Cucsa.256230 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.256230
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionEthylene-responsive transcription factor
Locationscaffold02229 : 3897556 .. 3898115 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGTTTCGTGAAAAATATCCGAATCCCTTCGAAGAACACGAAAATGAGTCGAAAAATCCGCGTAATCTGCAACGACCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCCTTTTCGCTTCTTCTAACTCTTCATCTGATTCTTCAATTCATGATGAGGAAACCTCTCACACCTCTTCTCACCACACCAACAATGGCGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATATAGAGGCGTGAGGCAGAGGAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGAGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCTGCTCCTAAAGCTCCGACGAGGTTCAAAGGTTCTCATCTACTGGGTTATTGAACGTAGAATCTTTGTCCTG

mRNA sequence

AAAAAGTTTCGTGAAAAATATCCGAATCCCTTCGAAGAACACGAAAATGAGTCGAAAAATCCGCGTAATCTGCAACGACCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCCTTTTCGCTTCTTCTAACTCTTCATCTGATTCTTCAATTCATGATGAGGAAACCTCTCACACCTCTTCTCACCACACCAACAATGGCGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATATAGAGGCGTGAGGCAGAGGAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGAGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCTGCTCCTAAAGCTCCGACGAGGTTCAAAGGTTCTCATCTACTGGGTTATTGAACGTAGAATCTTTGTCCTG

Coding sequence (CDS)

ATGAGTCGAAAAATCCGCGTAATCTGCAACGACCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCCTTTTCGCTTCTTCTAACTCTTCATCTGATTCTTCAATTCATGATGAGGAAACCTCTCACACCTCTTCTCACCACACCAACAATGGCGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATATAGAGGCGTGAGGCAGAGGAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGAGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCTGCTCCTAAAGCTCCGACGAGGTTCAAAGGTTCTCATCTACTGGGTTATTGA

Protein sequence

MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY*
Homology
[Close]
BLAST of Cucsa.256230 vs. Swiss-Prot
Match: EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF118 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-25
Identity = 66/146 (45.21%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSS-ENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETS 62
           RK+R+I NDP  TD SSS E E       K KRIVREI+FP    S   S+SS  D    
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDS--- 96

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
                 T   GK         +  + +P     +  GVRQRKWG+WAAEIRDP K+ R W
Sbjct: 97  ------TKTDGK---------IAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMA 148
           LGT++T EEA++AY++K+LEF + +A
Sbjct: 157 LGTFDTLEEAAKAYDAKKLEFDAIVA 164

[Close]
BLAST of Cucsa.256230 vs. Swiss-Prot
Match: EF119_ARATH (Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana GN=ERF119 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-22
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETSH 62
           RK+R + NDP  TD SSSE   +E  S + KR V EI  P   ++  +   S + +E+++
Sbjct: 41  RKLRFVVNDPYATDYSSSE---EEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNN 100

Query: 63  TSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWL 122
                T      +++   +          T S+  GVRQRKWG+WAAEIR P  + R WL
Sbjct: 101 NGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWL 160

Query: 123 GTYNTAEEASRAYESKRLEFQSAMAAAPKA 153
           GTY T E+A+ AY +K+LEF  A+AAA  A
Sbjct: 161 GTYETLEQAADAYATKKLEF-DALAAATSA 186

[Close]
BLAST of Cucsa.256230 vs. Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.9e-20
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 1 

Query: 2   SRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETS 61
           +R +R+   DPD TDSSS + E +       +R V++    ++  S +    S    E+ 
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 62  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 121
                   +      + +    T T T E+   ++RGVRQR WG+WAAEIRDP KR R+W
Sbjct: 94  KRQKRAVKSESTVSPVVSA---TTTTTGEK---KFRGVRQRPWGKWAAEIRDPLKRVRLW 153

Query: 122 LGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRF 157
           LGTYNTAEEA+  Y++  ++ +      P A T F
Sbjct: 154 LGTYNTAEEAAMVYDNAAIQLR-----GPDALTNF 177

[Close]
BLAST of Cucsa.256230 vs. Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKS-KRIVREIHFPLFASSNSSSDSSIHDEETS 62
           +K+ +   DPD TDSSS E+E D     +  KR V EI     + +N  +  S+ D +  
Sbjct: 37  KKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEP-SCNNVVTGVSMKDRKRL 96

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
            +SS  T +    +Q  N +V     +      ++RGVRQR WG+WAAEIRDP +R R+W
Sbjct: 97  SSSSDETQSPASSRQRPNNKV-----SVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRF 157
           LGT+ TAEEA+  Y++  +  +      P A T F
Sbjct: 157 LGTFETAEEAAVVYDNAAIRLR-----GPDALTNF 180

[Close]
BLAST of Cucsa.256230 vs. Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=1 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.1e-17
Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESN--SSKSKRIVREIHFPLFASSNSSSDSSIHDE 60
           + R +R+   DP  TDSSS E E  + +  S+K +R+ + +   +        DS + D+
Sbjct: 9   LPRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVL-------DSVVSDK 68

Query: 61  ETSHTSSHHTNNGGKP-QQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKR 120
           E             KP ++    RV+T  +     T ++RGVRQR WG+WAAEIRDP +R
Sbjct: 69  E-------------KPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRR 128

Query: 121 ARVWLGTYNTAEEASRAYESKRLEFQSAMA 148
            RVWLGT++TAEEA+  Y++  ++ +   A
Sbjct: 129 VRVWLGTFDTAEEAAIVYDNAAIQLRGPNA 138

[Close]
BLAST of Cucsa.256230 vs. TrEMBL
Match: A0A0A0L811_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133130 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.4e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET
Sbjct: 50  MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 109

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 110 SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]
BLAST of Cucsa.256230 vs. TrEMBL
Match: A0A0A0K880_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039270 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.3e-46
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERD-ESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEE 60
           MSRKIRVICNDPD TDSSSSE+E + ++   K KRIVREIH P F    S S   +    
Sbjct: 28  MSRKIRVICNDPDATDSSSSEDEGEIQTKPLKLKRIVREIHLPPFPFHPSKS---MDVTT 87

Query: 61  TSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
           ++ +SS  +NNGGK Q+L   RVL KTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK AR
Sbjct: 88  STPSSSQDSNNGGKNQELKKKRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 147

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMAAAPKA 153
           +WLGTYNTAEEAS+AYESKRLEF+SA+AAAPK+
Sbjct: 148 IWLGTYNTAEEASQAYESKRLEFESALAAAPKS 177

[Close]
BLAST of Cucsa.256230 vs. TrEMBL
Match: A0A0A0KWF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609620 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.4e-32
Identity = 83/160 (51.88%), Postives = 104/160 (65.00%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60
           M RK+R+IC DPD TDSSSSE+E  E+ + K  RIV EIH P    S  S          
Sbjct: 29  MRRKLRIICYDPDATDSSSSEDE-GETYARKFNRIVHEIHLPPLKKSLESE--------- 88

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPER-TTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
              SS ++NN  K  +    + L K  +  R ++S+YRGVRQR WG+WAAEIRDPFKR+R
Sbjct: 89  ---SSQNSNNENKNLKFKQSKALFKNPSSRRPSSSKYRGVRQRSWGKWAAEIRDPFKRSR 148

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGS 160
           VWLGTY+TAEEAS+AYES+RL+F++ MAA        KGS
Sbjct: 149 VWLGTYDTAEEASQAYESRRLQFET-MAAEMAVEEEGKGS 174

[Close]
BLAST of Cucsa.256230 vs. TrEMBL
Match: F6HEX1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03470 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.2e-32
Identity = 80/151 (52.98%), Postives = 102/151 (67.55%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSK-SKRIVREIHFPLFASSNSSSDSSIHDEETS 62
           RKIRVIC DP+ TDSSSSE+E   S   K  KRIVREI+ P+  S  S++  +       
Sbjct: 28  RKIRVICYDPEATDSSSSEDEGGISKREKRGKRIVREINLPVAGSPQSNAIET------- 87

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
            +S   +NNGGK  +   +R        +  +S+YRGVRQRKWG+WAAEIRDPF+  RVW
Sbjct: 88  ESSCQDSNNGGKNPKKRFLR--------KPPSSKYRGVRQRKWGKWAAEIRDPFRGVRVW 147

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMAAAPKA 153
           LGTYNT EEA++AYESKRLEF++  A+A K+
Sbjct: 148 LGTYNTPEEAAKAYESKRLEFEAMAASANKS 163

[Close]
BLAST of Cucsa.256230 vs. TrEMBL
Match: W9RLP9_9ROSA (Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_014665 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-30
Identity = 74/149 (49.66%), Postives = 94/149 (63.09%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKS-----KRIVREIHFPLFASSNSSSDSSI 60
           + RKIRVIC+DP  TDSSSS++E +     +      KRIVREI+ PL      S DSS 
Sbjct: 20  LMRKIRVICSDPYATDSSSSDDEGERERFQRKSSYLCKRIVREIYLPLLQKPTKSLDSSE 79

Query: 61  HDEETSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPF 120
              + S+     T    K     N +       P  ++S YRGVRQRKWG+WAAEIRDPF
Sbjct: 80  SSSQDSNNGVVTTTPNNKTPTNPNRKRRVLANRPRTSSSPYRGVRQRKWGKWAAEIRDPF 139

Query: 121 KRARVWLGTYNTAEEASRAYESKRLEFQS 145
           K +R+WLGTYNT E+AS+AYE+KRLEF++
Sbjct: 140 KGSRLWLGTYNTPEDASQAYEAKRLEFEA 168

[Close]
BLAST of Cucsa.256230 vs. TAIR10
Match: AT1G68550.1 (AT1G68550.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 66/146 (45.21%), Postives = 85/146 (58.22%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSS-ENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETS 62
           RK+R+I NDP  TD SSS E E       K KRIVREI+FP    S   S+SS  D    
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDS--- 96

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
                 T   GK         +  + +P     +  GVRQRKWG+WAAEIRDP K+ R W
Sbjct: 97  ------TKTDGK---------IAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMA 148
           LGT++T EEA++AY++K+LEF + +A
Sbjct: 157 LGTFDTLEEAAKAYDAKKLEFDAIVA 164

[Close]
BLAST of Cucsa.256230 vs. TAIR10
Match: AT3G25890.1 (AT3G25890.1 Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-23
Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETSH 62
           RK+R + NDP  TD SSSE   +E  S + KR V EI  P   ++  +   S + +E+++
Sbjct: 41  RKLRFVVNDPYATDYSSSE---EEERSQRRKRYVCEIDLPFAQAATQAESESSYCQESNN 100

Query: 63  TSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWL 122
                T      +++   +          T S+  GVRQRKWG+WAAEIR P  + R WL
Sbjct: 101 NGVSKTKISACSKKVLRSKASPVVGRSSTTVSKPVGVRQRKWGKWAAEIRHPITKVRTWL 160

Query: 123 GTYNTAEEASRAYESKRLEFQSAMAAAPKA 153
           GTY T E+A+ AY +K+LEF  A+AAA  A
Sbjct: 161 GTYETLEQAADAYATKKLEF-DALAAATSA 186

[Close]
BLAST of Cucsa.256230 vs. TAIR10
Match: AT4G23750.1 (AT4G23750.1 cytokinin response factor 2)

HSP 1 Score: 98.2 bits (243), Expect = 5.0e-21
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 1 

Query: 2   SRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETS 61
           +R +R+   DPD TDSSS + E +       +R V++    ++  S +    S    E+ 
Sbjct: 34  TRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQMESK 93

Query: 62  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 121
                   +      + +    T T T E+   ++RGVRQR WG+WAAEIRDP KR R+W
Sbjct: 94  KRQKRAVKSESTVSPVVSA---TTTTTGEK---KFRGVRQRPWGKWAAEIRDPLKRVRLW 153

Query: 122 LGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRF 157
           LGTYNTAEEA+  Y++  ++ +      P A T F
Sbjct: 154 LGTYNTAEEAAMVYDNAAIQLR-----GPDALTNF 177

[Close]
BLAST of Cucsa.256230 vs. TAIR10
Match: AT5G53290.1 (AT5G53290.1 cytokinin response factor 3)

HSP 1 Score: 94.4 bits (233), Expect = 7.2e-20
Identity = 58/155 (37.42%), Postives = 84/155 (54.19%), Query Frame = 1 

Query: 3   RKIRVICNDPDGTDSSSSENERDESNSSKS-KRIVREIHFPLFASSNSSSDSSIHDEETS 62
           +K+ +   DPD TDSSS E+E D     +  KR V EI     + +N  +  S+ D +  
Sbjct: 37  KKVSICYTDPDATDSSSDEDEEDFLFPRRRVKRFVNEITVEP-SCNNVVTGVSMKDRKRL 96

Query: 63  HTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
            +SS  T +    +Q  N +V     +      ++RGVRQR WG+WAAEIRDP +R R+W
Sbjct: 97  SSSSDETQSPASSRQRPNNKV-----SVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRF 157
           LGT+ TAEEA+  Y++  +  +      P A T F
Sbjct: 157 LGTFETAEEAAVVYDNAAIRLR-----GPDALTNF 180

[Close]
BLAST of Cucsa.256230 vs. TAIR10
Match: AT4G11140.1 (AT4G11140.1 cytokinin response factor 1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-18
Identity = 54/150 (36.00%), Postives = 83/150 (55.33%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESN--SSKSKRIVREIHFPLFASSNSSSDSSIHDE 60
           + R +R+   DP  TDSSS E E  + +  S+K +R+ + +   +        DS + D+
Sbjct: 9   LPRILRISVTDPYATDSSSDEEEEVDFDALSTKRRRVKKYVKEVVL-------DSVVSDK 68

Query: 61  ETSHTSSHHTNNGGKP-QQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKR 120
           E             KP ++    RV+T  +     T ++RGVRQR WG+WAAEIRDP +R
Sbjct: 69  E-------------KPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRR 128

Query: 121 ARVWLGTYNTAEEASRAYESKRLEFQSAMA 148
            RVWLGT++TAEEA+  Y++  ++ +   A
Sbjct: 129 VRVWLGTFDTAEEAAIVYDNAAIQLRGPNA 138

[Close]
BLAST of Cucsa.256230 vs. NCBI nr
Match: gi|449433193|ref|XP_004134382.1| (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.0e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 164

[Close]
BLAST of Cucsa.256230 vs. NCBI nr
Match: gi|700201629|gb|KGN56762.1| (hypothetical protein Csa_3G133130 [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.0e-88
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET
Sbjct: 50  MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 109

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 110 SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]
BLAST of Cucsa.256230 vs. NCBI nr
Match: gi|659077741|ref|XP_008439360.1| (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 158/164 (96.34%), Postives = 162/164 (98.78%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEET 60
           MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPL  SSNS+S+SSIHDEET
Sbjct: 1   MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLLPSSNSTSNSSIHDEET 60

Query: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  SHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPK+PTRFKGSH+LGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]
BLAST of Cucsa.256230 vs. NCBI nr
Match: gi|659089721|ref|XP_008445662.1| (PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-46
Identity = 103/154 (66.88%), Postives = 124/154 (80.52%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERD-ESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEE 60
           M+RKIRVICNDPD TDSSSSE+E + ++ S K KRIVREIH PLF S +S S   +    
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEVQTKSLKLKRIVREIHLPLFPSHSSKS---MDVTT 87

Query: 61  TSHTSSHHTNNGGKPQQLTNIRVL-TKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRA 120
           ++ +SS  +NNGGK  +L   RVL TKTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK A
Sbjct: 88  STPSSSQDSNNGGKNLELKKKRVLGTKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGA 147

Query: 121 RVWLGTYNTAEEASRAYESKRLEFQSAMAAAPKA 153
           R+WLGTYNTAEEAS+AYESKRLEF++AMAAAPK+
Sbjct: 148 RIWLGTYNTAEEASQAYESKRLEFETAMAAAPKS 178

[Close]
BLAST of Cucsa.256230 vs. NCBI nr
Match: gi|449446199|ref|XP_004140859.1| (PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-46
Identity = 101/153 (66.01%), Postives = 120/153 (78.43%), Query Frame = 1 

Query: 1   MSRKIRVICNDPDGTDSSSSENERD-ESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEE 60
           MSRKIRVICNDPD TDSSSSE+E + ++   K KRIVREIH P F    S S   +    
Sbjct: 28  MSRKIRVICNDPDATDSSSSEDEGEIQTKPLKLKRIVREIHLPPFPFHPSKS---MDVTT 87

Query: 61  TSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
           ++ +SS  +NNGGK Q+L   RVL KTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK AR
Sbjct: 88  STPSSSQDSNNGGKNQELKKKRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 147

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMAAAPKA 153
           +WLGTYNTAEEAS+AYESKRLEF+SA+AAAPK+
Sbjct: 148 IWLGTYNTAEEASQAYESKRLEFESALAAAPKS 177

The following BLAST results are available for this feature:
BLAST of Cucsa.256230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EF118_ARATH2.4e-2545.21Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana GN=ERF11... [more]
EF119_ARATH1.9e-2240.00Ethylene-responsive transcription factor ERF119 OS=Arabidopsis thaliana GN=ERF11... [more]
CRF2_ARATH8.9e-2035.48Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE... [more]
CRF3_ARATH1.3e-1837.42Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE... [more]
CRF1_ARATH4.1e-1736.00Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE... [more]
BLAST of Cucsa.256230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L811_CUCSA1.4e-88100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G133130 PE=4 SV=1[more]
A0A0A0K880_CUCSA2.3e-4666.01Uncharacterized protein OS=Cucumis sativus GN=Csa_6G039270 PE=4 SV=1[more]
A0A0A0KWF1_CUCSA5.4e-3251.88Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609620 PE=4 SV=1[more]
F6HEX1_VITVI9.2e-3252.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03470 PE=4 SV=... [more]
W9RLP9_9ROSA1.7e-3049.66Ethylene-responsive transcription factor OS=Morus notabilis GN=L484_014665 PE=4 ... [more]
BLAST of Cucsa.256230 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68550.11.4e-2645.21 Integrase-type DNA-binding superfamily protein[more]
AT3G25890.11.1e-2340.00 Integrase-type DNA-binding superfamily protein[more]
AT4G23750.15.0e-2135.48 cytokinin response factor 2[more]
AT5G53290.17.2e-2037.42 cytokinin response factor 3[more]
AT4G11140.12.3e-1836.00 cytokinin response factor 1[more]
BLAST of Cucsa.256230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449433193|ref|XP_004134382.1|2.0e-88100.00PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus... [more]
gi|700201629|gb|KGN56762.1|2.0e-88100.00hypothetical protein Csa_3G133130 [Cucumis sativus][more]
gi|659077741|ref|XP_008439360.1|1.6e-8596.34PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo][more]
gi|659089721|ref|XP_008445662.1|1.1e-4666.88PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis melo][more]
gi|449446199|ref|XP_004140859.1|3.2e-4666.01PREDICTED: ethylene-responsive transcription factor ERF118 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
IPR017392AP2/ERF-transcript_factor
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.256230.1Cucsa.256230.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 118..134
score: 7.9E-11coord: 96..107
score: 7.9
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 95..147
score: 1.0
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 94..142
score: 5.6
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 95..149
score: 3.0
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 95..157
score: 2
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 94..146
score: 1.18
IPR017392AP2/ERF transcription factor ERF/PTI6PIRPIRSF038123PTI6coord: 1..156
score: 7.7
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 1..148
score: 4.7
NoneNo IPR availablePANTHERPTHR31190:SF17SUBFAMILY NOT NAMEDcoord: 1..148
score: 4.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.256230Cla021440Watermelon (97103) v1cgywmB479
Cucsa.256230Csa3G133130Cucumber (Chinese Long) v2cgycuB366
Cucsa.256230MELO3C006333Melon (DHL92) v3.5.1cgymeB439
Cucsa.256230CSPI03G11120Wild cucumber (PI 183967)cgycpiB383
Cucsa.256230CmaCh14G018770Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.256230CmaCh06G012630Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.256230CmoCh14G019250Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.256230CmoCh06G012720Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.256230Lsi05G018170Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.256230MELO3C006333.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.256230CsaV3_3G011230Cucumber (Chinese Long) v3cgycucB387
Cucsa.256230Cla97C05G084190Watermelon (97103) v2cgywmbB452
Cucsa.256230Bhi01G000042Wax gourdcgywgoB526
Cucsa.256230Carg16508Silver-seed gourdcarcgyB0276
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.256230Silver-seed gourdcarcgyB1077
Cucsa.256230Silver-seed gourdcarcgyB0269
Cucsa.256230Silver-seed gourdcarcgyB0887
Cucsa.256230Silver-seed gourdcarcgyB1190
Cucsa.256230Cucumber (Chinese Long) v3cgycucB383
Cucsa.256230Cucumber (Chinese Long) v3cgycucB386
Cucsa.256230Watermelon (97103) v2cgywmbB453
Cucsa.256230Watermelon (97103) v2cgywmbB456
Cucsa.256230Wax gourdcgywgoB510
Cucsa.256230Wax gourdcgywgoB528
Cucsa.256230Cucumber (Gy14) v1cgycgyB090
Cucsa.256230Cucurbita maxima (Rimu)cgycmaB0715
Cucsa.256230Cucurbita maxima (Rimu)cgycmaB0717
Cucsa.256230Cucurbita maxima (Rimu)cgycmaB0719
Cucsa.256230Cucurbita maxima (Rimu)cgycmaB0732
Cucsa.256230Cucurbita moschata (Rifu)cgycmoB0708
Cucsa.256230Cucurbita moschata (Rifu)cgycmoB0710
Cucsa.256230Cucurbita moschata (Rifu)cgycmoB0713
Cucsa.256230Cucurbita moschata (Rifu)cgycmoB0721
Cucsa.256230Wild cucumber (PI 183967)cgycpiB377
Cucsa.256230Wild cucumber (PI 183967)cgycpiB381
Cucsa.256230Cucumber (Chinese Long) v2cgycuB361
Cucsa.256230Cucumber (Chinese Long) v2cgycuB365
Cucsa.256230Melon (DHL92) v3.5.1cgymeB434
Cucsa.256230Watermelon (Charleston Gray)cgywcgB451
Cucsa.256230Watermelon (Charleston Gray)cgywcgB452
Cucsa.256230Watermelon (Charleston Gray)cgywcgB457
Cucsa.256230Watermelon (97103) v1cgywmB476
Cucsa.256230Watermelon (97103) v1cgywmB483
Cucsa.256230Cucurbita pepo (Zucchini)cgycpeB0670
Cucsa.256230Cucurbita pepo (Zucchini)cgycpeB0675
Cucsa.256230Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.256230Cucurbita pepo (Zucchini)cgycpeB0683
Cucsa.256230Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.256230Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.256230Bottle gourd (USVL1VR-Ls)cgylsiB417
Cucsa.256230Melon (DHL92) v3.6.1cgymedB429