MELO3C008511 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C008511
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein of unknown function (DUF3511)
Location	chr5 : 11434874 .. 11435206 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACGGGTCCATCGTCGTCCAAACAAGGGTGATCGGAACCTCAAAATCATAGATGTAAGAAAACTAAGCGAAAACAAGATGCACCTAAATCAATCACGTCGTCATTCTACCATTGATCCATCGTCAATGAAACCACGTGCGATCAAGACAACTTCAGAATCCTCGAAAGCATCAACTGTGAAGTTATGGTGGAAGAACTCAGAAATGAAGAGGCGACGACGCGTTGCAAAGTACAAGTTGTATACAGTGGAAGGGAGGGTCAAAGAGTCCATAAGAAAAGGGATAAATTGGTTCAAATGCAGATGTACCAGAATTATTTCTGGATTTTGA

mRNA sequence

ATGGAACGGGTCCATCGTCGTCCAAACAAGGGTGATCGGAACCTCAAAATCATAGATGTAAGAAAACTAAGCGAAAACAAGATGCACCTAAATCAATCACGTCGTCATTCTACCATTGATCCATCGTCAATGAAACCACGTGCGATCAAGACAACTTCAGAATCCTCGAAAGCATCAACTGTGAAGTTATGGTGGAAGAACTCAGAAATGAAGAGGCGACGACGCGTTGCAAAGTACAAGTTGTATACAGTGGAAGGGAGGGTCAAAGAGTCCATAAGAAAAGGGATAAATTGGTTCAAATGCAGATGTACCAGAATTATTTCTGGATTTTGA

Coding sequence (CDS)

ATGGAACGGGTCCATCGTCGTCCAAACAAGGGTGATCGGAACCTCAAAATCATAGATGTAAGAAAACTAAGCGAAAACAAGATGCACCTAAATCAATCACGTCGTCATTCTACCATTGATCCATCGTCAATGAAACCACGTGCGATCAAGACAACTTCAGAATCCTCGAAAGCATCAACTGTGAAGTTATGGTGGAAGAACTCAGAAATGAAGAGGCGACGACGCGTTGCAAAGTACAAGTTGTATACAGTGGAAGGGAGGGTCAAAGAGTCCATAAGAAAAGGGATAAATTGGTTCAAATGCAGATGTACCAGAATTATTTCTGGATTTTGA

Protein sequence

MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKASTVKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF*

Homology

[Close]

BLAST of MELO3C008511 vs. TrEMBL
Match: A0A0A0LL30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.5e-41
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 1


Query: 1   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 60
           ME VHRRPNKGDRNL+IIDVRKLSENK+HLNQS R ST++PSS+KPR +KT SESSK S 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 111
            K W K  E+KRRRRVAKYKLYTVEG+VK+SIRKGINWFKC+ TRI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of MELO3C008511 vs. TrEMBL
Match: A0A0A0L7N5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-30
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1


Query: 1   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    KT SE SK+  
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60

Query: 61  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 111
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RIISGF
Sbjct: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of MELO3C008511 vs. TrEMBL
Match: M5W2H8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 4.5e-14
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 1


Query: 11  GDRNLKIIDVRKLSENK-MHLNQSRRHSTIDPSSMKPR---------AIKTTSESSKAST 70
           G RNL +++VR+LSEN+ M++ +S    +  P  MK R           K    SSK S 
Sbjct: 13  GCRNLDMVNVRRLSENRTMYMGRSHLDPSWAPYPMKTRQRDIQLRIGGKKPKERSSKPS- 72

Query: 71  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRII 108
            KLWW + E KRR RVA+YKLY  EG+VK S++KG  WFK +C  I+
Sbjct: 73  -KLWWNDPEFKRRGRVARYKLYGAEGKVKRSLKKGYRWFKRKCLEIV 117

[Close]

BLAST of MELO3C008511 vs. TrEMBL
Match: A0A067H7X9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045042mg PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.4e-13
Identity = 42/105 (40.00%), Postives = 68/105 (64.76%), Query Frame = 1


Query: 6   RRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKASTVKLW- 65
           +RP  GDR L+I+ V   S     +  ++ ++T D   + PR  + + ++S    +K W 
Sbjct: 10  QRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDAS----LKPWG 69

Query: 66  WKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISG 110
           + + EMKRR+R+AKYK+YTVEG+VK S+RKG+ W K +C++I+ G
Sbjct: 70  FTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110

[Close]

BLAST of MELO3C008511 vs. TrEMBL
Match: M4FHE8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-12
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 1


Query: 10  KGDRNLKIIDVRKLSENK-----MHLNQSRRHSTIDP---SSMKPRAIKTTSESSKASTV 69
           +G RNL+++D   L   +         ++R   T DP    S K   +K+    S + T+
Sbjct: 16  EGGRNLQLVDPADLKPVRGIYVVRESKRNRSPMTSDPWRKISYKDMPVKSRRPPSHSKTL 75

Query: 70  KLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISG 110
           K WW + E+KR+RRVAKYKLY+ EG+VK+S++K   W K +C +II G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKVKKSLKKSYKWIKIQCAKIIHG 123

[Close]

BLAST of MELO3C008511 vs. TAIR10
Match: AT3G05725.1 (AT3G05725.1 Protein of unknown function (DUF3511))

HSP 1 Score: 75.9 bits (185), Expect = 1.8e-14
Identity = 40/108 (37.04%), Postives = 63/108 (58.33%), Query Frame = 1


Query: 10  KGDRNLKIIDVR--KLSENKMHLNQSRRHSTIDPS------SMKPRAIKTTSESSKASTV 69
           +GDRNL++++    KL      + +SRR+ +   +      S K   ++    SS ++  
Sbjct: 16  EGDRNLQLVNPADLKLVRGIYVVRESRRNRSPIKTDIWRKMSYKDMPVRPRRSSSHSTLF 75

Query: 70  KLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISG 110
           K WW + E+KR+RRVAKYKLY+ EG++K ++RK   W K +C++II G
Sbjct: 76  KGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of MELO3C008511 vs. TAIR10
Match: AT2G47480.1 (AT2G47480.1 Protein of unknown function (DUF3511))

HSP 1 Score: 58.2 bits (139), Expect = 3.9e-09
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1


Query: 41  PSSMKPRAIKTTSESSKASTVKLWW-KNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWF 100
           PS   P        S+ +S++++    ++EMKR++R+A+YK YTVEG+VK +++ G  W 
Sbjct: 40  PSLPPPPGKVAAGRSNASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWI 99

Query: 101 KCRCTRIISGF 111
           K +C +I+  F
Sbjct: 100 KNKCCQIVHRF 110

[Close]

BLAST of MELO3C008511 vs. TAIR10
Match: AT3G62640.1 (AT3G62640.1 Protein of unknown function (DUF3511))

HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08
Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 1


Query: 40  DPSSMKPRAIKTTSESSKASTVKLWWK--NSEMKRRRRVAKYKLYTVEGRVKESIRKGIN 99
           D    +P        +SK  T    W+  ++E KR++R+A YK Y +EG+VK +++KG +
Sbjct: 39  DSPKFQPSIPPPPGSTSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFH 98

Query: 100 WFKCRCTRIISG 110
           W K R + II G
Sbjct: 99  WIKDRYSHIIHG 110

[Close]

BLAST of MELO3C008511 vs. TAIR10
Match: AT2G19460.1 (AT2G19460.1 Protein of unknown function (DUF3511))

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06
Identity = 22/69 (31.88%), Postives = 39/69 (56.52%), Query Frame = 1


Query: 41  PSSMKPRAIKTTSESSKASTVKLW-WKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWF 100
           P    P+  +++S SS       W + + +++R++RV  Y+ YTVEG++K S RK   W 
Sbjct: 55  PEDQNPKKGRSSSSSS-------WGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWI 114

Query: 101 KCRCTRIIS 109
           K +C ++++
Sbjct: 115 KDKCNKLLN 116

[Close]

BLAST of MELO3C008511 vs. TAIR10
Match: AT1G72720.1 (AT1G72720.1 Protein of unknown function (DUF3511))

HSP 1 Score: 48.9 bits (115), Expect = 2.3e-06
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 1


Query: 68  SEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISG 110
           +E++R++RVA Y +Y VEGRVK S++K   WFK  C+  + G
Sbjct: 84  AEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETCSNAVYG 125

[Close]

BLAST of MELO3C008511 vs. NCBI nr
Match: gi|659082109|ref|XP_008441676.1| (PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo])

HSP 1 Score: 226.5 bits (576), Expect = 2.3e-56
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 1


Query: 1   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 60
           MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 111
           VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of MELO3C008511 vs. NCBI nr
Match: gi|700206328|gb|KGN61447.1| (hypothetical protein Csa_2G123580 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 2.1e-41
Identity = 86/110 (78.18%), Postives = 97/110 (88.18%), Query Frame = 1


Query: 1   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 60
           ME VHRRPNKGDRNL+IIDVRKLSENK+HLNQS R ST++PSS+KPR +KT SESSK S 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 111
            K W K  E+KRRRRVAKYKLYTVEG+VK+SIRKGINWFKC+ TRI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of MELO3C008511 vs. NCBI nr
Match: gi|700201003|gb|KGN56136.1| (hypothetical protein Csa_3G077700 [Cucumis sativus])

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-30
Identity = 68/110 (61.82%), Postives = 85/110 (77.27%), Query Frame = 1


Query: 1   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 60
           ME +H  PNKG R+L++IDVRKLS NK++LNQS+R + +DPS +K    KT SE SK+  
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60

Query: 61  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 111
            K WWK  EM+RR+RVAKYKLY VEG+VK SI+KGI W K +C+RIISGF
Sbjct: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of MELO3C008511 vs. NCBI nr
Match: gi|659126920|ref|XP_008463430.1| (PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo])

HSP 1 Score: 135.6 bits (340), Expect = 5.4e-29
Identity = 67/110 (60.91%), Postives = 83/110 (75.45%), Query Frame = 1


Query: 1   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 60
           ME +H   NKG R+L+++DVRKLSENKM+LNQS+R + +DPS +K R +  T E SK   
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVK-RYVTKTWEPSKMK- 60

Query: 61  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 111
            K WWK  EMKRR+RVAKYKLY VEG+VK SI+KG  W K +C+RIISGF
Sbjct: 61  -KSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of MELO3C008511 vs. NCBI nr
Match: gi|595833761|ref|XP_007206730.1| (hypothetical protein PRUPE_ppa024789mg [Prunus persica])

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-14
Identity = 48/107 (44.86%), Postives = 64/107 (59.81%), Query Frame = 1


Query: 11  GDRNLKIIDVRKLSENK-MHLNQSRRHSTIDPSSMKPR---------AIKTTSESSKAST 70
           G RNL +++VR+LSEN+ M++ +S    +  P  MK R           K    SSK S 
Sbjct: 13  GCRNLDMVNVRRLSENRTMYMGRSHLDPSWAPYPMKTRQRDIQLRIGGKKPKERSSKPS- 72

Query: 71  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRII 108
            KLWW + E KRR RVA+YKLY  EG+VK S++KG  WFK +C  I+
Sbjct: 73  -KLWWNDPEFKRRGRVARYKLYGAEGKVKRSLKKGYRWFKRKCLEIV 117

The following BLAST results are available for this feature:

BLAST of MELO3C008511 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL30_CUCSA	1.5e-41	78.18	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123580 PE=4 SV=1	[more]
A0A0A0L7N5_CUCSA	1.2e-30	61.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G077700 PE=4 SV=1	[more]
M5W2H8_PRUPE	4.5e-14	44.86	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024789mg PE=4 SV=1	[more]
A0A067H7X9_CITSI	8.4e-13	40.00	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g045042mg PE=4 SV=1	[more]
M4FHE8_BRARP	1.1e-12	38.89	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of MELO3C008511 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G05725.1	1.8e-14	37.04	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	3.9e-09	36.62	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	2.5e-08	36.11	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	1.8e-06	31.88	Protein of unknown function (DUF3511)	[more]
AT1G72720.1	2.3e-06	47.62	Protein of unknown function (DUF3511)	[more]

BLAST of MELO3C008511 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659082109\|ref\|XP_008441676.1\|	2.3e-56	100.00	PREDICTED: uncharacterized protein LOC103485754 [Cucumis melo]	[more]
gi\|700206328\|gb\|KGN61447.1\|	2.1e-41	78.18	hypothetical protein Csa_2G123580 [Cucumis sativus]	[more]
gi\|700201003\|gb\|KGN56136.1\|	1.7e-30	61.82	hypothetical protein Csa_3G077700 [Cucumis sativus]	[more]
gi\|659126920\|ref\|XP_008463430.1\|	5.4e-29	60.91	PREDICTED: uncharacterized protein LOC103501594 [Cucumis melo]	[more]
gi\|595833761\|ref\|XP_007206730.1\|	6.4e-14	44.86	hypothetical protein PRUPE_ppa024789mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021899	DUF3511

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C008511T1	MELO3C008511T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 65..109 score: 1.8
None	No IPR available	PANTHER	PTHR33193	FAMILY NOT NAMED	coord: 64..110 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C008511	Csa2G123580	Cucumber (Chinese Long) v2	cumeB143
MELO3C008511	Cla000987	Watermelon (97103) v1	mewmB442
MELO3C008511	Bhi12G001192	Wax gourd	mewgoB448
MELO3C008511	Cucsa.266180	Cucumber (Gy14) v1	cgymeB445
MELO3C008511	CmaCh15G014410	Cucurbita maxima (Rimu)	cmameB277
MELO3C008511	CmoCh15G015180	Cucurbita moschata (Rifu)	cmomeB268
MELO3C008511	Lsi09G010790	Bottle gourd (USVL1VR-Ls)	lsimeB028
MELO3C008511	CsGy2G009170	Cucumber (Gy14) v2	cgybmeB114
MELO3C008511	Carg19740	Silver-seed gourd	carmeB0845
MELO3C008511	CsaV3_2G011280	Cucumber (Chinese Long) v3	cucmeB135

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C008511	Wild cucumber (PI 183967)	cpimeB133
MELO3C008511	Watermelon (Charleston Gray)	mewcgB391
MELO3C008511	Cucurbita pepo (Zucchini)	cpemeB173
MELO3C008511	Watermelon (97103) v2	mewmbB392