MELO3C005384.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C005384.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDNA polymerase delta subunit 4
Locationchr09 : 21101991 .. 21103985 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGCCACATCGAATTAGACCTCCAAAAGCAACACCAAGAACAAATTTGAAATTTGAAATTCCGAACTCGATCGATCGCAGAGAAGGAGCAAAATCAAAGATGGCGTCAACGCGAGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAGCAGTGGAATCTCCAAAGCAAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCAATGCCGTCCAACCGGCTGCTCTCGTTTCTCACGGATCCCTCGACCTTCAAGGTTCATATCTCTTCTTCTACAGTCTTCTCCGTATCTTCACATTCTTGGATATCTGCTTAAGTTGTTGGGTATTGGTTGAGTTTTATGATTGTTGAATTAAAGATTCTCAATGGTTGAATCACCTTTCTCGTGGTTGTGAAGGATTAAGAAATTGTTGGGTTTCAGTCATAATCAAGTTATTCAATTGTTGAATTAAAGATATCTATTGTTTTGGATTCTTTAACTTTTTTAATGTAGTTATGCTCAAAGAAGGGTGAACACTTTAGTCTTACCATCTCACGATGTGTGTTGGACATTTGGATGCTTTGATACTTTTTGGACACTTATAGGATACTTGTTCACACCAAAAATGTGCATTAGACACTAGTTGTGCAAAATTAGTACAAGCCTAACCATTCTGCGTAAAGAACACTCATTAAGTTACTAAATGGACACCTAACAATCTAGGAAAAATATAAGAAATTTTGAGAGCGAAGTACATCAGAGTCATTTTTAGCACATATATGTATAAACTTATTGACTTTTCTAGTTATTATGTATAATTTATAAATCTGCCCTTGCCACGTTTGTGTTGTATTTATGTATCGTATTCGTACCTTCTTCTATAGTGATCGTATTATGGATGCCCAATGTTAGATTTCTTTTAATCTTCGACCAGAAAAATCTTATCTATCAATGTGTTTGGACATATGACTATACTACCATGATATTTGTTAAAAACAAGTGTACCTTTTGCCTAGTCTATTTTAATAATCTGCATTTTGTTTCATTTTGAACATTGATGACTTTTGTATTAGATGATTATGGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCATATGGACCATGCCTCGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAGTCTTGGTCTGAACCCTCCAAAAGACATTGGGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAAACTTCTAAGCTTGGTGTGTTATTTTTGTTTAATGTATGAAGTGTACGCTGTGCTTATGCTTTTGGACAAAATGGTTCAGCCCCTAGCTGAAACGATGATCACTTTTCCTGTGATATGAATGGGCTTAGAATGTTTGCTGATGACAGCTCCCTTAGTTATTTACTTCTTACTTATGTTGAAAACTTATAACAAGTAGTTGTATAGTTAAATTTGGTGATATTTTCCTTTCCTAGTGTTACACTTGAACTTGATATGATGTGTGAATCCGTGACTCAAGACACCTTTCGATTCCCACTAATTGAAGAGGAAGGGATATTTGTGTACATAGTAGCATTTCAAATTTTTGTCAATGTGATAATGGGTGGGATTCCCAAATTTTTGTCAAAGATTTATTGCAGACATTGCGAGATTGTTAATAAGTGAAAGAGTTGAGTTGTGAAACTGATTGAAAATGGAATCTCATTTTTGCTTTTTTGAAAGTGTAGAAGGCAGAGATTGTAGAGGGGAGGGATAATACTCAGAACTAACTGAATTTAACAGGAAGGACGAGGTTTAAATACTATTTGATCGTTGCACTTTTAGTTTTGGTTCATTTTTTCATGCAATTGTAACACTGGAAGTTTGTGAAGGATTTTAGCAGTAAGTGGTGAGGTCAATGAGAAATGGAAGCTTTTAGTTTTGTTGAGTCCGTCCTTTCAAATATGGAGTTCGTTATTAGA

mRNA sequence

AAAGGCCACATCGAATTAGACCTCCAAAAGCAACACCAAGAACAAATTTGAAATTTGAAATTCCGAACTCGATCGATCGCAGAGAAGGAGCAAAATCAAAGATGGCGTCAACGCGAGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAGCAGTGGAATCTCCAAAGCAAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCAATGCCGTCCAACCGGCTGCTCTCGTTTCTCACGGATCCCTCGACCTTCAAGATGATTATGGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCATATGGACCATGCCTCGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAGTCTTGGTCTGAACCCTCCAAAAGACATTGGGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAAACTTCTAAGCTTGGTGTGTTATTTTTGTTTAATGTATGAAGTGTACGCTGTGCTTATGCTTTTGGACAAAATGGTTCAGCCCCTAGCTGAAACGATGATCACTTTTCCTGTGATATGAATGGGCTTAGAATGTTTGCTGATGACAGCTCCCTTAGTTATTTACTTCTTACTTATGTTGAAAACTTATAACAAGTAGTTGTATAGTTAAATTTGGTGATATTTTCCTTTCCTAGTGTTACACTTGAACTTGATATGATGTGTGAATCCGTGACTCAAGACACCTTTCGATTCCCACTAATTGAAGAGGAAGGGATATTTGTGTACATAGTAGCATTTCAAATTTTTGTCAATGTGATAATGGGTGGGATTCCCAAATTTTTGTCAAAGATTTATTGCAGACATTGCGAGATTGTTAATAAGTGAAAGAGTTGAGTTGTGAAACTGATTGAAAATGGAATCTCATTTTTGCTTTTTTGAAAGTGTAGAAGGCAGAGATTGTAGAGGGGAGGGATAATACTCAGAACTAACTGAATTTAACAGGAAGGACGAGGTTTAAATACTATTTGATCGTTGCACTTTTAGTTTTGGTTCATTTTTTCATGCAATTGTAACACTGGAAGTTTGTGAAGGATTTTAGCAGTAAGTGGTGAGGTCAATGAGAAATGGAAGCTTTTAGTTTTGTTGAGTCCGTCCTTTCAAATATGGAGTTCGTTATTAGA

Coding sequence (CDS)

ATGGCGTCAACGCGAGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAGCAGTGGAATCTCCAAAGCAAAGGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCAATGCCGTCCAACCGGCTGCTCTCGTTTCTCACGGATCCCTCGACCTTCAAGATGATTATGGCGAGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCATATGGACCATGCCTCGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAGTCTTGGTCTGAACCCTCCAAAAGACATTGGGACACTCTTAAAGGCTGGAAAAGTGCAGTTGGAGTGCTTATGGGATTCTCGAGTTTAA

Protein sequence

MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECLWDSRV
Homology
[Close]
BLAST of MELO3C005384.2 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL
Sbjct: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WDSRV 126
           WDSRV
Sbjct: 121 WDSRV 125

[Close]
BLAST of MELO3C005384.2 vs. NCBI nr
Match: XP_004143634.1 (PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_5G172885 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 7.6e-60
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGS+AVQPAALVSHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           QDDYG SEN LRQFDMN AYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL
Sbjct: 61  QDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WDSRV 126
           WDSRV
Sbjct: 121 WDSRV 125

[Close]
BLAST of MELO3C005384.2 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 200.3 bits (508), Expect = 3.9e-48
Identity = 101/125 (80.80%), Postives = 111/125 (88.80%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSSRKTKS ANSA+L S+ VQPAAL+SHGSLDL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSRKTKSRANSATLDSDGVQPAALISHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           +DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+I TLLK GKVQLECL
Sbjct: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECL 120

Query: 121 WDSRV 126
           W SR+
Sbjct: 121 WASRI 123

[Close]
BLAST of MELO3C005384.2 vs. NCBI nr
Match: XP_023532644.1 (uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 100/125 (80.00%), Postives = 110/125 (88.00%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSSRKTKS ANSA+L S+ VQPA L+SHGSLDL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSRKTKSRANSATLDSDGVQPAVLISHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           +DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+I TLLK GKVQLECL
Sbjct: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELAGKLGLNPPKEIETLLKGGKVQLECL 120

Query: 121 WDSRV 126
           W SR+
Sbjct: 121 WASRI 123

[Close]
BLAST of MELO3C005384.2 vs. NCBI nr
Match: XP_022995740.1 (uncharacterized protein LOC111491182 [Cucurbita maxima])

HSP 1 Score: 195.7 bits (496), Expect = 9.6e-47
Identity = 99/125 (79.20%), Postives = 110/125 (88.00%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MAS RGG+KDFYKQRK+SG+S  K SKPSS KTKS A+SA+L S+ VQPAAL+SHGSLDL
Sbjct: 1   MASARGGMKDFYKQRKNSGVS--KVSKPSSGKTKSRASSATLDSDGVQPAALISHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           +DDYGESEN+LRQFDMNMAYGPCLGMTRM RWE A  LGLNPPK+I TLLK GKVQLECL
Sbjct: 61  RDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLECL 120

Query: 121 WDSRV 126
           W SR+
Sbjct: 121 WASRI 123

[Close]
BLAST of MELO3C005384.2 vs. TAIR10
Match: AT1G09815.1 (polymerase delta 4)

HSP 1 Score: 151.0 bits (380), Expect = 4.9e-37
Identity = 76/125 (60.80%), Postives = 92/125 (73.60%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MA+T   LK FYKQ KS+       SKPSSRK  +P ++A+ GS+  QPAAL+SHGS+DL
Sbjct: 1   MATTAKNLKGFYKQTKSNITGGISKSKPSSRKV-APKHAAAQGSDVTQPAALISHGSVDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
            +DY + E MLRQFDMN+ YGPCLGMTR+ RWERA  LG+NPP +I  LLK GKVQ +CL
Sbjct: 61  NEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKVQQDCL 120

Query: 121 WDSRV 126
           W  RV
Sbjct: 121 WQGRV 124

[Close]
BLAST of MELO3C005384.2 vs. Swiss-Prot
Match: sp|Q9HCU8|DPOD4_HUMAN (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 0 

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKA--GKVQLE 120
           +D+      +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +LK   G  + +
Sbjct: 39  RDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLKTHPGDPRFQ 98

Query: 121 C-LW 122
           C LW
Sbjct: 99  CSLW 102

[Close]
BLAST of MELO3C005384.2 vs. Swiss-Prot
Match: sp|Q3T0X9|DPOD4_BOVIN (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 33/84 (39.29%), Postives = 48/84 (57.14%), Query Frame = 0 

Query: 41  SLGSNAVQPAALVSHGSLDLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGL 100
           S G +  + A  +    L L  D  E E +LRQFD+   YGPC G+TR+ RW RA  +GL
Sbjct: 20  SAGHSKGELAPDLGEEPLPLSVDEEELE-LLRQFDLAWQYGPCTGITRLQRWHRAEQMGL 79

Query: 101 NPPKDIGTLLKA--GKVQLEC-LW 122
            PP ++  +L++  G  + +C LW
Sbjct: 80  KPPPEVHQVLQSHPGDPRFQCSLW 102

[Close]
BLAST of MELO3C005384.2 vs. Swiss-Prot
Match: sp|Q9CWP8|DPOD4_MOUSE (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-07
Identity = 23/43 (53.49%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 70  MLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKA 113
           +LRQFD+   YGPC G+TR+ RW RA  +GL PP ++  +LKA
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLKA 90

[Close]
BLAST of MELO3C005384.2 vs. Swiss-Prot
Match: sp|O59835|DPOD4_SCHPO (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0 

Query: 68  ENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLL 111
           E +L  FD    YGP LGMTRM RW+RA +  LNPP+ +G +L
Sbjct: 94  EFILHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKIL 136

[Close]
BLAST of MELO3C005384.2 vs. TrEMBL
Match: tr|A0A1S3CT23|A0A1S3CT23_CUCME (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.3e-63
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL
Sbjct: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WDSRV 126
           WDSRV
Sbjct: 121 WDSRV 125

[Close]
BLAST of MELO3C005384.2 vs. TrEMBL
Match: tr|A0A0A0KND6|A0A0A0KND6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 5.0e-60
Identity = 121/125 (96.80%), Postives = 122/125 (97.60%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGS+AVQPAALVSHGSLDL
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSDAVQPAALVSHGSLDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           QDDYG SEN LRQFDMN AYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL
Sbjct: 61  QDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120

Query: 121 WDSRV 126
           WDSRV
Sbjct: 121 WDSRV 125

[Close]
BLAST of MELO3C005384.2 vs. TrEMBL
Match: tr|A0A068VD12|A0A068VD12_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00007402001 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38
Identity = 82/126 (65.08%), Postives = 103/126 (81.75%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQ-RKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLD 60
           MA+++  +K F+KQ +KS GI+KAKA   S++K+ SP  SA+ GS+  QPAAL+SHGS D
Sbjct: 1   MATSKSDMKGFFKQKKKSGGITKAKAKSSSTKKSLSPKRSATYGSDITQPAALISHGSPD 60

Query: 61  LQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLEC 120
           ++DDY E E +LRQFDMNMAYGPCLGM+R+ARWERA SLG+NPP+DIG LLKAGKV  EC
Sbjct: 61  IEDDYDEKEEVLRQFDMNMAYGPCLGMSRLARWERAKSLGMNPPEDIGHLLKAGKVGAEC 120

Query: 121 LWDSRV 126
           LW+ RV
Sbjct: 121 LWEGRV 126

[Close]
BLAST of MELO3C005384.2 vs. TrEMBL
Match: tr|A0A2P4JN32|A0A2P4JN32_QUESU (Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_79408 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.0e-38
Identity = 81/125 (64.80%), Postives = 103/125 (82.40%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MA+T G +K+FY+QRK SG+SK   SK S++  KS  N+A+ GS+  QP+AL+SHGS DL
Sbjct: 1   MATTSGNIKEFYRQRKKSGVSKPSNSKISTK--KSLKNAATFGSDITQPSALISHGSPDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           +DDY E+E+MLR+FDMNMAYGPCLGMTR+ARWERA SLGLNPP++I  LLKAGK + +CL
Sbjct: 61  KDDYDENEDMLRKFDMNMAYGPCLGMTRLARWERARSLGLNPPEEIEGLLKAGKARSDCL 120

Query: 121 WDSRV 126
           WD R+
Sbjct: 121 WDGRI 123

[Close]
BLAST of MELO3C005384.2 vs. TrEMBL
Match: tr|A0A2P4IN70|A0A2P4IN70_QUESU (Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_73220 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-37
Identity = 80/125 (64.00%), Postives = 103/125 (82.40%), Query Frame = 0 

Query: 1   MASTRGGLKDFYKQRKSSGISKAKASKPSSRKTKSPANSASLGSNAVQPAALVSHGSLDL 60
           MA+T G +K+FY+QRK SG+SK   SK S++  KS  N+A+ GS+  QP+AL+SHGS DL
Sbjct: 1   MATTSGNIKEFYRQRKKSGVSKPSNSKISTK--KSLKNAATFGSDITQPSALISHGSPDL 60

Query: 61  QDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLECL 120
           +DD+ E+E+MLR+FDMNMAYGPCLGMTR+ARWERA SLGLNPP++I  LLKAGK + +CL
Sbjct: 61  KDDHDENEDMLRKFDMNMAYGPCLGMTRLARWERARSLGLNPPEEIEGLLKAGKARSDCL 120

Query: 121 WDSRV 126
           WD R+
Sbjct: 121 WDGRI 123

The following BLAST results are available for this feature:
BLAST of MELO3C005384.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008467236.11.2e-62100.00PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo][more]
XP_004143634.17.6e-6096.80PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hy... [more]
XP_022957680.13.9e-4880.80uncharacterized protein LOC111459143 [Cucurbita moschata][more]
XP_023532644.11.1e-4780.00uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo][more]
XP_022995740.19.6e-4779.20uncharacterized protein LOC111491182 [Cucurbita maxima][more]
BLAST of MELO3C005384.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09815.14.9e-3760.80polymerase delta 4[more]
BLAST of MELO3C005384.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9HCU8|DPOD4_HUMAN1.0e-0742.19DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1[more]
sp|Q3T0X9|DPOD4_BOVIN1.3e-0739.29DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1[more]
sp|Q9CWP8|DPOD4_MOUSE1.7e-0753.49DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1[more]
sp|O59835|DPOD4_SCHPO1.5e-0653.49DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
BLAST of MELO3C005384.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CT23|A0A1S3CT23_CUCME8.3e-63100.00DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1[more]
tr|A0A0A0KND6|A0A0A0KND6_CUCSA5.0e-6096.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1[more]
tr|A0A068VD12|A0A068VD12_COFCA2.4e-3865.08Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00007402001 PE=4 ... [more]
tr|A0A2P4JN32|A0A2P4JN32_QUESU7.0e-3864.80Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_79408 PE=4 SV=... [more]
tr|A0A2P4IN70|A0A2P4IN70_QUESU2.7e-3764.00Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_73220 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR007218DNA_pol_delta_4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0000731 DNA synthesis involved in DNA repair
cellular_component GO:0005634 nucleus
cellular_component GO:0043625 delta DNA polymerase complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C005384.2.1MELO3C005384.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007218DNA polymerase delta, subunit 4PFAMPF04081DNA_pol_delta_4coord: 61..111
e-value: 1.1E-19
score: 71.0
IPR007218DNA polymerase delta, subunit 4PANTHERPTHR14303DNA POLYMERASE DELTA SUBUNIT 4coord: 5..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..46
NoneNo IPR availablePANTHERPTHR14303:SF6SUBFAMILY NOT NAMEDcoord: 5..112

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C005384.2CSPI05G08300Wild cucumber (PI 183967)cpimedB341
MELO3C005384.2Cucsa.115400Cucumber (Gy14) v1cgymedB166
MELO3C005384.2CmaCh02G010330Cucurbita maxima (Rimu)cmamedB610
MELO3C005384.2CmoCh02G010490Cucurbita moschata (Rifu)cmomedB597
MELO3C005384.2Lsi09G005780Bottle gourd (USVL1VR-Ls)lsimedB013
MELO3C005384.2Cp4.1LG05g06850Cucurbita pepo (Zucchini)cpemedB775
MELO3C005384.2CsGy5G005690Cucumber (Gy14) v2cgybmedB301
MELO3C005384.2Cla002346Watermelon (97103) v1medwmB030
MELO3C005384.2ClCG01G005450Watermelon (Charleston Gray)medwcgB017
MELO3C005384.2Cla97C01G005670Watermelon (97103) v2medwmbB007
MELO3C005384.2Bhi12G000497Wax gourdmedwgoB004
MELO3C005384.2Carg08442Silver-seed gourdcarmedB0718
MELO3C005384.2CsaV3_5G005690Cucumber (Chinese Long) v3cucmedB352
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C005384.2Cucurbita maxima (Rimu)cmamedB291
MELO3C005384.2Cucurbita moschata (Rifu)cmomedB277
MELO3C005384.2Cucurbita moschata (Rifu)cmomedB394
MELO3C005384.2Cucurbita pepo (Zucchini)cpemedB019
MELO3C005384.2Cucurbita pepo (Zucchini)cpemedB174
MELO3C005384.2Wild cucumber (PI 183967)cpimedB337
MELO3C005384.2Cucumber (Chinese Long) v2cumedB335
MELO3C005384.2Cucumber (Chinese Long) v2cumedB339
MELO3C005384.2Melon (DHL92) v3.6.1medmedB004
MELO3C005384.2Bottle gourd (USVL1VR-Ls)lsimedB356
MELO3C005384.2Watermelon (Charleston Gray)medwcgB029
MELO3C005384.2Watermelon (97103) v1medwmB021
MELO3C005384.2Silver-seed gourdcarmedB0746