MELO3C007635.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C007635.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Description60S ribosomal protein L26-1
Locationchr08 : 4278154 .. 4278594 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTACAATCCGAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCTCCGTCCAGCGTTCGTCGGGTTATCATGAGTGCTCCTCTCTCGACTGACCTCCGGTCAAAGTACAACGTACGATCTATGCCGATTCGGAAGGATGACGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGACGTGAGGGCAAGGTAGTGCAGGTGTATCGTAGGAAGTGGATTATCCACATCGAGCGCATTACAAGGGAAAAGGTTAACGGTTCCACTGTCAACGTCGGCATCAAACCCTCGAAGGTCGTGATTACGAAGCTCAGGTTGGACAAGGACCGTAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGCGCCGCCGCCGACAAGGATAAGGGTACCAAATTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA

mRNA sequence

ATGAAGTACAATCCGAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCTCCGTCCAGCGTTCGTCGGGTTATCATGAGTGCTCCTCTCTCGACTGACCTCCGGTCAAAGTACAACGTACGATCTATGCCGATTCGGAAGGATGACGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGACGTGAGGGCAAGGTAGTGCAGGTGTATCGTAGGAAGTGGATTATCCACATCGAGCGCATTACAAGGGAAAAGGTTAACGGTTCCACTGTCAACGTCGGCATCAAACCCTCGAAGGTCGTGATTACGAAGCTCAGGTTGGACAAGGACCGTAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGCGCCGCCGCCGACAAGGATAAGGGTACCAAATTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA

Coding sequence (CDS)

ATGAAGTACAATCCGAGGGTTTCCAGTTCCCGCCGCAAGAGCCGCAAGGCTCATTTTTCGGCTCCGTCCAGCGTTCGTCGGGTTATCATGAGTGCTCCTCTCTCGACTGACCTCCGGTCAAAGTACAACGTACGATCTATGCCGATTCGGAAGGATGACGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGACGTGAGGGCAAGGTAGTGCAGGTGTATCGTAGGAAGTGGATTATCCACATCGAGCGCATTACAAGGGAAAAGGTTAACGGTTCCACTGTCAACGTCGGCATCAAACCCTCGAAGGTCGTGATTACGAAGCTCAGGTTGGACAAGGACCGTAAGTCACTTCTGGATCGTAAAGGCAAGGGCCGCGCCGCCGCCGACAAGGATAAGGGTACCAAATTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA

Protein sequence

MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDRKGKGRAAADKDKGTKFTAEDIMQSVD
Homology
[Close]
BLAST of MELO3C007635.2 vs. NCBI nr
Match: XP_004141862.1 (PREDICTED: 60S ribosomal protein L26-1 [Cucumis sativus] >XP_008440392.1 PREDICTED: 60S ribosomal protein L26-1 [Cucumis melo] >KGN48613.1 hypothetical protein Csa_6G495670 [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 1.7e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           KGKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. NCBI nr
Match: XP_022950899.1 (60S ribosomal protein L26-1 [Cucurbita moschata] >XP_022978626.1 60S ribosomal protein L26-1 [Cucurbita maxima] >XP_023543127.1 60S ribosomal protein L26-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.5 bits (698), Expect = 4.2e-70
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYR+KW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           KGKGRAA+DKDKGTKFTAEDIMQSVD
Sbjct: 121 KGKGRAASDKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. NCBI nr
Match: XP_022963400.1 (60S ribosomal protein L26-1-like [Cucurbita moschata] >XP_023003724.1 60S ribosomal protein L26-1-like [Cucurbita maxima] >XP_023517131.1 60S ribosomal protein L26-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272.3 bits (695), Expect = 9.4e-70
Identity = 142/146 (97.26%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLS DLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSNDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           KGKGRAAADKDKGTKF+AEDIMQSVD
Sbjct: 121 KGKGRAAADKDKGTKFSAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. NCBI nr
Match: XP_022132426.1 (60S ribosomal protein L26-1 [Momordica charantia])

HSP 1 Score: 271.2 bits (692), Expect = 2.1e-69
Identity = 141/146 (96.58%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. NCBI nr
Match: XP_016720131.1 (PREDICTED: 60S ribosomal protein L26-1 [Gossypium hirsutum] >XP_017623657.1 PREDICTED: 60S ribosomal protein L26-1 [Gossypium arboreum] >PPD90443.1 hypothetical protein GOBAR_DD12629 [Gossypium barbadense] >PPR91561.1 hypothetical protein GOBAR_AA29119 [Gossypium barbadense])

HSP 1 Score: 269.6 bits (688), Expect = 6.1e-69
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHF+APSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADKDKGTKF+AEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFSAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. TAIR10
Match: AT3G49910.1 (Translation protein SH3-like family protein)

HSP 1 Score: 255.0 bits (650), Expect = 2.8e-68
Identity = 129/146 (88.36%), Postives = 142/146 (97.26%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+PSKVVITKLRLDKDRKSLL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADK+KGTKFT+ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]
BLAST of MELO3C007635.2 vs. TAIR10
Match: AT5G67510.1 (Translation protein SH3-like family protein)

HSP 1 Score: 243.8 bits (621), Expect = 6.5e-65
Identity = 122/146 (83.56%), Postives = 140/146 (95.89%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           T+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  S V+ITKLRLDKDRKSLL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K  GRAAADK+KGTKF+AED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

[Close]
BLAST of MELO3C007635.2 vs. Swiss-Prot
Match: sp|P51414|RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2)

HSP 1 Score: 255.0 bits (650), Expect = 5.1e-67
Identity = 129/146 (88.36%), Postives = 142/146 (97.26%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRV+SSRRK+RKAHF+A SS RRVIMS+PLSTDLR KYNVRSMPIRKDDEVQ+VRG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNG+TVNVGI+PSKVVITKLRLDKDRKSLL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADK+KGTKFT+ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]
BLAST of MELO3C007635.2 vs. Swiss-Prot
Match: sp|Q9FJX2|RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-63
Identity = 122/146 (83.56%), Postives = 140/146 (95.89%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NPRVSSSRRK+RKAHF+APSSVRRV+MS+PLS DLR+K+NVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           T+KGREGKV+QVYRRKW+IHIERITREKVNGSTVNVG+  S V+ITKLRLDKDRKSLL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K  GRAAADK+KGTKF+AED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

[Close]
BLAST of MELO3C007635.2 vs. Swiss-Prot
Match: sp|Q39411|RL26_BRACM (60S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 2.4e-61
Identity = 119/145 (82.07%), Postives = 135/145 (93.10%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRV+SSRR++RK HF+A SS RRV MS+PLSTDLR KYNVRSMPIRKDDE Q+VRG
Sbjct: 1   MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGK+ QVYRRK +IHIER+TREKVNG+TVNVG++P+KVVITKLRLDKDRKSLL+R
Sbjct: 61  TYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLER 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSV 146
           K KGRAAADKDKGTKFTA D+MQ+V
Sbjct: 121 KAKGRAAADKDKGTKFTAVDVMQNV 145

[Close]
BLAST of MELO3C007635.2 vs. Swiss-Prot
Match: sp|P12749|RL26_RAT (60S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-44
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLD 120
            YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI+PSKVVIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIRPSKVVITRLKLDKDRKKILE 120

Query: 121 RKGKGRAAADKDKGTKFTAEDI 142
           RK K R    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]
BLAST of MELO3C007635.2 vs. Swiss-Prot
Match: sp|P61257|RL26_BOVIN (60S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.1e-44
Identity = 96/142 (67.61%), Postives = 118/142 (83.10%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MK+NP V+S R K+RK HF+APS +RR IMS+PLS +LR KYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGRE-GKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLD 120
            YKG++ GKVVQVYR+K++I+IER+ REK NG+TV+VGI PSKVVIT+L+LDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKGKGRAAADKDKGTKFTAEDI 142
           RK K R    K+KG K+  E I
Sbjct: 121 RKAKSRQVG-KEKG-KYKEETI 140

[Close]
BLAST of MELO3C007635.2 vs. TrEMBL
Match: tr|A0A1S3B106|A0A1S3B106_CUCME (60S ribosomal protein L26-1 OS=Cucumis melo OX=3656 GN=LOC103484854 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           KGKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. TrEMBL
Match: tr|A0A0A0KGI0|A0A0A0KGI0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495670 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           KGKGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. TrEMBL
Match: tr|A0A2P5RUI9|A0A2P5RUI9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA29119 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.0e-69
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHF+APSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADKDKGTKF+AEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFSAEDIMQSVD 146

[Close]
BLAST of MELO3C007635.2 vs. TrEMBL
Match: tr|A0A1U8LZY4|A0A1U8LZY4_GOSHI (60S ribosomal protein L26-1 OS=Gossypium hirsutum OX=3635 GN=LOC107932587 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.0e-69
Identity = 139/146 (95.21%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRKSRKAHF+APSSVRRV+MSAPLSTDLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSTDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADKDKGTKF+AEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFSAEDIMQSVD 146

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BLAST of MELO3C007635.2 vs. TrEMBL
Match: tr|A0A1R3I630|A0A1R3I630_COCAP (Ribosomal protein L26/L24P, eukaryotic/archaeal OS=Corchorus capsularis OX=210143 GN=CCACVL1_14727 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.3e-69
Identity = 138/146 (94.52%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVIMSAPLSTDLRSKYNVRSMPIRKDDEVQVVRG 60
           MKYNPRVSSSRRK+RKAHFSAPSSVRR++MSAPLS+DLRSKYNVRSMP+RKDDEVQVVRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSSDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVVITKLRLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVVITKLRLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KGKGRAAADKDKGTKFTAEDIMQSVD 147
           K KGRAAADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

The following BLAST results are available for this feature:
BLAST of MELO3C007635.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141862.11.7e-71100.00PREDICTED: 60S ribosomal protein L26-1 [Cucumis sativus] >XP_008440392.1 PREDICT... [more]
XP_022950899.14.2e-7097.2660S ribosomal protein L26-1 [Cucurbita moschata] >XP_022978626.1 60S ribosomal p... [more]
XP_022963400.19.4e-7097.2660S ribosomal protein L26-1-like [Cucurbita moschata] >XP_023003724.1 60S riboso... [more]
XP_022132426.12.1e-6996.5860S ribosomal protein L26-1 [Momordica charantia][more]
XP_016720131.16.1e-6995.21PREDICTED: 60S ribosomal protein L26-1 [Gossypium hirsutum] >XP_017623657.1 PRED... [more]
BLAST of MELO3C007635.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49910.12.8e-6888.36Translation protein SH3-like family protein[more]
AT5G67510.16.5e-6583.56Translation protein SH3-like family protein[more]
BLAST of MELO3C007635.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P51414|RL261_ARATH5.1e-6788.3660S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2[more]
sp|Q9FJX2|RL262_ARATH1.2e-6383.5660S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1[more]
sp|Q39411|RL26_BRACM2.4e-6182.0760S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1[more]
sp|P12749|RL26_RAT2.7e-4467.6160S ribosomal protein L26 OS=Rattus norvegicus OX=10116 GN=Rpl26 PE=1 SV=1[more]
sp|P61257|RL26_BOVIN6.1e-4467.6160S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1[more]
BLAST of MELO3C007635.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B106|A0A1S3B106_CUCME1.1e-71100.0060S ribosomal protein L26-1 OS=Cucumis melo OX=3656 GN=LOC103484854 PE=4 SV=1[more]
tr|A0A0A0KGI0|A0A0A0KGI0_CUCSA1.1e-71100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G495670 PE=4 SV=1[more]
tr|A0A2P5RUI9|A0A2P5RUI9_GOSBA4.0e-6995.21Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA29119 PE=3 SV... [more]
tr|A0A1U8LZY4|A0A1U8LZY4_GOSHI4.0e-6995.2160S ribosomal protein L26-1 OS=Gossypium hirsutum OX=3635 GN=LOC107932587 PE=3 S... [more]
tr|A0A1R3I630|A0A1R3I630_COCAP5.3e-6994.52Ribosomal protein L26/L24P, eukaryotic/archaeal OS=Corchorus capsularis OX=21014... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
GO:0015934large ribosomal subunit
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR008991Translation_prot_SH3-like_sf
IPR005825Ribosomal_L24/26_CS
IPR014722Rib_L2_dom2
IPR005756Ribosomal_L26/L24P_euk/arc
IPR005824KOW
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0042273 ribosomal large subunit biogenesis
cellular_component GO:0005622 intracellular
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0022625 cytosolic large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C007635.2.1MELO3C007635.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 48..75
e-value: 7.4E-6
score: 35.5
IPR005824KOWPFAMPF00467KOWcoord: 51..82
e-value: 9.9E-10
score: 37.9
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealTIGRFAMTIGR01080TIGR01080coord: 8..122
e-value: 1.1E-50
score: 168.8
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPFAMPF16906Ribosomal_L26coord: 8..121
e-value: 2.2E-38
score: 130.5
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPANTHERPTHR1114360S RIBOSOMAL PROTEIN L26 FAMILY MEMBERcoord: 1..146
IPR014722Ribosomal protein L2, domain 2GENE3DG3DSA:2.30.30.30coord: 1..144
e-value: 5.5E-57
score: 193.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR11143:SF1360S RIBOSOMAL PROTEIN L26-1-RELATEDcoord: 1..146
NoneNo IPR availableCDDcd06089KOW_RPL26coord: 52..105
e-value: 1.80611E-13
score: 60.6062
IPR005825Ribosomal protein L24/L26, conserved sitePROSITEPS01108RIBOSOMAL_L24coord: 52..69
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILYSSF50104Translation proteins SH3-like domaincoord: 8..125

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C007635.2Csa6G495670Cucumber (Chinese Long) v2cumedB483
MELO3C007635.2CSPI06G28920Wild cucumber (PI 183967)cpimedB493
MELO3C007635.2Cucsa.103210Cucumber (Gy14) v1cgymedB131
MELO3C007635.2CmaCh03G009150Cucurbita maxima (Rimu)cmamedB703
MELO3C007635.2CmoCh07G006580Cucurbita moschata (Rifu)cmomedB896
MELO3C007635.2Lsi01G008930Bottle gourd (USVL1VR-Ls)lsimedB163
MELO3C007635.2Cp4.1LG19g10590Cucurbita pepo (Zucchini)cpemedB531
MELO3C007635.2Cp4.1LG10g02120Cucurbita pepo (Zucchini)cpemedB080
MELO3C007635.2CsGy6G028390Cucumber (Gy14) v2cgybmedB440
MELO3C007635.2Cla014030Watermelon (97103) v1medwmB559
MELO3C007635.2ClCG01G017590Watermelon (Charleston Gray)medwcgB509
MELO3C007635.2Cla97C01G016760Watermelon (97103) v2medwmbB505
MELO3C007635.2Bhi03G000794Wax gourdmedwgoB643
MELO3C007635.2Carg00789Silver-seed gourdcarmedB0418
MELO3C007635.2Carg18547Silver-seed gourdcarmedB0003
MELO3C007635.2CsaV3_6G044130Cucumber (Chinese Long) v3cucmedB505
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C007635.2Silver-seed gourdcarmedB0335
MELO3C007635.2Silver-seed gourdcarmedB0390
MELO3C007635.2Silver-seed gourdcarmedB0466
MELO3C007635.2Silver-seed gourdcarmedB0782
MELO3C007635.2Cucumber (Chinese Long) v3cucmedB148
MELO3C007635.2Cucumber (Chinese Long) v3cucmedB325
MELO3C007635.2Watermelon (97103) v2medwmbB547
MELO3C007635.2Wax gourdmedwgoB630
MELO3C007635.2Cucumber (Gy14) v2cgybmedB130
MELO3C007635.2Cucumber (Gy14) v2cgybmedB283
MELO3C007635.2Cucumber (Gy14) v1cgymedB572
MELO3C007635.2Cucumber (Gy14) v1cgymedB643
MELO3C007635.2Cucurbita maxima (Rimu)cmamedB045
MELO3C007635.2Cucurbita maxima (Rimu)cmamedB200
MELO3C007635.2Cucurbita maxima (Rimu)cmamedB363
MELO3C007635.2Cucurbita maxima (Rimu)cmamedB801
MELO3C007635.2Cucurbita maxima (Rimu)cmamedB907
MELO3C007635.2Cucurbita moschata (Rifu)cmomedB036
MELO3C007635.2Cucurbita moschata (Rifu)cmomedB349
MELO3C007635.2Cucurbita moschata (Rifu)cmomedB190
MELO3C007635.2Cucurbita moschata (Rifu)cmomedB509
MELO3C007635.2Cucurbita moschata (Rifu)cmomedB694
MELO3C007635.2Cucurbita moschata (Rifu)cmomedB800
MELO3C007635.2Cucurbita pepo (Zucchini)cpemedB250
MELO3C007635.2Cucurbita pepo (Zucchini)cpemedB507
MELO3C007635.2Cucurbita pepo (Zucchini)cpemedB874
MELO3C007635.2Cucurbita pepo (Zucchini)cpemedB923
MELO3C007635.2Wild cucumber (PI 183967)cpimedB146
MELO3C007635.2Wild cucumber (PI 183967)cpimedB317
MELO3C007635.2Cucumber (Chinese Long) v2cumedB146
MELO3C007635.2Cucumber (Chinese Long) v2cumedB315
MELO3C007635.2Melon (DHL92) v3.6.1medmedB126
MELO3C007635.2Melon (DHL92) v3.6.1medmedB153
MELO3C007635.2Bottle gourd (USVL1VR-Ls)lsimedB351
MELO3C007635.2Bottle gourd (USVL1VR-Ls)lsimedB509
MELO3C007635.2Watermelon (Charleston Gray)medwcgB536
MELO3C007635.2Watermelon (Charleston Gray)medwcgB542
MELO3C007635.2Watermelon (97103) v1medwmB545