MELO3C006240T1 (mRNA) Melon (DHL92) v3.5.1

Overview
NameMELO3C006240T1
TypemRNA
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCytidylate kinase
Locationchr6 : 1945541 .. 1945777 (+)
Sequence length237
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

mRNA sequence

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

Coding sequence (CDS)

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAACACTACGCTACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGGGGAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTGTCTGTTTAG

Protein sequence

MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTIVEKHLKGNWILYCSLKLSV*
Homology
[Close]
BLAST of MELO3C006240T1 vs. TrEMBL
Match: A0A0A0L4H2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127160 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-09
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 1 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60
          MSRLLSEIPHAPNT      F    +    P     P G+WAAAQSAIKADLAYLDRTI
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59

[Close]
BLAST of MELO3C006240T1 vs. NCBI nr
Match: gi|700201520|gb|KGN56653.1| (hypothetical protein Csa_3G127160 [Cucumis sativus])

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-09
Identity = 37/59 (62.71%), Postives = 39/59 (66.10%), Query Frame = 1 

Query: 1  MSRLLSEIPHAPNTNTTLRRFQPVMLNADNPLTEYCPWGEWAAAQSAIKADLAYLDRTI 60
          MSRLLSEIPHAPNT      F    +    P     P G+WAAAQSAIKADLAYLDRTI
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTI 59

The following BLAST results are available for this feature:
BLAST of MELO3C006240T1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4H2_CUCSA1.4e-0962.71Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127160 PE=4 SV=1[more]
BLAST of MELO3C006240T1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201520|gb|KGN56653.1|2.0e-0962.71hypothetical protein Csa_3G127160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
MELO3C006240MELO3C006240gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
MELO3C006240T1MELO3C006240T1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
MELO3C006240T1.cds1MELO3C006240T1.cds1CDS