MELO3C009575 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C009575
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	VQ motif family protein
Location	chr4 : 29887186 .. 29887721 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCAAGAAGAAGACTGAAAAATCTCACCAATTTTCGAAGCCGCAGCGGGAAATTGAAGAAAAATGATGATGAATTTCACCGCCGCAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCGTTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAATCCTAATCAACGCAATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACCGGAAATCGATCCTCTGTAGCCGTCGTCGCGTCGTCCTGTTCTGCTAGTGGAATGATTACGGATCATTCTGGTGAGGAATTTGCATCCGCGTGCAATTGCATTCCGTCGTAGCTTCCGCCGTGGATCCGTCGTCGGTTCGGTGTTATTTGTAGGTGTAGCCGAGAGAGTGGTTTAGTATCATTGATTCTTAGTTGTATATGATTATTCCTAAGATATAATTTTCTTAATATATTATAATCGAATTACATAATTTT

mRNA sequence

ATTCAAGAAGAAGACTGAAAAATCTCACCAATTTTCGAAGCCGCAGCGGGAAATTGAAGAAAAATGATGATGAATTTCACCGCCGCAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCGTTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAATCCTAATCAACGCAATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACCGGAAATCGATCCTCTGTAGCCGTCGTCGCGTCGTCCTGTTCTGCTAGTGGAATGATTACGGATCATTCTGGTGAGGAATTTGCATCCGCGTGCAATTGCATTCCGTCGTAGCTTCCGCCGTGGATCCGTCGTCGGTTCGGTGTTATTTGTAGGTGTAGCCGAGAGAGTGGTTTAGTATCATTGATTCTTAGTTGTATATGATTATTCCTAAGATATAATTTTCTTAATATATTATAATCGAATTACATAATTTT

Coding sequence (CDS)

ATGATGATGAATTTCACCGCCGCAAGGAATCAATCGCAATTGCGAGGGCCAAGGCCGCCGCCGTTGACGGTGAACAAATCCTCCACTAACATTTTCAAGAAATCGACGAAGAATCCTAATCAACGCAATCGCCGTTCTCCGATAATCATTTACCTCCGATCGCCGAAGATCATCCATGTTCGGCCTGAGGAGTTCAAAAGCTTCGTTCAACGTCTCACCGGAAATCGATCCTCTGTAGCCGTCGTCGCGTCGTCCTGTTCTGCTAGTGGAATGATTACGGATCATTCTGGTGAGGAATTTGCATCCGCGTGCAATTGCATTCCGTCGTAG

Protein sequence

MMMNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS*

Homology

[Close]

BLAST of MELO3C009575 vs. Swiss-Prot
Match: MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-08
Identity = 34/79 (43.04%), Postives = 43/79 (54.43%), Query Frame = 1


Query: 9  RNQSQLRGPRPPPLTVNKSSTNIFK--KSTKNPNQRNR------RSPIIIYLRSPKIIHV 68
          + Q Q+ GPRP PL+V+K S  I K  K    P  R++      R P++IY  SPK++H 
Sbjct: 19 KRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHA 78

Query: 69 RPEEFKSFVQRLTGNRSSV 80
             EF + VQRLTG  S V
Sbjct: 79 TASEFMNVVQRLTGISSGV 97

[Close]

BLAST of MELO3C009575 vs. Swiss-Prot
Match: VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-07
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 1


Query: 12 SQLRGPRPPPLTVNKSSTNIFKKST--KNPNQRNRRSPIIIYLRSPKIIHVRPEEFKSFV 71
          +++ G RP  L +   S  I K S+    P    R SP+IIY  SPK+IH R E+F + V
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALV 66

Query: 72 QRLTGNRSSVAVVASSCSAS 90
          QRLTG    +    S  S+S
Sbjct: 67 QRLTGLDEIIRRNTSESSSS 86

[Close]

BLAST of MELO3C009575 vs. TrEMBL
Match: A0A0A0LEW5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G785410 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 3.6e-40
Identity = 93/115 (80.87%), Postives = 97/115 (84.35%), Query Frame = 1


Query: 1   MMMNFTAARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRS 60
           MM+   AARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 110
           PK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112

[Close]

BLAST of MELO3C009575 vs. TrEMBL
Match: A0A0B2QR10_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_037734 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 9.8e-14
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 3   MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 62
           MN  A   Q QL+GP+P  L +N++ST I KK  ++    +  SP+I++L+SPK+IHVRP
Sbjct: 1   MNSQATSRQKQLQGPKPASLMINRNSTKISKKQKQH---LSHHSPVIVHLKSPKVIHVRP 60

Query: 63  EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF 101
           EEF S VQ+LT N  S A  A     S  + ++  E+F
Sbjct: 61  EEFMSLVQQLTRNPVSAAFAAPKMDKSSTVVENPIEDF 95

[Close]

BLAST of MELO3C009575 vs. TrEMBL
Match: I1JQC4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G204900 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-13
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 3   MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 62
           MN  A   Q QL+GP+P  L +N++ST I KK  ++    +  SP+I++L+SPK+IHVRP
Sbjct: 1   MNSQATSRQKQLQGPKPASLMINRNSTKINKKQKQH---LSHHSPVIVHLKSPKVIHVRP 60

Query: 63  EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF 101
           EEF S VQ+LT N  S A  A     S  + ++  E+F
Sbjct: 61  EEFMSLVQQLTRNPVSAAFAAPKMDKSSTVVENPIEDF 95

[Close]

BLAST of MELO3C009575 vs. TrEMBL
Match: W9STZ0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006437 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-13
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 1


Query: 14  LRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLT 73
           L+GPRP PLT+++SS  I K   + P       PI++YLRSPKIIHVRPEEF S VQ+LT
Sbjct: 8   LQGPRPTPLTISRSSAKITKIKQRAP------PPIVVYLRSPKIIHVRPEEFMSLVQQLT 67

Query: 74  GNRSSVAVVASSCSASGMITDHSGEEFASACN 106
           GN   ++  +++ +  G      GEEF S  N
Sbjct: 68  GNHPKISASSATRNIEGQ-NKFYGEEFTSRVN 92

[Close]

BLAST of MELO3C009575 vs. TrEMBL
Match: A0A0B2SA13_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_002174 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-13
Identity = 41/83 (49.40%), Postives = 56/83 (67.47%), Query Frame = 1


Query: 3  MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 62
          MN  AA    QL+GP+P  L +N++ST I    +K     +  SP+I++L+SPK+IHVRP
Sbjct: 1  MNSQAASRHKQLQGPKPASLIINRNSTKI----SKQKQHLSHHSPVIVHLKSPKVIHVRP 60

Query: 63 EEFKSFVQRLTGNRSSVAVVASS 86
          EEF S VQ+LTGN  S A VA++
Sbjct: 61 EEFMSLVQQLTGNPVSAAAVAAN 79

[Close]

BLAST of MELO3C009575 vs. TAIR10
Match: AT3G18690.1 (AT3G18690.1 MAP kinase substrate 1)

HSP 1 Score: 58.9 bits (141), Expect = 2.2e-09
Identity = 34/79 (43.04%), Postives = 43/79 (54.43%), Query Frame = 1


Query: 9  RNQSQLRGPRPPPLTVNKSSTNIFK--KSTKNPNQRNR------RSPIIIYLRSPKIIHV 68
          + Q Q+ GPRP PL+V+K S  I K  K    P  R++      R P++IY  SPK++H 
Sbjct: 19 KRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVHA 78

Query: 69 RPEEFKSFVQRLTGNRSSV 80
             EF + VQRLTG  S V
Sbjct: 79 TASEFMNVVQRLTGISSGV 97

[Close]

BLAST of MELO3C009575 vs. TAIR10
Match: AT1G68450.1 (AT1G68450.1 VQ motif-containing protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-08
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 1


Query: 12 SQLRGPRPPPLTVNKSSTNIFKKST--KNPNQRNRRSPIIIYLRSPKIIHVRPEEFKSFV 71
          +++ G RP  L +   S  I K S+    P    R SP+IIY  SPK+IH R E+F + V
Sbjct: 7  NEINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALV 66

Query: 72 QRLTGNRSSVAVVASSCSAS 90
          QRLTG    +    S  S+S
Sbjct: 67 QRLTGLDEIIRRNTSESSSS 86

[Close]

BLAST of MELO3C009575 vs. TAIR10
Match: AT1G21326.1 (AT1G21326.1 VQ motif-containing protein)

HSP 1 Score: 53.5 bits (127), Expect = 9.4e-08
Identity = 35/90 (38.89%), Postives = 43/90 (47.78%), Query Frame = 1


Query: 16  GPRPPPLTVNKSSTNIFKKSTKNP----------------NQRNRRSPIIIYLRSPKIIH 75
           GPRP PL V   S  I KK    P                  R    P+IIY  SP+IIH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSAS 90
             P  F + VQRLTG ++S +  +SS S+S
Sbjct: 73  THPNNFMTLVQRLTG-KTSTSTTSSSYSSS 101

[Close]

BLAST of MELO3C009575 vs. TAIR10
Match: AT1G21320.1 (AT1G21320.1 nucleotide binding;nucleic acid binding)

HSP 1 Score: 50.8 bits (120), Expect = 6.1e-07
Identity = 33/97 (34.02%), Postives = 42/97 (43.30%), Query Frame = 1


Query: 16  GPRPPPLTVNKSSTNIFKKSTKNP----------------NQRNRRSPIIIYLRSPKIIH 75
           GP+P PL V   S  I KK    P                  R    P+ IY  +P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 76  VRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHS 97
             P  F + VQRLTG  S+    +SS S++    D S
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTS 109

[Close]

BLAST of MELO3C009575 vs. TAIR10
Match: AT3G18360.1 (AT3G18360.1 VQ motif-containing protein)

HSP 1 Score: 50.8 bits (120), Expect = 6.1e-07
Identity = 26/60 (43.33%), Postives = 34/60 (56.67%), Query Frame = 1


Query: 17  PRPPPLTVNKSSTNIFKKSTKNP--NQRNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLTG 75
           P PP L VNK S  I K  + +   +    R P+IIY  +P+IIH  P++F + VQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of MELO3C009575 vs. NCBI nr
Match: gi|659085780|ref|XP_008443599.1| (PREDICTED: protein MKS1-like [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 1.8e-53
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1


Query: 3   MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 62
           MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP
Sbjct: 1   MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 60

Query: 63  EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 110
           EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS
Sbjct: 61  EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 107

[Close]

BLAST of MELO3C009575 vs. NCBI nr
Match: gi|700204114|gb|KGN59247.1| (hypothetical protein Csa_3G785410 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 5.1e-40
Identity = 93/115 (80.87%), Postives = 97/115 (84.35%), Query Frame = 1


Query: 1   MMMNFTAARNQSQLRGPRPPPLTVNKSS-TNIFKKSTKN-----PNQRNRRSPIIIYLRS 60
           MM+   AARN SQLRGPRPPPLTVNKSS TNI KKSTKN      NQR+RRSPIIIYLRS
Sbjct: 1   MMITSAAARNHSQLRGPRPPPLTVNKSSSTNISKKSTKNNPLPISNQRHRRSPIIIYLRS 60

Query: 61  PKIIHVRPEEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEFASACNCIPS 110
           PK+IHVRPEEFKSFVQRLTGNRSSVAVVASSCSA+GMI D   EEF S CNCIPS
Sbjct: 61  PKVIHVRPEEFKSFVQRLTGNRSSVAVVASSCSATGMIND---EEFVSVCNCIPS 112

[Close]

BLAST of MELO3C009575 vs. NCBI nr
Match: gi|734379702|gb|KHN22584.1| (hypothetical protein glysoja_037734 [Glycine soja])

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-13
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 3   MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 62
           MN  A   Q QL+GP+P  L +N++ST I KK  ++    +  SP+I++L+SPK+IHVRP
Sbjct: 1   MNSQATSRQKQLQGPKPASLMINRNSTKISKKQKQH---LSHHSPVIVHLKSPKVIHVRP 60

Query: 63  EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF 101
           EEF S VQ+LT N  S A  A     S  + ++  E+F
Sbjct: 61  EEFMSLVQQLTRNPVSAAFAAPKMDKSSTVVENPIEDF 95

[Close]

BLAST of MELO3C009575 vs. NCBI nr
Match: gi|955314075|ref|XP_014629746.1| (PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Glycine max])

HSP 1 Score: 84.0 bits (206), Expect = 1.8e-13
Identity = 43/98 (43.88%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 3   MNFTAARNQSQLRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRP 62
           MN  A   Q QL+GP+P  L +N++ST I KK  ++    +  SP+I++L+SPK+IHVRP
Sbjct: 1   MNSQATSRQKQLQGPKPASLMINRNSTKINKKQKQH---LSHHSPVIVHLKSPKVIHVRP 60

Query: 63  EEFKSFVQRLTGNRSSVAVVASSCSASGMITDHSGEEF 101
           EEF S VQ+LT N  S A  A     S  + ++  E+F
Sbjct: 61  EEFMSLVQQLTRNPVSAAFAAPKMDKSSTVVENPIEDF 95

[Close]

BLAST of MELO3C009575 vs. NCBI nr
Match: gi|703152523|ref|XP_010110444.1| (hypothetical protein L484_006437 [Morus notabilis])

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-13
Identity = 44/92 (47.83%), Postives = 58/92 (63.04%), Query Frame = 1


Query: 14  LRGPRPPPLTVNKSSTNIFKKSTKNPNQRNRRSPIIIYLRSPKIIHVRPEEFKSFVQRLT 73
           L+GPRP PLT+++SS  I K   + P       PI++YLRSPKIIHVRPEEF S VQ+LT
Sbjct: 8   LQGPRPTPLTISRSSAKITKIKQRAP------PPIVVYLRSPKIIHVRPEEFMSLVQQLT 67

Query: 74  GNRSSVAVVASSCSASGMITDHSGEEFASACN 106
           GN   ++  +++ +  G      GEEF S  N
Sbjct: 68  GNHPKISASSATRNIEGQ-NKFYGEEFTSRVN 92

The following BLAST results are available for this feature:

BLAST of MELO3C009575 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MKS1_ARATH	4.0e-08	43.04	Protein MKS1 OS=Arabidopsis thaliana GN=MKS1 PE=1 SV=2	[more]
VQ8_ARATH	2.0e-07	40.00	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana GN=VQ8 PE=2...	[more]

BLAST of MELO3C009575 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEW5_CUCSA	3.6e-40	80.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G785410 PE=4 SV=1	[more]
A0A0B2QR10_GLYSO	9.8e-14	43.88	Uncharacterized protein OS=Glycine soja GN=glysoja_037734 PE=4 SV=1	[more]
I1JQC4_SOYBN	1.3e-13	43.88	Uncharacterized protein OS=Glycine max GN=GLYMA_03G204900 PE=4 SV=1	[more]
W9STZ0_9ROSA	2.9e-13	47.83	Uncharacterized protein OS=Morus notabilis GN=L484_006437 PE=4 SV=1	[more]
A0A0B2SA13_GLYSO	3.7e-13	49.40	Uncharacterized protein OS=Glycine soja GN=glysoja_002174 PE=4 SV=1	[more]

BLAST of MELO3C009575 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18690.1	2.2e-09	43.04	MAP kinase substrate 1	[more]
AT1G68450.1	1.1e-08	40.00	VQ motif-containing protein	[more]
AT1G21326.1	9.4e-08	38.89	VQ motif-containing protein	[more]
AT1G21320.1	6.1e-07	34.02	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	6.1e-07	43.33	VQ motif-containing protein	[more]

BLAST of MELO3C009575 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085780\|ref\|XP_008443599.1\|	1.8e-53	100.00	PREDICTED: protein MKS1-like [Cucumis melo]	[more]
gi\|700204114\|gb\|KGN59247.1\|	5.1e-40	80.87	hypothetical protein Csa_3G785410 [Cucumis sativus]	[more]
gi\|734379702\|gb\|KHN22584.1\|	1.4e-13	43.88	hypothetical protein glysoja_037734 [Glycine soja]	[more]
gi\|955314075\|ref\|XP_014629746.1\|	1.8e-13	43.88	PREDICTED: VQ motif-containing protein 8, chloroplastic-like [Glycine max]	[more]
gi\|703152523\|ref\|XP_010110444.1\|	4.1e-13	47.83	hypothetical protein L484_006437 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C009575T1	MELO3C009575T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 54..77 score: 7.
None	No IPR available	PANTHER	PTHR33143	FAMILY NOT NAMED	coord: 1..101 score: 1.3
None	No IPR available	PANTHER	PTHR33143:SF8	SUBFAMILY NOT NAMED	coord: 1..101 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C009575	Csa3G785410	Cucumber (Chinese Long) v2	cumeB223
MELO3C009575	Cla017590	Watermelon (97103) v1	mewmB346
MELO3C009575	ClCG10G017960	Watermelon (Charleston Gray)	mewcgB315
MELO3C009575	Cla97C10G200920	Watermelon (97103) v2	mewmbB316
MELO3C009575	Bhi11G002064	Wax gourd	mewgoB381
MELO3C009575	CSPI03G35970	Wild cucumber (PI 183967)	cpimeB214
MELO3C009575	Cucsa.242220	Cucumber (Gy14) v1	cgymeB412
MELO3C009575	CmaCh06G005530	Cucurbita maxima (Rimu)	cmameB755
MELO3C009575	CmoCh06G005570	Cucurbita moschata (Rifu)	cmomeB747
MELO3C009575	Lsi03G017850	Bottle gourd (USVL1VR-Ls)	lsimeB260
MELO3C009575	Cp4.1LG08g09380	Cucurbita pepo (Zucchini)	cpemeB796
MELO3C009575	CsGy3G033410	Cucumber (Gy14) v2	cgybmeB184
MELO3C009575	Carg16243	Silver-seed gourd	carmeB0679
MELO3C009575	CsaV3_3G038330	Cucumber (Chinese Long) v3	cucmeB218

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C009575	Cucurbita maxima (Rimu)	cmameB229
MELO3C009575	Cucurbita moschata (Rifu)	cmomeB215
MELO3C009575	Cucurbita pepo (Zucchini)	cpemeB571
MELO3C009575	Silver-seed gourd	carmeB0251