MELO3C011390 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011390
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRing finger protein, putative
Locationchr3 : 24066075 .. 24066581 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCGCCCACCCTCCTTCCTCCCCCGCCACCGGTGTCGGTCTCGGCTACGGCATTGCCATTGCCGTCAGCATCCTCGTCTTCATCTCCACCGTCATGCTCATCTCCTACGCCTGCATTCGCGTCAAATCCAGTACTCGTCCCCGTCCTCGTCCCTCCGCTAATTCCCTCCCCTCTCCCCCTGCGGCCACCGTCGACAATGTGGTGGTCCTCATGGTTGGATTAGACGGCTCCATCATCGAATCTTACCCTAAATTGGTCCTCGGAGAGAGTCGTCGTCTTCCTCCCCCTAACAATGGCCCTTGCTCCATTTGCCTCTCTGATTACAAGCCCCACGATTCTGTTCGATGCATTCCCGATTGTCGACATTGTTTTCACTCCGATTGCGTCGATGAATGGCTTCGTATGAGCGCTACTTGTCCTTTGTGTCGAAATTCCCCAGCTCCAACCCCCGTTGCTACTCCTCTCTCTGAATTCGTGCCTCTGGCTTCCCATGCTAGGTGA

mRNA sequence

ATGTCCTCCGCCCACCCTCCTTCCTCCCCCGCCACCGGTGTCGGTCTCGGCTACGGCATTGCCATTGCCGTCAGCATCCTCGTCTTCATCTCCACCGTCATGCTCATCTCCTACGCCTGCATTCGCGTCAAATCCAGTACTCGTCCCCGTCCTCGTCCCTCCGCTAATTCCCTCCCCTCTCCCCCTGCGGCCACCGTCGACAATGTGGTGGTCCTCATGGTTGGATTAGACGGCTCCATCATCGAATCTTACCCTAAATTGGTCCTCGGAGAGAGTCGTCGTCTTCCTCCCCCTAACAATGGCCCTTGCTCCATTTGCCTCTCTGATTACAAGCCCCACGATTCTGTTCGATGCATTCCCGATTGTCGACATTGTTTTCACTCCGATTGCGTCGATGAATGGCTTCGTATGAGCGCTACTTGTCCTTTGTGTCGAAATTCCCCAGCTCCAACCCCCGTTGCTACTCCTCTCTCTGAATTCGTGCCTCTGGCTTCCCATGCTAGGTGA

Coding sequence (CDS)

ATGTCCTCCGCCCACCCTCCTTCCTCCCCCGCCACCGGTGTCGGTCTCGGCTACGGCATTGCCATTGCCGTCAGCATCCTCGTCTTCATCTCCACCGTCATGCTCATCTCCTACGCCTGCATTCGCGTCAAATCCAGTACTCGTCCCCGTCCTCGTCCCTCCGCTAATTCCCTCCCCTCTCCCCCTGCGGCCACCGTCGACAATGTGGTGGTCCTCATGGTTGGATTAGACGGCTCCATCATCGAATCTTACCCTAAATTGGTCCTCGGAGAGAGTCGTCGTCTTCCTCCCCCTAACAATGGCCCTTGCTCCATTTGCCTCTCTGATTACAAGCCCCACGATTCTGTTCGATGCATTCCCGATTGTCGACATTGTTTTCACTCCGATTGCGTCGATGAATGGCTTCGTATGAGCGCTACTTGTCCTTTGTGTCGAAATTCCCCAGCTCCAACCCCCGTTGCTACTCCTCTCTCTGAATTCGTGCCTCTGGCTTCCCATGCTAGGTGA

Protein sequence

MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPSPPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR*
Homology
[Close]
BLAST of MELO3C011390 vs. Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.9e-54
Identity = 106/164 (64.63%), Postives = 120/164 (73.17%), Query Frame = 1 

Query: 6   PPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSAN-SLPSPPAA 65
           P S PA+GVGLGYGIAIAVSILV IS +ML SY CIR KS+ R          LPSP A 
Sbjct: 3   PISPPASGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE 62

Query: 66  TVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPDCRH 125
                  + +GLD  +IESYP++VLG+SRRLP PNNGPCSICL DY+  + VRCIP+C H
Sbjct: 63  -------VKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNH 122

Query: 126 CFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 169
           CFH+DCVDEWLR SATCPLCRNSPAP+ +ATPLS+ VPLA   R
Sbjct: 123 CFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR 159

[Close]
BLAST of MELO3C011390 vs. Swiss-Prot
Match: ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.7e-29
Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 1 

Query: 15  GLGYGIAIAVSILVFISTVMLISYACIRVKSS--------TRPRPRPSANSLPSPPAA-- 74
           GL YGI +++ IL+ I+T+ L SY C R   S        TR R R S  +LP       
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 75  ----TVDNVVVLMVGLDGSIIESYPKLVLGESR-----RLPPPNNGPCSICLSDYKPHDS 134
                 D VVV ++GL   +I+ +PKL   E+R     +        CSICL+DYK  D 
Sbjct: 82  FEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDM 141

Query: 135 VRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLA 165
           +R +PDC H FH +CVD WLR+  TCP+CR SP P+P  TP+++ VP +
Sbjct: 142 IRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFS 190

[Close]
BLAST of MELO3C011390 vs. Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-29
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 1 

Query: 15  GLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPSPPAATVDNVVVLMV 74
           G  YGI +++ +L+ I+T+ L SY C R + S+ P      ++        V  ++ ++ 
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHV--IIDVVP 122

Query: 75  GLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPDCRHCFHSDCVDEW 134
           GLD   I+SYPK++  E++   P     C+ICL DYK    +R +PDC H FH  C+D W
Sbjct: 123 GLDEDTIQSYPKILYSEAKG--PTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTW 182

Query: 135 LRMSATCPLCRNSPAPTPVATPLSEFVPLAS 166
           LR++ TCP+CR SP PTP++TPL+E VPLAS
Sbjct: 183 LRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]
BLAST of MELO3C011390 vs. Swiss-Prot
Match: ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-27
Identity = 73/193 (37.82%), Postives = 100/193 (51.81%), Query Frame = 1 

Query: 6   PPSSPA----TGVGLGYGIAIAVSILVFISTVMLISYACIRVKSS--TRPRPRPSANSLP 65
           PP  P     T +GLGY IAIA+  LV IST++L SY C R      +      +AN+  
Sbjct: 12  PPPVPIPTYITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASF 71

Query: 66  SPPAATVDNVV------------VLMVGLDGSIIESYPK---------LVLGESRRLPPP 125
           S     V  ++            V++ GLD S+I SYPK         +V G+       
Sbjct: 72  SDRGVIVPRIIFVAEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEG 131

Query: 126 NNGPCSICLSDYKPHDSVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPVA 168
               CSICL +Y   + +R +P+C+H FH  C+D WL+++ +CP+CRNSP P    TP +
Sbjct: 132 RETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQS 191

[Close]
BLAST of MELO3C011390 vs. Swiss-Prot
Match: ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-26
Identity = 72/189 (38.10%), Postives = 102/189 (53.97%), Query Frame = 1 

Query: 6   PPSSPATG-------VGLGYGIAIAVSILVFISTVMLISYACIRV---KSSTRPRPRPSA 65
           PPS P  G       +G GY IAIA+  LV +STV+L SY C R    +++         
Sbjct: 18  PPSPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVESTGDRG 77

Query: 66  NSLPSPP---AATVDNVVV----LMVGLDGSIIESYPKLVLGESRRLPPPN------NGP 125
            S+  P     A  DN  +    ++VGLD ++I SYPK    +       +      +  
Sbjct: 78  GSVILPRIIFVAEEDNEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTT 137

Query: 126 CSICLSDYKPHDSVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPVATPLS 168
           CSICL +YK  + +R +P+C+H FH  C+D WL+++ +CP+CRNSP P    TP++TPLS
Sbjct: 138 CSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPLS 197

[Close]
BLAST of MELO3C011390 vs. TrEMBL
Match: A0A0A0KFY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401350 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.9e-81
Identity = 154/168 (91.67%), Postives = 158/168 (94.05%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS 60
           MSSAHPPSSPATG+GLGYGIAIAVSILVFISTVMLISYACIRVKS+T    RPSA SLPS
Sbjct: 1   MSSAHPPSSPATGLGLGYGIAIAVSILVFISTVMLISYACIRVKSATT---RPSA-SLPS 60

Query: 61  PPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP 120
           PP   VDNVVVLMVGL GSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP
Sbjct: 61  PPTP-VDNVVVLMVGLHGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP 120

Query: 121 DCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 169
           DCRHCFHSDCVD+WLRMSATCPLCRNSPAPTP+ATPLSE VPLASHAR
Sbjct: 121 DCRHCFHSDCVDQWLRMSATCPLCRNSPAPTPLATPLSELVPLASHAR 163

[Close]
BLAST of MELO3C011390 vs. TrEMBL
Match: A0A067L8Z0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24568 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 2.0e-58
Identity = 117/174 (67.24%), Postives = 132/174 (75.86%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS 60
           MS+A PP S ATGVGLGYGIAIAVSILV IST+ML SYAC+RVK S R R     N   +
Sbjct: 1   MSTADPPVS-ATGVGLGYGIAIAVSILVLISTIMLASYACVRVKGSLRDRSNNGDNDDDT 60

Query: 61  PP----AATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSV 120
            P       +    +L++GLDG  IESYPK+VLGESRRLP PNNGPCSICLSDYKP D++
Sbjct: 61  DPYRHNRQFMTGEPMLVIGLDGPQIESYPKMVLGESRRLPKPNNGPCSICLSDYKPKDTL 120

Query: 121 RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPVATPLSEFVPLASH 167
           RCIP C HCFH+DCVDEWL+MSATCPLCRNSP P    TP+ATPLSE  PL+ H
Sbjct: 121 RCIPACHHCFHADCVDEWLKMSATCPLCRNSPTPSAVSTPIATPLSELAPLSFH 173

[Close]
BLAST of MELO3C011390 vs. TrEMBL
Match: D7TX41_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00140 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.8e-57
Identity = 115/175 (65.71%), Postives = 137/175 (78.29%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRP---RPSANS 60
           MS+A PP S A GVGLGYGIAIAVSILV IST+ML SYAC+RVK+S   R    RP  N 
Sbjct: 1   MSTATPPES-AAGVGLGYGIAIAVSILVLISTIMLASYACVRVKASGGTRADHGRPGTNR 60

Query: 61  LPSPPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVR 120
             +    +    VV++ GLDG  IESYPK+VLG+SRRLP PN+GPCSICLS+Y+P+++VR
Sbjct: 61  ESTAVDLSELAAVVVVAGLDGPAIESYPKMVLGQSRRLPRPNDGPCSICLSEYRPNETVR 120

Query: 121 CIPDCRHCFHSDCVDEWLRMSATCPLCRNSP----APTPVATPLSEFVPLASHAR 169
            IP+C HCFH+DC+DEWLRMSATCP+CR+SP    APTP+ATPLSE VPLA HAR
Sbjct: 121 SIPECNHCFHADCIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174

[Close]
BLAST of MELO3C011390 vs. TrEMBL
Match: A0A0D2UIN7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G215700 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.1e-55
Identity = 113/179 (63.13%), Postives = 133/179 (74.30%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSS---TRPRPRPSA-N 60
           MS+A PP S  TGVGLGYGIAIAVSILV IST+ML SYAC+RVK+S    R R   +  N
Sbjct: 1   MSTADPPIS-TTGVGLGYGIAIAVSILVLISTIMLASYACVRVKASGSGNRSRRNSNGGN 60

Query: 61  SLPSPPAATVDN---VVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPH 120
           S  +    T D+   V  ++VGLDG +IESYPK+++GESRRLP PNNGPC ICL++Y+P 
Sbjct: 61  SNGTSRGITEDDSMDVATVVVGLDGPVIESYPKIIVGESRRLPKPNNGPCCICLTEYQPK 120

Query: 121 DSVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPA----PTPVATPLSEFVPLASHAR 169
           D +RCIPDC HCFH DC+DEWLRM+ TCPLCRNSPA    PTP  TPLS  VPLA + R
Sbjct: 121 DQIRCIPDCEHCFHVDCIDEWLRMNGTCPLCRNSPAPSQGPTPSTTPLSALVPLAFNGR 178

[Close]
BLAST of MELO3C011390 vs. TrEMBL
Match: V4SXV0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003203mg PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.9e-55
Identity = 115/181 (63.54%), Postives = 139/181 (76.80%), Query Frame = 1 

Query: 1   MSSAHPP------SSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTR----PR 60
           MS+A+PP      ++  TGVGLGYGIAIAVSILV IST+ML SYACIRVK++        
Sbjct: 1   MSTANPPVVASTAATTTTGVGLGYGIAIAVSILVLISTIMLASYACIRVKANANRGGGSG 60

Query: 61  PRPSANSLPSPPAATVDNVV--VLMVGLDGSIIESYPKLVLGESRRLPPPNN-GPCSICL 120
              S+NS P+P    VD+ +  VL++GLDG++I ++PK++LGES R+P PN+ GPCSICL
Sbjct: 61  GGSSSNSNPTPNFDAVDSGLAGVLVLGLDGTVINTFPKIILGESMRMPGPNDYGPCSICL 120

Query: 121 SDYKPHDSVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHA 169
            DYKP DSVRCIPDC HCFH+DCVDEWLRMSATCPLCR+SP     ATPL+E VPLASHA
Sbjct: 121 CDYKPKDSVRCIPDCHHCFHADCVDEWLRMSATCPLCRSSP-----ATPLAEVVPLASHA 176

[Close]
BLAST of MELO3C011390 vs. TAIR10
Match: AT5G07040.1 (AT5G07040.1 RING/U-box superfamily protein)

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-55
Identity = 106/164 (64.63%), Postives = 120/164 (73.17%), Query Frame = 1 

Query: 6   PPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSAN-SLPSPPAA 65
           P S PA+GVGLGYGIAIAVSILV IS +ML SY CIR KS+ R          LPSP A 
Sbjct: 3   PISPPASGVGLGYGIAIAVSILVLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAE 62

Query: 66  TVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPDCRH 125
                  + +GLD  +IESYP++VLG+SRRLP PNNGPCSICL DY+  + VRCIP+C H
Sbjct: 63  -------VKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNH 122

Query: 126 CFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 169
           CFH+DCVDEWLR SATCPLCRNSPAP+ +ATPLS+ VPLA   R
Sbjct: 123 CFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLAFQIR 159

[Close]
BLAST of MELO3C011390 vs. TAIR10
Match: AT5G06490.1 (AT5G06490.1 RING/U-box superfamily protein)

HSP 1 Score: 130.6 bits (327), Expect = 9.3e-31
Identity = 69/169 (40.83%), Postives = 92/169 (54.44%), Query Frame = 1 

Query: 15  GLGYGIAIAVSILVFISTVMLISYACIRVKSS--------TRPRPRPSANSLPSPPAA-- 74
           GL YGI +++ IL+ I+T+ L SY C R   S        TR R R S  +LP       
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 75  ----TVDNVVVLMVGLDGSIIESYPKLVLGESR-----RLPPPNNGPCSICLSDYKPHDS 134
                 D VVV ++GL   +I+ +PKL   E+R     +        CSICL+DYK  D 
Sbjct: 82  FEDDESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSCCSICLADYKKMDM 141

Query: 135 VRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLA 165
           +R +PDC H FH +CVD WLR+  TCP+CR SP P+P  TP+++ VP +
Sbjct: 142 IRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFS 190

[Close]
BLAST of MELO3C011390 vs. TAIR10
Match: AT2G35910.1 (AT2G35910.1 RING/U-box superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-30
Identity = 63/151 (41.72%), Postives = 91/151 (60.26%), Query Frame = 1 

Query: 15  GLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPSPPAATVDNVVVLMV 74
           G  YGI +++ +L+ I+T+ L SY C R + S+ P      ++        V  ++ ++ 
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSSPSQTNQDSTRIHHHHHHV--IIDVVP 122

Query: 75  GLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPDCRHCFHSDCVDEW 134
           GLD   I+SYPK++  E++   P     C+ICL DYK    +R +PDC H FH  C+D W
Sbjct: 123 GLDEDTIQSYPKILYSEAKG--PTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTW 182

Query: 135 LRMSATCPLCRNSPAPTPVATPLSEFVPLAS 166
           LR++ TCP+CR SP PTP++TPL+E VPLAS
Sbjct: 183 LRLNPTCPVCRTSPLPTPLSTPLAEVVPLAS 209

[Close]
BLAST of MELO3C011390 vs. TAIR10
Match: AT5G53110.1 (AT5G53110.1 RING/U-box superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.5e-30
Identity = 61/147 (41.50%), Postives = 89/147 (60.54%), Query Frame = 1 

Query: 2   SSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPSP 61
           S  H P+ P       Y IA+   I   +    L  +   ++ S  + R       + + 
Sbjct: 233 SHVHKPAIPRRA---RYAIAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNA 292

Query: 62  PAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPD 121
            A  + + V++M GLDG  IESYPK+VLGES+RLP  ++  C+ICLS+Y+P +++R IP 
Sbjct: 293 QAHYLHSSVIVM-GLDGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQ 352

Query: 122 CRHCFHSDCVDEWLRMSATCPLCRNSP 149
           C+HCFH+DC+DEWL+++ TCP+CRNSP
Sbjct: 353 CQHCFHADCIDEWLKLNGTCPVCRNSP 375

[Close]
BLAST of MELO3C011390 vs. TAIR10
Match: AT3G61550.1 (AT3G61550.1 RING/U-box superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-28
Identity = 73/193 (37.82%), Postives = 100/193 (51.81%), Query Frame = 1 

Query: 6   PPSSPA----TGVGLGYGIAIAVSILVFISTVMLISYACIRVKSS--TRPRPRPSANSLP 65
           PP  P     T +GLGY IAIA+  LV IST++L SY C R      +      +AN+  
Sbjct: 12  PPPVPIPTYITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASF 71

Query: 66  SPPAATVDNVV------------VLMVGLDGSIIESYPK---------LVLGESRRLPPP 125
           S     V  ++            V++ GLD S+I SYPK         +V G+       
Sbjct: 72  SDRGVIVPRIIFVAEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEG 131

Query: 126 NNGPCSICLSDYKPHDSVRCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPVA 168
               CSICL +Y   + +R +P+C+H FH  C+D WL+++ +CP+CRNSP P    TP +
Sbjct: 132 RETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQS 191

[Close]
BLAST of MELO3C011390 vs. NCBI nr
Match: gi|659089237|ref|XP_008445399.1| (PREDICTED: putative RING-H2 finger protein ATL69 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 2.1e-93
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS 60
           MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS
Sbjct: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS 60

Query: 61  PPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP 120
           PPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP
Sbjct: 61  PPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP 120

Query: 121 DCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 169
           DCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR
Sbjct: 121 DCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 168

[Close]
BLAST of MELO3C011390 vs. NCBI nr
Match: gi|449458135|ref|XP_004146803.1| (PREDICTED: putative RING-H2 finger protein ATL69 [Cucumis sativus])

HSP 1 Score: 308.5 bits (789), Expect = 7.1e-81
Identity = 154/168 (91.67%), Postives = 158/168 (94.05%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS 60
           MSSAHPPSSPATG+GLGYGIAIAVSILVFISTVMLISYACIRVKS+T    RPSA SLPS
Sbjct: 1   MSSAHPPSSPATGLGLGYGIAIAVSILVFISTVMLISYACIRVKSATT---RPSA-SLPS 60

Query: 61  PPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP 120
           PP   VDNVVVLMVGL GSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP
Sbjct: 61  PPTP-VDNVVVLMVGLHGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIP 120

Query: 121 DCRHCFHSDCVDEWLRMSATCPLCRNSPAPTPVATPLSEFVPLASHAR 169
           DCRHCFHSDCVD+WLRMSATCPLCRNSPAPTP+ATPLSE VPLASHAR
Sbjct: 121 DCRHCFHSDCVDQWLRMSATCPLCRNSPAPTPLATPLSELVPLASHAR 163

[Close]
BLAST of MELO3C011390 vs. NCBI nr
Match: gi|1009118788|ref|XP_015876036.1| (PREDICTED: putative RING-H2 finger protein ATL69 [Ziziphus jujuba])

HSP 1 Score: 240.0 bits (611), Expect = 3.1e-60
Identity = 119/173 (68.79%), Postives = 139/173 (80.35%), Query Frame = 1 

Query: 2   SSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPSP 61
           + A PP SP TGVGLGYGIAIAVSILV IST+ML SYAC+RVK+S   R     N LP+ 
Sbjct: 4   AGADPPFSP-TGVGLGYGIAIAVSILVLISTIMLASYACVRVKASGAAR----RNRLPTT 63

Query: 62  PAATVDNV--VVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCI 121
              T+ +   VVL++GLDGSIIESYPK+V+GESRRLP PN GPCSICLS+Y+P+DS+RCI
Sbjct: 64  TTTTITSSEPVVLVMGLDGSIIESYPKIVVGESRRLPKPNEGPCSICLSEYQPNDSLRCI 123

Query: 122 PDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPVATPLSEFVPLASHAR 169
           P+C HCFHSDC+DEWLRM+ATCP+CRNSPAP    TP+ATP SE VPLA H R
Sbjct: 124 PECNHCFHSDCIDEWLRMTATCPMCRNSPAPSSANTPLATPQSELVPLAFHVR 171

[Close]
BLAST of MELO3C011390 vs. NCBI nr
Match: gi|802574225|ref|XP_012068725.1| (PREDICTED: putative RING-H2 finger protein ATL69 [Jatropha curcas])

HSP 1 Score: 233.4 bits (594), Expect = 2.9e-58
Identity = 117/174 (67.24%), Postives = 132/174 (75.86%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRPRPSANSLPS 60
           MS+A PP S ATGVGLGYGIAIAVSILV IST+ML SYAC+RVK S R R     N   +
Sbjct: 1   MSTADPPVS-ATGVGLGYGIAIAVSILVLISTIMLASYACVRVKGSLRDRSNNGDNDDDT 60

Query: 61  PP----AATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSV 120
            P       +    +L++GLDG  IESYPK+VLGESRRLP PNNGPCSICLSDYKP D++
Sbjct: 61  DPYRHNRQFMTGEPMLVIGLDGPQIESYPKMVLGESRRLPKPNNGPCSICLSDYKPKDTL 120

Query: 121 RCIPDCRHCFHSDCVDEWLRMSATCPLCRNSPAP----TPVATPLSEFVPLASH 167
           RCIP C HCFH+DCVDEWL+MSATCPLCRNSP P    TP+ATPLSE  PL+ H
Sbjct: 121 RCIPACHHCFHADCVDEWLKMSATCPLCRNSPTPSAVSTPIATPLSELAPLSFH 173

[Close]
BLAST of MELO3C011390 vs. NCBI nr
Match: gi|225464029|ref|XP_002266804.1| (PREDICTED: putative RING-H2 finger protein ATL69 [Vitis vinifera])

HSP 1 Score: 229.2 bits (583), Expect = 5.4e-57
Identity = 115/175 (65.71%), Postives = 137/175 (78.29%), Query Frame = 1 

Query: 1   MSSAHPPSSPATGVGLGYGIAIAVSILVFISTVMLISYACIRVKSSTRPRP---RPSANS 60
           MS+A PP S A GVGLGYGIAIAVSILV IST+ML SYAC+RVK+S   R    RP  N 
Sbjct: 1   MSTATPPES-AAGVGLGYGIAIAVSILVLISTIMLASYACVRVKASGGTRADHGRPGTNR 60

Query: 61  LPSPPAATVDNVVVLMVGLDGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVR 120
             +    +    VV++ GLDG  IESYPK+VLG+SRRLP PN+GPCSICLS+Y+P+++VR
Sbjct: 61  ESTAVDLSELAAVVVVAGLDGPAIESYPKMVLGQSRRLPRPNDGPCSICLSEYRPNETVR 120

Query: 121 CIPDCRHCFHSDCVDEWLRMSATCPLCRNSP----APTPVATPLSEFVPLASHAR 169
            IP+C HCFH+DC+DEWLRMSATCP+CR+SP    APTP+ATPLSE VPLA HAR
Sbjct: 121 SIPECNHCFHADCIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174

The following BLAST results are available for this feature:
BLAST of MELO3C011390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL69_ARATH1.9e-5464.63Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1[more]
ATL71_ARATH1.7e-2940.83Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1[more]
ATL70_ARATH2.8e-2941.72RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1[more]
ATL68_ARATH4.5e-2737.82RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1[more]
ATL67_ARATH1.3e-2638.10RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1[more]
BLAST of MELO3C011390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFY2_CUCSA4.9e-8191.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401350 PE=4 SV=1[more]
A0A067L8Z0_JATCU2.0e-5867.24Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24568 PE=4 SV=1[more]
D7TX41_VITVI3.8e-5765.71Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0084g00140 PE=4 SV=... [more]
A0A0D2UIN7_GOSRA6.1e-5563.13Uncharacterized protein OS=Gossypium raimondii GN=B456_010G215700 PE=4 SV=1[more]
V4SXV0_9ROSI7.9e-5563.54Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003203mg PE=4 SV=1[more]
BLAST of MELO3C011390 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G07040.11.1e-5564.63 RING/U-box superfamily protein[more]
AT5G06490.19.3e-3140.83 RING/U-box superfamily protein[more]
AT2G35910.11.6e-3041.72 RING/U-box superfamily protein[more]
AT5G53110.13.5e-3041.50 RING/U-box superfamily protein[more]
AT3G61550.12.5e-2837.82 RING/U-box superfamily protein[more]
BLAST of MELO3C011390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089237|ref|XP_008445399.1|2.1e-93100.00PREDICTED: putative RING-H2 finger protein ATL69 [Cucumis melo][more]
gi|449458135|ref|XP_004146803.1|7.1e-8191.67PREDICTED: putative RING-H2 finger protein ATL69 [Cucumis sativus][more]
gi|1009118788|ref|XP_015876036.1|3.1e-6068.79PREDICTED: putative RING-H2 finger protein ATL69 [Ziziphus jujuba][more]
gi|802574225|ref|XP_012068725.1|2.9e-5867.24PREDICTED: putative RING-H2 finger protein ATL69 [Jatropha curcas][more]
gi|225464029|ref|XP_002266804.1|5.4e-5765.71PREDICTED: putative RING-H2 finger protein ATL69 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011390T1MELO3C011390T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 103..145
score: 6.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 103..144
score: 8.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 103..145
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 102..146
score: 9.0
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 8..166
score: 1.2
NoneNo IPR availablePANTHERPTHR14155:SF157RING-H2 FINGER PROTEIN ATL69-RELATEDcoord: 8..166
score: 1.2
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 98..150
score: 1.22