MELO3C008873 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008873
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cleavage stimulation factor subunit 3
Location	chr8 : 23297075 .. 23306021 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGTGCGGAATGTTCTCCCACCTTTTCATATAGTTGTAGCCTTGTACAGGTGGAAAAAAGAAGAAAGGAAGCTCTTTCCCAAATGGGTGAAGATGGAGCATCAACATTGGAAAGTTCATTGCAAGATGTTGTGTCCCGGTATAGTTTTATGGATCTCTGGCCGTGCACATCTAGCGATCTGGATAATTTGACCAGACAAGAGGTAGTCACAGTTTCATTCTTTGTAGTTTGTACATGATTTTCTGTGGATGCCTTTAATAATTTTTGTTTCGTCTTCTGTGGTGCGTTTTGCAATTATATTTTTATATAAACTTGAAATGAAGTAAATAGTCAAGCCCTAGTATGCACTCTGACGAGGAAGCTTGCTTGCCTTGAGGAAAAGGCTTGAACTTTTTTATAGTGTTTCTATTTTTTGTTAGAGAAATTCATCGTTTGATGCCATAACTCACATGACTTCAAATTTTTTCGCCTAAACCATAATTATATGGAAATGGAGGGGAAAGCAGAAACTTACGCTGCAAAATATTTTTGGAATGTAAAACAAGGGGGGCAGTACATGTTTGAGTTTTTAACATATTCCTTGTAAACTCTTTTACTTGACTGGTGCTACTTCTACTCTTTCAGTGGCTCGCTAAGAACATAAGTAAGAACTCAGAAAAATCTAGTCTTCCTGGTGGAACTGGATTCTTAGGTAATTTTATTATTTTTTTTCTGGTTGAAATATGTTGGTAAACTTTGTTTCTTCTGGGTAAGCTCTATCCTTTTTTATCCAGATACTGGTTCTGCTGGTTTTGTGAGTCATTCAATTCCATCTACAAAGGTTGTTTATCCTGATACCTCTCAGATGGTGATTTATGACCCAAGCCAAATATTAGGTAATTATGAAACTCTAGACTTTTATCCTGGAATTTAAGTAAGATGGGTCTATCAAGTTCTAATATCTTTTAGGACAGCTTTAATTGGTGGCATCATATTTTCAGAGTTTGGTGATTAATTAATGTAGTTATCAACCATTTAATTTTTATAAATACTACTGTTTAATATCTAATATAATGTCTAGTTGTCCTGCAATATTTTTGCAATGAAGTTTTTGGAACCAGTTGCATTGCACCTACAACTCTCAGAAAGAATATTTAAATATCATTGTCATTTTGTCATCACTAATGAACTTTATAGAACATTCTTTTCTGACTTTCTTTTAGTGGTTTTTTGTGCCAACTGCTGGGACTATTGGTTCCTGCTCATATACTCGTTTTGATGAAATTGACTTTGTTTTTGTGAGGAAATTGTAAGACCCCTAGTTAGAATTATTGGTATTATTTGTATGATCAGTAGTAAGGGATGTTCTTGTAATTAGACATTAAGTTTGTTAGATCTTTTTGGTTATAAATAGTAGGTGATAGTGAGACTAGAGGTGTGAAAAATTTTGTGGGATTTTCATTTGGAAATTTGGGAGAGAATAACCCTCTCGAAAGATTGGTAAATTCTTATTTCATCATTGATATTGCTCTAGAAAGATTGGTATATTCTTATTTCTTCATTGATATTGCAATATATGTCTATTTTCTGGAGTTCTTTGTTGTTCTGCTCATGAGGTATCCTAACAGAAATATAAGGGAAAAAAGAGTGAGAATGACCCAAATTAAATACTTGGAGTTGGATAACTAGAAGTAAGTTTGGTGATACCATTGGAGGAAACGTTTGGCTAATTAAAACATGCTAGATATGCAATGGAATAACGTTTACTATAGTACTATAACGGATTGAGAAGAAAAACCATTTTTTTTTCCGCTCAAGGATCTTATGAGTAACTATAAATATCCTGCTAAAAATAGATAACTCCGTTTTCAGAGTATAATACCAATTGATTATTTGATTTGATTTTACTAAAATTGCTCGTGATTCGGCGGTGACAGGAATTCTTCCAACTGCAACAACTTCAGGACTTCCGGCTAATCCGTCAAATCCAGTTTCTGTTGCAAGTGGAGCGCCGACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCGTTAATAGCATTTCTTGCAAACTTACCTGCTGTTGATGGTAACCTTTCTTATTATATCTTATTTTGAAGGCAGTCATGGTTATGAGTGCAAATAAAGTCTCATATTAGCTAGGAAAGGGGAAGATCCATACTATAAAAGTGAGAACAATTATCTCCATTGCGATGAAACGGTGTAGATGAAATCCAAACAGAGACAGCCACCGCTGCCAGGATTGCTGCTGCCATGGAAAAGTTGCTCCACTAGCTTCAAAAGATGCTGGCAGTCACAGCCTACCCTTGGAGTCAGCCGTGCAGTCCAGTGGTGGAAACCAGCCGCACGCACCGCCGCCCAATGCCTCCACTACTCAGCTGGTCTACTCCCACTTGTCTTCCCAAGTCCAGCCACGATACCCTTCTGGTTAGCCACAGCTCCAAGCGCTGTCGCTGCCCTCAATTTATGGATTGTCATTGTTTCACGCACCACTGTCCTTTGATTCTTTACAGCAGCCGCACGTCCATGGTACCGGGATCGATCAAGTCCATAAGAAATCAAGGTTTGAAGTTGGTGAATCTTCGACACAATCCAAACCAACTGACTTGCCAATGTACTCCAAAAACCCATTAACTTCGTTCCCTAACTTGTCATCTGGTGCCTTTCCAAGAGAGAAGCTGAATGGCCAGAATTACTTTTCCTGGTCTCAATTGATCAAGATGTTTCTCGATGGTCGTCACCAATTCGATTTTCTGACAGGGAGACTCTCCTTCCCTTATCCGTGATGCCCTGGAACCCTTCCTTTATTTGGTCCATGTTGATTAATAGTATGGAACCACAAATGGGCAAGCCTTTGCTTTATGCAACAACTGCCAAAGATATATGAGACACGACTCAGAAACTCTATTCAAAGCGTCAGAACGCTTCTCATTTGTATACACTAAGGAAACAAGTCTATGATTGCAAACAAGGAACTTTGGATGTAACCTCTTGCTTCAATAGACTCTCTACTTTGGTAAGAGATGGACTTGTGCAGAGAGACAGTATGAGATACTCCGAATGATGGTATACAGTATGCTAGACTTGAAGAGTTGATCGGATTTATGACTTCCTTGCAGGCCTCAACCCCAAGTTCGACATTGTCTGTGGTCTTATACTTGGACAGAGACCTCTTCCCTCCTTAATGAAAGTGTGTTGTAAAGTTCGTCTTGAAGTAGATCGTACAAAGGCCATGAGTGTTCCGACTACTCTTGAGTAGACTCCGCTGCCTTCAGTGCTAGATCTTCAACCCATAACAGTGAGAGGAAAAAACGAGAAACCAATCCTTATATGTGAGCATTGCAAGAAACTGTGGCATAATAAGGATCAATGTTGGAAACTTCATGGTCATCCCTTTGGAGGTAAGAAACATTCCTCCAATGATAAACAAAATTTAGGGTGTGCTTATATGAGTGAGTTTGCTAGCACTTCTCAACCATCTGGCCCTACTGTAAATCAGAACGGTCCCAATCCACCCTCTACTCTACGAGCCATTGCTTAATAAGGTATGCCCCAACCCCTTTTTTTTTTTTTTTTTTTGAAACGGAGACAAACTTATTTATTAATGTAAAACTCAAAGTACAAGAGAATTATACAGTGAGAATTAGAGAGAAACCTCAGTCCTTTAGTCTTTTCAGCGTTGATGGGAACCCTTGGATCCTAGCCTTGGGGGGCTACAGATCACTTGACAGGTTTCTTTGAGAATTTTGTTTCTTATATTCTGTGTGTTGGTAATGAAAAGATCACAATAACTAATGGTTGTTTAGCTTCAATTGCTAGGAAGGGACAAATTTTTCCTTTTGCAGAGCTATTCCTTCAGAATGCTTTGCATGTGCCTAAGATTCCCTATAATTTGCTATTTGTAAGCAAGATCACTTGTGAGTTGAACTACAAAGCTACTTCCTTACCTGAATTTGTTTCTTGTCACTACTTGAGCTCGGGGAGGATGATTGGCACTGCCCGACATAGCAGGGGACTCTATCTCCTTGACGATGATACCTCTGCTACCTCCGTTAGTAGTATCTCTAGGGCTAGTTTATTGTCTTCATATTTTACAATTTCCTAACAAGATTGTATGTTATGGCATTTTTGATTGGGCCACCCAAACTTTACATATATGAAGGATTTATTTCCTCATCTCTTTTCTAAAGTTGAGGTCTCCTCTTTATCTTGTGATGTGTGTGTTCAGGCCAAACAACATCAGGTCTCCTTCATCTCACAACCATATAAAACAAGCCAGCTGTTCACCCTTATCCATAGTGACGTTTAGGGTCCATCCAAGATCACTACCTGCTCTGGGAAACAGTGGTTTGTGAATTGTATTGATGTTCATACCTACCTTATTTGGGTCTTTTTTATCATTGATAAATCTTGGGTTTCCTTTGTTTTCCAGAACTTCTATCACACCATCGAAATGCAATTCAATGCAAAAAAATTGATTCTTCGAAGTGATAACGGTCGGGAGTTTGAAAACCATACCCTTAGTGAGTTCCTAGCCTCCAAGGGGATAGTTCACCAGAGCTTATGTGCTTACGCCCCTCAACAAAATGGGGTTGCCGAGTAGAAAAATTATTACCTTTTGGAAGTAGCTCATCCACGTATGCTGTCTACTTCCCTTTCTTAATATCTGTGGGGAGATGTTGTTCCTACTGCAGCTTATCTCATCAATAGGATGTCTTCTTGTGTCCTTCACCTTCAGCTCCCTTAGATTGTCTCAAGGAGTCGTATCCGTCTATCGCTTAACTTTTTAGGTCCATATCTTTGACCCTAATCAGACTAAATTTACCCCTCGGGCTCAGGGGTGTGTTTGTTGGGTATCCTCTTCATTAGTGGGGCTATAAATGCTTCCAACCTCCTTTCCGTTACTTTGTCGCTGTGGATAAAACCTTTTGTGAGAATTGGCCATTTTTTCCTGTTAGCCATCTTCTGGGGGAGAATGTGAATGAGGATTCTAACTATACCTTAGAGTCTACCAATCCTACTTCTACTATCTTACCTATCTCCGATCCTCATCTCATGGTCCTACCCACAAACCAAGTTCACTGGAAAACTTACTATAGGAGAAATCTTGTAAAGGAAATTGTGTCCCCTATTGATTAGCCGGCTCCAATCCAAGACTCTGAACTTCCTCGAGATTAAGGTATGTCTGGTTAATCCTCAAATACAAGGCAGATGGAACCCTTGATAGACACAAAGCAATGTTAGTTGCAAAAGGGTTTACTCAGACCAATTGTGTTGTGTTAGAATTAGTGGGCTTGGCCCATAGGGTTTTTTGGAAAGATTGTTGTGTATTCTATTTATTCTCCCTTTGTACCTATTGTAATTCATCCTAAAATAATAAGAGTAACAATATCGTGGTTTTTCTCCTAGTACTCAGGTTTTCACGTAACCCTTATTTTTGTGTTCTATTGATTACTTGGAGGCGTTTTTCCCAATTGCAACTAATTACACTTAGATTCCTGTTATCTGTTGTTGTGAACAAAGATTGGCCTCTATATTAGCTATATGTTAAGAATGCGTTCTTGAATGGAGACTTAGAGGAGGATCCCCCTCGGGGTTTGAAGCTCAATTTGGTCACAGGGCTTGTAAACTTAAGAAATTTTTATATGGATTGAAACAGTCAAGTCCCAAGGGTACACTTAGGGGTACTTTAACCACACTTTGTTTACAAAAGTCTCCAAGGCTGGAAAGATTGCGTTGTTGATTATTTATGTTGATGACATCGTCTGGGGATGGAATTGCTGAAATCATCCAACTAAAAAAGAGTATGGCTGATGAGTTTGAAATAAAAGACTTGGGAACTCTGAAATATTTCTTTGGGATGGAGGTAGCTAGATCTAATGAAGGTATTTCGTATCTTAAGAGGAAATATACCCTTGATTTGTTGATCGATACAGGTATGCTGGGATATCATCCTGTTGATACTCCTATTGAATTCAACCATAAACTAGGAAATTCAGGTGATAAAGAACAATACCAACGCCTTGTGAGTAAATTGATTTACTTGGTTCATACTCGACCAGATATTTCTTATGCTGTGAGTGTCATTAGCCAGTTCATGCAAGCTCATACGAGGAACATATAGAGGCGGTTAACAGAATCTTCAGGTACTTAAAAACTAACTCATGGTAAAGGATTGTTGTTTAAAAAGACAGATAGGAAAGCTACTGAGGTCTATACTGACTCTAACTGGGCAGGGTCCGTTGTTGACAAGAAATCCACCTCTGATTACTTTATCTTTGTATAGGGAAATCTTGTAACCTAGAGGAGTAAGAAGCAAGGGGTTGTGGCTAGAAGCAGTGTTGAGATTGAGTACAAGGCTATGAGTTTGGGTATATGTGAGGAAATTAGGCTTCAGAAAGTTCTATATGATCTTCATCATGATTGTGAGGTGCCGATGAAATTATTCTGTGATAACAAGGCAGCTTATTAGCATCGCATCAATCCAGTTCAACTTGATAGAATTAAACACGTGAAGATTGATTGACACTTCGTTAAAGAATCAAGGCAATAGGTTGCTGATATTCTCACCAAAGGACTTCTCAAACAAAACTTTGACTTTTGTGTTAGCAAGTTGGGTCTCATTGATATCTACGTCCCAACTTGAGGGGAAGTGTTAGAATTAGTGGGTTTGACCCAAGGAAGGATTTATCCTAATATTCTTTCCTTTTTTATCGTAAGCTGTAACCTATTGATCTTCCCTCTTGTATCTTTTGTTAATATGAGAAATTAATAAGAAAGTCGTGGTTTTTCTCCCAGTACTCGAGTTTGCACGTAACTCGGTATCGACTTTACTTTATCACTTTTTGACACATCTCATGAAATTTCAGGTCCAACTCCAGACATTGATATTGTACTATCAGTTTGTCTCGAGAGTGACCTACCTACAGTTCCATTGGTCAAATCAGGGGCGACACCAGCACAAGTTTCGGGTGGTCCTGTACCTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCATGCATTTTCCAATTCCTCCCTAAAGCATACCAGAGACAAGCAATCAGGAAAGAGAAAAGATTACGACAGTATGTCCTTTTATTCTCTATTTACACTTTCCGAAACTTTGGTAATTACTTTCTAGTGGTAAAAATTTTCAATCGCATCTTTCAACCCCTAATTGTACTTATATTATATGTGGTCTCTGCTGTTTAACACCACAAACTAAATGATGACACAAGTCTATTGTGCAAATATTACCCAATATGGCACGATGTGGCTGCAAATTAAATAGGAACTTATGACAACTTAAAGCAACAAAACAAATTCCTTTATCGACCATGTTACTCTACTTTTTTCCAGCTATCTTTTTTTACCATTTATCTACATATTGTGGCAAACAACTAATACTTGTTTGACAGATATGTCGTTAAAAATGACTACGTAGAATTATAATTCTAAGTTTATGGACTACATTTTATAATTTTACCTGATTTTCAATTTTCAAAATGATATTGTCCATCATGACTTTTCTTAGGGGTTGAATTGTTGGACTGTTATGGCAAGTTAGCTAGCGGTTAACATTAAACTCTAAAATCATTGGCCTTTATTTTTCTGTTACTTTGCCTTTGGTATGGAACTGTCAGATGTAAATTAATTTTGATACATCCGTAGGACTCACCATATACGCATGCTCCTTAAGTTTAATCATTAATGATCCTCTTGATTTATTTTTGTCATACTGCCAACTATTATCTTTGTTTACTGGTTTAGTTTGGATGATGAATTTCACGTCCACTTTATGGTTATTAATTTACTTTTTAACATTATGACTTTACTTAAACAGAATCTGTTTTATAGGTTGTACAACCATGTTTTTGTGTTTTAAGGATTTAGTTTTTATAGTTAGCTTAATCCTCTGTGTACAGTACTATAAAATTACTAAGTACAGTTATTATGATTTTGGTTCTGAGTTTCAAAGACTACATCATTAGTGTTCAAGTCCAAGAAAGAAGTAGTTCTACAAGAATTCGAATCTCTTGTTTACTATTATCTCAATTCTTAAACCATTACTGTAAGTTCAAAAGTTAGTGATCCATTTTTCTAGCAAGTACCAATTACTTTTTGCTGATTGGCTATATGAGTCTGTAGCATCGAGTATTGCATATAGTGATTAATTTCGTTATAAATCAATTTGATCAAAACATCCTATGTTTCGTTCTCCAACACTTTCTTCTATTCTTCTATTACTTTGGAAGTGTGAAATTTACCTATTGTCATGTTGAATTTGGATTTCTTTTTCCTACATCTTTACATAATCTTTGTTTTCTTAAAAGTTTAAAAAAAAGGAACTATTTGATATTATTATAACTAGACGGTAACATTTGTTAATTGGTCGATAGGACAAGAGGACAATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAAAGATTTTTTCAGGATAAGACAAATCCAGAAAGCAAGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGAGACCTCTCTGGTAGCACTGGTTGAATTCATTATGCTTTTCTTTTTCTAAATTATTATCAACTTTATTCTTTCCCATAAGTTGACAATAGAGACACTCTCATTTTCCTTAAAAAGAGTTTCTCTTAAAGAAAGCTAGTACAATCATCATTTTGCTTCAGAATCTTATACTCTCTACATGCATAACTCATTACAGAATTCTTCTCCTTAATGCACATCATTACGGCTGATTTGAGAGGTCAAACTTCAATGTAATTTCATAGAAAATTTTTGATTAAATCTTGGAGGATTTATTATGTAGTTTCGAGGAGTATTCTCCTTATATCAAGATTGTGGATCATTTATTAAAATGATAATGTTTTTCATACAAAATGAGAAGATTTCTATTATTTATAGAGT

mRNA sequence

ATGGACAGTGCGGAATGTTCTCCCACCTTTTCATATAGTTGTAGCCTTGTACAGGTGGAAAAAAGAAGAAAGGAAGCTCTTTCCCAAATGGGTGAAGATGGAGCATCAACATTGGAAAGTTCATTGCAAGATGTTGTGTCCCGGTATAGTTTTATGGATCTCTGGCCGTGCACATCTAGCGATCTGGATAATTTGACCAGACAAGAGTGGCTCGCTAAGAACATAAGTAAGAACTCAGAAAAATCTAGTCTTCCTGGTGGAACTGGATTCTTAGATACTGGTTCTGCTGGTTTTGTGAGTCATTCAATTCCATCTACAAAGGTTGTTTATCCTGATACCTCTCAGATGGTGATTTATGACCCAAGCCAAATATTAGGAATTCTTCCAACTGCAACAACTTCAGGACTTCCGGCTAATCCGTCAAATCCAGTTTCTGTTGCAAGTGGAGCGCCGACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCGTTAATAGCATTTCTTGCAAACTTACCTGCTGTTGATGGTCCAACTCCAGACATTGATATTGTACTATCAGTTTGTCTCGAGAGTGACCTACCTACAGTTCCATTGGTCAAATCAGGGGCGACACCAGCACAAGTTTCGGGTGGTCCTGTACCTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCATGCATTTTCCAATTCCTCCCTAAAGCATACCAGAGACAAGCAATCAGGAAAGAGAAAAGATTACGACAGACAAGAGGACAATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAAAGATTTTTTCAGGATAAGACAAATCCAGAAAGCAAGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGAGACCTCTCTGGTAGCACTGGTTGAATTCATTATGCTTTTCTTTTTCTAAATTATTATCAACTTTATTCTTTCCCATAAGTTGACAATAGAGACACTCTCATTTTCCTTAAAAAGAGTTTCTCTTAAAGAAAGCTAGTACAATCATCATTTTGCTTCAGAATCTTATACTCTCTACATGCATAACTCATTACAGAATTCTTCTCCTTAATGCACATCATTACGGCTGATTTGAGAGGTCAAACTTCAATGTAATTTCATAGAAAATTTTTGATTAAATCTTGGAGGATTTATTATGTAGTTTCGAGGAGTATTCTCCTTATATCAAGATTGTGGATCATTTATTAAAATGATAATGTTTTTCATACAAAATGAGAAGATTTCTATTATTTATAGAGT

Coding sequence (CDS)

ATGGACAGTGCGGAATGTTCTCCCACCTTTTCATATAGTTGTAGCCTTGTACAGGTGGAAAAAAGAAGAAAGGAAGCTCTTTCCCAAATGGGTGAAGATGGAGCATCAACATTGGAAAGTTCATTGCAAGATGTTGTGTCCCGGTATAGTTTTATGGATCTCTGGCCGTGCACATCTAGCGATCTGGATAATTTGACCAGACAAGAGTGGCTCGCTAAGAACATAAGTAAGAACTCAGAAAAATCTAGTCTTCCTGGTGGAACTGGATTCTTAGATACTGGTTCTGCTGGTTTTGTGAGTCATTCAATTCCATCTACAAAGGTTGTTTATCCTGATACCTCTCAGATGGTGATTTATGACCCAAGCCAAATATTAGGAATTCTTCCAACTGCAACAACTTCAGGACTTCCGGCTAATCCGTCAAATCCAGTTTCTGTTGCAAGTGGAGCGCCGACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCGTTAATAGCATTTCTTGCAAACTTACCTGCTGTTGATGGTCCAACTCCAGACATTGATATTGTACTATCAGTTTGTCTCGAGAGTGACCTACCTACAGTTCCATTGGTCAAATCAGGGGCGACACCAGCACAAGTTTCGGGTGGTCCTGTACCTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCATGCATTTTCCAATTCCTCCCTAAAGCATACCAGAGACAAGCAATCAGGAAAGAGAAAAGATTACGACAGACAAGAGGACAATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAAAGATTTTTTCAGGATAAGACAAATCCAGAAAGCAAGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGAGACCTCTCTGGTAGCACTGGTTGA

Protein sequence

MDSAECSPTFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG*

Homology

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BLAST of MELO3C008873 vs. Swiss-Prot
Match: CTF77_ARATH (Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana GN=CSTF77 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.9e-72
Identity = 156/302 (51.66%), Postives = 204/302 (67.55%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+R KEALS  GE+G+S  ESSLQDVVSRYS+MDLWPCTS+DLD+L RQ
Sbjct: 450 TYGDLASILKVEQRMKEALSGKGEEGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQ 509

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           E L KN++K + K++LP     + + ++        S+KVVYPDTSQMV+ DP++     
Sbjct: 510 ELLVKNLNKKAGKTNLPHVPAAIGSVAS--------SSKVVYPDTSQMVVQDPTKKSEFA 569

Query: 129 PTATTSGLPAN---PSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDI 188
            +A      A+   PS   + A+    + FDEI K TP AL+AFLANLP VDGPTP++D+
Sbjct: 570 SSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVAFLANLPIVDGPTPNVDV 629

Query: 189 VLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGK 248
           VLS+CL+SD PT   VK         G P P+ +D SG ++       S +  RD+++ K
Sbjct: 630 VLSICLQSDFPTGQTVKQSFA---AKGNP-PSQNDPSGPTR-----GVSQRLPRDRRATK 689

Query: 249 RKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARG-ATSSQ--TGSASYGSAISGDLSGS 305
           RKD DRQE++++ TVQSQPLP D FR+RQ++KARG ATSSQ  TGS SYGSA SG+LSGS
Sbjct: 690 RKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQTPTGSTSYGSAFSGELSGS 734

[Close]

BLAST of MELO3C008873 vs. TrEMBL
Match: A0A0A0KZK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G594420 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 3.8e-156
Identity = 282/296 (95.27%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQ GEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 402 TYGDLASMLKVEKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 461

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGF+SHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 462 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGIL 521

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTAT SGLPANPSNPVSVASGAPT+VFDEILKATPAALIAFLANLPAVDGPTPD+DIVLS
Sbjct: 522 PTATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLS 581

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 582 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 641

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQP+PKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 642 YDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 697

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BLAST of MELO3C008873 vs. TrEMBL
Match: B9H057_POPTR (Suppressor of forked family protein OS=Populus trichocarpa GN=POPTR_0003s10540g PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 192/298 (64.43%), Postives = 227/298 (76.17%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDGAS LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 474 TYGDLASMLKVEQRRKEALSRTGEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQ 533

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQIL--G 128
           EWLAKNI+K +EKS++  G   LD   AG  S+S  S KV+YPDTSQ VIYDP Q L  G
Sbjct: 534 EWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAG 593

Query: 129 ILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIV 188
           I P+ T SG  A  SNP+S   G   NVFDE+LKATP ALI+FLANLP V+GP P++DIV
Sbjct: 594 IPPSTTASGFKA-ASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPVVEGPAPNVDIV 653

Query: 189 LSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKR 248
           LS+CL+SD+P     KSG T   +  G  P TSDLSGSS+S    + S   TRD+QSGKR
Sbjct: 654 LSICLQSDVPVGKTGKSGTTQTPMLSG--PATSDLSGSSRSRPVPSGSSFKTRDRQSGKR 713

Query: 249 KDYDRQEDNESTTVQSQPLPKDFFRIRQIQKAR-GATSSQTGSASYGSAISGDLSGST 304
           KD DRQE++E+ TVQSQPLP+D FRIRQIQK+R  AT+SQTGS SYGSA+SGDLSGST
Sbjct: 714 KDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGST 768

[Close]

BLAST of MELO3C008873 vs. TrEMBL
Match: F6H9L6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00710 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.8e-94
Identity = 186/303 (61.39%), Postives = 230/303 (75.91%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDG + LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 607 TYGDLASMLKVEQRRKEALSRTGEDGTTALESSLQDVVSRYSFMDLWPCSSRDLDHLARQ 666

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQI--LG 128
           EWLAKNI+K  EKS++  G G  +  ++GF ++S P+TKV YPDTSQMV+YDP Q    G
Sbjct: 667 EWLAKNINKKVEKSAILKGVGSTEKSASGFTTNSNPATKVFYPDTSQMVVYDPRQKPGTG 726

Query: 129 ILPTATTSGLPA---NPSNP-VSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPD 188
            LP+ T   LP+     SNP V + S  P N  DEILK+TP AL+AF+ANLPAV+GP+PD
Sbjct: 727 ALPSTTAPVLPSISGTLSNPSVPMVSSRPANPLDEILKSTPPALVAFIANLPAVEGPSPD 786

Query: 189 IDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAF-SNSSLKHTRDK 248
           +D+VLS+CL+S++ T           Q++ GPVP+TSDLSGSSKSH   S SS K  RD+
Sbjct: 787 VDVVLSICLQSNVST----GQTGLSTQLAAGPVPSTSDLSGSSKSHPVPSGSSFKPMRDR 846

Query: 249 QSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSG 305
           Q GKRKD DRQED+E+ T QS PLP+D F+IRQI+KARG T+SQTGSASYGSA SG+LSG
Sbjct: 847 QPGKRKDLDRQEDDETATAQSLPLPRDVFKIRQIRKARGGTTSQTGSASYGSAFSGELSG 905

[Close]

BLAST of MELO3C008873 vs. TrEMBL
Match: A0A067KWM7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10295 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 182/303 (60.07%), Postives = 225/303 (74.26%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDGA  LESSLQDV SRYSFMDLWPC+S DLD+L+RQ
Sbjct: 444 TYGDLASMLKVEQRRKEALSRTGEDGALALESSLQDVASRYSFMDLWPCSSKDLDHLSRQ 503

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQI---- 128
           EWLAKN SK +EKS++  G G +D  +    ++S  S K++YPDTS MVIY+P Q     
Sbjct: 504 EWLAKNTSKKTEKSAVSNGLGIVDKVNTSAANNSSISAKIIYPDTSCMVIYEPKQKQETG 563

Query: 129 LGILPTATTSGLPANPS-NP-VSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPD 188
                TA  SG  ++PS NP + +     TN FDEILKATPA L +FLANLP V+GPTP+
Sbjct: 564 TSTSTTAPGSGTASSPSINPIIGLVGSEATNAFDEILKATPATLRSFLANLPTVEGPTPN 623

Query: 189 IDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSH-AFSNSSLKHTRDK 248
           +DI+LS+CL+SD+PT  + K G +   +  GP P TSDLSGSSKS    S SS + +RD+
Sbjct: 624 VDIILSICLQSDIPTGQMGKLGTSAVPLPAGPAPATSDLSGSSKSRPVLSGSSFQQSRDR 683

Query: 249 QSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSG 305
           QSGKRK  DRQE++E+ TVQSQPLP+D FRIRQIQK+R  T SQTGSASYGSA+SGDLSG
Sbjct: 684 QSGKRKGVDRQEEDETATVQSQPLPRDVFRIRQIQKSRVGTVSQTGSASYGSALSGDLSG 743

[Close]

BLAST of MELO3C008873 vs. TrEMBL
Match: A0A061FQQ9_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044507 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.0e-92
Identity = 181/301 (60.13%), Postives = 219/301 (72.76%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS   E+ AS LESSLQDVV+RYSF DLWPCTS DLD+L+RQ
Sbjct: 460 TYGDLASMLKVEQRRKEALSGKSEEAASVLESSLQDVVARYSFKDLWPCTSKDLDHLSRQ 519

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNI K  EKS+   G+  +D   +   S+S  S KV+YPD SQMV+YDP Q  G  
Sbjct: 520 EWLAKNIGKKVEKSAFSNGSVTIDKNPSAPTSNSTASVKVLYPDISQMVVYDPRQHSGTA 579

Query: 129 -PTATTSGLPANPSNP-----VSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPD 188
            P  TT+      SNP     +S       N FDE+LKATP AL+AFL NLPA++GP P+
Sbjct: 580 APPNTTAPAILAASNPLSNPTISAVDSGSANAFDEVLKATPPALVAFLTNLPALEGPKPN 639

Query: 189 IDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQ 248
           +DIVLS+CL+SDLPT    K  A P+Q + GP P+TSDLSGSSKSH   +SS    RD+ 
Sbjct: 640 VDIVLSICLQSDLPTGQTKKLTALPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRH 699

Query: 249 SGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGS 304
            GKRKD DRQE++E+TTVQSQPLP+D FRIRQIQKARG ++SQTGS SYGSA+SGDLSGS
Sbjct: 700 LGKRKDLDRQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQTGSVSYGSALSGDLSGS 759

[Close]

BLAST of MELO3C008873 vs. TAIR10
Match: AT1G17760.1 (AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 272.7 bits (696), Expect = 2.7e-73
Identity = 156/302 (51.66%), Postives = 204/302 (67.55%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+R KEALS  GE+G+S  ESSLQDVVSRYS+MDLWPCTS+DLD+L RQ
Sbjct: 450 TYGDLASILKVEQRMKEALSGKGEEGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQ 509

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           E L KN++K + K++LP     + + ++        S+KVVYPDTSQMV+ DP++     
Sbjct: 510 ELLVKNLNKKAGKTNLPHVPAAIGSVAS--------SSKVVYPDTSQMVVQDPTKKSEFA 569

Query: 129 PTATTSGLPAN---PSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDI 188
            +A      A+   PS   + A+    + FDEI K TP AL+AFLANLP VDGPTP++D+
Sbjct: 570 SSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVAFLANLPIVDGPTPNVDV 629

Query: 189 VLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGK 248
           VLS+CL+SD PT   VK         G P P+ +D SG ++       S +  RD+++ K
Sbjct: 630 VLSICLQSDFPTGQTVKQSFA---AKGNP-PSQNDPSGPTR-----GVSQRLPRDRRATK 689

Query: 249 RKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARG-ATSSQ--TGSASYGSAISGDLSGS 305
           RKD DRQE++++ TVQSQPLP D FR+RQ++KARG ATSSQ  TGS SYGSA SG+LSGS
Sbjct: 690 RKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQTPTGSTSYGSAFSGELSGS 734

[Close]

BLAST of MELO3C008873 vs. NCBI nr
Match: gi|659082815|ref|XP_008442046.1| (PREDICTED: cleavage stimulation factor subunit 3 [Cucumis melo])

HSP 1 Score: 567.4 bits (1461), Expect = 1.5e-158
Identity = 288/296 (97.30%), Postives = 292/296 (98.65%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 470 TYGDLASMLKVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 529

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 530 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 589

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS
Sbjct: 590 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 649

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 650 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 709

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 710 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 765

[Close]

BLAST of MELO3C008873 vs. NCBI nr
Match: gi|778695232|ref|XP_011653953.1| (PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 5.4e-156
Identity = 282/296 (95.27%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQ GEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 470 TYGDLASMLKVEKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 529

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGF+SHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 530 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGIL 589

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTAT SGLPANPSNPVSVASGAPT+VFDEILKATPAALIAFLANLPAVDGPTPD+DIVLS
Sbjct: 590 PTATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLS 649

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 650 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 709

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQP+PKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 710 YDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 765

[Close]

BLAST of MELO3C008873 vs. NCBI nr
Match: gi|700199750|gb|KGN54908.1| (hypothetical protein Csa_4G594420 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 5.4e-156
Identity = 282/296 (95.27%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQ GEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 402 TYGDLASMLKVEKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 461

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGF+SHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 462 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGIL 521

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTAT SGLPANPSNPVSVASGAPT+VFDEILKATPAALIAFLANLPAVDGPTPD+DIVLS
Sbjct: 522 PTATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLS 581

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 582 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 641

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQP+PKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 642 YDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 697

[Close]

BLAST of MELO3C008873 vs. NCBI nr
Match: gi|224071487|ref|XP_002303484.1| (suppressor of forked family protein [Populus trichocarpa])

HSP 1 Score: 356.3 bits (913), Expect = 5.3e-95
Identity = 192/298 (64.43%), Postives = 227/298 (76.17%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDGAS LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 474 TYGDLASMLKVEQRRKEALSRTGEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQ 533

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQIL--G 128
           EWLAKNI+K +EKS++  G   LD   AG  S+S  S KV+YPDTSQ VIYDP Q L  G
Sbjct: 534 EWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAG 593

Query: 129 ILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIV 188
           I P+ T SG  A  SNP+S   G   NVFDE+LKATP ALI+FLANLP V+GP P++DIV
Sbjct: 594 IPPSTTASGFKA-ASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPVVEGPAPNVDIV 653

Query: 189 LSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKR 248
           LS+CL+SD+P     KSG T   +  G  P TSDLSGSS+S    + S   TRD+QSGKR
Sbjct: 654 LSICLQSDVPVGKTGKSGTTQTPMLSG--PATSDLSGSSRSRPVPSGSSFKTRDRQSGKR 713

Query: 249 KDYDRQEDNESTTVQSQPLPKDFFRIRQIQKAR-GATSSQTGSASYGSAISGDLSGST 304
           KD DRQE++E+ TVQSQPLP+D FRIRQIQK+R  AT+SQTGS SYGSA+SGDLSGST
Sbjct: 714 KDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGST 768

[Close]

BLAST of MELO3C008873 vs. NCBI nr
Match: gi|743847482|ref|XP_011027985.1| (PREDICTED: cleavage stimulation factor subunit 77 [Populus euphratica])

HSP 1 Score: 355.1 bits (910), Expect = 1.2e-94
Identity = 191/297 (64.31%), Postives = 226/297 (76.09%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    SL++VE+RRKEALS+  EDGAS LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 474 TYGDLASLLKVEQRRKEALSRTVEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQ 533

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQIL--G 128
           EWLAKNI+K +EKS++  G   LD   AG  S+S  S KV+Y DTSQMVIYDP Q L  G
Sbjct: 534 EWLAKNINKKAEKSAVSNGPANLDKIPAGLASNSNASGKVIYQDTSQMVIYDPRQKLEAG 593

Query: 129 ILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIV 188
           I P+ T SG  A  SNP+S + G   NVFDE+LKATP ALI+FLANLP V+GP P++DIV
Sbjct: 594 IPPSTTVSGFKA-ASNPLSNSIGLAPNVFDEVLKATPPALISFLANLPIVEGPAPNVDIV 653

Query: 189 LSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKR 248
           LS+CL+SD+P     KSG T   +  G  P TSDLSGSS+S    + S   TRD+QSGKR
Sbjct: 654 LSICLQSDVPVGKTGKSGTTQTPMLSG--PATSDLSGSSRSRPVPSGSSFKTRDRQSGKR 713

Query: 249 KDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGST 304
           KD DRQE++E+ TVQSQPLP+D FRIR IQK+R AT+SQTGS SYGSA+SGDLSGST
Sbjct: 714 KDRDRQEEDETATVQSQPLPRDVFRIRLIQKSRAATTSQTGSVSYGSALSGDLSGST 767

The following BLAST results are available for this feature:

BLAST of MELO3C008873 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CTF77_ARATH	4.9e-72	51.66	Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana GN=CSTF77 PE=1 SV...	[more]

BLAST of MELO3C008873 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZK4_CUCSA	3.8e-156	95.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G594420 PE=4 SV=1	[more]
B9H057_POPTR	3.7e-95	64.43	Suppressor of forked family protein OS=Populus trichocarpa GN=POPTR_0003s10540g ...	[more]
F6H9L6_VITVI	1.8e-94	61.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00710 PE=4 SV=...	[more]
A0A067KWM7_JATCU	2.3e-92	60.07	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10295 PE=4 SV=1	[more]
A0A061FQQ9_THECC	5.0e-92	60.13	Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G...	[more]

BLAST of MELO3C008873 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17760.1	2.7e-73	51.66	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of MELO3C008873 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082815\|ref\|XP_008442046.1\|	1.5e-158	97.30	PREDICTED: cleavage stimulation factor subunit 3 [Cucumis melo]	[more]
gi\|778695232\|ref\|XP_011653953.1\|	5.4e-156	95.27	PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis sativus]	[more]
gi\|700199750\|gb\|KGN54908.1\|	5.4e-156	95.27	hypothetical protein Csa_4G594420 [Cucumis sativus]	[more]
gi\|224071487\|ref\|XP_002303484.1\|	5.3e-95	64.43	suppressor of forked family protein [Populus trichocarpa]	[more]
gi\|743847482\|ref\|XP_011027985.1\|	1.2e-94	64.31	PREDICTED: cleavage stimulation factor subunit 77 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008847	Suf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016458	gene silencing
biological_process	GO:0006397	mRNA processing
biological_process	GO:0050794	regulation of cellular process
biological_process	GO:0042868	antisense RNA metabolic process
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0045892	negative regulation of transcription, DNA-templated
biological_process	GO:0060968	regulation of gene silencing
biological_process	GO:0031123	RNA 3'-end processing
biological_process	GO:0010629	negative regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54336	melon EST collection version 4.0	transcribed_cluster
MU56233	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008873T1	MELO3C008873T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54336	MU54336	transcribed_cluster
MU56233	MU56233	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008847	Suppressor of forked	PFAM	PF05843	Suf	coord: 15..196 score: 7.1
None	No IPR available	PANTHER	PTHR19980	RNA CLEAVAGE STIMULATION FACTOR	coord: 15..277 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008873	Csa4G594420	Cucumber (Chinese Long) v2	cumeB333
MELO3C008873	Cla012179	Watermelon (97103) v1	mewmB587
MELO3C008873	ClCG04G004820	Watermelon (Charleston Gray)	mewcgB533
MELO3C008873	Cla97C04G071390	Watermelon (97103) v2	mewmbB542
MELO3C008873	Bhi03G001914	Wax gourd	mewgoB660
MELO3C008873	CSPI04G21310	Wild cucumber (PI 183967)	cpimeB335
MELO3C008873	Cucsa.059160	Cucumber (Gy14) v1	cgymeB047
MELO3C008873	CmaCh07G011310	Cucurbita maxima (Rimu)	cmameB801
MELO3C008873	Cp4.1LG19g02250	Cucurbita pepo (Zucchini)	cpemeB459
MELO3C008873	Carg13344	Silver-seed gourd	carmeB0586
MELO3C008873	CsaV3_4G031660	Cucumber (Chinese Long) v3	cucmeB339

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008873	Cucurbita maxima (Rimu)	cmameB610
MELO3C008873	Cucurbita maxima (Rimu)	cmameB806
MELO3C008873	Cucurbita moschata (Rifu)	cmomeB599
MELO3C008873	Cucurbita moschata (Rifu)	cmomeB790
MELO3C008873	Cucurbita moschata (Rifu)	cmomeB785
MELO3C008873	Cucurbita pepo (Zucchini)	cpemeB070
MELO3C008873	Bottle gourd (USVL1VR-Ls)	lsimeB157
MELO3C008873	Cucumber (Gy14) v2	cgybmeB288
MELO3C008873	Silver-seed gourd	carmeB0998