MELO3C008873T1 (mRNA) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008873T1
Type	mRNA
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cleavage stimulation factor subunit 3
Location	chr8 : 23297075 .. 23306021 (-)
Sequence length	1287

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGTGCGGAATGTTCTCCCACCTTTTCATATAGTTGTAGCCTTGTACAGGTGGAAAAAAGAAGAAAGGAAGCTCTTTCCCAAATGGGTGAAGATGGAGCATCAACATTGGAAAGTTCATTGCAAGATGTTGTGTCCCGGTATAGTTTTATGGATCTCTGGCCGTGCACATCTAGCGATCTGGATAATTTGACCAGACAAGAGGTAGTCACAGTTTCATTCTTTGTAGTTTGTACATGATTTTCTGTGGATGCCTTTAATAATTTTTGTTTCGTCTTCTGTGGTGCGTTTTGCAATTATATTTTTATATAAACTTGAAATGAAGTAAATAGTCAAGCCCTAGTATGCACTCTGACGAGGAAGCTTGCTTGCCTTGAGGAAAAGGCTTGAACTTTTTTATAGTGTTTCTATTTTTTGTTAGAGAAATTCATCGTTTGATGCCATAACTCACATGACTTCAAATTTTTTCGCCTAAACCATAATTATATGGAAATGGAGGGGAAAGCAGAAACTTACGCTGCAAAATATTTTTGGAATGTAAAACAAGGGGGGCAGTACATGTTTGAGTTTTTAACATATTCCTTGTAAACTCTTTTACTTGACTGGTGCTACTTCTACTCTTTCAGTGGCTCGCTAAGAACATAAGTAAGAACTCAGAAAAATCTAGTCTTCCTGGTGGAACTGGATTCTTAGGTAATTTTATTATTTTTTTTCTGGTTGAAATATGTTGGTAAACTTTGTTTCTTCTGGGTAAGCTCTATCCTTTTTTATCCAGATACTGGTTCTGCTGGTTTTGTGAGTCATTCAATTCCATCTACAAAGGTTGTTTATCCTGATACCTCTCAGATGGTGATTTATGACCCAAGCCAAATATTAGGTAATTATGAAACTCTAGACTTTTATCCTGGAATTTAAGTAAGATGGGTCTATCAAGTTCTAATATCTTTTAGGACAGCTTTAATTGGTGGCATCATATTTTCAGAGTTTGGTGATTAATTAATGTAGTTATCAACCATTTAATTTTTATAAATACTACTGTTTAATATCTAATATAATGTCTAGTTGTCCTGCAATATTTTTGCAATGAAGTTTTTGGAACCAGTTGCATTGCACCTACAACTCTCAGAAAGAATATTTAAATATCATTGTCATTTTGTCATCACTAATGAACTTTATAGAACATTCTTTTCTGACTTTCTTTTAGTGGTTTTTTGTGCCAACTGCTGGGACTATTGGTTCCTGCTCATATACTCGTTTTGATGAAATTGACTTTGTTTTTGTGAGGAAATTGTAAGACCCCTAGTTAGAATTATTGGTATTATTTGTATGATCAGTAGTAAGGGATGTTCTTGTAATTAGACATTAAGTTTGTTAGATCTTTTTGGTTATAAATAGTAGGTGATAGTGAGACTAGAGGTGTGAAAAATTTTGTGGGATTTTCATTTGGAAATTTGGGAGAGAATAACCCTCTCGAAAGATTGGTAAATTCTTATTTCATCATTGATATTGCTCTAGAAAGATTGGTATATTCTTATTTCTTCATTGATATTGCAATATATGTCTATTTTCTGGAGTTCTTTGTTGTTCTGCTCATGAGGTATCCTAACAGAAATATAAGGGAAAAAAGAGTGAGAATGACCCAAATTAAATACTTGGAGTTGGATAACTAGAAGTAAGTTTGGTGATACCATTGGAGGAAACGTTTGGCTAATTAAAACATGCTAGATATGCAATGGAATAACGTTTACTATAGTACTATAACGGATTGAGAAGAAAAACCATTTTTTTTTCCGCTCAAGGATCTTATGAGTAACTATAAATATCCTGCTAAAAATAGATAACTCCGTTTTCAGAGTATAATACCAATTGATTATTTGATTTGATTTTACTAAAATTGCTCGTGATTCGGCGGTGACAGGAATTCTTCCAACTGCAACAACTTCAGGACTTCCGGCTAATCCGTCAAATCCAGTTTCTGTTGCAAGTGGAGCGCCGACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCGTTAATAGCATTTCTTGCAAACTTACCTGCTGTTGATGGTAACCTTTCTTATTATATCTTATTTTGAAGGCAGTCATGGTTATGAGTGCAAATAAAGTCTCATATTAGCTAGGAAAGGGGAAGATCCATACTATAAAAGTGAGAACAATTATCTCCATTGCGATGAAACGGTGTAGATGAAATCCAAACAGAGACAGCCACCGCTGCCAGGATTGCTGCTGCCATGGAAAAGTTGCTCCACTAGCTTCAAAAGATGCTGGCAGTCACAGCCTACCCTTGGAGTCAGCCGTGCAGTCCAGTGGTGGAAACCAGCCGCACGCACCGCCGCCCAATGCCTCCACTACTCAGCTGGTCTACTCCCACTTGTCTTCCCAAGTCCAGCCACGATACCCTTCTGGTTAGCCACAGCTCCAAGCGCTGTCGCTGCCCTCAATTTATGGATTGTCATTGTTTCACGCACCACTGTCCTTTGATTCTTTACAGCAGCCGCACGTCCATGGTACCGGGATCGATCAAGTCCATAAGAAATCAAGGTTTGAAGTTGGTGAATCTTCGACACAATCCAAACCAACTGACTTGCCAATGTACTCCAAAAACCCATTAACTTCGTTCCCTAACTTGTCATCTGGTGCCTTTCCAAGAGAGAAGCTGAATGGCCAGAATTACTTTTCCTGGTCTCAATTGATCAAGATGTTTCTCGATGGTCGTCACCAATTCGATTTTCTGACAGGGAGACTCTCCTTCCCTTATCCGTGATGCCCTGGAACCCTTCCTTTATTTGGTCCATGTTGATTAATAGTATGGAACCACAAATGGGCAAGCCTTTGCTTTATGCAACAACTGCCAAAGATATATGAGACACGACTCAGAAACTCTATTCAAAGCGTCAGAACGCTTCTCATTTGTATACACTAAGGAAACAAGTCTATGATTGCAAACAAGGAACTTTGGATGTAACCTCTTGCTTCAATAGACTCTCTACTTTGGTAAGAGATGGACTTGTGCAGAGAGACAGTATGAGATACTCCGAATGATGGTATACAGTATGCTAGACTTGAAGAGTTGATCGGATTTATGACTTCCTTGCAGGCCTCAACCCCAAGTTCGACATTGTCTGTGGTCTTATACTTGGACAGAGACCTCTTCCCTCCTTAATGAAAGTGTGTTGTAAAGTTCGTCTTGAAGTAGATCGTACAAAGGCCATGAGTGTTCCGACTACTCTTGAGTAGACTCCGCTGCCTTCAGTGCTAGATCTTCAACCCATAACAGTGAGAGGAAAAAACGAGAAACCAATCCTTATATGTGAGCATTGCAAGAAACTGTGGCATAATAAGGATCAATGTTGGAAACTTCATGGTCATCCCTTTGGAGGTAAGAAACATTCCTCCAATGATAAACAAAATTTAGGGTGTGCTTATATGAGTGAGTTTGCTAGCACTTCTCAACCATCTGGCCCTACTGTAAATCAGAACGGTCCCAATCCACCCTCTACTCTACGAGCCATTGCTTAATAAGGTATGCCCCAACCCCTTTTTTTTTTTTTTTTTTTGAAACGGAGACAAACTTATTTATTAATGTAAAACTCAAAGTACAAGAGAATTATACAGTGAGAATTAGAGAGAAACCTCAGTCCTTTAGTCTTTTCAGCGTTGATGGGAACCCTTGGATCCTAGCCTTGGGGGGCTACAGATCACTTGACAGGTTTCTTTGAGAATTTTGTTTCTTATATTCTGTGTGTTGGTAATGAAAAGATCACAATAACTAATGGTTGTTTAGCTTCAATTGCTAGGAAGGGACAAATTTTTCCTTTTGCAGAGCTATTCCTTCAGAATGCTTTGCATGTGCCTAAGATTCCCTATAATTTGCTATTTGTAAGCAAGATCACTTGTGAGTTGAACTACAAAGCTACTTCCTTACCTGAATTTGTTTCTTGTCACTACTTGAGCTCGGGGAGGATGATTGGCACTGCCCGACATAGCAGGGGACTCTATCTCCTTGACGATGATACCTCTGCTACCTCCGTTAGTAGTATCTCTAGGGCTAGTTTATTGTCTTCATATTTTACAATTTCCTAACAAGATTGTATGTTATGGCATTTTTGATTGGGCCACCCAAACTTTACATATATGAAGGATTTATTTCCTCATCTCTTTTCTAAAGTTGAGGTCTCCTCTTTATCTTGTGATGTGTGTGTTCAGGCCAAACAACATCAGGTCTCCTTCATCTCACAACCATATAAAACAAGCCAGCTGTTCACCCTTATCCATAGTGACGTTTAGGGTCCATCCAAGATCACTACCTGCTCTGGGAAACAGTGGTTTGTGAATTGTATTGATGTTCATACCTACCTTATTTGGGTCTTTTTTATCATTGATAAATCTTGGGTTTCCTTTGTTTTCCAGAACTTCTATCACACCATCGAAATGCAATTCAATGCAAAAAAATTGATTCTTCGAAGTGATAACGGTCGGGAGTTTGAAAACCATACCCTTAGTGAGTTCCTAGCCTCCAAGGGGATAGTTCACCAGAGCTTATGTGCTTACGCCCCTCAACAAAATGGGGTTGCCGAGTAGAAAAATTATTACCTTTTGGAAGTAGCTCATCCACGTATGCTGTCTACTTCCCTTTCTTAATATCTGTGGGGAGATGTTGTTCCTACTGCAGCTTATCTCATCAATAGGATGTCTTCTTGTGTCCTTCACCTTCAGCTCCCTTAGATTGTCTCAAGGAGTCGTATCCGTCTATCGCTTAACTTTTTAGGTCCATATCTTTGACCCTAATCAGACTAAATTTACCCCTCGGGCTCAGGGGTGTGTTTGTTGGGTATCCTCTTCATTAGTGGGGCTATAAATGCTTCCAACCTCCTTTCCGTTACTTTGTCGCTGTGGATAAAACCTTTTGTGAGAATTGGCCATTTTTTCCTGTTAGCCATCTTCTGGGGGAGAATGTGAATGAGGATTCTAACTATACCTTAGAGTCTACCAATCCTACTTCTACTATCTTACCTATCTCCGATCCTCATCTCATGGTCCTACCCACAAACCAAGTTCACTGGAAAACTTACTATAGGAGAAATCTTGTAAAGGAAATTGTGTCCCCTATTGATTAGCCGGCTCCAATCCAAGACTCTGAACTTCCTCGAGATTAAGGTATGTCTGGTTAATCCTCAAATACAAGGCAGATGGAACCCTTGATAGACACAAAGCAATGTTAGTTGCAAAAGGGTTTACTCAGACCAATTGTGTTGTGTTAGAATTAGTGGGCTTGGCCCATAGGGTTTTTTGGAAAGATTGTTGTGTATTCTATTTATTCTCCCTTTGTACCTATTGTAATTCATCCTAAAATAATAAGAGTAACAATATCGTGGTTTTTCTCCTAGTACTCAGGTTTTCACGTAACCCTTATTTTTGTGTTCTATTGATTACTTGGAGGCGTTTTTCCCAATTGCAACTAATTACACTTAGATTCCTGTTATCTGTTGTTGTGAACAAAGATTGGCCTCTATATTAGCTATATGTTAAGAATGCGTTCTTGAATGGAGACTTAGAGGAGGATCCCCCTCGGGGTTTGAAGCTCAATTTGGTCACAGGGCTTGTAAACTTAAGAAATTTTTATATGGATTGAAACAGTCAAGTCCCAAGGGTACACTTAGGGGTACTTTAACCACACTTTGTTTACAAAAGTCTCCAAGGCTGGAAAGATTGCGTTGTTGATTATTTATGTTGATGACATCGTCTGGGGATGGAATTGCTGAAATCATCCAACTAAAAAAGAGTATGGCTGATGAGTTTGAAATAAAAGACTTGGGAACTCTGAAATATTTCTTTGGGATGGAGGTAGCTAGATCTAATGAAGGTATTTCGTATCTTAAGAGGAAATATACCCTTGATTTGTTGATCGATACAGGTATGCTGGGATATCATCCTGTTGATACTCCTATTGAATTCAACCATAAACTAGGAAATTCAGGTGATAAAGAACAATACCAACGCCTTGTGAGTAAATTGATTTACTTGGTTCATACTCGACCAGATATTTCTTATGCTGTGAGTGTCATTAGCCAGTTCATGCAAGCTCATACGAGGAACATATAGAGGCGGTTAACAGAATCTTCAGGTACTTAAAAACTAACTCATGGTAAAGGATTGTTGTTTAAAAAGACAGATAGGAAAGCTACTGAGGTCTATACTGACTCTAACTGGGCAGGGTCCGTTGTTGACAAGAAATCCACCTCTGATTACTTTATCTTTGTATAGGGAAATCTTGTAACCTAGAGGAGTAAGAAGCAAGGGGTTGTGGCTAGAAGCAGTGTTGAGATTGAGTACAAGGCTATGAGTTTGGGTATATGTGAGGAAATTAGGCTTCAGAAAGTTCTATATGATCTTCATCATGATTGTGAGGTGCCGATGAAATTATTCTGTGATAACAAGGCAGCTTATTAGCATCGCATCAATCCAGTTCAACTTGATAGAATTAAACACGTGAAGATTGATTGACACTTCGTTAAAGAATCAAGGCAATAGGTTGCTGATATTCTCACCAAAGGACTTCTCAAACAAAACTTTGACTTTTGTGTTAGCAAGTTGGGTCTCATTGATATCTACGTCCCAACTTGAGGGGAAGTGTTAGAATTAGTGGGTTTGACCCAAGGAAGGATTTATCCTAATATTCTTTCCTTTTTTATCGTAAGCTGTAACCTATTGATCTTCCCTCTTGTATCTTTTGTTAATATGAGAAATTAATAAGAAAGTCGTGGTTTTTCTCCCAGTACTCGAGTTTGCACGTAACTCGGTATCGACTTTACTTTATCACTTTTTGACACATCTCATGAAATTTCAGGTCCAACTCCAGACATTGATATTGTACTATCAGTTTGTCTCGAGAGTGACCTACCTACAGTTCCATTGGTCAAATCAGGGGCGACACCAGCACAAGTTTCGGGTGGTCCTGTACCTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCATGCATTTTCCAATTCCTCCCTAAAGCATACCAGAGACAAGCAATCAGGAAAGAGAAAAGATTACGACAGTATGTCCTTTTATTCTCTATTTACACTTTCCGAAACTTTGGTAATTACTTTCTAGTGGTAAAAATTTTCAATCGCATCTTTCAACCCCTAATTGTACTTATATTATATGTGGTCTCTGCTGTTTAACACCACAAACTAAATGATGACACAAGTCTATTGTGCAAATATTACCCAATATGGCACGATGTGGCTGCAAATTAAATAGGAACTTATGACAACTTAAAGCAACAAAACAAATTCCTTTATCGACCATGTTACTCTACTTTTTTCCAGCTATCTTTTTTTACCATTTATCTACATATTGTGGCAAACAACTAATACTTGTTTGACAGATATGTCGTTAAAAATGACTACGTAGAATTATAATTCTAAGTTTATGGACTACATTTTATAATTTTACCTGATTTTCAATTTTCAAAATGATATTGTCCATCATGACTTTTCTTAGGGGTTGAATTGTTGGACTGTTATGGCAAGTTAGCTAGCGGTTAACATTAAACTCTAAAATCATTGGCCTTTATTTTTCTGTTACTTTGCCTTTGGTATGGAACTGTCAGATGTAAATTAATTTTGATACATCCGTAGGACTCACCATATACGCATGCTCCTTAAGTTTAATCATTAATGATCCTCTTGATTTATTTTTGTCATACTGCCAACTATTATCTTTGTTTACTGGTTTAGTTTGGATGATGAATTTCACGTCCACTTTATGGTTATTAATTTACTTTTTAACATTATGACTTTACTTAAACAGAATCTGTTTTATAGGTTGTACAACCATGTTTTTGTGTTTTAAGGATTTAGTTTTTATAGTTAGCTTAATCCTCTGTGTACAGTACTATAAAATTACTAAGTACAGTTATTATGATTTTGGTTCTGAGTTTCAAAGACTACATCATTAGTGTTCAAGTCCAAGAAAGAAGTAGTTCTACAAGAATTCGAATCTCTTGTTTACTATTATCTCAATTCTTAAACCATTACTGTAAGTTCAAAAGTTAGTGATCCATTTTTCTAGCAAGTACCAATTACTTTTTGCTGATTGGCTATATGAGTCTGTAGCATCGAGTATTGCATATAGTGATTAATTTCGTTATAAATCAATTTGATCAAAACATCCTATGTTTCGTTCTCCAACACTTTCTTCTATTCTTCTATTACTTTGGAAGTGTGAAATTTACCTATTGTCATGTTGAATTTGGATTTCTTTTTCCTACATCTTTACATAATCTTTGTTTTCTTAAAAGTTTAAAAAAAAGGAACTATTTGATATTATTATAACTAGACGGTAACATTTGTTAATTGGTCGATAGGACAAGAGGACAATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAAAGATTTTTTCAGGATAAGACAAATCCAGAAAGCAAGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGAGACCTCTCTGGTAGCACTGGTTGAATTCATTATGCTTTTCTTTTTCTAAATTATTATCAACTTTATTCTTTCCCATAAGTTGACAATAGAGACACTCTCATTTTCCTTAAAAAGAGTTTCTCTTAAAGAAAGCTAGTACAATCATCATTTTGCTTCAGAATCTTATACTCTCTACATGCATAACTCATTACAGAATTCTTCTCCTTAATGCACATCATTACGGCTGATTTGAGAGGTCAAACTTCAATGTAATTTCATAGAAAATTTTTGATTAAATCTTGGAGGATTTATTATGTAGTTTCGAGGAGTATTCTCCTTATATCAAGATTGTGGATCATTTATTAAAATGATAATGTTTTTCATACAAAATGAGAAGATTTCTATTATTTATAGAGT

mRNA sequence

ATGGACAGTGCGGAATGTTCTCCCACCTTTTCATATAGTTGTAGCCTTGTACAGGTGGAAAAAAGAAGAAAGGAAGCTCTTTCCCAAATGGGTGAAGATGGAGCATCAACATTGGAAAGTTCATTGCAAGATGTTGTGTCCCGGTATAGTTTTATGGATCTCTGGCCGTGCACATCTAGCGATCTGGATAATTTGACCAGACAAGAGTGGCTCGCTAAGAACATAAGTAAGAACTCAGAAAAATCTAGTCTTCCTGGTGGAACTGGATTCTTAGATACTGGTTCTGCTGGTTTTGTGAGTCATTCAATTCCATCTACAAAGGTTGTTTATCCTGATACCTCTCAGATGGTGATTTATGACCCAAGCCAAATATTAGGAATTCTTCCAACTGCAACAACTTCAGGACTTCCGGCTAATCCGTCAAATCCAGTTTCTGTTGCAAGTGGAGCGCCGACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCGTTAATAGCATTTCTTGCAAACTTACCTGCTGTTGATGGTCCAACTCCAGACATTGATATTGTACTATCAGTTTGTCTCGAGAGTGACCTACCTACAGTTCCATTGGTCAAATCAGGGGCGACACCAGCACAAGTTTCGGGTGGTCCTGTACCTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCATGCATTTTCCAATTCCTCCCTAAAGCATACCAGAGACAAGCAATCAGGAAAGAGAAAAGATTACGACAGACAAGAGGACAATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAAAGATTTTTTCAGGATAAGACAAATCCAGAAAGCAAGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGAGACCTCTCTGGTAGCACTGGTTGAATTCATTATGCTTTTCTTTTTCTAAATTATTATCAACTTTATTCTTTCCCATAAGTTGACAATAGAGACACTCTCATTTTCCTTAAAAAGAGTTTCTCTTAAAGAAAGCTAGTACAATCATCATTTTGCTTCAGAATCTTATACTCTCTACATGCATAACTCATTACAGAATTCTTCTCCTTAATGCACATCATTACGGCTGATTTGAGAGGTCAAACTTCAATGTAATTTCATAGAAAATTTTTGATTAAATCTTGGAGGATTTATTATGTAGTTTCGAGGAGTATTCTCCTTATATCAAGATTGTGGATCATTTATTAAAATGATAATGTTTTTCATACAAAATGAGAAGATTTCTATTATTTATAGAGT

Coding sequence (CDS)

ATGGACAGTGCGGAATGTTCTCCCACCTTTTCATATAGTTGTAGCCTTGTACAGGTGGAAAAAAGAAGAAAGGAAGCTCTTTCCCAAATGGGTGAAGATGGAGCATCAACATTGGAAAGTTCATTGCAAGATGTTGTGTCCCGGTATAGTTTTATGGATCTCTGGCCGTGCACATCTAGCGATCTGGATAATTTGACCAGACAAGAGTGGCTCGCTAAGAACATAAGTAAGAACTCAGAAAAATCTAGTCTTCCTGGTGGAACTGGATTCTTAGATACTGGTTCTGCTGGTTTTGTGAGTCATTCAATTCCATCTACAAAGGTTGTTTATCCTGATACCTCTCAGATGGTGATTTATGACCCAAGCCAAATATTAGGAATTCTTCCAACTGCAACAACTTCAGGACTTCCGGCTAATCCGTCAAATCCAGTTTCTGTTGCAAGTGGAGCGCCGACTAATGTATTTGACGAAATATTAAAAGCAACACCAGCTGCGTTAATAGCATTTCTTGCAAACTTACCTGCTGTTGATGGTCCAACTCCAGACATTGATATTGTACTATCAGTTTGTCTCGAGAGTGACCTACCTACAGTTCCATTGGTCAAATCAGGGGCGACACCAGCACAAGTTTCGGGTGGTCCTGTACCTACCACTAGTGACCTTTCTGGTTCAAGCAAGTCTCATGCATTTTCCAATTCCTCCCTAAAGCATACCAGAGACAAGCAATCAGGAAAGAGAAAAGATTACGACAGACAAGAGGACAATGAAAGTACAACAGTCCAAAGTCAGCCATTGCCTAAAGATTTTTTCAGGATAAGACAAATCCAGAAAGCAAGAGGAGCTACTTCTTCCCAAACAGGTTCTGCTTCCTATGGAAGTGCTATTTCTGGAGACCTCTCTGGTAGCACTGGTTGA

Protein sequence

MDSAECSPTFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQEWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG*

Homology

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BLAST of MELO3C008873T1 vs. Swiss-Prot
Match: CTF77_ARATH (Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana GN=CSTF77 PE=1 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 4.9e-72
Identity = 156/302 (51.66%), Postives = 204/302 (67.55%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+R KEALS  GE+G+S  ESSLQDVVSRYS+MDLWPCTS+DLD+L RQ
Sbjct: 450 TYGDLASILKVEQRMKEALSGKGEEGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQ 509

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           E L KN++K + K++LP     + + ++        S+KVVYPDTSQMV+ DP++     
Sbjct: 510 ELLVKNLNKKAGKTNLPHVPAAIGSVAS--------SSKVVYPDTSQMVVQDPTKKSEFA 569

Query: 129 PTATTSGLPAN---PSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDI 188
            +A      A+   PS   + A+    + FDEI K TP AL+AFLANLP VDGPTP++D+
Sbjct: 570 SSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVAFLANLPIVDGPTPNVDV 629

Query: 189 VLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGK 248
           VLS+CL+SD PT   VK         G P P+ +D SG ++       S +  RD+++ K
Sbjct: 630 VLSICLQSDFPTGQTVKQSFA---AKGNP-PSQNDPSGPTR-----GVSQRLPRDRRATK 689

Query: 249 RKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARG-ATSSQ--TGSASYGSAISGDLSGS 305
           RKD DRQE++++ TVQSQPLP D FR+RQ++KARG ATSSQ  TGS SYGSA SG+LSGS
Sbjct: 690 RKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQTPTGSTSYGSAFSGELSGS 734

[Close]

BLAST of MELO3C008873T1 vs. TrEMBL
Match: A0A0A0KZK4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G594420 PE=4 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 3.8e-156
Identity = 282/296 (95.27%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQ GEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 402 TYGDLASMLKVEKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 461

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGF+SHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 462 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGIL 521

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTAT SGLPANPSNPVSVASGAPT+VFDEILKATPAALIAFLANLPAVDGPTPD+DIVLS
Sbjct: 522 PTATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLS 581

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 582 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 641

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQP+PKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 642 YDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 697

[Close]

BLAST of MELO3C008873T1 vs. TrEMBL
Match: B9H057_POPTR (Suppressor of forked family protein OS=Populus trichocarpa GN=POPTR_0003s10540g PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 192/298 (64.43%), Postives = 227/298 (76.17%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDGAS LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 474 TYGDLASMLKVEQRRKEALSRTGEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQ 533

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQIL--G 128
           EWLAKNI+K +EKS++  G   LD   AG  S+S  S KV+YPDTSQ VIYDP Q L  G
Sbjct: 534 EWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAG 593

Query: 129 ILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIV 188
           I P+ T SG  A  SNP+S   G   NVFDE+LKATP ALI+FLANLP V+GP P++DIV
Sbjct: 594 IPPSTTASGFKA-ASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPVVEGPAPNVDIV 653

Query: 189 LSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKR 248
           LS+CL+SD+P     KSG T   +  G  P TSDLSGSS+S    + S   TRD+QSGKR
Sbjct: 654 LSICLQSDVPVGKTGKSGTTQTPMLSG--PATSDLSGSSRSRPVPSGSSFKTRDRQSGKR 713

Query: 249 KDYDRQEDNESTTVQSQPLPKDFFRIRQIQKAR-GATSSQTGSASYGSAISGDLSGST 304
           KD DRQE++E+ TVQSQPLP+D FRIRQIQK+R  AT+SQTGS SYGSA+SGDLSGST
Sbjct: 714 KDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGST 768

[Close]

BLAST of MELO3C008873T1 vs. TrEMBL
Match: F6H9L6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00710 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 1.8e-94
Identity = 186/303 (61.39%), Postives = 230/303 (75.91%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDG + LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 607 TYGDLASMLKVEQRRKEALSRTGEDGTTALESSLQDVVSRYSFMDLWPCSSRDLDHLARQ 666

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQI--LG 128
           EWLAKNI+K  EKS++  G G  +  ++GF ++S P+TKV YPDTSQMV+YDP Q    G
Sbjct: 667 EWLAKNINKKVEKSAILKGVGSTEKSASGFTTNSNPATKVFYPDTSQMVVYDPRQKPGTG 726

Query: 129 ILPTATTSGLPA---NPSNP-VSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPD 188
            LP+ T   LP+     SNP V + S  P N  DEILK+TP AL+AF+ANLPAV+GP+PD
Sbjct: 727 ALPSTTAPVLPSISGTLSNPSVPMVSSRPANPLDEILKSTPPALVAFIANLPAVEGPSPD 786

Query: 189 IDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAF-SNSSLKHTRDK 248
           +D+VLS+CL+S++ T           Q++ GPVP+TSDLSGSSKSH   S SS K  RD+
Sbjct: 787 VDVVLSICLQSNVST----GQTGLSTQLAAGPVPSTSDLSGSSKSHPVPSGSSFKPMRDR 846

Query: 249 QSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSG 305
           Q GKRKD DRQED+E+ T QS PLP+D F+IRQI+KARG T+SQTGSASYGSA SG+LSG
Sbjct: 847 QPGKRKDLDRQEDDETATAQSLPLPRDVFKIRQIRKARGGTTSQTGSASYGSAFSGELSG 905

[Close]

BLAST of MELO3C008873T1 vs. TrEMBL
Match: A0A067KWM7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10295 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 182/303 (60.07%), Postives = 225/303 (74.26%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDGA  LESSLQDV SRYSFMDLWPC+S DLD+L+RQ
Sbjct: 444 TYGDLASMLKVEQRRKEALSRTGEDGALALESSLQDVASRYSFMDLWPCSSKDLDHLSRQ 503

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQI---- 128
           EWLAKN SK +EKS++  G G +D  +    ++S  S K++YPDTS MVIY+P Q     
Sbjct: 504 EWLAKNTSKKTEKSAVSNGLGIVDKVNTSAANNSSISAKIIYPDTSCMVIYEPKQKQETG 563

Query: 129 LGILPTATTSGLPANPS-NP-VSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPD 188
                TA  SG  ++PS NP + +     TN FDEILKATPA L +FLANLP V+GPTP+
Sbjct: 564 TSTSTTAPGSGTASSPSINPIIGLVGSEATNAFDEILKATPATLRSFLANLPTVEGPTPN 623

Query: 189 IDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSH-AFSNSSLKHTRDK 248
           +DI+LS+CL+SD+PT  + K G +   +  GP P TSDLSGSSKS    S SS + +RD+
Sbjct: 624 VDIILSICLQSDIPTGQMGKLGTSAVPLPAGPAPATSDLSGSSKSRPVLSGSSFQQSRDR 683

Query: 249 QSGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSG 305
           QSGKRK  DRQE++E+ TVQSQPLP+D FRIRQIQK+R  T SQTGSASYGSA+SGDLSG
Sbjct: 684 QSGKRKGVDRQEEDETATVQSQPLPRDVFRIRQIQKSRVGTVSQTGSASYGSALSGDLSG 743

[Close]

BLAST of MELO3C008873T1 vs. TrEMBL
Match: A0A061FQQ9_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_044507 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 5.0e-92
Identity = 181/301 (60.13%), Postives = 219/301 (72.76%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS   E+ AS LESSLQDVV+RYSF DLWPCTS DLD+L+RQ
Sbjct: 460 TYGDLASMLKVEQRRKEALSGKSEEAASVLESSLQDVVARYSFKDLWPCTSKDLDHLSRQ 519

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNI K  EKS+   G+  +D   +   S+S  S KV+YPD SQMV+YDP Q  G  
Sbjct: 520 EWLAKNIGKKVEKSAFSNGSVTIDKNPSAPTSNSTASVKVLYPDISQMVVYDPRQHSGTA 579

Query: 129 -PTATTSGLPANPSNP-----VSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPD 188
            P  TT+      SNP     +S       N FDE+LKATP AL+AFL NLPA++GP P+
Sbjct: 580 APPNTTAPAILAASNPLSNPTISAVDSGSANAFDEVLKATPPALVAFLTNLPALEGPKPN 639

Query: 189 IDIVLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQ 248
           +DIVLS+CL+SDLPT    K  A P+Q + GP P+TSDLSGSSKSH   +SS    RD+ 
Sbjct: 640 VDIVLSICLQSDLPTGQTKKLTALPSQRTTGPAPSTSDLSGSSKSHPIPSSSSFRPRDRH 699

Query: 249 SGKRKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGS 304
            GKRKD DRQE++E+TTVQSQPLP+D FRIRQIQKARG ++SQTGS SYGSA+SGDLSGS
Sbjct: 700 LGKRKDLDRQEEDETTTVQSQPLPRDVFRIRQIQKARGGSASQTGSVSYGSALSGDLSGS 759

[Close]

BLAST of MELO3C008873T1 vs. TAIR10
Match: AT1G17760.1 (AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 272.7 bits (696), Expect = 2.7e-73
Identity = 156/302 (51.66%), Postives = 204/302 (67.55%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+R KEALS  GE+G+S  ESSLQDVVSRYS+MDLWPCTS+DLD+L RQ
Sbjct: 450 TYGDLASILKVEQRMKEALSGKGEEGSSPPESSLQDVVSRYSYMDLWPCTSNDLDHLARQ 509

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           E L KN++K + K++LP     + + ++        S+KVVYPDTSQMV+ DP++     
Sbjct: 510 ELLVKNLNKKAGKTNLPHVPAAIGSVAS--------SSKVVYPDTSQMVVQDPTKKSEFA 569

Query: 129 PTATTSGLPAN---PSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDI 188
            +A      A+   PS   + A+    + FDEI K TP AL+AFLANLP VDGPTP++D+
Sbjct: 570 SSANPVAASASNTFPSTVTATATHGSASTFDEIPKTTPPALVAFLANLPIVDGPTPNVDV 629

Query: 189 VLSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGK 248
           VLS+CL+SD PT   VK         G P P+ +D SG ++       S +  RD+++ K
Sbjct: 630 VLSICLQSDFPTGQTVKQSFA---AKGNP-PSQNDPSGPTR-----GVSQRLPRDRRATK 689

Query: 249 RKDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARG-ATSSQ--TGSASYGSAISGDLSGS 305
           RKD DRQE++++ TVQSQPLP D FR+RQ++KARG ATSSQ  TGS SYGSA SG+LSGS
Sbjct: 690 RKDSDRQEEDDTATVQSQPLPTDVFRLRQMRKARGIATSSQTPTGSTSYGSAFSGELSGS 734

[Close]

BLAST of MELO3C008873T1 vs. NCBI nr
Match: gi|659082815|ref|XP_008442046.1| (PREDICTED: cleavage stimulation factor subunit 3 [Cucumis melo])

HSP 1 Score: 567.4 bits (1461), Expect = 1.5e-158
Identity = 288/296 (97.30%), Postives = 292/296 (98.65%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 470 TYGDLASMLKVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 529

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 530 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 589

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS
Sbjct: 590 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 649

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 650 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 709

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 710 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 765

[Close]

BLAST of MELO3C008873T1 vs. NCBI nr
Match: gi|778695232|ref|XP_011653953.1| (PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 5.4e-156
Identity = 282/296 (95.27%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQ GEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 470 TYGDLASMLKVEKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 529

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGF+SHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 530 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGIL 589

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTAT SGLPANPSNPVSVASGAPT+VFDEILKATPAALIAFLANLPAVDGPTPD+DIVLS
Sbjct: 590 PTATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLS 649

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 650 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 709

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQP+PKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 710 YDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 765

[Close]

BLAST of MELO3C008873T1 vs. NCBI nr
Match: gi|700199750|gb|KGN54908.1| (hypothetical protein Csa_4G594420 [Cucumis sativus])

HSP 1 Score: 558.9 bits (1439), Expect = 5.4e-156
Identity = 282/296 (95.27%), Postives = 290/296 (97.97%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VEKRRKEALSQ GEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ
Sbjct: 402 TYGDLASMLKVEKRRKEALSQTGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 461

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQILGIL 128
           EWLAKNISKNSEKSSLPGGTGFLDTGSAGF+SHSIPSTKVVYPDTSQMVIYDPSQILGIL
Sbjct: 462 EWLAKNISKNSEKSSLPGGTGFLDTGSAGFMSHSIPSTKVVYPDTSQMVIYDPSQILGIL 521

Query: 129 PTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIVLS 188
           PTAT SGLPANPSNPVSVASGAPT+VFDEILKATPAALIAFLANLPAVDGPTPD+DIVLS
Sbjct: 522 PTATASGLPANPSNPVSVASGAPTSVFDEILKATPAALIAFLANLPAVDGPTPDVDIVLS 581

Query: 189 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 248
           VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD
Sbjct: 582 VCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKRKD 641

Query: 249 YDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 305
           YDRQEDNESTTVQSQP+PKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG
Sbjct: 642 YDRQEDNESTTVQSQPMPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGSTG 697

[Close]

BLAST of MELO3C008873T1 vs. NCBI nr
Match: gi|224071487|ref|XP_002303484.1| (suppressor of forked family protein [Populus trichocarpa])

HSP 1 Score: 356.3 bits (913), Expect = 5.3e-95
Identity = 192/298 (64.43%), Postives = 227/298 (76.17%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    S+++VE+RRKEALS+ GEDGAS LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 474 TYGDLASMLKVEQRRKEALSRTGEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQ 533

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQIL--G 128
           EWLAKNI+K +EKS++  G   LD   AG  S+S  S KV+YPDTSQ VIYDP Q L  G
Sbjct: 534 EWLAKNINKKAEKSAVSNGPATLDKIPAGLASNSNVSGKVIYPDTSQTVIYDPRQKLEAG 593

Query: 129 ILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIV 188
           I P+ T SG  A  SNP+S   G   NVFDE+LKATP ALI+FLANLP V+GP P++DIV
Sbjct: 594 IPPSTTASGFKA-ASNPLSNPIGLAPNVFDEVLKATPPALISFLANLPVVEGPAPNVDIV 653

Query: 189 LSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKR 248
           LS+CL+SD+P     KSG T   +  G  P TSDLSGSS+S    + S   TRD+QSGKR
Sbjct: 654 LSICLQSDVPVGKTGKSGTTQTPMLSG--PATSDLSGSSRSRPVPSGSSFKTRDRQSGKR 713

Query: 249 KDYDRQEDNESTTVQSQPLPKDFFRIRQIQKAR-GATSSQTGSASYGSAISGDLSGST 304
           KD DRQE++E+ TVQSQPLP+D FRIRQIQK+R  AT+SQTGS SYGSA+SGDLSGST
Sbjct: 714 KDRDRQEEDETATVQSQPLPRDVFRIRQIQKSRAAATTSQTGSVSYGSALSGDLSGST 768

[Close]

BLAST of MELO3C008873T1 vs. NCBI nr
Match: gi|743847482|ref|XP_011027985.1| (PREDICTED: cleavage stimulation factor subunit 77 [Populus euphratica])

HSP 1 Score: 355.1 bits (910), Expect = 1.2e-94
Identity = 191/297 (64.31%), Postives = 226/297 (76.09%), Query Frame = 1


Query: 9   TFSYSCSLVQVEKRRKEALSQMGEDGASTLESSLQDVVSRYSFMDLWPCTSSDLDNLTRQ 68
           T+    SL++VE+RRKEALS+  EDGAS LESSLQDVVSRYSFMDLWPC+S DLD+L RQ
Sbjct: 474 TYGDLASLLKVEQRRKEALSRTVEDGASALESSLQDVVSRYSFMDLWPCSSKDLDHLARQ 533

Query: 69  EWLAKNISKNSEKSSLPGGTGFLDTGSAGFVSHSIPSTKVVYPDTSQMVIYDPSQIL--G 128
           EWLAKNI+K +EKS++  G   LD   AG  S+S  S KV+Y DTSQMVIYDP Q L  G
Sbjct: 534 EWLAKNINKKAEKSAVSNGPANLDKIPAGLASNSNASGKVIYQDTSQMVIYDPRQKLEAG 593

Query: 129 ILPTATTSGLPANPSNPVSVASGAPTNVFDEILKATPAALIAFLANLPAVDGPTPDIDIV 188
           I P+ T SG  A  SNP+S + G   NVFDE+LKATP ALI+FLANLP V+GP P++DIV
Sbjct: 594 IPPSTTVSGFKA-ASNPLSNSIGLAPNVFDEVLKATPPALISFLANLPIVEGPAPNVDIV 653

Query: 189 LSVCLESDLPTVPLVKSGATPAQVSGGPVPTTSDLSGSSKSHAFSNSSLKHTRDKQSGKR 248
           LS+CL+SD+P     KSG T   +  G  P TSDLSGSS+S    + S   TRD+QSGKR
Sbjct: 654 LSICLQSDVPVGKTGKSGTTQTPMLSG--PATSDLSGSSRSRPVPSGSSFKTRDRQSGKR 713

Query: 249 KDYDRQEDNESTTVQSQPLPKDFFRIRQIQKARGATSSQTGSASYGSAISGDLSGST 304
           KD DRQE++E+ TVQSQPLP+D FRIR IQK+R AT+SQTGS SYGSA+SGDLSGST
Sbjct: 714 KDRDRQEEDETATVQSQPLPRDVFRIRLIQKSRAATTSQTGSVSYGSALSGDLSGST 767

The following BLAST results are available for this feature:

BLAST of MELO3C008873T1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CTF77_ARATH	4.9e-72	51.66	Cleavage stimulation factor subunit 77 OS=Arabidopsis thaliana GN=CSTF77 PE=1 SV...	[more]

BLAST of MELO3C008873T1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZK4_CUCSA	3.8e-156	95.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G594420 PE=4 SV=1	[more]
B9H057_POPTR	3.7e-95	64.43	Suppressor of forked family protein OS=Populus trichocarpa GN=POPTR_0003s10540g ...	[more]
F6H9L6_VITVI	1.8e-94	61.39	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0065g00710 PE=4 SV=...	[more]
A0A067KWM7_JATCU	2.3e-92	60.07	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10295 PE=4 SV=1	[more]
A0A061FQQ9_THECC	5.0e-92	60.13	Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao G...	[more]

BLAST of MELO3C008873T1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17760.1	2.7e-73	51.66	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of MELO3C008873T1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082815\|ref\|XP_008442046.1\|	1.5e-158	97.30	PREDICTED: cleavage stimulation factor subunit 3 [Cucumis melo]	[more]
gi\|778695232\|ref\|XP_011653953.1\|	5.4e-156	95.27	PREDICTED: cleavage stimulation factor subunit 77 isoform X1 [Cucumis sativus]	[more]
gi\|700199750\|gb\|KGN54908.1\|	5.4e-156	95.27	hypothetical protein Csa_4G594420 [Cucumis sativus]	[more]
gi\|224071487\|ref\|XP_002303484.1\|	5.3e-95	64.43	suppressor of forked family protein [Populus trichocarpa]	[more]
gi\|743847482\|ref\|XP_011027985.1\|	1.2e-94	64.31	PREDICTED: cleavage stimulation factor subunit 77 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008847	Suf

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0016458	gene silencing
biological_process	GO:0050794	regulation of cellular process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C008873	MELO3C008873	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
MELO3C008873T1	MELO3C008873T1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
MELO3C008873T1.cds6	MELO3C008873T1.cds6	CDS
MELO3C008873T1.cds5	MELO3C008873T1.cds5	CDS
MELO3C008873T1.cds4	MELO3C008873T1.cds4	CDS
MELO3C008873T1.cds3	MELO3C008873T1.cds3	CDS
MELO3C008873T1.cds2	MELO3C008873T1.cds2	CDS
MELO3C008873T1.cds1	MELO3C008873T1.cds1	CDS

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008847	Suppressor of forked	PFAM	PF05843	Suf	coord: 15..196 score: 7.1
None	No IPR available	PANTHER	PTHR19980	RNA CLEAVAGE STIMULATION FACTOR	coord: 15..277 score: 1.9