MELO3C006240 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006240
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCytidylate kinase
Locationchr6 : 1945541 .. 1945777 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

mRNA sequence

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

Coding sequence (CDS)

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

Protein sequence

MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV*
Homology
[Close]
BLAST of MELO3C006240 vs. TrEMBL
Match: A0A0A0L4H2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127160 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-09
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 1 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60
          MSRLLSEIPHAPNT      F    +    P     P G+WAAAQSAIKADLAYLDRTI
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59

[Close]
BLAST of MELO3C006240 vs. NCBI nr
Match: gi|700201520|gb|KGN56653.1| (hypothetical protein Csa_3G127160 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-09
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 1 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60
          MSRLLSEIPHAPNT      F    +    P     P G+WAAAQSAIKADLAYLDRTI
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59

The following BLAST results are available for this feature:
BLAST of MELO3C006240 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4H2_CUCSA1.4e-0962.71Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127160 PE=4 SV=1[more]
BLAST of MELO3C006240 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201520|gb|KGN56653.1|2.0e-0962.71hypothetical protein Csa_3G127160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006240T1MELO3C006240T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006240Csa3G127160Cucumber (Chinese Long) v2cumeB236
MELO3C006240CSPI03G10050Wild cucumber (PI 183967)cpimeB230
MELO3C006240CsGy3G010150Cucumber (Gy14) v2cgybmeB200
MELO3C006240CsaV3_3G010200Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006240Silver-seed gourdcarmeB0236
MELO3C006240Silver-seed gourdcarmeB0622
MELO3C006240Silver-seed gourdcarmeB0941
MELO3C006240Silver-seed gourdcarmeB1049
MELO3C006240Cucumber (Chinese Long) v3cucmeB241
MELO3C006240Cucumber (Chinese Long) v3cucmeB244
MELO3C006240Cucumber (Chinese Long) v3cucmeB506
MELO3C006240Watermelon (97103) v2mewmbB428
MELO3C006240Watermelon (97103) v2mewmbB434
MELO3C006240Watermelon (97103) v2mewmbB445
MELO3C006240Wax gourdmewgoB513
MELO3C006240Wax gourdmewgoB522
MELO3C006240Wax gourdmewgoB531
MELO3C006240Melon (DHL92) v3.5.1memeB141
MELO3C006240Melon (DHL92) v3.5.1memeB054
MELO3C006240Cucumber (Gy14) v1cgymeB439
MELO3C006240Cucumber (Gy14) v1cgymeB533
MELO3C006240Cucumber (Gy14) v1cgymeB594
MELO3C006240Cucurbita maxima (Rimu)cmameB242
MELO3C006240Cucurbita maxima (Rimu)cmameB343
MELO3C006240Cucurbita maxima (Rimu)cmameB763
MELO3C006240Cucurbita maxima (Rimu)cmameB767
MELO3C006240Cucurbita maxima (Rimu)cmameB852
MELO3C006240Cucurbita moschata (Rifu)cmomeB230
MELO3C006240Cucurbita moschata (Rifu)cmomeB336
MELO3C006240Cucurbita moschata (Rifu)cmomeB755
MELO3C006240Cucurbita moschata (Rifu)cmomeB834
MELO3C006240Wild cucumber (PI 183967)cpimeB236
MELO3C006240Wild cucumber (PI 183967)cpimeB238
MELO3C006240Wild cucumber (PI 183967)cpimeB496
MELO3C006240Cucumber (Chinese Long) v2cumeB241
MELO3C006240Cucumber (Chinese Long) v2cumeB494
MELO3C006240Watermelon (Charleston Gray)mewcgB409
MELO3C006240Watermelon (Charleston Gray)mewcgB427
MELO3C006240Watermelon (Charleston Gray)mewcgB438
MELO3C006240Watermelon (97103) v1mewmB456
MELO3C006240Watermelon (97103) v1mewmB461
MELO3C006240Watermelon (97103) v1mewmB484
MELO3C006240Cucurbita pepo (Zucchini)cpemeB141
MELO3C006240Cucurbita pepo (Zucchini)cpemeB315
MELO3C006240Cucurbita pepo (Zucchini)cpemeB585
MELO3C006240Cucurbita pepo (Zucchini)cpemeB813
MELO3C006240Bottle gourd (USVL1VR-Ls)lsimeB034
MELO3C006240Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006240Bottle gourd (USVL1VR-Ls)lsimeB386
MELO3C006240Bottle gourd (USVL1VR-Ls)lsimeB445
MELO3C006240Cucumber (Gy14) v2cgybmeB205
MELO3C006240Cucumber (Gy14) v2cgybmeB208
MELO3C006240Cucumber (Gy14) v2cgybmeB435