CsGy3G011180 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G011180
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ethylene-responsive transcription factor ERF118-like
Location	Chr3 : 8705514 .. 8706008 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTCGAAAAATCCGCGTAATCTGCAACGACCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCCTTTTCGCTTCTTCTAACTCTTCATCTGATTCTTCAATTCATGATGAGGAAACCTCTCACACCTCTTCTCACCACACCAACAATGGCGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATATAGAGGCGTGAGGCAGAGGAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGAGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCTGCTCCTAAAGCTCCGACGAGGTTCAAAGGTTCTCATCTACTGGGTTATTGA

mRNA sequence

ATGAGTCGAAAAATCCGCGTAATCTGCAACGACCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCCTTTTCGCTTCTTCTAACTCTTCATCTGATTCTTCAATTCATGATGAGGAAACCTCTCACACCTCTTCTCACCACACCAACAATGGCGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATATAGAGGCGTGAGGCAGAGGAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGAGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCTGCTCCTAAAGCTCCGACGAGGTTCAAAGGTTCTCATCTACTGGGTTATTGA

Coding sequence (CDS)

ATGAGTCGAAAAATCCGCGTAATCTGCAACGACCCAGACGGAACCGATTCATCATCAAGCGAAAACGAAAGAGATGAATCAAATTCTTCAAAATCCAAACGCATAGTACGAGAAATTCACTTCCCCCTTTTCGCTTCTTCTAACTCTTCATCTGATTCTTCAATTCATGATGAGGAAACCTCTCACACCTCTTCTCACCACACCAACAATGGCGGAAAACCCCAACAGCTAACAAACATTAGGGTTTTGACCAAAACCCTAACGCCCGAAAGAACAACCTCCCGATATAGAGGCGTGAGGCAGAGGAAATGGGGGAGATGGGCTGCTGAAATTCGAGACCCCTTTAAGAGAGCTCGAGTTTGGCTTGGTACTTATAATACTGCTGAGGAAGCTTCTAGGGCTTACGAATCGAAGCGGCTTGAGTTTCAATCTGCCATGGCCGCTGCTCCTAAAGCTCCGACGAGGTTCAAAGGTTCTCATCTACTGGGTTATTGA

Protein sequence

MSRKIRVICNDPDGTDSSSSENERDESNSSKSKRIVREIHFPLFASSNSSSDSSIHDEETSHTSSHHTNNGGKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY

Homology

[Close]

BLAST of CsGy3G011180 vs. NCBI nr
Match: XP_004134382.1 (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-55
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX
Sbjct: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 164

[Close]

BLAST of CsGy3G011180 vs. NCBI nr
Match: KGN56762.1 (hypothetical protein Csa_3G133130 [Cucumis sativus])

HSP 1 Score: 223.0 bits (567), Expect = 7.4e-55
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXX IVREIHFPLFAXXXXXXXXXXXXXXX
Sbjct: 50  MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXXIVREIHFPLFAXXXXXXXXXXXXXXX 109

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 110 XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]

BLAST of CsGy3G011180 vs. NCBI nr
Match: XP_008439360.1 (PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo])

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPL   XXXXXXXXXXXXXX
Sbjct: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLLPSXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           XXXXXXXXXXXX PQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  XXXXXXXXXXXXKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPK+PTRFKGSH+LGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]

BLAST of CsGy3G011180 vs. NCBI nr
Match: XP_022980438.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita maxima])

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 113/164 (68.90%), Postives = 119/164 (72.56%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRK+RVICNDPDGTD     XXXXXXXXXXXX            XXXXXXXXXX     
Sbjct: 1   MSRKLRVICNDPDGTD----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDDEA 60

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
                          Q  NIRVL+KTL  ERT  RYRGVRQRKWG+WAAEIRDPFKRAR+
Sbjct: 61  SQSSARGGSNGGKAHQRRNIRVLSKTLPTERTACRYRGVRQRKWGKWAAEIRDPFKRARI 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQ+AMAAAPKAP RFK SHLLG+
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQAAMAAAPKAPPRFKASHLLGF 160

[Close]

BLAST of CsGy3G011180 vs. NCBI nr
Match: XP_022924585.1 (ethylene-responsive transcription factor ERF118-like [Cucurbita moschata] >XP_023528036.1 ethylene-responsive transcription factor ERF118-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.1 bits (396), Expect = 5.0e-35
Identity = 123/164 (75.00%), Postives = 129/164 (78.66%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRK+RVICNDPDGT    XXXXXXXXXXXXXX            XXXXXXXXXXXXXXX
Sbjct: 1   MSRKLRVICNDPDGT----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           XXXXX          Q  NIRVL+KTL   RT  RYRGVRQRKWG+WAAEIRDPFKRAR+
Sbjct: 61  XXXXXRGGSNGGKAHQRRNIRVLSKTLPTGRTACRYRGVRQRKWGKWAAEIRDPFKRARI 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQ+AMAAAPKAP RFK SHLLG+
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQAAMAAAPKAPPRFKASHLLGF 160

[Close]

BLAST of CsGy3G011180 vs. TAIR10
Match: AT1G28370.1 (ERF domain protein 11)

HSP 1 Score: 82.4 bits (202), Expect = 2.8e-16
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 88  TPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMA 147
           T E    RYRGVR+R WGR+AAEIRDPFK++RVWLGT++T EEA+RAY+ + +EF+ A A
Sbjct: 12  TNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKA 71

[Close]

BLAST of CsGy3G011180 vs. TAIR10
Match: AT1G68550.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 82.0 bits (201), Expect = 3.7e-16
Identity = 51/146 (34.93%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 3   RKIRVICNDPDGT-DXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXXX 62
           RK+R+I NDP  T D                 RIVREI+FP                   
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDSTKT 96

Query: 63  XXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
                                +  + +P     +  GVRQRKWG+WAAEIRDP K+ R W
Sbjct: 97  DGK------------------IAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMA 148
           LGT++T EEA++AY++K+LEF + +A
Sbjct: 157 LGTFDTLEEAAKAYDAKKLEFDAIVA 164

[Close]

BLAST of CsGy3G011180 vs. TAIR10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.4e-15
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 95  RYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMA 148
           RYRGVRQR WG+WAAEIRDPFK ARVWLGT++ AE A+RAY+   L F+   A
Sbjct: 184 RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKA 236

[Close]

BLAST of CsGy3G011180 vs. TAIR10
Match: AT1G72360.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 3.1e-15
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 90  ERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMA 148
           ++ +SRY+G+R+R WGRWAAEIRDP K  RVWLGT+NTAEEA+RAY+ +    + A A
Sbjct: 70  KKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKA 127

[Close]

BLAST of CsGy3G011180 vs. TAIR10
Match: AT5G44210.1 (erf domain protein 9)

HSP 1 Score: 77.8 bits (190), Expect = 6.9e-15
Identity = 37/64 (57.81%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 84  TKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQ 143
           T T+T  R    +RGVR+R WGR+AAEIRDP K+ RVWLGT++TAEEA+RAY++   EF+
Sbjct: 21  TMTMTTMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFR 80

Query: 144 SAMA 148
            + A
Sbjct: 81  GSKA 84

[Close]

BLAST of CsGy3G011180 vs. Swiss-Prot
Match: sp|Q9C5I3|ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.1e-15
Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 88  TPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMA 147
           T E    RYRGVR+R WGR+AAEIRDPFK++RVWLGT++T EEA+RAY+ + +EF+ A A
Sbjct: 12  TNEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKA 71

[Close]

BLAST of CsGy3G011180 vs. Swiss-Prot
Match: sp|Q9CA27|EF118_ARATH (Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 GN=ERF118 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 6.6e-15
Identity = 51/146 (34.93%), Postives = 69/146 (47.26%), Query Frame = 0


Query: 3   RKIRVICNDPDGT-DXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXXX 62
           RK+R+I NDP  T D                 RIVREI+FP                   
Sbjct: 37  RKVRIIVNDPYATDDSSSDEEELKVPKPRKMKRIVREINFPSMEVSEQPSESSSQDSTKT 96

Query: 63  XXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARVW 122
                                +  + +P     +  GVRQRKWG+WAAEIRDP K+ R W
Sbjct: 97  DGK------------------IAVSASPAVPRKKPVGVRQRKWGKWAAEIRDPIKKTRTW 156

Query: 123 LGTYNTAEEASRAYESKRLEFQSAMA 148
           LGT++T EEA++AY++K+LEF + +A
Sbjct: 157 LGTFDTLEEAAKAYDAKKLEFDAIVA 164

[Close]

BLAST of CsGy3G011180 vs. Swiss-Prot
Match: sp|Q9FGF8|ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.3e-14
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 95  RYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMA 148
           RYRGVRQR WG+WAAEIRDPFK ARVWLGT++ AE A+RAY+   L F+   A
Sbjct: 184 RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKA 236

[Close]

BLAST of CsGy3G011180 vs. Swiss-Prot
Match: sp|Q6K7E6|ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=EREBP1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.6e-14
Identity = 37/63 (58.73%), Postives = 50/63 (79.37%), Query Frame = 0


Query: 94  SRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAY--ESKRLEFQSAMAAAPK 153
           +++RG+RQR WG+WAAEIRDP K  RVWLGT+N+AEEA+RAY  E++R+  + A    P+
Sbjct: 118 NQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPE 177

Query: 154 APT 155
           APT
Sbjct: 178 APT 180

[Close]

BLAST of CsGy3G011180 vs. Swiss-Prot
Match: sp|Q8H0T5|ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 GN=ERF073 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.6e-14
Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 90  ERTTSRYRGVRQRKWGRWAAEIRDPFKRARVWLGTYNTAEEASRAYESKRLEFQSAMA 148
           ++ +SRY+G+R+R WGRWAAEIRDP K  RVWLGT+NTAEEA+RAY+ +    + A A
Sbjct: 19  KKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKA 76

[Close]

BLAST of CsGy3G011180 vs. TrEMBL
Match: tr|A0A0A0L811|A0A0A0L811_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133130 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.9e-55
Identity = 163/164 (99.39%), Postives = 163/164 (99.39%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXX IVREIHFPLFAXXXXXXXXXXXXXXX
Sbjct: 50  MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXXIVREIHFPLFAXXXXXXXXXXXXXXX 109

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 110 XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 169

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY
Sbjct: 170 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 213

[Close]

BLAST of CsGy3G011180 vs. TrEMBL
Match: tr|A0A1S3AYM8|A0A1S3AYM8_CUCME (ethylene-responsive transcription factor ERF118-like OS=Cucumis melo OX=3656 GN=LOC103484175 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 9.2e-54
Identity = 158/164 (96.34%), Postives = 160/164 (97.56%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXXX 60
           MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPL   XXXXXXXXXXXXXX
Sbjct: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPLLPSXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120
           XXXXXXXXXXXX PQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV
Sbjct: 61  XXXXXXXXXXXXKPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRARV 120

Query: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKAPTRFKGSHLLGY 165
           WLGTYNTAEEASRAYESKRLEFQSAMAAAPK+PTRFKGSH+LGY
Sbjct: 121 WLGTYNTAEEASRAYESKRLEFQSAMAAAPKSPTRFKGSHVLGY 164

[Close]

BLAST of CsGy3G011180 vs. TrEMBL
Match: tr|A0A1S3BD92|A0A1S3BD92_CUCME (ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC103488620 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.3e-28
Identity = 79/148 (53.38%), Postives = 89/148 (60.14%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTD-XXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXX 60
           M+RKIRVICNDPD TD                  RIVREIH PLF               
Sbjct: 28  MTRKIRVICNDPDATDSSSSEDEGEVQTKSLKLKRIVREIHLPLFPSHSSKSMDVTTSTP 87

Query: 61  XXXXXXXXXXXXXXPQQLTNIRVL-TKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRA 120
                           +L   RVL TKTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK A
Sbjct: 88  SSSQDSNNGGKNL---ELKKKRVLGTKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGA 147

Query: 121 RVWLGTYNTAEEASRAYESKRLEFQSAM 147
           R+WLGTYNTAEEAS+AYESKRLEF++AM
Sbjct: 148 RIWLGTYNTAEEASQAYESKRLEFETAM 172

[Close]

BLAST of CsGy3G011180 vs. TrEMBL
Match: tr|A0A0A0K880|A0A0A0K880_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039270 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.7e-28
Identity = 90/147 (61.22%), Postives = 98/147 (66.67%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTD-XXXXXXXXXXXXXXXXXRIVREIHFPLFAXXXXXXXXXXXXXX 60
           MSRKIRVICNDPD TD                  RIVREIH P F               
Sbjct: 28  MSRKIRVICNDPDATDSSSSEDEGEIQTKPLKLKRIVREIHLPPF---PFHPSKSMDVTT 87

Query: 61  XXXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
            XXXXXXXXXXXXX       RVL KTL+  R+ S+YRGVRQRKWG+WAAEIRDPFK AR
Sbjct: 88  SXXXXXXXXXXXXXXXXXXXXRVLAKTLSTRRSASQYRGVRQRKWGKWAAEIRDPFKGAR 147

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAM 147
           +WLGTYNTAEEAS+AYESKRLEF+SA+
Sbjct: 148 IWLGTYNTAEEASQAYESKRLEFESAL 171

[Close]

BLAST of CsGy3G011180 vs. TrEMBL
Match: tr|A0A2P4IMX7|A0A2P4IMX7_QUESU (Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_38095 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 65/148 (43.92%), Postives = 80/148 (54.05%), Query Frame = 0


Query: 1   MSRKIRVICNDPDGTDXXXXXXXXXXXXXXXXXRIVREIHFPL-FAXXXXXXXXXXXXXX 60
           M RK+RVIC+DP  TD                 + +REI+ PL                 
Sbjct: 27  MMRKVRVICSDPYATDSSSSEDECEDRRAKKCKKFIREINLPLVLKQQSKPSSLESESSC 86

Query: 61  XXXXXXXXXXXXXXPQQLTNIRVLTKTLTPERTTSRYRGVRQRKWGRWAAEIRDPFKRAR 120
                          +     RVL KT +   ++S+YRGVRQRKWG+WAAEIRDPFK AR
Sbjct: 87  QDSNNNNGTKTPNIVEARQKKRVLAKTPSRRPSSSKYRGVRQRKWGKWAAEIRDPFKGAR 146

Query: 121 VWLGTYNTAEEASRAYESKRLEFQSAMA 148
           +WLGTYNT EEAS AYE KRL+F++AMA
Sbjct: 147 IWLGTYNTPEEASEAYERKRLQFEAAMA 174

The following BLAST results are available for this feature:

BLAST of CsGy3G011180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134382.1	1.5e-55	100.00	PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis sativus...	[more]
KGN56762.1	7.4e-55	99.39	hypothetical protein Csa_3G133130 [Cucumis sativus]	[more]
XP_008439360.1	1.4e-53	96.34	PREDICTED: ethylene-responsive transcription factor ERF118-like [Cucumis melo]	[more]
XP_022980438.1	1.2e-36	68.90	ethylene-responsive transcription factor ERF118-like [Cucurbita maxima]	[more]
XP_022924585.1	5.0e-35	75.00	ethylene-responsive transcription factor ERF118-like [Cucurbita moschata] >XP_02...	[more]

BLAST of CsGy3G011180 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28370.1	2.8e-16	63.33	ERF domain protein 11	[more]
AT1G68550.1	3.7e-16	34.93	Integrase-type DNA-binding superfamily protein	[more]
AT5G64750.1	2.4e-15	67.92	Integrase-type DNA-binding superfamily protein	[more]
AT1G72360.2	3.1e-15	60.34	Integrase-type DNA-binding superfamily protein	[more]
AT5G44210.1	6.9e-15	57.81	erf domain protein 9	[more]

BLAST of CsGy3G011180 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C5I3\|ERF76_ARATH	5.1e-15	63.33	Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
sp\|Q9CA27\|EF118_ARATH	6.6e-15	34.93	Ethylene-responsive transcription factor ERF118 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FGF8\|ABR1_ARATH	4.3e-14	67.92	Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q6K7E6\|ERF1_ORYSJ	5.6e-14	58.73	Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
sp\|Q8H0T5\|ERF73_ARATH	5.6e-14	60.34	Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsGy3G011180 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L811\|A0A0A0L811_CUCSA	4.9e-55	99.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133130 PE=4 SV=1	[more]
tr\|A0A1S3AYM8\|A0A1S3AYM8_CUCME	9.2e-54	96.34	ethylene-responsive transcription factor ERF118-like OS=Cucumis melo OX=3656 GN=...	[more]
tr\|A0A1S3BD92\|A0A1S3BD92_CUCME	2.3e-28	53.38	ethylene-responsive transcription factor ERF118 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0K880\|A0A0A0K880_CUCSA	8.7e-28	61.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G039270 PE=4 SV=1	[more]
tr\|A0A2P4IMX7\|A0A2P4IMX7_QUESU	1.9e-22	43.92	Ethylene-responsive transcription factor OS=Quercus suber OX=58331 GN=CFP56_3809...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR017392	AP2/ERF-transcript_factor
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G011180.1	CsGy3G011180.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 118..134 score: 63.96 coord: 96..107 score: 68.03
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 95..149 e-value: 3.0E-16 score: 70.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 94..142 e-value: 8.6E-13 score: 48.2
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 95..157 score: 20.85
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 94..148 e-value: 2.03954E-22 score: 85.0159
IPR017392	AP2/ERF transcription factor ERF/PTI6	PIRSF	PIRSF038123	PTI6	coord: 1..156 e-value: 9.4E-32 score: 108.6
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 94..157 e-value: 7.9E-22 score: 78.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..38
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 2..148
None	No IPR available	PANTHER	PTHR31190:SF61	SUBFAMILY NOT NAMED	coord: 2..148
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 94..146

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G011180	Cla021440	Watermelon (97103) v1	cgybwmB217
CsGy3G011180	Csa3G133130	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G011180	MELO3C006333	Melon (DHL92) v3.5.1	cgybmeB200
CsGy3G011180	CSPI03G11120	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G011180	CmaCh06G012630	Cucurbita maxima (Rimu)	cgybcmaB427
CsGy3G011180	CmaCh14G018770	Cucurbita maxima (Rimu)	cgybcmaB318
CsGy3G011180	CmoCh06G012720	Cucurbita moschata (Rifu)	cgybcmoB401
CsGy3G011180	CmoCh14G019250	Cucurbita moschata (Rifu)	cgybcmoB290
CsGy3G011180	Lsi05G018170	Bottle gourd (USVL1VR-Ls)	cgyblsiB196
CsGy3G011180	MELO3C006333.2	Melon (DHL92) v3.6.1	cgybmedB201
CsGy3G011180	CsaV3_3G011230	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G011180	Cla97C05G084190	Watermelon (97103) v2	cgybwmbB196
CsGy3G011180	Bhi01G000042	Wax gourd	cgybwgoB265
CsGy3G011180	Carg16508	Silver-seed gourd	carcgybB0251

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G011180	Cucumber (Gy14) v2	cgybcgybB054
CsGy3G011180	Cucumber (Gy14) v2	cgybcgybB082
CsGy3G011180	Cucurbita maxima (Rimu)	cgybcmaB345
CsGy3G011180	Cucurbita maxima (Rimu)	cgybcmaB384
CsGy3G011180	Cucurbita maxima (Rimu)	cgybcmaB391
CsGy3G011180	Cucurbita maxima (Rimu)	cgybcmaB454
CsGy3G011180	Cucurbita moschata (Rifu)	cgybcmoB317
CsGy3G011180	Cucurbita moschata (Rifu)	cgybcmoB358
CsGy3G011180	Cucurbita moschata (Rifu)	cgybcmoB362
CsGy3G011180	Cucurbita moschata (Rifu)	cgybcmoB421
CsGy3G011180	Cucurbita pepo (Zucchini)	cgybcpeB302
CsGy3G011180	Cucurbita pepo (Zucchini)	cgybcpeB341
CsGy3G011180	Cucurbita pepo (Zucchini)	cgybcpeB354
CsGy3G011180	Cucurbita pepo (Zucchini)	cgybcpeB406
CsGy3G011180	Cucurbita pepo (Zucchini)	cgybcpeB432
CsGy3G011180	Cucurbita pepo (Zucchini)	cgybcpeB454
CsGy3G011180	Cucumber (Chinese Long) v2	cgybcuB121
CsGy3G011180	Bottle gourd (USVL1VR-Ls)	cgyblsiB136
CsGy3G011180	Bottle gourd (USVL1VR-Ls)	cgyblsiB204
CsGy3G011180	Melon (DHL92) v3.5.1	cgybmeB195
CsGy3G011180	Melon (DHL92) v3.6.1	cgybmedB197
CsGy3G011180	Watermelon (Charleston Gray)	cgybwcgB203
CsGy3G011180	Watermelon (Charleston Gray)	cgybwcgB230
CsGy3G011180	Watermelon (Charleston Gray)	cgybwcgB238
CsGy3G011180	Watermelon (97103) v1	cgybwmB209
CsGy3G011180	Watermelon (97103) v1	cgybwmB262
CsGy3G011180	Wild cucumber (PI 183967)	cgybcpiB109
CsGy3G011180	Wild cucumber (PI 183967)	cgybcpiB121
CsGy3G011180	Silver-seed gourd	carcgybB0245
CsGy3G011180	Silver-seed gourd	carcgybB0772
CsGy3G011180	Silver-seed gourd	carcgybB0948
CsGy3G011180	Silver-seed gourd	carcgybB1059
CsGy3G011180	Cucumber (Chinese Long) v3	cgybcucB125
CsGy3G011180	Watermelon (97103) v2	cgybwmbB222
CsGy3G011180	Watermelon (97103) v2	cgybwmbB231
CsGy3G011180	Wax gourd	cgybwgoB242
CsGy3G011180	Wax gourd	cgybwgoB293