MELO3C006556.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C006556.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionOuter envelope membrane protein 7
Locationchr06 : 4144203 .. 4144844 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTACGCTGAAGTTGAACGCGGCGAGAACGAAAATAACCGATGAAGGAAACAGCGAAGTTGAACGCGGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGGTCGGGTTCAAACCCTACCTCGAGAAAGCTCAAACTTATCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCTAAAAGACGCCGTTTCAAACCCCGACGGTTAAGCTCAATCTTCGTTGTTTTGGTATGTATAAATTTAGCTCATTGGGGATGACGCTTTAGAGATTACCTTGAAATTTCTCAGTTTCCAGAGATGTTGGGAAACTGAAGAAGGATCAATTGCTATTGATTGAAGATACAGATAGATTAGGGAATCCTTCGATTCTCGTGGTATGTGCTCACTGTCGTTTGAATTCTGAAAATTTCCATTCTCAGATTCGTTACGAACATTGATCAAGTAGACCATTTTCTGACTTACAATAATGTAGTTTGAAAGTTTGCTCTTTCTTTATCGTAGTTTGATGTTGTTTAGTTATAGTTTCAGTGATATTGCATACAAAAACTTTGCATATCATAAACCGCGTCTTTGTTGATCTTGGCCATAATTTGAAGTGGAAATTGTTCTTGGGGCTGTGT

mRNA sequence

AAGTACGCTGAAGTTGAACGCGGCGAGAACGAAAATAACCGATGAAGGAAACAGCGAAGTTGAACGCGGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGGTCGGGTTCAAACCCTACCTCGAGAAAGCTCAAACTTATCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCTAAAAGACGCCGTTTCAAACCCCGACGGTTAAGCTCAATCTTCGTTGTTTTGGTATGTATAAATTTAGCTCATTGGGGATGACGCTTTAGAGATTACCTTGAAATTTCTCAGTTTCCAGAGATGTTGGGAAACTGAAGAAGGATCAATTGCTATTGATTGAAGATACAGATAGATTAGGGAATCCTTCGATTCTCGTGGTATGTGCTCACTGTCGTTTGAATTCTGAAAATTTCCATTCTCAGATTCGTTACGAACATTGATCAAGTAGACCATTTTCTGACTTACAATAATGTAGTTTGAAAGTTTGCTCTTTCTTTATCGTAGTTTGATGTTGTTTAGTTATAGTTTCAGTGATATTGCATACAAAAACTTTGCATATCATAAACCGCGTCTTTGTTGATCTTGGCCATAATTTGAAGTGGAAATTGTTCTTGGGGCTGTGT

Coding sequence (CDS)

ATGAAGGAAACAGCGAAGTTGAACGCGGCGAGGTCTGGCTTGGTGGTGATCGGAGCTTTGGCCTTCGGATACCTGAGCTTACAGGTCGGGTTCAAACCCTACCTCGAGAAAGCTCAAACTTATCTTCAACATCCCGAGCCTGAGCCCTCTACAATTCTAAAAGACGCCGTTTCAAACCCCGACGGTTAA

Protein sequence

MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPSTILKDAVSNPDG
Homology
[Close]
BLAST of MELO3C006556.2 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_3G149930 [Cucumis sativus])

HSP 1 Score: 105.9 bits (263), Expect = 5.0e-20
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPSTILKDAVSNP 60
          MKETAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQ+ LQHPEPEPSTI KDA+SN 
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 61 D 62
          D
Sbjct: 61 D 61

[Close]
BLAST of MELO3C006556.2 vs. NCBI nr
Match: PKI77164.1 (hypothetical protein CRG98_002446 [Punica granatum])

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-08
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPSTILKDAVSNP 60
          M +TAK+NA RSG+VV+GALAFGYLS ++GFKPYLE+A+  L+   P   ++ +   S P
Sbjct: 1  MNQTAKMNAIRSGIVVVGALAFGYLSFRLGFKPYLERAEAALESAGPSQPSLSQSEHSPP 60

[Close]
BLAST of MELO3C006556.2 vs. NCBI nr
Match: EXB55018.1 (hypothetical protein L484_007349 [Morus notabilis])

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-08
Identity = 29/51 (56.86%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPST 52
          M++  K+NA RSG+VV+GA+AFGYL+L +GFKP+LEKAQ  ++H + +PS+
Sbjct: 1  MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSS 51

[Close]
BLAST of MELO3C006556.2 vs. NCBI nr
Match: PON80154.1 (hypothetical protein PanWU01x14_006040 [Parasponia andersonii])

HSP 1 Score: 66.6 bits (161), Expect = 3.3e-08
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPST 52
          M    K+NA RSG+VV+GALAFGYL+LQ+GFKP+LEKAQ  L H E   S+
Sbjct: 1  MDHRTKMNAMRSGVVVVGALAFGYLTLQLGFKPFLEKAQVNLDHSEKPTSS 51

[Close]
BLAST of MELO3C006556.2 vs. NCBI nr
Match: KVI01646.1 (hypothetical protein Ccrd_020077 [Cynara cardunculus var. scolymus])

HSP 1 Score: 66.2 bits (160), Expect = 4.4e-08
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTY 42
          MKE AK N  RSGLVVIGALAFGYL+LQ+GFKPYLEKAQ Y
Sbjct: 1  MKEAAK-NGLRSGLVVIGALAFGYLTLQLGFKPYLEKAQLY 40

[Close]
BLAST of MELO3C006556.2 vs. TAIR10
Match: AT5G19151.1 (unknown protein)

HSP 1 Score: 57.4 bits (137), Expect = 3.7e-09
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTY 42
          MK T   NA RS +VV+G+LAFGYLSL++G+KP+LEKA+ Y
Sbjct: 1  MKRTVMDNAIRSSVVVLGSLAFGYLSLELGYKPFLEKAEQY 41

[Close]
BLAST of MELO3C006556.2 vs. TrEMBL
Match: tr|A0A0A0L5N1|A0A0A0L5N1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-20
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPSTILKDAVSNP 60
          MKETAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQ+ LQHPEPEPSTI KDA+SN 
Sbjct: 1  MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 61 D 62
          D
Sbjct: 61 D 61

[Close]
BLAST of MELO3C006556.2 vs. TrEMBL
Match: tr|A0A2I0L8Y5|A0A2I0L8Y5_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002446 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.6e-09
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPSTILKDAVSNP 60
          M +TAK+NA RSG+VV+GALAFGYLS ++GFKPYLE+A+  L+   P   ++ +   S P
Sbjct: 1  MNQTAKMNAIRSGIVVVGALAFGYLSFRLGFKPYLERAEAALESAGPSQPSLSQSEHSPP 60

[Close]
BLAST of MELO3C006556.2 vs. TrEMBL
Match: tr|W9R337|W9R337_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-08
Identity = 29/51 (56.86%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPST 52
          M++  K+NA RSG+VV+GA+AFGYL+L +GFKP+LEKAQ  ++H + +PS+
Sbjct: 1  MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSS 51

[Close]
BLAST of MELO3C006556.2 vs. TrEMBL
Match: tr|A0A2P5E3N7|A0A2P5E3N7_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_006040 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-08
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTYLQHPEPEPST 52
          M    K+NA RSG+VV+GALAFGYL+LQ+GFKP+LEKAQ  L H E   S+
Sbjct: 1  MDHRTKMNAMRSGVVVVGALAFGYLTLQLGFKPFLEKAQVNLDHSEKPTSS 51

[Close]
BLAST of MELO3C006556.2 vs. TrEMBL
Match: tr|A0A103Y354|A0A103Y354_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_020077 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-08
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 0 

Query: 1  MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQTY 42
          MKE AK N  RSGLVVIGALAFGYL+LQ+GFKPYLEKAQ Y
Sbjct: 1  MKEAAK-NGLRSGLVVIGALAFGYLTLQLGFKPYLEKAQLY 40

The following BLAST results are available for this feature:
BLAST of MELO3C006556.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57013.15.0e-2088.52hypothetical protein Csa_3G149930 [Cucumis sativus][more]
PKI77164.11.1e-0853.33hypothetical protein CRG98_002446 [Punica granatum][more]
EXB55018.12.0e-0856.86hypothetical protein L484_007349 [Morus notabilis][more]
PON80154.13.3e-0862.75hypothetical protein PanWU01x14_006040 [Parasponia andersonii][more]
KVI01646.14.4e-0882.93hypothetical protein Ccrd_020077 [Cynara cardunculus var. scolymus][more]
BLAST of MELO3C006556.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G19151.13.7e-0963.41unknown protein[more]
BLAST of MELO3C006556.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C006556.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L5N1|A0A0A0L5N1_CUCSA3.3e-2088.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1[more]
tr|A0A2I0L8Y5|A0A2I0L8Y5_PUNGR7.6e-0953.33Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_002446 PE=4 SV=1[more]
tr|W9R337|W9R337_9ROSA1.3e-0856.86Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1[more]
tr|A0A2P5E3N7|A0A2P5E3N7_PARAD2.2e-0862.75Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_006040 PE... [more]
tr|A0A103Y354|A0A103Y354_CYNCS2.9e-0882.93Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_020... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038944OEP7-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0009707 chloroplast outer membrane
cellular_component GO:0031359 integral component of chloroplast outer membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009536 plastid
cellular_component GO:0009527 plastid outer membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006556.2.1MELO3C006556.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038944Outer envelope membrane protein 7-likePANTHERPTHR33982FAMILY NOT NAMEDcoord: 1..47
NoneNo IPR availablePANTHERPTHR33982:SF2SUBFAMILY NOT NAMEDcoord: 1..47

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006556.2Csa3G149930Cucumber (Chinese Long) v2cumedB223
MELO3C006556.2CSPI03G13410Wild cucumber (PI 183967)cpimedB224
MELO3C006556.2CmaCh14G016820Cucurbita maxima (Rimu)cmamedB273
MELO3C006556.2CmoCh14G017280Cucurbita moschata (Rifu)cmomedB260
MELO3C006556.2Lsi05G014480Bottle gourd (USVL1VR-Ls)lsimedB385
MELO3C006556.2Cla021655Watermelon (97103) v1medwmB447
MELO3C006556.2Cla97C05G086690Watermelon (97103) v2medwmbB423
MELO3C006556.2Bhi01G000622Wax gourdmedwgoB530
MELO3C006556.2Carg23816Silver-seed gourdcarmedB0235
MELO3C006556.2CsaV3_3G013620Cucumber (Chinese Long) v3cucmedB230
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006556.2Watermelon (97103) v2medwmbB442
MELO3C006556.2Watermelon (97103) v2medwmbB447
MELO3C006556.2Wax gourdmedwgoB522
MELO3C006556.2Cucumber (Gy14) v2cgybmedB201
MELO3C006556.2Cucumber (Gy14) v1cgymedB432
MELO3C006556.2Cucurbita maxima (Rimu)cmamedB398
MELO3C006556.2Cucurbita maxima (Rimu)cmamedB399
MELO3C006556.2Cucurbita maxima (Rimu)cmamedB863
MELO3C006556.2Cucurbita maxima (Rimu)cmamedB950
MELO3C006556.2Cucurbita moschata (Rifu)cmomedB385
MELO3C006556.2Cucurbita moschata (Rifu)cmomedB387
MELO3C006556.2Cucurbita moschata (Rifu)cmomedB857
MELO3C006556.2Cucurbita moschata (Rifu)cmomedB940
MELO3C006556.2Cucurbita pepo (Zucchini)cpemedB170
MELO3C006556.2Cucurbita pepo (Zucchini)cpemedB171
MELO3C006556.2Cucurbita pepo (Zucchini)cpemedB371
MELO3C006556.2Cucurbita pepo (Zucchini)cpemedB693
MELO3C006556.2Cucurbita pepo (Zucchini)cpemedB951
MELO3C006556.2Melon (DHL92) v3.6.1medmedB049
MELO3C006556.2Melon (DHL92) v3.6.1medmedB092
MELO3C006556.2Bottle gourd (USVL1VR-Ls)lsimedB032
MELO3C006556.2Bottle gourd (USVL1VR-Ls)lsimedB232
MELO3C006556.2Watermelon (Charleston Gray)medwcgB400
MELO3C006556.2Watermelon (Charleston Gray)medwcgB416
MELO3C006556.2Watermelon (Charleston Gray)medwcgB437
MELO3C006556.2Watermelon (97103) v1medwmB432
MELO3C006556.2Watermelon (97103) v1medwmB474
MELO3C006556.2Silver-seed gourdcarmedB0074
MELO3C006556.2Silver-seed gourdcarmedB0340
MELO3C006556.2Silver-seed gourdcarmedB0616