MELO3C007445 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C007445
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_12
Location	chr8 : 2838671 .. 2839442 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACACACACACACACTCACACTCATCACAAAACCAAAAAAAAAAAACCCCATCTCTCCCCATTCTCTTATATATAAACCTTAACAAAAATCAATCATTTCCCCTATGGGTTGGGAAGAAATTAGAAAGGATAATCAAGAAGCATCTGTGGTTGTTCATTCCTCTTCCATTGCTTTACTTCAAGAAAGATTCAGACAACTTCAAAAAGTGAAGGAGATGAGAGAAGAAAGAGAGGTTGTGAAATTGCTCTCTCTCTCTCAATACCCTAAGACACACAGTTGTTGCAGCTTCTTCTTCAATAATACCAATACAAATACAAATACTTGTGTGGTTTTTGAGCCTTCAATTTCAAATAGTAGTCCTCATCATGAGTTAATGATGACGATGAAGAAGAAGAAGGTACCATCATCATCATCATCAACAACGACAATGCTAACATTGCTGCCTCAAACATCCCTATCTCTTTCCTTAACTACTTCTTCTTCACACGATCATGATCATCAACAATCCAACAATATCCCAACTTTGATGGATTTATGGCCAGTGCCTTCCAGTACTTCTACAACTTCTTCTTCTTGTGATAGTGCCATCTCATTCATTTCTAAACTAAATGATCATGATCATCATGATCGCGACCATCATTACTTTGACTCTGATATCGAAGTCGATACTTCTCTTCACTTGTAAACATCATTCTCTCTCTCTCTTTCTCTTGATCGACTTTATCGTACTAGAGTTGATTATTAATTCATATGATCAGTTCTCAGTTTTGT

mRNA sequence

CACACACACACACACTCACACTCATCACAAAACCAAAAAAAAAAAACCCCATCTCTCCCCATTCTCTTATATATAAACCTTAACAAAAATCAATCATTTCCCCTATGGGTTGGGAAGAAATTAGAAAGGATAATCAAGAAGCATCTGTGGTTGTTCATTCCTCTTCCATTGCTTTACTTCAAGAAAGATTCAGACAACTTCAAAAAGTGAAGGAGATGAGAGAAGAAAGAGAGGTTGTGAAATTGCTCTCTCTCTCTCAATACCCTAAGACACACAGTTGTTGCAGCTTCTTCTTCAATAATACCAATACAAATACAAATACTTGTGTGGTTTTTGAGCCTTCAATTTCAAATAGTAGTCCTCATCATGAGTTAATGATGACGATGAAGAAGAAGAAGGTACCATCATCATCATCATCAACAACGACAATGCTAACATTGCTGCCTCAAACATCCCTATCTCTTTCCTTAACTACTTCTTCTTCACACGATCATGATCATCAACAATCCAACAATATCCCAACTTTGATGGATTTATGGCCAGTGCCTTCCAGTACTTCTACAACTTCTTCTTCTTGTGATAGTGCCATCTCATTCATTTCTAAACTAAATGATCATGATCATCATGATCGCGACCATCATTACTTTGACTCTGATATCGAAGTCGATACTTCTCTTCACTTGTAAACATCATTCTCTCTCTCTCTTTCTCTTGATCGACTTTATCGTACTAGAGTTGATTATTAATTCATATGATCAGTTCTCAGTTTTGT

Coding sequence (CDS)

ATGGGTTGGGAAGAAATTAGAAAGGATAATCAAGAAGCATCTGTGGTTGTTCATTCCTCTTCCATTGCTTTACTTCAAGAAAGATTCAGACAACTTCAAAAAGTGAAGGAGATGAGAGAAGAAAGAGAGGTTGTGAAATTGCTCTCTCTCTCTCAATACCCTAAGACACACAGTTGTTGCAGCTTCTTCTTCAATAATACCAATACAAATACAAATACTTGTGTGGTTTTTGAGCCTTCAATTTCAAATAGTAGTCCTCATCATGAGTTAATGATGACGATGAAGAAGAAGAAGGTACCATCATCATCATCATCAACAACGACAATGCTAACATTGCTGCCTCAAACATCCCTATCTCTTTCCTTAACTACTTCTTCTTCACACGATCATGATCATCAACAATCCAACAATATCCCAACTTTGATGGATTTATGGCCAGTGCCTTCCAGTACTTCTACAACTTCTTCTTCTTGTGATAGTGCCATCTCATTCATTTCTAAACTAAATGATCATGATCATCATGATCGCGACCATCATTACTTTGACTCTGATATCGAAGTCGATACTTCTCTTCACTTGTAA

Protein sequence

MGWEEIRKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNTNTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSSHDHDHQQSNNIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIEVDTSLHL*

Homology

[Close]

BLAST of MELO3C007445 vs. TrEMBL
Match: A0A0A0KJS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511110 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.9e-97
Identity = 177/195 (90.77%), Postives = 192/195 (98.46%), Query Frame = 1


Query: 1   MGWEEIRKDNQEA-SVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSC 60
           MGWE+IRKDNQEA SV++HSSSIALLQERFRQLQKVKEMREE+EVVKLLSLSQYPKTH+C
Sbjct: 1   MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC 60

Query: 61  CSFFFNNTNTN-TNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSL 120
           CSFFFNNTNTN TNTCVVFEPSISN++PHHELMMTMKKKKVPSSSS+TTTMLTLLPQTSL
Sbjct: 61  CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL 120

Query: 121 SLSLTTSSSHDHDHQQSNNIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDH 180
           SLSLT+SSSHDHDHQQSNNIPTLMDLWPVP+S+++T+SSCDSAISFI+KLNDHDHHD DH
Sbjct: 121 SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH 180

Query: 181 HYFDSDIEVDTSLHL 194
           HYFDSDIEVDTSLHL
Sbjct: 181 HYFDSDIEVDTSLHL 195

[Close]

BLAST of MELO3C007445 vs. TrEMBL
Match: W9SFE8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000264 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.0e-14
Identity = 70/191 (36.65%), Postives = 98/191 (51.31%), Query Frame = 1


Query: 7   RKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNN 66
           R+ + +   VVHSS IALLQERFRQLQ+VKE+REERE++++LS       H+      NN
Sbjct: 3   REIHDQTHAVVHSS-IALLQERFRQLQRVKEVREERELLRILS------EHN----INNN 62

Query: 67  TNTNTNTCVVFEPS-ISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTS 126
            N   N  ++ EPS +   S HH     +   ++ SS S+    L+L P    +L  ++S
Sbjct: 63  NNLMNNPTMICEPSRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSS 122

Query: 127 SSHDHDHQQSNNIPT---LMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFD 186
           +S D  +  S N  T   +M LWP+ +      S   S  S +    DHD+ D       
Sbjct: 123 ASEDQYYCSSINDQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD------- 167

Query: 187 SDIEVDTSLHL 194
               VDTSLHL
Sbjct: 183 ----VDTSLHL 167

[Close]

BLAST of MELO3C007445 vs. TrEMBL
Match: W9QDY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010582 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 7.8e-14
Identity = 69/191 (36.13%), Postives = 97/191 (50.79%), Query Frame = 1


Query: 7   RKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNN 66
           R+ + +   VVHSS IALLQERFRQLQ+VKE+REERE++++LS       H+      NN
Sbjct: 3   REIHDQTHAVVHSS-IALLQERFRQLQRVKEVREERELLRILS------EHN----INNN 62

Query: 67  TNTNTNTCVVFEP-SISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTS 126
            N   N  ++ EP  +   S HH     +   ++ SS S+    L+L P    +L  ++S
Sbjct: 63  NNLMNNPTMICEPLRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSS 122

Query: 127 SSHDHDHQQSNNIPT---LMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFD 186
           +S D  +  S N  T   +M LWP+ +      S   S  S +    DHD+ D       
Sbjct: 123 ASEDQYYCSSINDQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD------- 167

Query: 187 SDIEVDTSLHL 194
               VDTSLHL
Sbjct: 183 ----VDTSLHL 167

[Close]

BLAST of MELO3C007445 vs. TrEMBL
Match: G7IPB5_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g026510 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-10
Identity = 68/186 (36.56%), Postives = 92/186 (49.46%), Query Frame = 1


Query: 8   KDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNT 67
           ++N + ++VVHSS IALLQERFRQL++VKEMREERE+ K+L+    PK            
Sbjct: 3   RENHDPTIVVHSS-IALLQERFRQLERVKEMREERELKKMLN---EPK----------QF 62

Query: 68  NTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSS 127
           N+NT     ++ S    S +HEL+       +PS SS         P  SLSL  TTS  
Sbjct: 63  NSNTIPSYDYDQSTRLFSSNHELI-------IPSKSSP--------PHVSLSLWPTTSQQ 122

Query: 128 HDHDHQQSNNIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIEV 187
            D+     +         PV  +  TT+ + +   S+       + HD D     SD  V
Sbjct: 123 DDYYTSMKS---------PVSMNLCTTNYTKNLQTSW------KNGHDCDS---PSDSGV 141

Query: 188 DTSLHL 194
           DTSLHL
Sbjct: 183 DTSLHL 141

[Close]

BLAST of MELO3C007445 vs. TrEMBL
Match: A0A059CF52_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01438 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.0e-10
Identity = 69/187 (36.90%), Postives = 87/187 (46.52%), Query Frame = 1


Query: 16  VVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNTNTNTNTCV 75
           +V  SSIALLQERFRQLQKVKEMREER+ +KLL                    T  N+ V
Sbjct: 10  IVIQSSIALLQERFRQLQKVKEMREERQTLKLL--------------------TEPNSKV 69

Query: 76  V---FEPSISNSSP-----HHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSS 135
           +     P  S+  P     HH  MM       P+ SS         PQ  LSLSL  SS 
Sbjct: 70  LSPTASPPPSHCEPLGFFFHHPEMMV--NNIYPACSSP--------PQ--LSLSLWPSSR 129

Query: 136 HDHDHQQSNNIPTLM-DLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIE 194
            ++ H +    P L+  LWPV +++   SS         +K  ++DH D          +
Sbjct: 130 SNYSHLRFGETPALVTSLWPVETTSLRVSS---------TKYKEYDHFD----------D 145

[Close]

BLAST of MELO3C007445 vs. NCBI nr
Match: gi|700193840|gb|KGN49044.1| (hypothetical protein Csa_6G511110 [Cucumis sativus])

HSP 1 Score: 363.2 bits (931), Expect = 2.8e-97
Identity = 177/195 (90.77%), Postives = 192/195 (98.46%), Query Frame = 1


Query: 1   MGWEEIRKDNQEA-SVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSC 60
           MGWE+IRKDNQEA SV++HSSSIALLQERFRQLQKVKEMREE+EVVKLLSLSQYPKTH+C
Sbjct: 1   MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC 60

Query: 61  CSFFFNNTNTN-TNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSL 120
           CSFFFNNTNTN TNTCVVFEPSISN++PHHELMMTMKKKKVPSSSS+TTTMLTLLPQTSL
Sbjct: 61  CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL 120

Query: 121 SLSLTTSSSHDHDHQQSNNIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDH 180
           SLSLT+SSSHDHDHQQSNNIPTLMDLWPVP+S+++T+SSCDSAISFI+KLNDHDHHD DH
Sbjct: 121 SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH 180

Query: 181 HYFDSDIEVDTSLHL 194
           HYFDSDIEVDTSLHL
Sbjct: 181 HYFDSDIEVDTSLHL 195

[Close]

BLAST of MELO3C007445 vs. NCBI nr
Match: gi|703163013|ref|XP_010113201.1| (hypothetical protein L484_000264 [Morus notabilis])

HSP 1 Score: 87.4 bits (215), Expect = 2.9e-14
Identity = 70/191 (36.65%), Postives = 98/191 (51.31%), Query Frame = 1


Query: 7   RKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNN 66
           R+ + +   VVHSS IALLQERFRQLQ+VKE+REERE++++LS       H+      NN
Sbjct: 3   REIHDQTHAVVHSS-IALLQERFRQLQRVKEVREERELLRILS------EHN----INNN 62

Query: 67  TNTNTNTCVVFEPS-ISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTS 126
            N   N  ++ EPS +   S HH     +   ++ SS S+    L+L P    +L  ++S
Sbjct: 63  NNLMNNPTMICEPSRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSS 122

Query: 127 SSHDHDHQQSNNIPT---LMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFD 186
           +S D  +  S N  T   +M LWP+ +      S   S  S +    DHD+ D       
Sbjct: 123 ASEDQYYCSSINDQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD------- 167

Query: 187 SDIEVDTSLHL 194
               VDTSLHL
Sbjct: 183 ----VDTSLHL 167

[Close]

BLAST of MELO3C007445 vs. NCBI nr
Match: gi|703066129|ref|XP_010087631.1| (hypothetical protein L484_010582 [Morus notabilis])

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13
Identity = 69/191 (36.13%), Postives = 97/191 (50.79%), Query Frame = 1


Query: 7   RKDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNN 66
           R+ + +   VVHSS IALLQERFRQLQ+VKE+REERE++++LS       H+      NN
Sbjct: 3   REIHDQTHAVVHSS-IALLQERFRQLQRVKEVREERELLRILS------EHN----INNN 62

Query: 67  TNTNTNTCVVFEP-SISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTS 126
            N   N  ++ EP  +   S HH     +   ++ SS S+    L+L P    +L  ++S
Sbjct: 63  NNLMNNPTMICEPLRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSS 122

Query: 127 SSHDHDHQQSNNIPT---LMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFD 186
           +S D  +  S N  T   +M LWP+ +      S   S  S +    DHD+ D       
Sbjct: 123 ASEDQYYCSSINDQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD------- 167

Query: 187 SDIEVDTSLHL 194
               VDTSLHL
Sbjct: 183 ----VDTSLHL 167

[Close]

BLAST of MELO3C007445 vs. NCBI nr
Match: gi|1009107295|ref|XP_015878993.1| (PREDICTED: uncharacterized protein LOC107415217 [Ziziphus jujuba])

HSP 1 Score: 77.0 bits (188), Expect = 4.0e-11
Identity = 63/184 (34.24%), Postives = 91/184 (49.46%), Query Frame = 1


Query: 15  VVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNTNTNTNTC 74
           + +HSS IALLQERFRQLQ++KEMRE +E++++L +    +  S         + N N  
Sbjct: 9   IAIHSS-IALLQERFRQLQRMKEMREGKELIRMLVVEPNKQKQS---------DINLNPT 68

Query: 75  VVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSSHDHDHQQ 134
           + FEP                 K  P+    T  +  +  Q SLSL     S+ + +  +
Sbjct: 69  LYFEP----------------PKSFPNPDFLTPQIRPISQQDSLSLWQNLRSNMNIEDFR 128

Query: 135 SNNI-----PTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIEVDT 194
              I     PTLM+LWPV + T ++S++  S+ S I K  D           DSD +VDT
Sbjct: 129 GIEISCCVPPTLMNLWPV-NDTPSSSNASSSSSSNIYKFEDS----------DSDSDVDT 155

[Close]

BLAST of MELO3C007445 vs. NCBI nr
Match: gi|357447997|ref|XP_003594274.1| (hypothetical protein MTR_2g026510 [Medicago truncatula])

HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10
Identity = 68/186 (36.56%), Postives = 92/186 (49.46%), Query Frame = 1


Query: 8   KDNQEASVVVHSSSIALLQERFRQLQKVKEMREEREVVKLLSLSQYPKTHSCCSFFFNNT 67
           ++N + ++VVHSS IALLQERFRQL++VKEMREERE+ K+L+    PK            
Sbjct: 3   RENHDPTIVVHSS-IALLQERFRQLERVKEMREERELKKMLN---EPK----------QF 62

Query: 68  NTNTNTCVVFEPSISNSSPHHELMMTMKKKKVPSSSSSTTTMLTLLPQTSLSLSLTTSSS 127
           N+NT     ++ S    S +HEL+       +PS SS         P  SLSL  TTS  
Sbjct: 63  NSNTIPSYDYDQSTRLFSSNHELI-------IPSKSSP--------PHVSLSLWPTTSQQ 122

Query: 128 HDHDHQQSNNIPTLMDLWPVPSSTSTTSSSCDSAISFISKLNDHDHHDRDHHYFDSDIEV 187
            D+     +         PV  +  TT+ + +   S+       + HD D     SD  V
Sbjct: 123 DDYYTSMKS---------PVSMNLCTTNYTKNLQTSW------KNGHDCDS---PSDSGV 141

Query: 188 DTSLHL 194
           DTSLHL
Sbjct: 183 DTSLHL 141

The following BLAST results are available for this feature:

BLAST of MELO3C007445 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJS5_CUCSA	1.9e-97	90.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511110 PE=4 SV=1	[more]
W9SFE8_9ROSA	2.0e-14	36.65	Uncharacterized protein OS=Morus notabilis GN=L484_000264 PE=4 SV=1	[more]
W9QDY3_9ROSA	7.8e-14	36.13	Uncharacterized protein OS=Morus notabilis GN=L484_010582 PE=4 SV=1	[more]
G7IPB5_MEDTR	2.3e-10	36.56	Uncharacterized protein OS=Medicago truncatula GN=MTR_2g026510 PE=4 SV=1	[more]
A0A059CF52_EUCGR	4.0e-10	36.90	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01438 PE=4 SV=1	[more]

BLAST of MELO3C007445 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700193840\|gb\|KGN49044.1\|	2.8e-97	90.77	hypothetical protein Csa_6G511110 [Cucumis sativus]	[more]
gi\|703163013\|ref\|XP_010113201.1\|	2.9e-14	36.65	hypothetical protein L484_000264 [Morus notabilis]	[more]
gi\|703066129\|ref\|XP_010087631.1\|	1.1e-13	36.13	hypothetical protein L484_010582 [Morus notabilis]	[more]
gi\|1009107295\|ref\|XP_015878993.1\|	4.0e-11	34.24	PREDICTED: uncharacterized protein LOC107415217 [Ziziphus jujuba]	[more]
gi\|357447997\|ref\|XP_003594274.1\|	3.4e-10	36.56	hypothetical protein MTR_2g026510 [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C007445T1	MELO3C007445T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 22..42 scor
None	No IPR available	PANTHER	PTHR34570	FAMILY NOT NAMED	coord: 8..96 score: 5.0E-19coord: 187..193 score: 5.0E-19coord: 113..170 score: 5.0
None	No IPR available	PANTHER	PTHR34570:SF2	SUBFAMILY NOT NAMED	coord: 8..96 score: 5.0E-19coord: 187..193 score: 5.0E-19coord: 113..170 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C007445	Csa6G511110	Cucumber (Chinese Long) v2	cumeB507
MELO3C007445	Cla014395	Watermelon (97103) v1	mewmB572
MELO3C007445	ClCG01G021350	Watermelon (Charleston Gray)	mewcgB515
MELO3C007445	Cla97C01G020930	Watermelon (97103) v2	mewmbB515
MELO3C007445	Bhi03G000511	Wax gourd	mewgoB635
MELO3C007445	CSPI06G32900	Wild cucumber (PI 183967)	cpimeB512
MELO3C007445	Cucsa.044680	Cucumber (Gy14) v1	cgymeB027
MELO3C007445	Lsi01G004900	Bottle gourd (USVL1VR-Ls)	lsimeB149
MELO3C007445	CsaV3_6G048360	Cucumber (Chinese Long) v3	cucmeB520

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C007445	Cucurbita moschata (Rifu)	cmomeB600
MELO3C007445	Cucurbita moschata (Rifu)	cmomeB782
MELO3C007445	Cucurbita pepo (Zucchini)	cpemeB071
MELO3C007445	Cucurbita pepo (Zucchini)	cpemeB457
MELO3C007445	Cucumber (Gy14) v2	cgybmeB445
MELO3C007445	Silver-seed gourd	carmeB0413
MELO3C007445	Silver-seed gourd	carmeB0642
MELO3C007445	Cucurbita maxima (Rimu)	cmameB611
MELO3C007445	Cucurbita maxima (Rimu)	cmameB798