MELO3C008634.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008634.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	INO80 complex subunit C
Location	chr05 : 15861506 .. 15868875 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAATTAATCGATTTAAGTATGTTCCCTTCTTTCACCTCTCACCACGCGTGGCAAGGCAGTACGACCGGTCAATTGAATCGGTGATTTTGCAGGCTGCCGCTATGGACTAATCGTTAGGGTTTCTGTTTAACCTTTGAATATCAAAAGTATTTCAGAAATCAGAAGACATTTAATTCAGTATTAAACAAAAGTTTATTAAGATGGAGCCGGAGGTGATAGAAGCAGAGTTAGTGTTGCCGATCCACCTTAATTTCAAACGAATTCAAATGTACGAAAAGTATCCTAAAGGCCAATCTAGAGGCAGGCACTGGAAACATTTGAAGCAAATTCTTCAAGCCGAGAACTATAACAATTACTCCCCTGATGAACCCAACTGTAAGATTTCCTTTTCTCATTTCCATCATTACTCTCTTGCTATTTCTCCTACATTTGATTACGCCTTTGACTTGAGAAGAACTTTGTTTCTTGCTGCTTTGATGCATGGGCTGCGACTTTTTTTTCTTTCATAATTATTTAAGAGGTCAACTCTATGTTTTTAGATGTTAAATGTTTGGGTATTTTTTCAATTTAGTTCACATATATTTTTTCCTTTTACATACTTCCAATTTAGTTTTTGATGAATGTTAGAGTTGCCTATCGATAAATTTACACGGACATAACATGTAGTGAATTTAGGAAAATTTGGAGGGGAAAAATGTCATCTAATATAAGAAAACCTAAACTTCTATCAATTCTAAGAATTTGTCGCTTTCCTCACATTTTTCTCTCTAATTTTTTCCAGTTTGCTTCTTGATTTGTTTCTTTTTTGGAAGCTTTTGAAGTCTCTTTGGTTTGGATTTGGAATAGTCCGCTTTTTAGAGTGAAGGGCTATATTTTAGGAACCACTTGTTTCTTCACTAATGTTTGGGAGATTTGGATTAAGAGGAATCATAGAATTTAGTGAGGGTGAGAGATTTGTGGGGGAGTTGTGGGAAACTATTAGGTTCAATTCCTCTGTTTAGGCCTTGATGCTTAAGGTTTCTGATGCAACCCTTTCTTGTTCTTGCAATTGAGCTGGTTGAGCTGTTTTACCGATTGTATTATTAGTTATTATTTGATTACTTAAATATTTCAGTTATTTGTTATTTTTTATGTGGGTCACCGATACTGCTGAAGTACTCTAGGAAGGGTAAAAAGCGAAGTCCAGAGTGAAAGTTAGTTAGTATGAGGATTGAGACCACCGAGAGATTGTGTGGCAGTGAGTGTGGTCAGTATATGTAATAAAGAGTAGTTGTTGGTAGGGTTATGCTTTTTGGTGATAGGAAAGTACTCAAGAGGAGGGGAGAGAACCAACTCTTTGTAATCGGCTGGAGTGTGAAGCATTAGGGCTATCTTTTGATTATCGAATACTAGTAATAGTAAGGGAATGCTTTACATCTTATTAGCCAACAAATCGGTTGTTAGGTTGATAGACTTATGCCTACTATTATAAATGTTAGCGTGGAATCCCAATCCTTTGGAGGAATTCTCGTGTAAATTTTTCTTTCAAAAACATGTTTGATCATTCTCCTCCTGGTGTCTTGGTCTTCTCAGTTCTTTGTATGATTATGATTCTTTGGAAAATTATGTTCTTTACCTGACATGCTCTTCATGGTTGTGTGAACACGATGGATTAACTGGTTAGGAAATTACCTTTGCTTGTTGGGCTGTTTTGTTTTCTTCTTTATCGGAGGGTGGAAGAAGACTTGGATCATATTCTTTCGTAGTGGAAGCATGCTACTTCTATTTGGGAGCTGCTATTTCAAACATTTGGTTTCTTGGTGGCTGGTCAGAGGGGTACCAAGAGTATGATCAAGGAATTCCTCCTCAATCCGCCATGGAGGGAGAAGTGTTGTTTTTATGCTTGCTGGGGTATGTGCTATTTTATGGTCTTTGTGGGGGATCAAAAGAATAGGACTTTTTGAGGTAGGGGTAGGGACCCCAGTGAGACCTAGTCCCTCATGTTTCTTTGTGGGTTTTGATTTCGAAGACCTTTTGTAACTACTCCACAGGCATTCTTTTGCATAGTAGGAATCCCTTTTTGTAGAAGGGTCCTCTCTTTTGTGGTCTAGGTTTCTTGGTTGCCTGTCCTTGTATTCCTTCCTTTTTGATCAATGAAAGTGGTTGCTTCTAAAAAGAAAAAAGAAAAAAAAAGAAGAAAAAAACGGATATGTTTGAGAGATTCTCTAGCTTCCATACAAAGTGAACAAACTGATCCAGTTCCAAATGTGCATTAATGATTATGTTAATGACATCTTTGATCCTAGGGTGCAATAACTTGCCTTACCAACTTAATATGGTTCTCTACTCTCGTACCAAAACTGCTAGGCCGCCGGTCACACAGGTTTATCATAGAAAGAGAAAGAAGGGTAGGAAGGACATTTCAACGTAGACAAAGGGGTAGTTGGAATGGTCAGTGGTCCCTGGGGGGCACGTGGCAGCAGTGGAGGAAGGATATATAGTGAAAGCTTAGCTAGGGTTGGGGGATTATGAAAGAATGTTTTGAGTGGACTTCCTAGTTCATGAGTGGGAGAGAACAGCCCTCTTACTTGGCTGTACATCATTTTGTGAGGAACTCTTTTGTAATGAATGCTCTTCCGTTATATATATATAAATAACTTCAGTTTGACTTCATTGATCTGAGTATTATACTGCTTATTATTGTGTGTGTGTCGTGCTGCTGTGGTGTTTATTTGTGTTCTGGTGTGTGTTTGTGTGTTGTATAACGTTAACAGGGAGAAGGAAGTCTAACAAAAACATTCCTTAAAACCATAAAATACGTTTTAATCTTGTGCTCATGGCATTTATAACTACATATACTTATATCAACATGTAAACTGTTAACTAACTTTCAGAGGGTACTTTTCCCTTTTAAGCATTTCTACCATAAACTTTCACTACACTGGGAATCTATTAGATAAATCGGCAGGGAAAGGGTGGAATTGAGGAACCCTAAGGGTAGTTACTACTAGTGAAAAGGGCTTTTTTAATATTTCAACAACAATTTTAGGTCTCACAAATATAAGACTGTTCAAATCAGTGCATTGAGTGTAGTTCATGAGGAAAGAAATGAGCTTTTGAGGACAAGCTTCGTCTTTGGTGTCAAACTGGAGCTTTGTGAATTTTATTGATTCACTCAAGGTCTTCTTAATACTGTTGGGATCACTAGTAATTGAGATTCCAGTTTATGTAGCTTTGGTTTATTTTTTTTTCTTGAAGTGGTAATTCCATTGCATGCAAGTTTTCTTTAGGTATAGCTTCCTATTTTCTCAAGGCATGTGTTTTTCCCTGTCAATTTTCTACATGCAAGAAATGGAATAAGAAACAATTTCATTGCTTCAATGAAATTATAAAAGTGGGGGAAGAAAGCTGGCCATTAGCCAAGGAAGATTAGCTCTTCTGCGCAGAGCCTTTATAATTTTCTTGCTGTCCCCATTAGATGAGTTGTTTCCTAAGGCCTTATGGAAGAGAAAAAGCCCACGATGGGTTAATATCCTTGTGTAGATTATGGTTTTTGGTCAGATAAACTGCTCCTCGGTCATGAAAAGGAAGCTCCCCTTCTCACTGATTGCCTTCATCTATTTGCCCACTTTGTGAAGCAGAAGGTGAAGATTTTCAGCACCTATTCTTTGATTGCTCTTATGCTGGCCGATGCTGGTGGAGGTTATTTTCATTCTTTAAAGTCGCTTGGGTGTTCAGTGATATTTTTTGTGCCAGCTTTGAAAACGGGCCCTCGTTGATTTGGGCTAATGCGGTTAGGGCAATGCTTGCTGAAATTAGGTTTAAAAGAAATCAAAGGGGATTCCATGACAAAAGACTTGGGTGGATGGATCATTGTGAATTGGCTCCCCTGAATGCTTCATCTTGGTGCATCTCATCCAAGACTTTTGAAGACTAATCCATTCAAGACTTGTGTTTAAATTAGCATGCTTTTATTTCCCTAGCTTAAGTTTGTAATTGTGTTGTATTGATCTCTTTTGACTGTTTATGCTTTTTGTCCTTATCATGTTTGGACTACTTATGGATATGACAGGACTAAGGGAGTGTCCTAGTTGAGATTCCTAGGTACATCTCCTAATCCCTCGGCTATCTTCACTTTCTTTCTCTCTTGTAATTTGAGTAATAGTTTCATTTCATTATTTTAATGTAGAGGCTTGTTTCCATTAAAATAATAATAATAATAATTATTGCATGGAGCTTTTATAATTTAATTACTGAAAGAAGCTTAAATCTGTACCAAGTAAGAGCCACAAAACTGAGTATTTATGAAACAATCCAAGAGATTTTCTTTGTTGTTGAAGACTCCATTTTTGCTTTATTTTCTTCAAAATGATGCATTATGATCTTTTCTTCCTTATACGCTCAGTTTAACTGATAGTTCCTTTTATTTGTTTTTTAGATGTTAATATTGAGTCACCTCCCTCGATGCATCCATGCAAGAGAATTTGTGATATAACAGGATATGAGGTATGCAACTTTTGGTAGTTTATAACTCAGCATTGCTTTTAAACTAGAATAGAAATTAATTACGGATTCTCTTCTTTATAGCCCATGATTTTGGAATGGTTCTAGAATATAATGGATCTGAACAAGTGATGTATAGAGTGAACTGCATACTTTAGCTTTACTTTGAGCCCAAACCATATTTCTTTATTTATTTTCGTAGTATTTGAAGAAATACCACTCTTGTTTTTCAATATTTCCATATAAATATTTTCAAGCAATTAATTAACTATGTACATTTTCCTAACCTCTTTGATTGTTTTTTTTTTTGTTTGTCTGGAATCAAAATTTCTTGTGAATATCATTTCATTCTAATCTTGTTGAGAGGCATATGTCTTAAAAATTAACTTTTCTTATTAGTTGTATTGCTAATAAAATACTTATAAAAAGTAAGGAATGATTTTTTAAAATACGAACAAGAGGCCTTCTTTTGTATAGTTGGAATCCCTTTTGGTAGATTCTTTTGTATAGTTGGGGTCCCTTTTGGTAGAAGAGTATCTCTTTTGTGGACTTGGTTTTTTTTGTATGCCCGTGCTTGTTTTTTTAATGGGAGTGGTTGTTTCTATATATATAAGAAAAATAAAATACAAATAAGAAGTGAAAAACAGTCATTATCCTTAACTCTGATCGTTTCACTTCAGTAAGTCATGACATTGTAATTCAGGCACCATACTATGACCCTAGGACTACTCTTCGATATGCAAATGCTGATATCTTCAAGGTCATAAGATCACTTCCTAATGAGTACGTCCAGAGGTATTTGGCCATGAGAAATGCAGCGGTAGTTTTAAGGTAATTTCCCAAGTTTCTGAATATATTTCCTTTTGATTAACATTGATTGATGGAACAAAATGCTGATTCAATTCTTTTGACATTTGGATGATGTGACGTGATCTGTAGCTAGTTGGACATATTAGATTTCATTGACCAAGTGATTGGATCAAACTATATTTGATAATCTCTTTTTGGAAATTATATTTTTGGTTCATAAATTTTCACCATCGATCAATCAAATGTCATTTAGATGGCTGCAAGATCACACCACCTTATCCAAATTTGAAGAAATGAATCATGTTTCCATTTTTTTAGTTGTATTGACAATATAGGCTAATTGAAGTTGGCTAAAATCGATTTTAAGGATGGAACTAAAATTTCTAAAGAAATCAAATCATGTGATATGATCTTTTATCATATGAGAAAGAATGGTATAAGTTCAATACGAAACTGCATATGAGAAGATTATTCAATACAATACAATCACGACAGAAATCATGAGGGCGGATTGCAGTCAATACGAGCTGACAGACAAGATCATGAGAAGGCTCAATTAGTCAAAGTCATATTTGAAACTTCTTAACATTCCTTACTAACCAACTACATTGTTCAACAATTAATAGGTAGAGTTGACCAGTATATCCTAACCATCTTTTCCTGAATTACTTGGAAGATGCATTTTGTACGATGTCTAAGGAATTCCAGAATTTAGCTGAAAAACAATGTCACTCGATCATTGATTGCCATCCTCTTTCATTTATGTGGACCTGATAGAGTTCCTTTTACTTTTAGTAGGCCATGAACTAAATTAAAATCGTTCTCAAGATGTAGTATTCAGGTAAAGATAAAAGGTATTGAAAATTTGACTATGAAGTCATGAGGAGCTTGCACTAAAAAAGTGAAAGTCCTCCAAAACTCCTCCCAACCTAACTTAAGTCACCTGTGTTTATTTAAAACTCCTCCCAAACTAACTCAAATTACTGTGTTTATTTAGAACCCGTTTGATAATGTTCTTGTTTGCTGTTTGCTGTTTCTTGTTTCTCATTTTCTAGAAACAGATGTGTTTAGATAACTGTTTTCGTGTCTCGTTTTCAAATTTCAAAGAACTTTTCTAAAAGTTGGACCAAATTTGAGAAACTATGGAAAATAGTTATTCTTACTGTTGTGCCCATTTTATTTAATTCTGTTTCTAATGTGTACCGAGGTCTTTGGCTAGCTCATTGGTGGGGAAGCATGCCTTGGATGATATATGGCTTTCACGCCCTGGGTTCTCCCCCAACTATGATGGTTTTATTTTATTTATTTATTATATGTATATATACGTACATATATATATTTCTTAATTTGTTTTATTTTCTTGCTTTTTATATTTTTATATTTTTTTTATTTTAGATTATTTTTATATTTCTTAATTTTTGTTTTATTTCTTAATTTATTTTATTTTATTTATTTATTTATTTATATTTCTTGATTTGTTTTATTTTTCCCTTCATTTAGTTTTTTTTTTTTTTCATATTTATATATCTAATACAAGAGAAGAATTGATCATCAAACATATTCATGTTTTTAGCTTTCAAAATTTAAGAAGTAGAAAACAAGAAATTAGAAACAAGGAACTAGAATCGAGAAACGAAAATGTTATCAATTGAACACTTACTAGCTTGCAGTTGCATACCGAATTAAAACTAATATGCATGCTAGTTCTACATTTTCCTTTAAGTACTTCAATTTGATGTATCCGAGTCTTACAGGTGAAGATATACAACACTTCTGTCGTCGTCGACTTGCAACCCTTCGAGGATACGAAGTGAAACCATTAAGCTTTCCATGTGGTCGAAGATGCAAAGAGAAACCTGTCAAGTAAGCTCAAAATGTATCATATGTCTATTTATTCTATCATTTTGTGTATTTAATTGTCTTTCCAATTCATGTTCGACTTGGTATTTGTTAGCAAAAGTTGAGTCGGTTACTTAGAAATCTCAAGGCTATCAAACAACCCTAATTGGATTGTAGTTGAGAAAAATTTAAGGTATATTTACGATTTTTTAAGAAATTGACGTGTTTGATAACTA

mRNA sequence

TAAAAATTAATCGATTTAAGTATGTTCCCTTCTTTCACCTCTCACCACGCGTGGCAAGGCAGTACGACCGGTCAATTGAATCGGTGATTTTGCAGGCTGCCGCTATGGACTAATCGTTAGGGTTTCTGTTTAACCTTTGAATATCAAAAGTATTTCAGAAATCAGAAGACATTTAATTCAGTATTAAACAAAAGTTTATTAAGATGGAGCCGGAGGTGATAGAAGCAGAGTTAGTGTTGCCGATCCACCTTAATTTCAAACGAATTCAAATGTACGAAAAGTATCCTAAAGGCCAATCTAGAGGCAGGCACTGGAAACATTTGAAGCAAATTCTTCAAGCCGAGAACTATAACAATTACTCCCCTGATGAACCCAACTATGTTAATATTGAGTCACCTCCCTCGATGCATCCATGCAAGAGAATTTGTGATATAACAGGATATGAGGCACCATACTATGACCCTAGGACTACTCTTCGATATGCAAATGCTGATATCTTCAAGGTCATAAGATCACTTCCTAATGAGTACGTCCAGAGGTATTTGGCCATGAGAAATGCAGCGGTAGTTTTAAGGTGAAGATATACAACACTTCTGTCGTCGTCGACTTGCAACCCTTCGAGGATACGAAGTGAAACCATTAAGCTTTCCATGTGGTCGAAGATGCAAAGAGAAACCTGTCAAGTAAGCTCAAAATGTATCATATGTCTATTTATTCTATCATTTTGTGTATTTAATTGTCTTTCCAATTCATGTTCGACTTGGTATTTGTTAGCAAAAGTTGAGTCGGTTACTTAGAAATCTCAAGGCTATCAAACAACCCTAATTGGATTGTAGTTGAGAAAAATTTAAGGTATATTTACGATTTTTTAAGAAATTGACGTGTTTGATAACTA

Coding sequence (CDS)

ATGGAGCCGGAGGTGATAGAAGCAGAGTTAGTGTTGCCGATCCACCTTAATTTCAAACGAATTCAAATGTACGAAAAGTATCCTAAAGGCCAATCTAGAGGCAGGCACTGGAAACATTTGAAGCAAATTCTTCAAGCCGAGAACTATAACAATTACTCCCCTGATGAACCCAACTATGTTAATATTGAGTCACCTCCCTCGATGCATCCATGCAAGAGAATTTGTGATATAACAGGATATGAGGCACCATACTATGACCCTAGGACTACTCTTCGATATGCAAATGCTGATATCTTCAAGGTCATAAGATCACTTCCTAATGAGTACGTCCAGAGGTATTTGGCCATGAGAAATGCAGCGGTAGTTTTAAGGTGA

Protein sequence

MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAAVVLR

Homology

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BLAST of MELO3C008634.2 vs. NCBI nr
Match: XP_008441777.1 (PREDICTED: INO80 complex subunit C isoform X1 [Cucumis melo] >XP_008441778.1 PREDICTED: INO80 complex subunit C isoform X2 [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 5.8e-52
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV
Sbjct: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 121 VVLR 125
           VVLR
Sbjct: 121 VVLR 124

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BLAST of MELO3C008634.2 vs. NCBI nr
Match: XP_004152811.1 (PREDICTED: INO80 complex subunit C isoform X1 [Cucumis sativus] >XP_011649021.1 PREDICTED: INO80 complex subunit C isoform X2 [Cucumis sativus] >KGN61299.1 hypothetical protein Csa_2G077540 [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 4.9e-51
Identity = 108/124 (87.10%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           ME EVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHW   XXXXX            NYV
Sbjct: 1   MESEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLXXXXXAENYHNYSPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 121 VVLR 125
           VVLR
Sbjct: 121 VVLR 124

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BLAST of MELO3C008634.2 vs. NCBI nr
Match: XP_022937916.1 (INO80 complex subunit C isoform X1 [Cucurbita moschata] >XP_022937917.1 INO80 complex subunit C isoform X1 [Cucurbita moschata] >XP_022937918.1 INO80 complex subunit C isoform X2 [Cucurbita moschata] >XP_022966011.1 INO80 complex subunit C isoform X1 [Cucurbita maxima] >XP_022966012.1 INO80 complex subunit C isoform X1 [Cucurbita maxima] >XP_022966013.1 INO80 complex subunit C isoform X2 [Cucurbita maxima] >XP_023536867.1 INO80 complex subunit C-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 209.9 bits (533), Expect = 4.9e-51
Identity = 102/124 (82.26%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           MEPEVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHW                    NYV
Sbjct: 1   MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSSDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 121 VVLR 125
           VVLR
Sbjct: 121 VVLR 124

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BLAST of MELO3C008634.2 vs. NCBI nr
Match: XP_022144563.1 (INO80 complex subunit C isoform X1 [Momordica charantia] >XP_022144564.1 INO80 complex subunit C isoform X1 [Momordica charantia] >XP_022144565.1 INO80 complex subunit C isoform X2 [Momordica charantia])

HSP 1 Score: 209.1 bits (531), Expect = 8.3e-51
Identity = 100/124 (80.65%), Postives = 103/124 (83.06%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           MEPEVIEAELVLP HLNFKRIQMYEKYPKGQSRGRHW                    NYV
Sbjct: 1   MEPEVIEAELVLPTHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNHSPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCK+ICDITGYEAPYYDPRTTLRYANAD+FKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKKICDITGYEAPYYDPRTTLRYANADVFKVIRSLPNEYVQRYLAMRNAA 120

Query: 121 VVLR 125
           V+LR
Sbjct: 121 VILR 124

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BLAST of MELO3C008634.2 vs. NCBI nr
Match: XP_009366445.1 (PREDICTED: chromatin-remodeling complex subunit ies6 [Pyrus x bretschneideri])

HSP 1 Score: 199.5 bits (506), Expect = 6.6e-48
Identity = 106/124 (85.48%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           MEPEV++AELVLP HL+FKRIQMYEKYPKGQSRGRHW   XXXXXXXXXXXX     NYV
Sbjct: 1   MEPEVVDAELVLPTHLSFKRIQMYEKYPKGQSRGRHWKHLXXXXXXXXXXXXPPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCK+ICDITGYEAPYYDPRT LRYAN DIFK+IRSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKKICDITGYEAPYYDPRTNLRYANTDIFKLIRSLPNEYVQRYLALRNAA 120

Query: 121 VVLR 125
           VVL+
Sbjct: 121 VVLK 124

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BLAST of MELO3C008634.2 vs. TAIR10
Match: AT4G38495.1 (YL1 nuclear, C-terminal (InterPro:IPR013272))

HSP 1 Score: 141.0 bits (354), Expect = 5.0e-34
Identity = 67/124 (54.03%), Postives = 84/124 (67.74%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           ME E++EA++V+   L+FK+ Q YEKYPK QS  R W                     YV
Sbjct: 1   MERELMEADIVVASRLSFKKKQAYEKYPKAQSSSRRWKHLKQILQAENFPDLPPDLPTYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPS  PCKR+CDITGYEAPY DPRT LRYANA +F+ +RSL ++ V +YL++RNAA
Sbjct: 61  NIESPPSTQPCKRLCDITGYEAPYVDPRTNLRYANAHVFQTVRSLSSDQVHQYLSIRNAA 120

Query: 121 VVLR 125
           VVL+
Sbjct: 121 VVLK 124

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BLAST of MELO3C008634.2 vs. TAIR10
Match: AT2G36740.1 (sequence-specific DNA binding transcription factors;DNA binding;DNA binding)

HSP 1 Score: 41.6 bits (96), Expect = 4.2e-04
Identity = 19/35 (54.29%), Postives = 22/35 (62.86%), Query Frame = 0


Query: 69  HPCKRICDITGYEAPYYDPRTTLRYANADIFKVIR 104
           +P K +C ITG  A Y DP+T L YA  D FK IR
Sbjct: 265 YPEKAVCVITGLPAKYRDPKTGLPYATRDAFKAIR 299

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BLAST of MELO3C008634.2 vs. Swiss-Prot
Match: sp|Q9UTE8|IES6_SCHPO (Chromatin-remodeling complex subunit ies6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ies6 PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-11
Identity = 32/67 (47.76%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 58  NYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMR 117
           +Y +IE+PPS+ P  + CD+TG  A Y DP+T LRY N +I+ +IR LP+   Q YL +R
Sbjct: 51  SYSSIEAPPSVLPQPKYCDVTGLLAIYTDPKTRLRYHNKEIYGLIRELPSGADQEYLKLR 110

Query: 118 NAAVVLR 125
           ++ VVL+
Sbjct: 111 SSDVVLK 117

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BLAST of MELO3C008634.2 vs. Swiss-Prot
Match: sp|Q8BHA0|IN80C_MOUSE (INO80 complex subunit C OS=Mus musculus OX=10090 GN=Ino80c PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 58  NYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMR 117
           NY +I++PPS  P K+  DI+G  A Y DP++ LR++  + F  IR LP++ V  YLA+R
Sbjct: 125 NYFSIDAPPSFKPAKKYSDISGLLANYTDPQSKLRFSTVEEFSYIRRLPSDVVTGYLALR 184

Query: 118 NAAVVL 124
            A  ++
Sbjct: 185 KATSIV 190

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BLAST of MELO3C008634.2 vs. Swiss-Prot
Match: sp|Q6PI98|IN80C_HUMAN (INO80 complex subunit C OS=Homo sapiens OX=9606 GN=INO80C PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-09
Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 0


Query: 58  NYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMR 117
           NY +I++PPS  P K+  D++G  A Y DP++ LR++  + F  IR LP++ V  YLA+R
Sbjct: 126 NYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALR 185

Query: 118 NAAVVL 124
            A  ++
Sbjct: 186 KATSIV 191

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BLAST of MELO3C008634.2 vs. Swiss-Prot
Match: sp|Q5BJY3|IN80C_RAT (INO80 complex subunit C OS=Rattus norvegicus OX=10116 GN=Ino80c PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-09
Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0


Query: 58  NYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMR 117
           NY +I++PPS  P K+  D++G  A Y DP++ LR++  + F  IR LP++ V  YL +R
Sbjct: 125 NYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLRFSTVEEFSYIRRLPSDVVTGYLTLR 184

Query: 118 NAAVVL 124
            A  ++
Sbjct: 185 KATSIV 190

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BLAST of MELO3C008634.2 vs. Swiss-Prot
Match: sp|P32617|IES6_YEAST (Chromatin-remodeling complex subunit IES6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IES6 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.8e-08
Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 0


Query: 59  YVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFK-VIRSLPNEYVQRYLAMR 118
           Y ++E+PPS+ P K+ CD+TG +  Y  P   +RY NA+I++ +++ +     Q YL +R
Sbjct: 100 YFSVEAPPSIRPAKKYCDVTGLKGFYKSPTNNIRYHNAEIYQLIVKPMAPGVDQEYLKLR 159

Query: 119 NAAVVLR 125
            A  VL+
Sbjct: 160 GANFVLK 166

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BLAST of MELO3C008634.2 vs. TrEMBL
Match: tr|A0A1S3B479|A0A1S3B479_CUCME (INO80 complex subunit C isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485837 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 3.8e-52
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV
Sbjct: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 121 VVLR 125
           VVLR
Sbjct: 121 VVLR 124

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BLAST of MELO3C008634.2 vs. TrEMBL
Match: tr|A0A0A0LJN6|A0A0A0LJN6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G077540 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 108/124 (87.10%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           ME EVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHW   XXXXX            NYV
Sbjct: 1   MESEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLXXXXXAENYHNYSPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 121 VVLR 125
           VVLR
Sbjct: 121 VVLR 124

[Close]

BLAST of MELO3C008634.2 vs. TrEMBL
Match: tr|A0A2P5EWN4|A0A2P5EWN4_9ROSA (INO80 complex, subunit Ies OS=Trema orientalis OX=63057 GN=TorRG33x02_142210 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-46
Identity = 104/124 (83.87%), Postives = 112/124 (90.32%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           MEPEVIEAELVLP HL+FKRIQMYEKYPKGQSRGRHW   XXXXXXXXXXXX     NYV
Sbjct: 1   MEPEVIEAELVLPTHLSFKRIQMYEKYPKGQSRGRHWKHLXXXXXXXXXXXXPPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCK+ICDITGYEAPY DPRT LRYANA++FK++RSLPNE+VQRYLA RNAA
Sbjct: 61  NIESPPSMHPCKKICDITGYEAPYSDPRTNLRYANAEVFKLVRSLPNEFVQRYLAQRNAA 120

Query: 121 VVLR 125
           VVL+
Sbjct: 121 VVLK 124

[Close]

BLAST of MELO3C008634.2 vs. TrEMBL
Match: tr|A0A151QTB1|A0A151QTB1_CAJCA (INO80 complex subunit C OS=Cajanus cajan OX=3821 GN=KK1_045583 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-46
Identity = 102/124 (82.26%), Postives = 113/124 (91.13%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           ME EV+EAELVLP +L+FKR+QMYEKYPKGQ+RGRHW   XXXXXXXXXXXX     NYV
Sbjct: 1   MEAEVVEAELVLPSYLSFKRVQMYEKYPKGQARGRHWKHLXXXXXXXXXXXXPPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCKRICDITG+EAPYYDPRT LRYANAD+FK+IRSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGFEAPYYDPRTNLRYANADVFKIIRSLPNEYVQRYLALRNAA 120

Query: 121 VVLR 125
           +VL+
Sbjct: 121 IVLK 124

[Close]

BLAST of MELO3C008634.2 vs. TrEMBL
Match: tr|A0A2N9HI07|A0A2N9HI07_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39437 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46
Identity = 107/124 (86.29%), Postives = 116/124 (93.55%), Query Frame = 0


Query: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXXXXXNYV 60
           ME EV++AELVLP HL+FKR+QMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXX    NYV
Sbjct: 1   MEQEVVKAELVLPTHLSFKRVQMYEKYPKGQSRGRHWXXXXXXXXXXXXXXXXPDEPNYV 60

Query: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120
           NIESPPSMHPCKRICDITGYEAPY DPRT LRYANAD+FK++RSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYSDPRTNLRYANADVFKLVRSLPNEYVQRYLALRNAA 120

Query: 121 VVLR 125
           VVL+
Sbjct: 121 VVLK 124

The following BLAST results are available for this feature:

BLAST of MELO3C008634.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441777.1	5.8e-52	100.00	PREDICTED: INO80 complex subunit C isoform X1 [Cucumis melo] >XP_008441778.1 PRE...	[more]
XP_004152811.1	4.9e-51	87.10	PREDICTED: INO80 complex subunit C isoform X1 [Cucumis sativus] >XP_011649021.1 ...	[more]
XP_022937916.1	4.9e-51	82.26	INO80 complex subunit C isoform X1 [Cucurbita moschata] >XP_022937917.1 INO80 co...	[more]
XP_022144563.1	8.3e-51	80.65	INO80 complex subunit C isoform X1 [Momordica charantia] >XP_022144564.1 INO80 c...	[more]
XP_009366445.1	6.6e-48	85.48	PREDICTED: chromatin-remodeling complex subunit ies6 [Pyrus x bretschneideri]	[more]

BLAST of MELO3C008634.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38495.1	5.0e-34	54.03	YL1 nuclear, C-terminal (InterPro:IPR013272)	[more]
AT2G36740.1	4.2e-04	54.29	sequence-specific DNA binding transcription factors;DNA binding;DNA binding	[more]

BLAST of MELO3C008634.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9UTE8\|IES6_SCHPO	4.4e-11	47.76	Chromatin-remodeling complex subunit ies6 OS=Schizosaccharomyces pombe (strain 9...	[more]
sp\|Q8BHA0\|IN80C_MOUSE	1.8e-09	42.42	INO80 complex subunit C OS=Mus musculus OX=10090 GN=Ino80c PE=1 SV=1	[more]
sp\|Q6PI98\|IN80C_HUMAN	3.2e-09	40.91	INO80 complex subunit C OS=Homo sapiens OX=9606 GN=INO80C PE=1 SV=1	[more]
sp\|Q5BJY3\|IN80C_RAT	7.0e-09	39.39	INO80 complex subunit C OS=Rattus norvegicus OX=10116 GN=Ino80c PE=2 SV=1	[more]
sp\|P32617\|IES6_YEAST	7.8e-08	37.31	Chromatin-remodeling complex subunit IES6 OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of MELO3C008634.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B479\|A0A1S3B479_CUCME	3.8e-52	100.00	INO80 complex subunit C isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485837 PE=4 ...	[more]
tr\|A0A0A0LJN6\|A0A0A0LJN6_CUCSA	3.2e-51	87.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G077540 PE=4 SV=1	[more]
tr\|A0A2P5EWN4\|A0A2P5EWN4_9ROSA	1.4e-46	83.87	INO80 complex, subunit Ies OS=Trema orientalis OX=63057 GN=TorRG33x02_142210 PE=...	[more]
tr\|A0A151QTB1\|A0A151QTB1_CAJCA	1.4e-46	82.26	INO80 complex subunit C OS=Cajanus cajan OX=3821 GN=KK1_045583 PE=4 SV=1	[more]
tr\|A0A2N9HI07\|A0A2N9HI07_FAGSY	1.8e-46	86.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39437 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0031011	Ino80 complex

Vocabulary: **Biological Process**
Term	Definition
GO:0006338	chromatin remodeling

Vocabulary: **INTERPRO**
Term	Definition
IPR029525	INO80C/Ies6
IPR013272	Vps72/YL1_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0031011	Ino80 complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008634.2.1	MELO3C008634.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013272	Vps72/YL1, C-terminal	SMART	SM00993	YL1_C_2	coord: 73..102 e-value: 2.1E-12 score: 57.2
IPR013272	Vps72/YL1, C-terminal	PFAM	PF08265	YL1_C	coord: 74..102 e-value: 2.3E-14 score: 52.7
IPR029525	INO80 complex, subunit Ies6	PANTHER	PTHR31200	FAMILY NOT NAMED	coord: 15..123

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008634.2	Csa2G077540	Cucumber (Chinese Long) v2	cumedB135
MELO3C008634.2	CSPI02G07560	Wild cucumber (PI 183967)	cpimedB135
MELO3C008634.2	Cucsa.178270	Cucumber (Gy14) v1	cgymedB316
MELO3C008634.2	CmaCh12G009770	Cucurbita maxima (Rimu)	cmamedB193
MELO3C008634.2	CmoCh12G009800	Cucurbita moschata (Rifu)	cmomedB184
MELO3C008634.2	Lsi11G009020	Bottle gourd (USVL1VR-Ls)	lsimedB125
MELO3C008634.2	Cp4.1LG07g08120	Cucurbita pepo (Zucchini)	cpemedB916
MELO3C008634.2	CsGy2G007800	Cucumber (Gy14) v2	cgybmedB123
MELO3C008634.2	Cla007883	Watermelon (97103) v1	medwmB416
MELO3C008634.2	ClCG11G010360	Watermelon (Charleston Gray)	medwcgB364
MELO3C008634.2	Cla97C11G216590	Watermelon (97103) v2	medwmbB363
MELO3C008634.2	Bhi06G000932	Wax gourd	medwgoB460
MELO3C008634.2	Carg23460	Silver-seed gourd	carmedB0493
MELO3C008634.2	CsaV3_2G009990	Cucumber (Chinese Long) v3	cucmedB137

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008634.2	Cucurbita maxima (Rimu)	cmamedB833
MELO3C008634.2	Cucurbita moschata (Rifu)	cmomedB823
MELO3C008634.2	Cucurbita pepo (Zucchini)	cpemedB131
MELO3C008634.2	Silver-seed gourd	carmedB0173