPKHR EASSC ISL+HGS    MA  AIL++   T 
Sbjct: 11  LPTFFSIFLLIYLSAYFLLFRNWGPKHRPEASSCLISLSHGSAAAAMAAHAILRSXKATT 70

Query: 65  FAAPNTKFQTLVLEYSIAYFLLDLLHCILFSPHDFVFIFHHLAVIYVFVTCNYLVHRGAV 124
           FA+PNT  Q  VLE+SIAYF LDLLH +LF P+D +FI HHLA +YVF TC Y V  GA 
Sbjct: 71  FASPNTDTQNTVLEFSIAYFSLDLLHYLLFFPNDVIFILHHLATLYVFTTCRYAVRHGAH 130

Query: 125 PILGLLVVAELSSGCQNVWTLAGYRRADVVAAAKFQDFVSPYFFTFYSILRVGLAPAFLY 184
            IL LL++AE++SGCQN WTLAG+RRA   AAAK  DF+SP F+ FYS+ R  L P F++
Sbjct: 131 AILVLLLLAEITSGCQNAWTLAGFRRAGSPAAAKLYDFLSPKFYAFYSVFRGILGPVFMF 190

Query: 185 KMGGFYVGSMGKDLIPKWAWISWMGVIGMAIFGSMLWVGNHWLLWFRS 233
           KMG FYV      +IP+WAW SWM VI +AI  S+LWV N W+ W+++
Sbjct: 191 KMGAFYVSGAADPVIPRWAWASWMVVISIAICLSILWVLNLWIDWYKN 238

The following BLAST results are available for this feature:

BLAST of Cla022991 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVB7_CUCSA	1.8e-108	79.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G590130 PE=4 SV=1	[more]
M5XG72_PRUPE	5.3e-73	59.21	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010551mg PE=4 SV=1	[more]
A0A061EEX7_THECC	3.8e-71	55.65	DNA-binding storekeeper protein-related OS=Theobroma cacao GN=TCM_010762 PE=4 SV...	[more]
A0A067GQK4_CITSI	4.4e-67	53.42	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025888mg PE=4 SV=1	[more]
V4VFR6_9ROSI	4.4e-67	53.42	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032558mg PE=4 SV=1	[more]

BLAST of Cla022991 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435460\|ref\|XP_004135513.1\|	2.5e-108	79.17	PREDICTED: uncharacterized protein LOC101219781 [Cucumis sativus]	[more]
gi\|659090562\|ref\|XP_008446083.1\|	4.3e-108	79.50	PREDICTED: uncharacterized protein LOC103488912 [Cucumis melo]	[more]
gi\|596203875\|ref\|XP_007223755.1\|	7.7e-73	59.21	hypothetical protein PRUPE_ppa010551mg [Prunus persica]	[more]
gi\|645230676\|ref\|XP_008222043.1\|	1.3e-72	58.77	PREDICTED: uncharacterized protein LOC103321970 [Prunus mume]	[more]
gi\|658009886\|ref\|XP_008340168.1\|	1.3e-72	59.21	PREDICTED: uncharacterized protein LOC103403123 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006634	TLC-dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU23621	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU28621	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU62612	watermelon EST collection version 2.0	transcribed_cluster
WMU73540	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022991	Cla022991.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU23621	WMU23621	transcribed_cluster
WMU73540	WMU73540	transcribed_cluster
WMU62612	WMU62612	transcribed_cluster
WMU28621	WMU28621	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006634	TRAM/LAG1/CLN8 homology domain	SMART	SM00724	lag1_27	coord: 30..234 score: 1.9
IPR006634	TRAM/LAG1/CLN8 homology domain	PROFILE	PS50922	TLC	coord: 30..220 score: 8
None	No IPR available	PANTHER	PTHR31766	FAMILY NOT NAMED	coord: 4..231 score: 2.6
None	No IPR available	PANTHER	PTHR31766:SF2	DNA-BINDING STOREKEEPER PROTEIN-LIKE PROTEIN-RELATED	coord: 4..231 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla022991	Cla97C11G219880	Watermelon (97103) v2	wmwmbB358
Cla022991	Csa5G590130	Cucumber (Chinese Long) v2	cuwmB432
Cla022991	MELO3C011890	Melon (DHL92) v3.5.1	mewmB077
Cla022991	ClCG11G013900	Watermelon (Charleston Gray)	wcgwmB103
Cla022991	CSPI05G21640	Wild cucumber (PI 183967)	cpiwmB444
Cla022991	Cucsa.075480	Cucumber (Gy14) v1	cgywmB080
Cla022991	CmaCh04G018170	Cucurbita maxima (Rimu)	cmawmB738
Cla022991	CmoCh04G019120	Cucurbita moschata (Rifu)	cmowmB732
Cla022991	Lsi04G006570	Bottle gourd (USVL1VR-Ls)	lsiwmB339
Cla022991	Cp4.1LG01g16050	Cucurbita pepo (Zucchini)	cpewmB463
Cla022991	MELO3C011890.2	Melon (DHL92) v3.6.1	medwmB076
Cla022991	Carg14276	Silver-seed gourd	carwmB0234
Cla022991	CsaV3_5G030510	Cucumber (Chinese Long) v3	cucwmB458
Cla022991	Bhi07G001506	Wax gourd	wgowmB568

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None