CSPI03G10050 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G10050
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 8089497 .. 8089766 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAAACACTACACCACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGCAAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATCAATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTCTCTGCTTAGAATGTGTTCGACAAAATGCCTCAAATTAA

mRNA sequence

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAAACACTACACCACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGCAAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATCAATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTCTCTGCTTAGAATGTGTTCGACAAAATGCCTCAAATTAA

Coding sequence (CDS)

ATGAGCCGGCTTCTTTCAGAAATACCGCACGCCCCCAATACGAAACACTACACCACGTCGTTTTCAGCCGGTGATGTTGAACGCCGACAACCCACTGACAGAGTACTGCCCGTGGGCAAATGGGCAGCTGCCCAATCTGCCATTAAAGCCGATCTTGCTTACTTGGATCGCACCATCAATTGTAGAGAAGCATCTGAAAGGGAATTGGATTCTCTACTGTTCTCTGAAACTCTCTGCTTAGAATGTGTTCGACAAAATGCCTCAAATTAA
Homology
[Close]
BLAST of CSPI03G10050 vs. TrEMBL
Match: A0A0A0L4H2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127160 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 4.8e-43
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTIN 60
          MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTIN
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTIN 60

Query: 61 CREASERELDSLLFSETLCLECVRQNASN 90
          CREASERELDSLLFSETLCLECVRQNASN
Sbjct: 61 CREASERELDSLLFSETLCLECVRQNASN 89

[Close]
BLAST of CSPI03G10050 vs. NCBI nr
Match: gi|700201520|gb|KGN56653.1| (hypothetical protein Csa_3G127160 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 6.9e-43
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 1 

Query: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTIN 60
          MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTIN
Sbjct: 1  MSRLLSEIPHAPNTKHYTTSFSAGDVERRQPTDRVLPVGKWAAAQSAIKADLAYLDRTIN 60

Query: 61 CREASERELDSLLFSETLCLECVRQNASN 90
          CREASERELDSLLFSETLCLECVRQNASN
Sbjct: 61 CREASERELDSLLFSETLCLECVRQNASN 89

The following BLAST results are available for this feature:
BLAST of CSPI03G10050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G10050 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4H2_CUCSA4.8e-43100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G127160 PE=4 SV=1[more]
BLAST of CSPI03G10050 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G10050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201520|gb|KGN56653.1|6.9e-43100.00hypothetical protein Csa_3G127160 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G10050.1CSPI03G10050.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G10050Csa3G127160Cucumber (Chinese Long) v2cpicuB120
CSPI03G10050MELO3C006240Melon (DHL92) v3.5.1cpimeB230
CSPI03G10050MELO3C006240.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G10050CsaV3_3G010200Cucumber (Chinese Long) v3cpicucB144
CSPI03G10050CsGy3G010150Cucumber (Gy14) v2cgybcpiB110
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G10050Cucurbita pepo (Zucchini)cpecpiB136
CSPI03G10050Cucurbita pepo (Zucchini)cpecpiB309
CSPI03G10050Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G10050Cucurbita pepo (Zucchini)cpecpiB861
CSPI03G10050Bottle gourd (USVL1VR-Ls)cpilsiB153
CSPI03G10050Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G10050Bottle gourd (USVL1VR-Ls)cpilsiB219
CSPI03G10050Bottle gourd (USVL1VR-Ls)cpilsiB231
CSPI03G10050Melon (DHL92) v3.6.1cpimedB168
CSPI03G10050Cucumber (Gy14) v2cgybcpiB115
CSPI03G10050Cucumber (Gy14) v2cgybcpiB116
CSPI03G10050Cucumber (Gy14) v2cgybcpiB264
CSPI03G10050Silver-seed gourdcarcpiB0261
CSPI03G10050Silver-seed gourdcarcpiB0651
CSPI03G10050Silver-seed gourdcarcpiB0998
CSPI03G10050Silver-seed gourdcarcpiB1113
CSPI03G10050Cucumber (Chinese Long) v3cpicucB150
CSPI03G10050Cucumber (Chinese Long) v3cpicucB151
CSPI03G10050Cucumber (Chinese Long) v3cpicucB178
CSPI03G10050Watermelon (97103) v2cpiwmbB188
CSPI03G10050Watermelon (97103) v2cpiwmbB209
CSPI03G10050Watermelon (97103) v2cpiwmbB234
CSPI03G10050Wax gourdcpiwgoB260
CSPI03G10050Wax gourdcpiwgoB270
CSPI03G10050Wild cucumber (PI 183967)cpicpiB101
CSPI03G10050Wild cucumber (PI 183967)cpicpiB103
CSPI03G10050Wild cucumber (PI 183967)cpicpiB126
CSPI03G10050Cucumber (Gy14) v1cgycpiB383
CSPI03G10050Cucumber (Gy14) v1cgycpiB486
CSPI03G10050Cucumber (Gy14) v1cgycpiB537
CSPI03G10050Cucurbita maxima (Rimu)cmacpiB255
CSPI03G10050Cucurbita maxima (Rimu)cmacpiB361
CSPI03G10050Cucurbita maxima (Rimu)cmacpiB826
CSPI03G10050Cucurbita maxima (Rimu)cmacpiB834
CSPI03G10050Cucurbita maxima (Rimu)cmacpiB910
CSPI03G10050Cucurbita moschata (Rifu)cmocpiB243
CSPI03G10050Cucurbita moschata (Rifu)cmocpiB353
CSPI03G10050Cucurbita moschata (Rifu)cmocpiB814
CSPI03G10050Cucurbita moschata (Rifu)cmocpiB889
CSPI03G10050Cucumber (Chinese Long) v2cpicuB123
CSPI03G10050Cucumber (Chinese Long) v2cpicuB150
CSPI03G10050Melon (DHL92) v3.5.1cpimeB177
CSPI03G10050Melon (DHL92) v3.5.1cpimeB224
CSPI03G10050Watermelon (Charleston Gray)cpiwcgB184
CSPI03G10050Watermelon (Charleston Gray)cpiwcgB226
CSPI03G10050Watermelon (Charleston Gray)cpiwcgB250
CSPI03G10050Watermelon (97103) v1cpiwmB231
CSPI03G10050Watermelon (97103) v1cpiwmB278