Cla97C01G005670 (gene) Watermelon (97103) v2

Overview
NameCla97C01G005670
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionDNA polymerase delta subunit 4
LocationCla97Chr01 : 5457112 .. 5458607 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAACAGTGGAATCTCCAAGGCCAACAGCAAAGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCCTTTCTCACGGATCCTTCGACCTTCAAGGTTCATATCTCTTCTTTTCAAGTCTTCTCCGTTTCTTTACATTCCTGGATGTTTGCTTTCTTCGTTAGGTCTCTTGAAACTTCAATTACCGTTGGTTTTGGTTCGTTCATTAACGTGGTATGAATGGCCTGTGGACTTATGCCTCCTGATTCTGAAGGATTAAGCATGTTTCCGTTGAGAAGCTGTTGGATATTGGTTGCAACTAAGTTCTATAATAGTTGAATTAAAGATTCTCAATGTTTGGATCACTTTTGACGATTTCACTGAAAAATGTAGTCAATTTTTTATGCCTCGTGATTGTGAAGGATCAAGCATGTTGCAGTCAAGAAGTTGTTATCAGTTACAATCAATTTATTCCATAGTTGAATTAAGGATATCTATTGTTTGGATTTCTTTAACTTTCTTACTGTCAAATGTTATTAAATTAATACGTTTAGACTTATGCCTCAGAGTTATGCACAAAGAAGCTTGAACACTTTAGTCTTATTGTGTTTGTGTCTCATACGTGTTGGTCATTTGGATACTTTGAAACTTGTTGGACACATATCGGATACTTGTCATGATTAACACAATAAATATGCATTAAACACGACTTATACAAAATATAGGTCTAATAAGAAGACACAGTAATCTAGGACAAGTATAAGAAACTTCAAGAGCGAATTACATTAAACTTAGTTTTTAGCATATAGATGCATGAACTTATTGGCTGTTTTAGTATTAAATTATATATATTTTTAAAATTGTGTCCTTTCCGCATCCATCTTACAACTTTAGAAAATGATGTGTCACCATGTCTATGTTATGTTGTGTTGTATCTATGTTTCATATTCGTATTCTACTTCTTTTATTAGCAAGGATTATGCATGTTGGAGTAAAAAAGTTGTGGGATACCAGTTATAATTAGGTTCTATAGTAGTGGAATTATGGATGCCAAATGCTAGATTTCTTTTAATTTTCGACTGGAAAAATCTTATCTAACAATGTGTCTGGACGTCAGATATGATGTGGCTATAATATCTGGATATTTTTGAAAAAAGGGTGTACCTTTTGCTTAATCTATTTCAATAATCTGCATTTTGTTCCATTTTGATCATTGAATTTTGTTTTAGATGATTATGGAGCGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGTCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAAACTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAAGCTGGAAACGTGCAGTTGGAGTGCTTGTGGGATTCTCGAGTTTAA

mRNA sequence

ATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAACAGTGGAATCTCCAAGGCCAACAGCAAAGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCCTTTCTCACGGATCCTTCGACCTTCAAGATGATTATGGAGCGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGTCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAAACTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAAGCTGGAAACGTGCAGTTGGAGTGCTTGTGGGATTCTCGAGTTTAA

Coding sequence (CDS)

ATGGCATCAGCGCGTGGAGGGTTGAAAGATTTCTACAAGCAAAGGAAAAACAGTGGAATCTCCAAGGCCAACAGCAAAGCTTCAAAGCCCTCTTCTAGGAAAACCAAATCTCCGGCCAACTCTGCATCTTTGGGCTCCGATGCCGTCCAACCGGCTGCTCTCCTTTCTCACGGATCCTTCGACCTTCAAGATGATTATGGAGCGTCTGAGAATATGCTGAGGCAATTTGATATGAACATGGCCTATGGACCTTGTCTTGGAATGACCAGAATGGCACGGTGGGAGCGTGCCTGTAAACTTGGTCTGAACCCTCCAAAAGACATTGAGACACTCTTAAAAGCTGGAAACGTGCAGTTGGAGTGCTTGTGGGATTCTCGAGTTTAA

Protein sequence

MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSFDLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLECLWDSRV
Homology
[Close]
BLAST of Cla97C01G005670 vs. NCBI nr
Match: XP_008467236.1 (PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo])

HSP 1 Score: 226.9 bits (577), Expect = 3.9e-56
Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRKTKSPANSASLGS+AVQPAAL+SHGS 
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DLQDDYG SENMLRQFDMNMAYGPCLGMTRMARWERAC LGLNPPKDI TLLKAG VQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]
BLAST of Cla97C01G005670 vs. NCBI nr
Match: XP_004143634.1 (PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hypothetical protein Csa_5G172885 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 2.0e-55
Identity = 115/127 (90.55%), Postives = 117/127 (92.13%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRKTKSPANSASLGSDAVQPAAL+SHGS 
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DLQDDYG SEN LRQFDMN AYGPCLGMTRMARWERAC LGLNPPKDI TLLKAG VQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]
BLAST of Cla97C01G005670 vs. NCBI nr
Match: XP_022957680.1 (uncharacterized protein LOC111459143 [Cucurbita moschata])

HSP 1 Score: 203.0 bits (515), Expect = 6.1e-49
Identity = 103/127 (81.10%), Postives = 111/127 (87.40%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MASARGG+KDFYKQRKNSG+    SK SKPSSRKTKS ANSA+L SD VQPAAL+SHGS 
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSRKTKSRANSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DL+DDYG SEN+LRQFDMNMAYGPCLGMTRM RWE A KLGLNPPK+IETLLK G VQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]
BLAST of Cla97C01G005670 vs. NCBI nr
Match: XP_023532644.1 (uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 102/127 (80.31%), Postives = 110/127 (86.61%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MASARGG+KDFYKQRKNSG+    SK SKPSSRKTKS ANSA+L SD VQPA L+SHGS 
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSRKTKSRANSATLDSDGVQPAVLISHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DL+DDYG SEN+LRQFDMNMAYGPCLGMTRM RWE A KLGLNPPK+IETLLK G VQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELAGKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]
BLAST of Cla97C01G005670 vs. NCBI nr
Match: XP_022995740.1 (uncharacterized protein LOC111491182 [Cucurbita maxima])

HSP 1 Score: 198.4 bits (503), Expect = 1.5e-47
Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MASARGG+KDFYKQRKNSG+    SK SKPSS KTKS A+SA+L SD VQPAAL+SHGS 
Sbjct: 1   MASARGGMKDFYKQRKNSGV----SKVSKPSSGKTKSRASSATLDSDGVQPAALISHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DL+DDYG SEN+LRQFDMNMAYGPCLGMTRM RWE A KLGLNPPK+IETLLK G VQLE
Sbjct: 61  DLRDDYGESENILRQFDMNMAYGPCLGMTRMERWELARKLGLNPPKEIETLLKGGKVQLE 120

Query: 121 CLWDSRV 128
           CLW SR+
Sbjct: 121 CLWASRI 123

[Close]
BLAST of Cla97C01G005670 vs. TrEMBL
Match: tr|A0A1S3CT23|A0A1S3CT23_CUCME (DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.6e-56
Identity = 116/127 (91.34%), Postives = 119/127 (93.70%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRKTKSPANSASLGS+AVQPAAL+SHGS 
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSNAVQPAALVSHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DLQDDYG SENMLRQFDMNMAYGPCLGMTRMARWERAC LGLNPPKDI TLLKAG VQLE
Sbjct: 61  DLQDDYGESENMLRQFDMNMAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]
BLAST of Cla97C01G005670 vs. TrEMBL
Match: tr|A0A0A0KND6|A0A0A0KND6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.3e-55
Identity = 115/127 (90.55%), Postives = 117/127 (92.13%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGSF 60
           MAS RGGLKDFYKQRK+SGISKA  KASKPSSRKTKSPANSASLGSDAVQPAAL+SHGS 
Sbjct: 1   MASTRGGLKDFYKQRKSSGISKA--KASKPSSRKTKSPANSASLGSDAVQPAALVSHGSL 60

Query: 61  DLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQLE 120
           DLQDDYG SEN LRQFDMN AYGPCLGMTRMARWERAC LGLNPPKDI TLLKAG VQLE
Sbjct: 61  DLQDDYGVSENTLRQFDMNTAYGPCLGMTRMARWERACSLGLNPPKDIGTLLKAGKVQLE 120

Query: 121 CLWDSRV 128
           CLWDSRV
Sbjct: 121 CLWDSRV 125

[Close]
BLAST of Cla97C01G005670 vs. TrEMBL
Match: tr|A0A2P4JN32|A0A2P4JN32_QUESU (Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_79408 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.7e-36
Identity = 80/128 (62.50%), Postives = 100/128 (78.12%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISK-ANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGS 60
           MA+  G +K+FY+QRK SG+SK +NSK S   S K     N+A+ GSD  QP+AL+SHGS
Sbjct: 1   MATTSGNIKEFYRQRKKSGVSKPSNSKISTKKSLK-----NAATFGSDITQPSALISHGS 60

Query: 61  FDLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQL 120
            DL+DDY  +E+MLR+FDMNMAYGPCLGMTR+ARWERA  LGLNPP++IE LLKAG  + 
Sbjct: 61  PDLKDDYDENEDMLRKFDMNMAYGPCLGMTRLARWERARSLGLNPPEEIEGLLKAGKARS 120

Query: 121 ECLWDSRV 128
           +CLWD R+
Sbjct: 121 DCLWDGRI 123

[Close]
BLAST of Cla97C01G005670 vs. TrEMBL
Match: tr|A0A2P4IN70|A0A2P4IN70_QUESU (Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_73220 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-35
Identity = 79/128 (61.72%), Postives = 100/128 (78.12%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNSGISK-ANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHGS 60
           MA+  G +K+FY+QRK SG+SK +NSK S   S K     N+A+ GSD  QP+AL+SHGS
Sbjct: 1   MATTSGNIKEFYRQRKKSGVSKPSNSKISTKKSLK-----NAATFGSDITQPSALISHGS 60

Query: 61  FDLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQL 120
            DL+DD+  +E+MLR+FDMNMAYGPCLGMTR+ARWERA  LGLNPP++IE LLKAG  + 
Sbjct: 61  PDLKDDHDENEDMLRKFDMNMAYGPCLGMTRLARWERARSLGLNPPEEIEGLLKAGKARS 120

Query: 121 ECLWDSRV 128
           +CLWD R+
Sbjct: 121 DCLWDGRI 123

[Close]
BLAST of Cla97C01G005670 vs. TrEMBL
Match: tr|A0A067L638|A0A067L638_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02579 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 4.3e-35
Identity = 78/129 (60.47%), Postives = 100/129 (77.52%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNS--GISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSHG 60
           MA+    +K FY+QRK++  GI+K+ SK+ K      KSP ++A++ SD  QP AL+SHG
Sbjct: 1   MATPTNDMKSFYRQRKSNRGGITKSTSKSKK------KSPKHAATISSDITQPKALISHG 60

Query: 61  SFDLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNVQ 120
           + DLQDDY   E++LRQFDMNMAYGPCLGMTR+ARWERA +LG+NPPK+IE +LK+G V 
Sbjct: 61  APDLQDDYDKQEDVLRQFDMNMAYGPCLGMTRLARWERAQRLGMNPPKEIEGMLKSGKVS 120

Query: 121 LECLWDSRV 128
           LECLWD RV
Sbjct: 121 LECLWDGRV 123

[Close]
BLAST of Cla97C01G005670 vs. Swiss-Prot
Match: sp|Q9HCU8|DPOD4_HUMAN (DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-08
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 0 

Query: 63  QDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKA--GNVQLE 122
           +D+  A   +LRQFD+   YGPC G+TR+ RW RA ++GL PP ++  +LK   G+ + +
Sbjct: 39  RDEEEAELELLRQFDLAWQYGPCTGITRLQRWCRAKQMGLEPPPEVWQVLKTHPGDPRFQ 98

Query: 123 C-LW 124
           C LW
Sbjct: 99  CSLW 102

[Close]
BLAST of Cla97C01G005670 vs. Swiss-Prot
Match: sp|Q3T0X9|DPOD4_BOVIN (DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.6e-08
Identity = 25/55 (45.45%), Postives = 39/55 (70.91%), Query Frame = 0 

Query: 72  MLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKA--GNVQLEC-LW 124
           +LRQFD+   YGPC G+TR+ RW RA ++GL PP ++  +L++  G+ + +C LW
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWHRAEQMGLKPPPEVHQVLQSHPGDPRFQCSLW 102

[Close]
BLAST of Cla97C01G005670 vs. Swiss-Prot
Match: sp|Q9CWP8|DPOD4_MOUSE (DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07
Identity = 23/43 (53.49%), Postives = 32/43 (74.42%), Query Frame = 0 

Query: 72  MLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKA 115
           +LRQFD+   YGPC G+TR+ RW RA ++GL PP ++  +LKA
Sbjct: 48  LLRQFDLAWQYGPCTGITRLQRWSRAEQMGLKPPLEVYQVLKA 90

[Close]
BLAST of Cla97C01G005670 vs. Swiss-Prot
Match: sp|O59835|DPOD4_SCHPO (DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cdm1 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.7e-05
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 0 

Query: 70  ENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLL 113
           E +L  FD    YGP LGMTRM RW+RA    LNPP+ +  +L
Sbjct: 94  EFILHHFDTTARYGPYLGMTRMQRWKRAKNFNLNPPETVGKIL 136

[Close]
BLAST of Cla97C01G005670 vs. TAIR10
Match: AT1G09815.1 (polymerase delta 4)

HSP 1 Score: 149.4 bits (376), Expect = 1.5e-36
Identity = 79/130 (60.77%), Postives = 94/130 (72.31%), Query Frame = 0 

Query: 1   MASARGGLKDFYKQRKNS---GISKANSKASKPSSRKTKSPANSASLGSDAVQPAALLSH 60
           MA+    LK FYKQ K++   GISK     SKPSSRK  +P ++A+ GSD  QPAAL+SH
Sbjct: 1   MATTAKNLKGFYKQTKSNITGGISK-----SKPSSRKV-APKHAAAQGSDVTQPAALISH 60

Query: 61  GSFDLQDDYGASENMLRQFDMNMAYGPCLGMTRMARWERACKLGLNPPKDIETLLKAGNV 120
           GS DL +DY   E MLRQFDMN+ YGPCLGMTR+ RWERA +LG+NPP +IE LLK G V
Sbjct: 61  GSVDLNEDYDKEEEMLRQFDMNITYGPCLGMTRLDRWERAVRLGMNPPNEIEKLLKTGKV 120

Query: 121 QLECLWDSRV 128
           Q +CLW  RV
Sbjct: 121 QQDCLWQGRV 124

The following BLAST results are available for this feature:
BLAST of Cla97C01G005670 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008467236.13.9e-5691.34PREDICTED: DNA polymerase delta subunit 4 [Cucumis melo][more]
XP_004143634.12.0e-5590.55PREDICTED: uncharacterized protein LOC101209940 [Cucumis sativus] >KGN50409.1 hy... [more]
XP_022957680.16.1e-4981.10uncharacterized protein LOC111459143 [Cucurbita moschata][more]
XP_023532644.11.8e-4880.31uncharacterized protein LOC111794744 [Cucurbita pepo subsp. pepo][more]
XP_022995740.11.5e-4779.53uncharacterized protein LOC111491182 [Cucurbita maxima][more]
BLAST of Cla97C01G005670 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CT23|A0A1S3CT23_CUCME2.6e-5691.34DNA polymerase delta subunit 4 OS=Cucumis melo OX=3656 GN=LOC103504636 PE=4 SV=1[more]
tr|A0A0A0KND6|A0A0A0KND6_CUCSA1.3e-5590.55Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172885 PE=4 SV=1[more]
tr|A0A2P4JN32|A0A2P4JN32_QUESU6.7e-3662.50Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_79408 PE=4 SV=... [more]
tr|A0A2P4IN70|A0A2P4IN70_QUESU2.5e-3561.72Dna polymerase delta subunit 4 OS=Quercus suber OX=58331 GN=CFP56_73220 PE=4 SV=... [more]
tr|A0A067L638|A0A067L638_JATCU4.3e-3560.47Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02579 PE=4 SV=1[more]
BLAST of Cla97C01G005670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9HCU8|DPOD4_HUMAN1.6e-0843.75DNA polymerase delta subunit 4 OS=Homo sapiens OX=9606 GN=POLD4 PE=1 SV=1[more]
sp|Q3T0X9|DPOD4_BOVIN3.6e-0845.45DNA polymerase delta subunit 4 OS=Bos taurus OX=9913 GN=POLD4 PE=1 SV=1[more]
sp|Q9CWP8|DPOD4_MOUSE1.4e-0753.49DNA polymerase delta subunit 4 OS=Mus musculus OX=10090 GN=Pold4 PE=1 SV=1[more]
sp|O59835|DPOD4_SCHPO1.7e-0551.16DNA polymerase delta subunit 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 2... [more]
BLAST of Cla97C01G005670 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09815.11.5e-3660.77polymerase delta 4[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: INTERPRO
TermDefinition
IPR007218DNA_pol_delta_4
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0000731 DNA synthesis involved in DNA repair
biological_process GO:0071897 DNA biosynthetic process
cellular_component GO:0005634 nucleus
cellular_component GO:0043625 delta DNA polymerase complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0003887 DNA-directed DNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G005670.1Cla97C01G005670.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007218DNA polymerase delta, subunit 4PFAMPF04081DNA_pol_delta_4coord: 63..113
e-value: 3.3E-20
score: 72.7
IPR007218DNA polymerase delta, subunit 4PANTHERPTHR14303DNA POLYMERASE DELTA SUBUNIT 4coord: 4..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availablePANTHERPTHR14303:SF6SUBFAMILY NOT NAMEDcoord: 4..123

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G005670Cla002346Watermelon (97103) v1wmwmbB238
Cla97C01G005670MELO3C005384Melon (DHL92) v3.5.1mewmbB009
Cla97C01G005670ClCG01G005450Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G005670CSPI05G08300Wild cucumber (PI 183967)cpiwmbB349
Cla97C01G005670Cucsa.115400Cucumber (Gy14) v1cgywmbB166
Cla97C01G005670CmaCh02G010330Cucurbita maxima (Rimu)cmawmbB601
Cla97C01G005670CmoCh02G010490Cucurbita moschata (Rifu)cmowmbB576
Cla97C01G005670Lsi09G005780Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G005670CsGy5G005690Cucumber (Gy14) v2cgybwmbB319
Cla97C01G005670MELO3C005384.2Melon (DHL92) v3.6.1medwmbB007
Cla97C01G005670Carg08442Silver-seed gourdcarwmbB0741
Cla97C01G005670CsaV3_5G005690Cucumber (Chinese Long) v3cucwmbB351
Cla97C01G005670Bhi12G000497Wax gourdwgowmbB064
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G005670Silver-seed gourdcarwmbB0774
Cla97C01G005670Cucurbita maxima (Rimu)cmawmbB285
Cla97C01G005670Cucurbita moschata (Rifu)cmowmbB267
Cla97C01G005670Cucumber (Chinese Long) v2cuwmbB336