MELO3C006333 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006333
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEthylene-responsive transcription factor
Locationchr6 : 2618615 .. 2619109 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCGAAAGATCCGTGTAATCTGCAACGATCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCATTTCCCCCTTTTACCTTCTTCTAACTCTACATCTAATTCTTCAATCCATGATGAAGAAACCTCTCACACCTCTTCTCACCATACCAACAATGGTGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATACAGAGGCGTGAGGCAGAGAAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGTGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCCAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCCGCTCCTAAATCTCCGACGCGGTTCAAAGGTTCTCATGTACTGGGTTATTGA

mRNA sequence

ATGAGTCGAAAGATCCGTGTAATCTGCAACGATCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCATTTCCCCCTTTTACCTTCTTCTAACTCTACATCTAATTCTTCAATCCATGATGAAGAAACCTCTCACACCTCTTCTCACCATACCAACAATGGTGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATACAGAGGCGTGAGGCAGAGAAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGTGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCCAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCCGCTCCTAAATCTCCGACGCGGTTCAAAGGTTCTCATGTACTGGGTTATTGA

Coding sequence (CDS)

ATGAGTCGAAAGATCCGTGTAATCTGCAACGATCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCATTTCCCCCTTTTACCTTCTTCTAACTCTACATCTAATTCTTCAATCCATGATGAAGAAACCTCTCACACCTCTTCTCACCATACCAACAATGGTGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATACAGAGGCGTGAGGCAGAGAAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGTGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCCAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCCGCTCCTAAATCTCCGACGCGGTTCAAAGGTTCTCATGTACTGGGTTATTGA

Protein sequence

MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY*
Homology
[Close]
BLAST of MELO3C006333 vs. Swiss-Prot
Match: EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF118 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-25
Identity = 66/146 (45.21%), Postives = 83/146 (56.85%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSS-ENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETS 62
           RK+R+I NDP  TD SSS E E       K KRIVREI+FP +  S   S SS  D    
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDS--- 96

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
                 T   GK         +  + +P     +  GVRQRKWG+WAAEIRDP K+ R W
Sbjct: 97  ------TKTDGK---------IAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMA 148
           LGT++T EEA++AY++K+LEF + +A
Sbjct: 157 LGTFDTLEEAAKAYDAKKLEFDAIVA 164

[Close]
BLAST of MELO3C006333 vs. Swiss-Prot
Match: EF119_ARATH (Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana GN=ERF119 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-22
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETSH 62
           RK+R + NDP  TD SSSE   +E  S + KR V EI  P   ++    + S + +E+++
Sbjct: 41  RKLRFVVNDPYATDYSSSE---EEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNN 100

Query: 63  TSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWL 122
                T      +++   +          T S+  GVRQRKWG+WAAEIR P  + R WL
Sbjct: 101 NGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWL 160

Query: 123 GTYNTAEEASRAYESKRLEFQSAMAA 149
           GTY T E+A+ AY +K+LEF +  AA
Sbjct: 161 GTYETLEQAADAYATKKLEFDALAAA 183

[Close]
BLAST of MELO3C006333 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.6e-19
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 

Query: 2   SRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETS 61
           +R +R+   DPD TDSSS + E +       +R V++    +   S +    S    E+ 
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 62  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 121
                   +      + +    T T T E+   ++RGVRQR WG+WAAEIRDP KR R+W
Sbjct: 94  KRQKRAVKSESTVSPVVSA---TTTTTGEK---KFRGVRQRPWGKWAAEIRDPLKRVRLW 153

Query: 122 LGTYNTAEEASRAYESKRLEFQSAMAAAPKSPT 155
           LGTYNTAEEA+  Y++  ++ +   A    S T
Sbjct: 154 LGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

[Close]
BLAST of MELO3C006333 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.4e-19
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKS-KRIVREIHFPLLPSSNST-SNSSIHDEET 62
           +K+ +   DPD TDSSS E+E D     +  KR V EI   + PS N+  +  S+ D + 
Sbjct: 37  KKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEI--TVEPSCNNVVTGVSMKDRKR 96

Query: 63  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 122
             +SS  T +    +Q  N +V     +      ++RGVRQR WG+WAAEIRDP +R R+
Sbjct: 97  LSSSSDETQSPASSRQRPNNKV-----SVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRI 156

Query: 123 WLGTYNTAEEASRAYESKRLEFQ 144
           WLGT+ TAEEA+  Y++  +  +
Sbjct: 157 WLGTFETAEEAAVVYDNAAIRLR 172

[Close]
BLAST of MELO3C006333 vs. Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.2e-17
Identity = 58/156 (37.18%), Postives = 78/156 (50.00%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNS-SKSKRIVREIHFPLLPSSNSTS-NSSIHDEET 62
           R +R+   DP  TDSSS +++ +      + KR V+EI F    SS+ST+     H EE 
Sbjct: 29  RLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIRFCQGESSSSTAARKGKHKEEE 88

Query: 63  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 122
           S       +   KP+                   +YRGVRQR WG++AAEIRDP  R R+
Sbjct: 89  SVVVEDDVSTSVKPK-------------------KYRGVRQRPWGKFAAEIRDPSSRTRI 148

Query: 123 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRF 157
           WLGT+ TAEEA+ AY+   +  +      PK+ T F
Sbjct: 149 WLGTFVTAEEAAIAYDRAAIHLK-----GPKALTNF 160

[Close]
BLAST of MELO3C006333 vs. TrEMBL
Match: A0A0A0L811_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133130 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-85
Identity = 158/164 (96.34%), Postives = 162/164 (98.78%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPL  SSNS+S+SSIHDEET
Sbjct: 50  MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 109

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 110 SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPK+PTRFKGSH+LGY
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]
BLAST of MELO3C006333 vs. TrEMBL
Match: A0A0A0K880_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039270 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 5.9e-47
Identity = 102/153 (66.67%), Postives = 120/153 (78.43%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERD-ESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEE 60
           MSRKIRVICNDPD TDSSSSE+E + ++   K KRIVREIH P  P   S    S+    
Sbjct: 28  MSRKIRVICNDPDATDSSSSEDEGEIQTKPLKLKRIVREIHLPPFPFHPS---KSMDVTT 87

Query: 61  TSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
           ++ +SS  +NNGGK Q+L   RVL KTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK AR
Sbjct: 88  STPSSSQDSNNGGKNQELKKKRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 147

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMAAAPKS 153
           +WLGTYNTAEEAS+AYESKRLEF+SA+AAAPKS
Sbjct: 148 IWLGTYNTAEEASQAYESKRLEFESALAAAPKS 177

[Close]
BLAST of MELO3C006333 vs. TrEMBL
Match: F6HEX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03470 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.1e-32
Identity = 83/151 (54.97%), Postives = 104/151 (68.87%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSK-SKRIVREIHFPLLPSSNSTSNSSIHDEETS 62
           RKIRVIC DP+ TDSSSSE+E   S   K  KRIVREI+   LP + S  +++I  E   
Sbjct: 28  RKIRVICYDPEATDSSSSEDEGGISKREKRGKRIVREIN---LPVAGSPQSNAIETE--- 87

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
            +S   +NNGGK  +   +R        +  +S+YRGVRQRKWG+WAAEIRDPF+  RVW
Sbjct: 88  -SSCQDSNNGGKNPKKRFLR--------KPPSSKYRGVRQRKWGKWAAEIRDPFRGVRVW 147

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMAAAPKS 153
           LGTYNT EEA++AYESKRLEF++  A+A KS
Sbjct: 148 LGTYNTPEEAAKAYESKRLEFEAMAASANKS 163

[Close]
BLAST of MELO3C006333 vs. TrEMBL
Match: A0A0A0KWF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609620 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 7.0e-32
Identity = 83/160 (51.88%), Postives = 105/160 (65.62%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60
           M RK+R+IC DPD TDSSSSE+E  E+ + K  RIV EIH P L  S  +          
Sbjct: 29  MRRKLRIICYDPDATDSSSSEDE-GETYARKFNRIVHEIHLPPLKKSLESE--------- 88

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPER-TTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
              SS ++NN  K  +    + L K  +  R ++S+YRGVRQR WG+WAAEIRDPFKR+R
Sbjct: 89  ---SSQNSNNENKNLKFKQSKALFKNPSSRRPSSSKYRGVRQRSWGKWAAEIRDPFKRSR 148

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGS 160
           VWLGTY+TAEEAS+AYES+RL+F++ MAA        KGS
Sbjct: 149 VWLGTYDTAEEASQAYESRRLQFET-MAAEMAVEEEGKGS 174

[Close]
BLAST of MELO3C006333 vs. TrEMBL
Match: A0A067G2M2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043614mg PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.6e-31
Identity = 80/155 (51.61%), Postives = 111/155 (71.61%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60
           M+RK+RVICNDP  TDSSSSE+E + +++ +  R VREI+ PL P        ++ + E+
Sbjct: 10  MTRKVRVICNDPYATDSSSSEDESERNDTRR--RFVREINIPLGPLLTPPQLRTV-EAES 69

Query: 61  SHTSSHHTNNGGKPQQLTNIR---VLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKR 120
           S  SS++ NN  K Q  ++ R   +L+ T TP  ++++ +GVRQRKWG+WAAEIRDPFK+
Sbjct: 70  SFDSSNNNNNEVKSQNPSSKRKKTILSVTKTP--SSNKPKGVRQRKWGKWAAEIRDPFKK 129

Query: 121 ARVWLGTYNTAEEASRAYESKRLEFQSAMAAAPKS 153
            R+WLGTY+T E A+RAYE KRLEF+ A AA+ KS
Sbjct: 130 GRIWLGTYDTKEAAARAYEIKRLEFE-ARAASEKS 158

[Close]
BLAST of MELO3C006333 vs. TAIR10
Match: AT1G68550.1 (AT1G68550.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 66/146 (45.21%), Postives = 83/146 (56.85%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSS-ENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETS 62
           RK+R+I NDP  TD SSS E E       K KRIVREI+FP +  S   S SS  D    
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDS--- 96

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
                 T   GK         +  + +P     +  GVRQRKWG+WAAEIRDP K+ R W
Sbjct: 97  ------TKTDGK---------IAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMA 148
           LGT++T EEA++AY++K+LEF + +A
Sbjct: 157 LGTFDTLEEAAKAYDAKKLEFDAIVA 164

[Close]
BLAST of MELO3C006333 vs. TAIR10
Match: AT3G25890.1 (AT3G25890.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 57/146 (39.04%), Postives = 79/146 (54.11%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETSH 62
           RK+R + NDP  TD SSSE   +E  S + KR V EI  P   ++    + S + +E+++
Sbjct: 41  RKLRFVVNDPYATDYSSSE---EEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNN 100

Query: 63  TSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWL 122
                T      +++   +          T S+  GVRQRKWG+WAAEIR P  + R WL
Sbjct: 101 NGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWL 160

Query: 123 GTYNTAEEASRAYESKRLEFQSAMAA 149
           GTY T E+A+ AY +K+LEF +  AA
Sbjct: 161 GTYETLEQAADAYATKKLEFDALAAA 183

[Close]
BLAST of MELO3C006333 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 96.7 bits (239), Expect = 1.5e-20
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1 

Query: 2   SRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEETS 61
           +R +R+   DPD TDSSS + E +       +R V++    +   S +    S    E+ 
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 62  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 121
                   +      + +    T T T E+   ++RGVRQR WG+WAAEIRDP KR R+W
Sbjct: 94  KRQKRAVKSESTVSPVVSA---TTTTTGEK---KFRGVRQRPWGKWAAEIRDPLKRVRLW 153

Query: 122 LGTYNTAEEASRAYESKRLEFQSAMAAAPKSPT 155
           LGTYNTAEEA+  Y++  ++ +   A    S T
Sbjct: 154 LGTYNTAEEAAMVYDNAAIQLRGPDALTNFSVT 180

[Close]
BLAST of MELO3C006333 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-20
Identity = 56/143 (39.16%), Postives = 80/143 (55.94%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKS-KRIVREIHFPLLPSSNST-SNSSIHDEET 62
           +K+ +   DPD TDSSS E+E D     +  KR V EI   + PS N+  +  S+ D + 
Sbjct: 37  KKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEI--TVEPSCNNVVTGVSMKDRKR 96

Query: 63  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 122
             +SS  T +    +Q  N +V     +      ++RGVRQR WG+WAAEIRDP +R R+
Sbjct: 97  LSSSSDETQSPASSRQRPNNKV-----SVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRI 156

Query: 123 WLGTYNTAEEASRAYESKRLEFQ 144
           WLGT+ TAEEA+  Y++  +  +
Sbjct: 157 WLGTFETAEEAAVVYDNAAIRLR 172

[Close]
BLAST of MELO3C006333 vs. TAIR10
Match: AT3G61630.1 (AT3G61630.1 cytokinin response factor 6)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 58/156 (37.18%), Postives = 78/156 (50.00%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNS-SKSKRIVREIHFPLLPSSNSTS-NSSIHDEET 62
           R +R+   DP  TDSSS +++ +      + KR V+EI F    SS+ST+     H EE 
Sbjct: 29  RLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIRFCQGESSSSTAARKGKHKEEE 88

Query: 63  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 122
           S       +   KP+                   +YRGVRQR WG++AAEIRDP  R R+
Sbjct: 89  SVVVEDDVSTSVKPK-------------------KYRGVRQRPWGKFAAEIRDPSSRTRI 148

Query: 123 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRF 157
           WLGT+ TAEEA+ AY+   +  +      PK+ T F
Sbjct: 149 WLGTFVTAEEAAIAYDRAAIHLK-----GPKALTNF 160

[Close]
BLAST of MELO3C006333 vs. NCBI nr
Match: gi|659077741|ref|XP_008439360.1| (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]
BLAST of MELO3C006333 vs. NCBI nr
Match: gi|449433193|ref|XP_004134382.1| (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 158/164 (96.34%), Postives = 162/164 (98.78%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPL  SSNS+S+SSIHDEET
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPK+PTRFKGSH+LGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 164

[Close]
BLAST of MELO3C006333 vs. NCBI nr
Match: gi|700201629|gb|KGN56762.1| (hypothetical protein Csa_3G133130 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 158/164 (96.34%), Postives = 162/164 (98.78%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPL  SSNS+S+SSIHDEET
Sbjct: 50  MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 109

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 110 SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPK+PTRFKGSH+LGY
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]
BLAST of MELO3C006333 vs. NCBI nr
Match: gi|659089721|ref|XP_008445662.1| (PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 2.9e-47
Identity = 104/154 (67.53%), Postives = 124/154 (80.52%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERD-ESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEE 60
           M+RKIRVICNDPD TDSSSSE+E + ++ S K KRIVREIH PL PS +S    S+    
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEVQTKSLKLKRIVREIHLPLFPSHSS---KSMDVTT 87

Query: 61  TSHTSSHHTNNGGKPQQLTNIRVL-TKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRA 120
           ++ +SS  +NNGGK  +L   RVL TKTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK A
Sbjct: 88  STPSSSQDSNNGGKNLELKKKRVLGTKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGA 147

Query: 121 RVWLGTYNTAEEASRAYESKRLEFQSAMAAAPKS 153
           R+WLGTYNTAEEAS+AYESKRLEF++AMAAAPKS
Sbjct: 148 RIWLGTYNTAEEASQAYESKRLEFETAMAAAPKS 178

[Close]
BLAST of MELO3C006333 vs. NCBI nr
Match: gi|449446199|ref|XP_004140859.1| (PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis sativus])

HSP 1 Score: 195.3 bits (495), Expect = 8.5e-47
Identity = 102/153 (66.67%), Postives = 120/153 (78.43%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERD-ESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEE 60
           MSRKIRVICNDPD TDSSSSE+E + ++   K KRIVREIH P  P   S    S+    
Sbjct: 28  MSRKIRVICNDPDATDSSSSEDEGEIQTKPLKLKRIVREIHLPPFPFHPS---KSMDVTT 87

Query: 61  TSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
           ++ +SS  +NNGGK Q+L   RVL KTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK AR
Sbjct: 88  STPSSSQDSNNGGKNQELKKKRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 147

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMAAAPKS 153
           +WLGTYNTAEEAS+AYESKRLEF+SA+AAAPKS
Sbjct: 148 IWLGTYNTAEEASQAYESKRLEFESALAAAPKS 177

The following BLAST results are available for this feature:
BLAST of MELO3C006333 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF118_ARATH2.4e-2545.21Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF11... [more]
EF119_ARATH2.5e-2239.04Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana GN=ERF11... [more]
CRF2_ARATH2.6e-1935.29Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF3_ARATH4.4e-1939.16Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
CRF6_ARATH3.2e-1737.18Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE... [more]
BLAST of MELO3C006333 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L811_CUCSA1.1e-8596.34Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133130 PE=4 SV=1[more]
A0A0A0K880_CUCSA5.9e-4766.67Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039270 PE=4 SV=1[more]
F6HEX1_VITVI4.1e-3254.97Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03470 PE=4 SV=... [more]
A0A0A0KWF1_CUCSA7.0e-3251.88Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609620 PE=4 SV=1[more]
A0A067G2M2_CITSI4.6e-3151.61Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043614mg PE=4 SV=1[more]
BLAST of MELO3C006333 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68550.11.4e-2645.21 Integrase-type DNA-binding superfamily protein[more]
AT3G25890.11.4e-2339.04 Integrase-type DNA-binding superfamily protein[more]
AT4G23750.11.5e-2035.29 cytokinin response factor 2[more]
AT5G53290.12.5e-2039.16 cytokinin response factor 3[more]
AT3G61630.11.8e-1837.18 cytokinin response factor 6[more]
BLAST of MELO3C006333 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077741|ref|XP_008439360.1|1.2e-88100.00PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo][more]
gi|449433193|ref|XP_004134382.1|1.6e-8596.34PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus... [more]
gi|700201629|gb|KGN56762.1|1.6e-8596.34hypothetical protein Csa_3G133130 [Cucumis sativus][more]
gi|659089721|ref|XP_008445662.1|2.9e-4767.53PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo][more]
gi|449446199|ref|XP_004140859.1|8.5e-4766.67PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006333T1MELO3C006333T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 118..134
score: 7.9E-11coord: 96..107
score: 7.9
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 95..147
score: 1.3
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 94..142
score: 5.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 95..149
score: 3.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 95..157
score: 2
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 94..146
score: 1.18
IPR017392AP2/ERF transcription factor ERF/PTI6PIRPIRSF038123PTI6coord: 1..156
score: 1.5
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 1..148
score: 3.0
NoneNo IPR availablePANTHERPTHR31190:SF17SUBFAMILY NOT NAMEDcoord: 1..148
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006333Csa3G133130Cucumber (Chinese Long) v2cumeB236
MELO3C006333Cla021440Watermelon (97103) v1mewmB461
MELO3C006333Cla97C05G084190Watermelon (97103) v2mewmbB434
MELO3C006333Bhi01G000042Wax gourdmewgoB536
MELO3C006333CSPI03G11120Wild cucumber (PI 183967)cpimeB230
MELO3C006333Cucsa.256230Cucumber (Gy14) v1cgymeB439
MELO3C006333CmaCh14G018770Cucurbita maxima (Rimu)cmameB242
MELO3C006333CmaCh06G012630Cucurbita maxima (Rimu)cmameB763
MELO3C006333CmoCh06G012720Cucurbita moschata (Rifu)cmomeB755
MELO3C006333CmoCh14G019250Cucurbita moschata (Rifu)cmomeB230
MELO3C006333Lsi05G018170Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006333CsGy3G011180Cucumber (Gy14) v2cgybmeB200
MELO3C006333Carg16508Silver-seed gourdcarmeB0240
MELO3C006333CsaV3_3G011230Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006333Cucurbita pepo (Zucchini)cpemeB585
MELO3C006333Cucurbita pepo (Zucchini)cpemeB702
MELO3C006333Cucurbita pepo (Zucchini)cpemeB813
MELO3C006333Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006333Bottle gourd (USVL1VR-Ls)lsimeB382
MELO3C006333Cucumber (Gy14) v2cgybmeB127
MELO3C006333Cucumber (Gy14) v2cgybmeB216
MELO3C006333Silver-seed gourdcarmeB0236
MELO3C006333Silver-seed gourdcarmeB0780
MELO3C006333Silver-seed gourdcarmeB0941
MELO3C006333Silver-seed gourdcarmeB1050
MELO3C006333Cucumber (Chinese Long) v3cucmeB149
MELO3C006333Cucumber (Chinese Long) v3cucmeB253
MELO3C006333Watermelon (97103) v2mewmbB448
MELO3C006333Watermelon (97103) v2mewmbB451
MELO3C006333Wax gourdmewgoB514
MELO3C006333Wax gourdmewgoB552
MELO3C006333Melon (DHL92) v3.5.1memeB147
MELO3C006333Cucumber (Gy14) v1cgymeB235
MELO3C006333Cucurbita maxima (Rimu)cmameB343
MELO3C006333Cucurbita maxima (Rimu)cmameB580
MELO3C006333Cucurbita maxima (Rimu)cmameB850
MELO3C006333Cucurbita moschata (Rifu)cmomeB336
MELO3C006333Cucurbita moschata (Rifu)cmomeB568
MELO3C006333Cucurbita moschata (Rifu)cmomeB832
MELO3C006333Wild cucumber (PI 183967)cpimeB145
MELO3C006333Wild cucumber (PI 183967)cpimeB147
MELO3C006333Wild cucumber (PI 183967)cpimeB248
MELO3C006333Cucumber (Chinese Long) v2cumeB148
MELO3C006333Cucumber (Chinese Long) v2cumeB253
MELO3C006333Watermelon (Charleston Gray)mewcgB427
MELO3C006333Watermelon (Charleston Gray)mewcgB441
MELO3C006333Watermelon (Charleston Gray)mewcgB445
MELO3C006333Watermelon (97103) v1mewmB486
MELO3C006333Watermelon (97103) v1mewmB460
MELO3C006333Cucurbita pepo (Zucchini)cpemeB141
MELO3C006333Cucurbita pepo (Zucchini)cpemeB316