Cucsa.044680 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.044680
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionUnknown protein
Locationscaffold00542 : 903660 .. 904247 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGGGAAGATATTAGAAAGGATAATCAAGAAGCTGCATCTGTGCTTCTTCATTCCTCTTCCATTGCTTTACTTCAAGAAAGGTTCAGACAACTTCAAAAAGTGAAGGAGATGAGAGAAGAAAAAGAGGTTGTCAAATTGCTTTCTCTCTCTCAATACCCTAAAACGCATACTTGTTGCAGCTTCTTCTTCAATAATACCAATACAAATAGTACAAATACTTGTGTGGTTTTTGAGCCTTCAATTTCAAATAATAACCCTCATCATGAGTTAATGATGACGATGAAGAAGAAGAAGGTACCATCGTCGTCGTCAACAACAACGACAATGCTAACATTGCTGCCTCAAACATCTTTATCTCTTTCTTTAACTTCTTCTTCTTCACACGATCATGATCATCAACAATCCAACAATATCCCCACTTTGATGGATTTATGGCCAGTGCCAGCTTCTAGTACTTCTACAACTTCTTCTTGTGATAGTGCCATCTCATTCATTACTAAACTAAATGATCATGATCATCATGATCACGACCATCATTACTTTGACTCTGATATCGAAGTCGATACTTCTCTTCACTTGTAA

mRNA sequence

ATGGGTTGGGAAGATATTAGAAAGGATAATCAAGAAGCTGCATCTGTGCTTCTTCATTCCTCTTCCATTGCTTTACTTCAAGAAAGGTTCAGACAACTTCAAAAAGTGAAGGAGATGAGAGAAGAAAAAGAGGTTGTCAAATTGCTTTCTCTCTCTCAATACCCTAAAACGCATACTTGTTGCAGCTTCTTCTTCAATAATACCAATACAAATAGTACAAATACTTGTGTGGTTTTTGAGCCTTCAATTTCAAATAATAACCCTCATCATGAGTTAATGATGACGATGAAGAAGAAGAAGGTACCATCGTCGTCGTCAACAACAACGACAATGCTAACATTGCTGCCTCAAACATCTTTATCTCTTTCTTTAACTTCTTCTTCTTCACACGATCATGATCATCAACAATCCAACAATATCCCCACTTTGATGGATTTATGGCCAGTGCCAGCTTCTAGTACTTCTACAACTTCTTCTTGTGATAGTGCCATCTCATTCATTACTAAACTAAATGATCATGATCATCATGATCACGACCATCATTACTTTGACTCTGATATCGAAGTCGATACTTCTCTTCACTTGTAA

Coding sequence (CDS)

ATGGGTTGGGAAGATATTAGAAAGGATAATCAAGAAGCTGCATCTGTGCTTCTTCATTCCTCTTCCATTGCTTTACTTCAAGAAAGGTTCAGACAACTTCAAAAAGTGAAGGAGATGAGAGAAGAAAAAGAGGTTGTCAAATTGCTTTCTCTCTCTCAATACCCTAAAACGCATACTTGTTGCAGCTTCTTCTTCAATAATACCAATACAAATAGTACAAATACTTGTGTGGTTTTTGAGCCTTCAATTTCAAATAATAACCCTCATCATGAGTTAATGATGACGATGAAGAAGAAGAAGGTACCATCGTCGTCGTCAACAACAACGACAATGCTAACATTGCTGCCTCAAACATCTTTATCTCTTTCTTTAACTTCTTCTTCTTCACACGATCATGATCATCAACAATCCAACAATATCCCCACTTTGATGGATTTATGGCCAGTGCCAGCTTCTAGTACTTCTACAACTTCTTCTTGTGATAGTGCCATCTCATTCATTACTAAACTAAATGATCATGATCATCATGATCACGACCATCATTACTTTGACTCTGATATCGAAGTCGATACTTCTCTTCACTTGTAA

Protein sequence

MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL*
Homology
[Close]
BLAST of Cucsa.044680 vs. TrEMBL
Match: A0A0A0KJS5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511110 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 1.9e-108
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1 

Query: 1   MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC 60
           MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC
Sbjct: 1   MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC 60

Query: 61  CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL 120
           CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL
Sbjct: 61  CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL 120

Query: 121 SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH 180
           SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH
Sbjct: 121 SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH 180

Query: 181 HYFDSDIEVDTSLHL 196
           HYFDSDIEVDTSLHL
Sbjct: 181 HYFDSDIEVDTSLHL 195

[Close]
BLAST of Cucsa.044680 vs. TrEMBL
Match: W9SFE8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000264 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13
Identity = 64/179 (35.75%), Postives = 90/179 (50.28%), Query Frame = 1 

Query: 21  SSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFE 80
           SSIALLQERFRQLQ+VKE+REE+E++++LS               NN N    N  ++ E
Sbjct: 15  SSIALLQERFRQLQRVKEVREERELLRILS-----------EHNINNNNNLMNNPTMICE 74

Query: 81  PS-ISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNN 140
           PS +  ++ HH     +   ++ SS S     L+L P    +L  +SS+S D  +  S N
Sbjct: 75  PSRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSSASEDQYYCSSIN 134

Query: 141 IPT---LMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 196
             T   +M LWP+   + +  S   S  S +    DHD+ D           VDTSLHL
Sbjct: 135 DQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD-----------VDTSLHL 167

[Close]
BLAST of Cucsa.044680 vs. TrEMBL
Match: W9QDY3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010582 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-12
Identity = 63/179 (35.20%), Postives = 89/179 (49.72%), Query Frame = 1 

Query: 21  SSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFE 80
           SSIALLQERFRQLQ+VKE+REE+E++++LS               NN N    N  ++ E
Sbjct: 15  SSIALLQERFRQLQRVKEVREERELLRILS-----------EHNINNNNNLMNNPTMICE 74

Query: 81  P-SISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNN 140
           P  +  ++ HH     +   ++ SS S     L+L P    +L  +SS+S D  +  S N
Sbjct: 75  PLRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSSASEDQYYCSSIN 134

Query: 141 IPT---LMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 196
             T   +M LWP+   + +  S   S  S +    DHD+ D           VDTSLHL
Sbjct: 135 DQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD-----------VDTSLHL 167

[Close]
BLAST of Cucsa.044680 vs. TrEMBL
Match: A0A059CF52_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01438 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.1e-11
Identity = 69/190 (36.32%), Postives = 86/190 (45.26%), Query Frame = 1 

Query: 12  EAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTN 71
           E+   ++  SSIALLQERFRQLQKVKEMREE++ +KLL                  T  N
Sbjct: 5   ESNDPIVIQSSIALLQERFRQLQKVKEMREERQTLKLL------------------TEPN 64

Query: 72  STNTCVVFEPSISNNNP-----HHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTS 131
           S        P  S+  P     HH  MM       P+ SS         PQ  LSLSL  
Sbjct: 65  SKVLSPTASPPPSHCEPLGFFFHHPEMMV--NNIYPACSSP--------PQ--LSLSLWP 124

Query: 132 SSSHDHDHQQSNNIPTLM-DLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDS 191
           SS  ++ H +    P L+  LWPV  +S   +S         TK  ++DH D        
Sbjct: 125 SSRSNYSHLRFGETPALVTSLWPVETTSLRVSS---------TKYKEYDHFD-------- 145

Query: 192 DIEVDTSLHL 196
             +VDTSLHL
Sbjct: 185 --DVDTSLHL 145

[Close]
BLAST of Cucsa.044680 vs. TrEMBL
Match: M5WKJ7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023210mg PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.4e-08
Identity = 58/190 (30.53%), Postives = 88/190 (46.32%), Query Frame = 1 

Query: 9   DNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNT 68
           D +   + ++HSS IALLQERFRQLQ+VK MREE+E++++L+L      H          
Sbjct: 8   DGESHDATVIHSS-IALLQERFRQLQRVKAMREEREILRMLALCDSEPKHKQL-LMMMKM 67

Query: 69  NTNSTNTCVVFEPSISN---NNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLT 128
           NT++    V  +P+      +  HH+L+     +     SS +   ++L P         
Sbjct: 68  NTSNPIPTVHNKPAAERLFFHPDHHDLI-----QPHGHGSSESGISVSLWP-------AL 127

Query: 129 SSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDS 188
            S   D+   +S   P L++LWP    S + T S D+               +     D 
Sbjct: 128 QSKHEDYILYRSTETPLLINLWP----SVTDTPSLDTC-------------SNKFQGSDC 166

Query: 189 DIEVDTSLHL 196
           D +VDTSLHL
Sbjct: 188 DSDVDTSLHL 166

[Close]
BLAST of Cucsa.044680 vs. NCBI nr
Match: gi|700193840|gb|KGN49044.1| (hypothetical protein Csa_6G511110 [Cucumis sativus])

HSP 1 Score: 399.8 bits (1026), Expect = 2.7e-108
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1 

Query: 1   MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC 60
           MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC
Sbjct: 1   MGWEDIRKDNQEAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTC 60

Query: 61  CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL 120
           CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL
Sbjct: 61  CSFFFNNTNTNSTNTCVVFEPSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSL 120

Query: 121 SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH 180
           SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH
Sbjct: 121 SLSLTSSSSHDHDHQQSNNIPTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDH 180

Query: 181 HYFDSDIEVDTSLHL 196
           HYFDSDIEVDTSLHL
Sbjct: 181 HYFDSDIEVDTSLHL 195

[Close]
BLAST of Cucsa.044680 vs. NCBI nr
Match: gi|703163013|ref|XP_010113201.1| (hypothetical protein L484_000264 [Morus notabilis])

HSP 1 Score: 83.2 bits (204), Expect = 5.6e-13
Identity = 64/179 (35.75%), Postives = 90/179 (50.28%), Query Frame = 1 

Query: 21  SSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFE 80
           SSIALLQERFRQLQ+VKE+REE+E++++LS               NN N    N  ++ E
Sbjct: 15  SSIALLQERFRQLQRVKEVREERELLRILS-----------EHNINNNNNLMNNPTMICE 74

Query: 81  PS-ISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNN 140
           PS +  ++ HH     +   ++ SS S     L+L P    +L  +SS+S D  +  S N
Sbjct: 75  PSRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSSASEDQYYCSSIN 134

Query: 141 IPT---LMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 196
             T   +M LWP+   + +  S   S  S +    DHD+ D           VDTSLHL
Sbjct: 135 DQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD-----------VDTSLHL 167

[Close]
BLAST of Cucsa.044680 vs. NCBI nr
Match: gi|703066129|ref|XP_010087631.1| (hypothetical protein L484_010582 [Morus notabilis])

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-12
Identity = 63/179 (35.20%), Postives = 89/179 (49.72%), Query Frame = 1 

Query: 21  SSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFE 80
           SSIALLQERFRQLQ+VKE+REE+E++++LS               NN N    N  ++ E
Sbjct: 15  SSIALLQERFRQLQRVKEVREERELLRILS-----------EHNINNNNNLMNNPTMICE 74

Query: 81  P-SISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNN 140
           P  +  ++ HH     +   ++ SS S     L+L P    +L  +SS+S D  +  S N
Sbjct: 75  PLRLVFHSDHHHHHHHLIFPQIRSSPSAPQVSLSLWP----ALQCSSSASEDQYYCSSIN 134

Query: 141 IPT---LMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 196
             T   +M LWP+   + +  S   S  S +    DHD+ D           VDTSLHL
Sbjct: 135 DQTPLLMMKLWPLDTHAPAEFSEASSDKSHLDSDPDHDYSD-----------VDTSLHL 167

[Close]
BLAST of Cucsa.044680 vs. NCBI nr
Match: gi|629112138|gb|KCW77098.1| (hypothetical protein EUGRSUZ_D01438 [Eucalyptus grandis])

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 69/190 (36.32%), Postives = 86/190 (45.26%), Query Frame = 1 

Query: 12  EAASVLLHSSSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTN 71
           E+   ++  SSIALLQERFRQLQKVKEMREE++ +KLL                  T  N
Sbjct: 5   ESNDPIVIQSSIALLQERFRQLQKVKEMREERQTLKLL------------------TEPN 64

Query: 72  STNTCVVFEPSISNNNP-----HHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTS 131
           S        P  S+  P     HH  MM       P+ SS         PQ  LSLSL  
Sbjct: 65  SKVLSPTASPPPSHCEPLGFFFHHPEMMV--NNIYPACSSP--------PQ--LSLSLWP 124

Query: 132 SSSHDHDHQQSNNIPTLM-DLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDS 191
           SS  ++ H +    P L+  LWPV  +S   +S         TK  ++DH D        
Sbjct: 125 SSRSNYSHLRFGETPALVTSLWPVETTSLRVSS---------TKYKEYDHFD-------- 145

Query: 192 DIEVDTSLHL 196
             +VDTSLHL
Sbjct: 185 --DVDTSLHL 145

[Close]
BLAST of Cucsa.044680 vs. NCBI nr
Match: gi|1009107295|ref|XP_015878993.1| (PREDICTED: uncharacterized protein LOC107415217 [Ziziphus jujuba])

HSP 1 Score: 72.4 bits (176), Expect = 9.9e-10
Identity = 63/180 (35.00%), Postives = 88/180 (48.89%), Query Frame = 1 

Query: 21  SSIALLQERFRQLQKVKEMREEKEVVKLLSLSQYPKTHTCCSFFFNNTNTNSTNTCVVFE 80
           SSIALLQERFRQLQ++KEMRE KE++++L +    +         ++ N N T   + FE
Sbjct: 13  SSIALLQERFRQLQRMKEMREGKELIRMLVVEPNKQKQ-------SDINLNPT---LYFE 72

Query: 81  PSISNNNPHHELMMTMKKKKVPSSSSTTTTMLTLLPQTSLSLSLTSSSSHDHDHQQSNNI 140
           P                 K  P+    T  +  +  Q SLSL     S+ + +  +   I
Sbjct: 73  P----------------PKSFPNPDFLTPQIRPISQQDSLSLWQNLRSNMNIEDFRGIEI 132

Query: 141 -----PTLMDLWPVPASSTSTTSSCDSAISFITKLNDHDHHDHDHHYFDSDIEVDTSLHL 196
                PTLM+LWPV  + +S+ +S  S+ S I K  D           DSD +VDTSLHL
Sbjct: 133 SCCVPPTLMNLWPVNDTPSSSNASSSSS-SNIYKFEDS----------DSDSDVDTSLHL 155

The following BLAST results are available for this feature:
BLAST of Cucsa.044680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KJS5_CUCSA1.9e-108100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G511110 PE=4 SV=1[more]
W9SFE8_9ROSA3.9e-1335.75Uncharacterized protein OS=Morus notabilis GN=L484_000264 PE=4 SV=1[more]
W9QDY3_9ROSA1.5e-1235.20Uncharacterized protein OS=Morus notabilis GN=L484_010582 PE=4 SV=1[more]
A0A059CF52_EUCGR8.1e-1136.32Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01438 PE=4 SV=1[more]
M5WKJ7_PRUPE8.4e-0830.53Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023210mg PE=4 SV=1[more]
BLAST of Cucsa.044680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700193840|gb|KGN49044.1|2.7e-108100.00hypothetical protein Csa_6G511110 [Cucumis sativus][more]
gi|703163013|ref|XP_010113201.1|5.6e-1335.75hypothetical protein L484_000264 [Morus notabilis][more]
gi|703066129|ref|XP_010087631.1|2.1e-1235.20hypothetical protein L484_010582 [Morus notabilis][more]
gi|629112138|gb|KCW77098.1|1.2e-1036.32hypothetical protein EUGRSUZ_D01438 [Eucalyptus grandis][more]
gi|1009107295|ref|XP_015878993.1|9.9e-1035.00PREDICTED: uncharacterized protein LOC107415217 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.044680.1Cucsa.044680.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 23..43
scor
NoneNo IPR availablePANTHERPTHR34570FAMILY NOT NAMEDcoord: 8..81
score: 7.4E-19coord: 189..195
score: 7.4E-19coord: 98..172
score: 7.4
NoneNo IPR availablePANTHERPTHR34570:SF2SUBFAMILY NOT NAMEDcoord: 98..172
score: 7.4E-19coord: 8..81
score: 7.4E-19coord: 189..195
score: 7.4