MELO3C005192 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C005192
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	50S ribosomal protein L7Ae
Location	chr9 : 17197485 .. 17201025 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAACAGTGCTTTCGTTTAATCCTTTGTTTGTAGATTCTCTACATATTTTGAATTCTACAGTTGCAATAATACTTCACCAAAATTTCAAACAAAGCCTCGGGTTGGCAGTGCTACTTCGTCATCGTCCCGGTTTCACTATGGTTACTTCCAATCGGAGAACGCCGCCGTTATTTCTTTCCAGACTTTGAAACTACACTTTCCACCCAAGTTTTCACTAATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGAGTAAGCAGGATTTCCTTTCCTTTCTTTTCTATTCCATTTTCTTACCTTTATGTTTTTCCCTAATTTGTATTGGAATACGTTTTTCCGAATTTGATTAAAGCAGTTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGGTAAACGGTATTTAATTTGTCTAATAATGCACTTCAACAAACCCACCACTTACCCATCTCCTGTTGTTACAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGGTTTCGTATTTTCAACGTCTTTAGTTTCTCTTTTCCATGTCATGTCGATAATGTACTTTTGTTATTAGTTATAAGCTACTTATGTTGAGTGATGGGATTTGTTTTAGAAACAGTTTGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGTAGTCTACTCGGTTATTTATGTTGGGCAATGCTATCTTGGGTTTAGACTCGTAAGTGTTACTTTACTGGCTTTTTTAGTTTTGTGTCAATCTCATGTGTGTGTTTGTTTTATTATGATATATTAATTAAATTTACCTTCACCTACTGACTTAAGCTTTTGTGTCAATTGGTGATGTAAGATTGATCTAAACAGGTTGGTTCAAGAAGTCTTGTGTTCAAAACTTGTGTTGTTTCCTTCCCAATTAACATTATGTTAGATACCTAGATTAGTACCATGGGTTTATCTTGTGTAAGGGTAATTAGATTAGTCTAGGGTTAGGGGTTTAAGGGTAATTAGTTACTTAGGGAGTTACTAGTAATTATTGTGCAAGTATGGTTACTAGTAGTTATTATGTAAGTGTGGTTACTAGGGTGGTTACATCTTGTTATAAATGGAGGGAGGGTAAGTGAGAGAGGGAGATTATTCTGCGGAGTGATTTAGGGTTTAGGTGATAGTACTCAAGAGAGAGGTTCCAAGTACCTAATACTTGGGTTTATCTTGTATTTTTTTATAGTCCATTATAATAAATTAAGATCTTGTTCTTGTTAGCAAGTGTTCTAACACATTCGTTTTCACTTGTTGAGCCTTCTTCATATTTCAAGCCCACAAGTGAGAGAGAATGGAGTGTCATGGTATATAATAAAATTCATCGTCACCCATCAATTTAAACTTTTAAGTCAATCAGTAATTTAAGACACGAGAAGAGACAACAAGTTTAAAACACGAGCTACATTTGGTGTTTCCATGAGCTTTGGTTGTGATAAGCTGATTTCCTAAAACTTCCTAAGTCTCTTATTATTTTCTTTGTCGTCAAATTTTATCAACGAAATCCGTAGTGTAGTTACACAATTACATGCCTTCTTGGGGATTATGCTATTTGATTGGTAGAAGGCCATTAGTTGTACTTGGCCACAGTAGAAAACTTATACAAGAATGAGAATGGCCCATTGTTCATGTATCCTACAGAGTGTTGTTTGTTGGTTCATGCATCCTTCAGACATTTGGTCCTCAGTGAGATTCCATGCTTTTCTTTAGGCAAAGTTCTTTTGTAATTATTCCCTTGGTAATATTTTGCTAATTTGGAAGCCTTTCTTGTAGTAGGCTTGCTTTTGGTTGGCTTGTTTTTTCTTCATTTCTTGTATACCCTTGTATTCTTTCCTTCTTTCTCTATGAAAGTTGTCTTTTCATCGAAAAGTTGTATCCTACAGAGTGTTGTTTGTTTGTGAAGTATCTTGTCTCAATGCTGGGTACTAGTGTTAAAGCAAATTTAGTGGCCATTAGGTAGTGTTTCTTATGTAGCCAGAACTGGGATGAGGCTTTGAACTTCTATTTGTAAGTACTCTTTTCTCCCTGGTAAGCTTAGTTTCTCACTAATACATTCCATAGGTTTACCAATCTTAGATAGAACTGCTCCTACACCTTTAGCAGAACCATCCATCTGGACTTCATTGATTTCCACTAAAGATCCTAAGAACAACTGTTTTGTAAGATCATGCACTTTGAGATATTAAAGTAAAGCTCGTCTAAGTAGACAATTAGAATTTACCAAAGTATGGTCATAATACATGTATCATGAGGCACATAAAAGTACTTGGAGTATTGATCGAGCTAAAACGTATATGCACAACTTGCCTTATCTGCAAAGACTCGTCTGGGTCTTAAAGGCTATTTTTCATTTTCTCTTGGTTTGATTGTCGTGACTGCTTAATCAGCCTACAAGTTTTGAAAGTGGTTTCGTTTTGTTCACGGATTAGATATTTTATGGCAAACTTTTACCTCTATTTTCAATATGTATTCTTTATATCATTCTAGTTCAACAGTGAATGTCATTGTGAATTCCTCAGGACAGGTATCCTTTTTATGCTTGATGTATACCTCTAGTGCAATTAAACCCAACTTATCGTGCTTTGTCTTCTGTCTTTTCTGTATGCAGCGTTTAATTAATTCGACATTTCACCTTTTATTATGTAGGCTATACTGTTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGTGAGTAAGAAATATTAGATCTTTTATGTGTTGTGTTTTGTTCTAACTTTTTCCTTTTTCTAAAAAAGCTGCATGTTTCCAAACGAACTGCAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAAAGACACGTTTCATGAGTACAACCAAGTTGTCCGGTGTTCACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTATCTTCTTCCCTCTAGCAGTCTGAAATGTCTAGCTTGCTAATCACATGAAATGGGTTCGAGTTGATTCATTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGCTCGTAGATTTGGGGAATGTTGATCTTTTGAAAAAGGTTGTTTGTGGCTGGAGTTCGGAAAATTCGTAGTAACATGTGTCTTGTACATTCGATTGGAGGTTATGGAGATGAAAGATTACTTGTGTTTGGTATGCCTTACATTGTTTGTGTTAGACATGAATTTATATTCCTATTAATTCCTATTAAATCCATCCATTTAAAATCAACCCAGCATTATCTAAATAAACTTATTTTCGA

mRNA sequence

TACAACAGTGCTTTCGTTTAATCCTTTGTTTGTAGATTCTCTACATATTTTGAATTCTACAGTTGCAATAATACTTCACCAAAATTTCAAACAAAGCCTCGGGTTGGCAGTGCTACTTCGTCATCGTCCCGGTTTCACTATGGTTACTTCCAATCGGAGAACGCCGCCGTTATTTCTTTCCAGACTTTGAAACTACACTTTCCACCCAAGTTTTCACTAATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGAAACAGTTTGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGCTATACTGTTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAAAGACACGTTTCATGAGTACAACCAAGTTGTCCGGTGTTCACTGTACAGTAAAAATGATGTGAAATTGAAGCAGGTTCTTATCTTCTTCCCTCTAGCAGTCTGAAATGTCTAGCTTGCTAATCACATGAAATGGGTTCGAGTTGATTCATTCTAGATAATGACCACCACTTTAGTTGGAAAGATAGCTCGTAGATTTGGGGAATGTTGATCTTTTGAAAAAGGTTGTTTGTGGCTGGAGTTCGGAAAATTCGTAGTAACATGTGTCTTGTACATTCGATTGGAGGTTATGGAGATGAAAGATTACTTGTGTTTGGTATGCCTTACATTGTTTGTGTTAGACATGAATTTATATTCCTATTAATTCCTATTAAATCCATCCATTTAAAATCAACCCAGCATTATCTAAATAAACTTATTTTCGA

Coding sequence (CDS)

ATGGGAAAGAACCCTAAATCTTCTGCTCATCCTGTTGCAACCCTTCAATCCAAACCTTACGAAGATTCCTACGAAGGTGAACGTCTCGATGAGTTGCTACTGTCGATTCAGAGAGAGATAAAGACAGCTAGAGGTTTGAATGCGGAATCCTTGCCGGAAAAATTTTGGCTTAAGAAACAGTTTGCAATTGGAGTTAATGAGGTTACTAGAGCTCTTGAACGGATGACACCATGTGGGGATTCTGCTCGCTTAATGAACCCTAATTATAAGGCGTGTAAAGTCAAGCTTCAGGCTATACTGTTAACAGCCAATTGCAACCCTCGATGGCTTACAAACCATGTGCCTTGCTTGGCCATGTCTAGGAAGGTACCATTGATACTCGTGAAAGATAAAGAAGGATCATTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGTCGAATGGGAGCCCTGTTAATCAACTTATTGATGAAATTCTTCAAAGAACAAAATAA

Protein sequence

MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK*

Homology

[Close]

BLAST of MELO3C005192 vs. TrEMBL
Match: A0A059DEG5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01003 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.2e-42
Identity = 104/174 (59.77%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 3   KNPKSSAHPVATLQSKPYED---SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 62
           K PK +    A   S P E    ++EGE L  LL SIQ +IK AR L+ E+LPEK WLK+
Sbjct: 6   KAPKPAPPEPAKPGSGPQEQDRSTFEGESLGLLLESIQGKIKAARSLDGEALPEKIWLKQ 65

Query: 63  QFAIGVNEVTRALERMTPCGDS------ARLMNPNYKACKVKLQAILLTANCNPRWLTNH 122
           QFAIGVNEVTR LERM P  D+        LM+ N  A   +LQAILL ++CNPRWLT H
Sbjct: 66  QFAIGVNEVTRVLERMPPSNDADDCPLEESLMSSNDNASYPRLQAILLASDCNPRWLTRH 125

Query: 123 VPCLAMSRKVPLILVKDKE-GSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEIL 167
           +P LA+SRKVPLI VKDK+ GSLRLGELVNLKTAIAIGIK+ G+ VN +I +IL
Sbjct: 126 LPSLALSRKVPLIFVKDKKRGSLRLGELVNLKTAIAIGIKAKGNAVNHIIQKIL 179

[Close]

BLAST of MELO3C005192 vs. TrEMBL
Match: A0A151SSA2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_003896 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.5e-42
Identity = 94/150 (62.67%), Postives = 115/150 (76.67%), Query Frame = 1


Query: 24  YEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGD--- 83
           YEGERL  LL SI REI++ R L+  SLPEK W K+QF+IGVN+VTR LERM PC +   
Sbjct: 31  YEGERLTSLLQSIHREIQSTRLLDGSSLPEKIWFKQQFSIGVNDVTRVLERMNPCTELER 90

Query: 84  SARL--MNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKD-KEGSLRL 143
           SA L  +  N+KA  VKLQA+L+ ++CNPRWLT H+P LA SR VPLI V+D K+GSLRL
Sbjct: 91  SAELFPLRRNHKASSVKLQAVLVASDCNPRWLTKHLPSLASSRSVPLIFVRDNKQGSLRL 150

Query: 144 GELVNLKTAIAIGIKSNGSPVNQLIDEILQ 168
           GELV LKTAIAIGIK  GS +N+++ EI+Q
Sbjct: 151 GELVQLKTAIAIGIKVKGSTINKIVQEIIQ 180

[Close]

BLAST of MELO3C005192 vs. TrEMBL
Match: A0A061DZK2_THECC (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative OS=Theobroma cacao GN=TCM_004947 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41
Identity = 94/146 (64.38%), Postives = 112/146 (76.71%), Query Frame = 1


Query: 22  DSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDS 81
           D YEGERL  +L SIQR +++AR L   S PEK WLK+QFAIGVN+VTR LERM P  D 
Sbjct: 21  DCYEGERLVRVLKSIQRGVESARELAGNSFPEKIWLKQQFAIGVNDVTRVLERMAPIADK 80

Query: 82  ARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKD-KEGSLRLGEL 141
                 + +A  V+LQAILL A+CNPRWLT H+P LA SRKVPLI VKD K+GSLRLGEL
Sbjct: 81  ----GSSAQAPCVRLQAILLAADCNPRWLTKHLPTLASSRKVPLIFVKDNKKGSLRLGEL 140

Query: 142 VNLKTAIAIGIKSNGSPVNQLIDEIL 167
           V LKTAIAIG+K+ G+ +NQ+I+EIL
Sbjct: 141 VKLKTAIAIGVKARGNAINQIIEEIL 162

[Close]

BLAST of MELO3C005192 vs. TrEMBL
Match: A0A0A0KJ77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128230 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-41
Identity = 89/100 (89.00%), Postives = 91/100 (91.00%), Query Frame = 1


Query: 1   MGKNPKSSAHPVATLQSKPYED-SYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60
           MGKNPKSS+HPVA LQSKP +D SYEGERLDELLLSIQREIKT R LNAESLPEKFWLKK
Sbjct: 1   MGKNPKSSSHPVAPLQSKPNQDISYEGERLDELLLSIQREIKTTRDLNAESLPEKFWLKK 60

Query: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAI 100
           QFAIGVNEVTR LERMTPCGDSARLMNPNYK C VKLQ I
Sbjct: 61  QFAIGVNEVTRVLERMTPCGDSARLMNPNYKTCTVKLQVI 100

[Close]

BLAST of MELO3C005192 vs. TrEMBL
Match: I1LAT7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G137900 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40
Identity = 94/171 (54.97%), Postives = 121/171 (70.76%), Query Frame = 1


Query: 3   KNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFA 62
           K PK   +   +  S    + YEGERL  LL SI+R I++AR L+  SLPEK WLK+QF+
Sbjct: 8   KTPKKDGNNSNSSLSSLENNFYEGERLTNLLQSIRRGIQSARHLDGSSLPEKIWLKQQFS 67

Query: 63  IGVNEVTRALERMTPCGD---SARL--MNPNYKACKVKLQAILLTANCNPRWLTNHVPCL 122
           IGVN+VTR LERM PC +   S  L  +  N+ A  VKLQA+L+ ++CNPRWLT H+  L
Sbjct: 68  IGVNDVTRVLERMKPCTELESSTELISLRSNHTASSVKLQAVLVASDCNPRWLTKHLLSL 127

Query: 123 AMSRKVPLILVKD-KEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQ 168
           A SR VPL+ V+D K+GSLRLGELV LKTAIAIGIK  GS +N++I +++Q
Sbjct: 128 ASSRNVPLVFVRDTKQGSLRLGELVQLKTAIAIGIKVKGSTINKIIQQVIQ 178

[Close]

BLAST of MELO3C005192 vs. TAIR10
Match: AT4G01790.1 (AT4G01790.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein)

HSP 1 Score: 154.8 bits (390), Expect = 4.7e-38
Identity = 84/148 (56.76%), Postives = 101/148 (68.24%), Query Frame = 1


Query: 22  DSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQFAIGVNEVTRALERMTPCGDS 81
           D YEGERL  LL  IQR I+T++  N  SLPEK WLKKQ AIG+NEVTR LERM P   S
Sbjct: 24  DYYEGERLTHLLDLIQRGIETSKLSNVNSLPEKIWLKKQIAIGINEVTRVLERMNPNNTS 83

Query: 82  ARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMSRKVPLILVKD-KEGSLRLGEL 141
            +  NP       +LQ ++L A+C PR LT H+P LA SR VP++ V+D K  SLRLGEL
Sbjct: 84  DQQQNPK------QLQVVILVADCKPRMLTKHIPNLAASRNVPVLYVRDNKRASLRLGEL 143

Query: 142 VNLKTAIAIGIKSNGSPVNQLIDEILQR 169
           V LKTA+AIGIK+ G+ +N L+ +IL R
Sbjct: 144 VKLKTALAIGIKARGNDLNLLLKQILPR 165

[Close]

BLAST of MELO3C005192 vs. NCBI nr
Match: gi|659072583|ref|XP_008466288.1| (PREDICTED: ribonuclease P protein subunit p38 isoform X5 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 2.2e-90
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1


Query: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60
           MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMS 120
           FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMS
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMS 120

Query: 121 RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK 171
           RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Sbjct: 121 RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK 170

[Close]

BLAST of MELO3C005192 vs. NCBI nr
Match: gi|659072581|ref|XP_008466280.1| (PREDICTED: ribonuclease P protein subunit p38 isoform X4 [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 5.5e-89
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 1


Query: 1   MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60
           MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAM 120
           QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAM
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAM 120

Query: 121 SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK 171
           SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK
Sbjct: 121 SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRTK 171

[Close]

BLAST of MELO3C005192 vs. NCBI nr
Match: gi|659072577|ref|XP_008466263.1| (PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo])

HSP 1 Score: 329.3 bits (843), Expect = 3.9e-87
Identity = 170/187 (90.91%), Postives = 170/187 (90.91%), Query Frame = 1


Query: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60
           MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ-----------------AILLTA 120
           FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ                 AILLTA
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLTA 120

Query: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 171
           NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID
Sbjct: 121 NCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLID 180

[Close]

BLAST of MELO3C005192 vs. NCBI nr
Match: gi|659072575|ref|XP_008466254.1| (PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo])

HSP 1 Score: 324.7 bits (831), Expect = 9.6e-86
Identity = 170/188 (90.43%), Postives = 170/188 (90.43%), Query Frame = 1


Query: 1   MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60
           MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ-----------------AILLT 120
           QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ                 AILLT
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120

Query: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 171
           ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI
Sbjct: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 180

[Close]

BLAST of MELO3C005192 vs. NCBI nr
Match: gi|659072579|ref|XP_008466271.1| (PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo])

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-83
Identity = 168/188 (89.36%), Postives = 168/188 (89.36%), Query Frame = 1


Query: 1   MGKNPKSSAHPVATLQSKPYEDS-YEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60
           MGKNPKSSAHPVATLQSKPYEDS YEGERLDELLLSIQREIKTARGLNAESLPEKFWLK 
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLK- 60

Query: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ-----------------AILLT 120
            FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQ                 AILLT
Sbjct: 61  -FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQVVYSVIYVGQCYLGFRLAILLT 120

Query: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 171
           ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI
Sbjct: 121 ANCNPRWLTNHVPCLAMSRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLI 180

The following BLAST results are available for this feature:

BLAST of MELO3C005192 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A059DEG5_EUCGR	1.2e-42	59.77	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01003 PE=4 SV=1	[more]
A0A151SSA2_CAJCA	3.5e-42	62.67	Uncharacterized protein OS=Cajanus cajan GN=KK1_003896 PE=4 SV=1	[more]
A0A061DZK2_THECC	1.7e-41	64.38	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative OS=Theobroma ca...	[more]
A0A0A0KJ77_CUCSA	1.7e-41	89.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G128230 PE=4 SV=1	[more]
I1LAT7_SOYBN	1.1e-40	54.97	Uncharacterized protein OS=Glycine max GN=GLYMA_10G137900 PE=4 SV=1	[more]

BLAST of MELO3C005192 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01790.1	4.7e-38	56.76	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

BLAST of MELO3C005192 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072583\|ref\|XP_008466288.1\|	2.2e-90	100.00	PREDICTED: ribonuclease P protein subunit p38 isoform X5 [Cucumis melo]	[more]
gi\|659072581\|ref\|XP_008466280.1\|	5.5e-89	99.42	PREDICTED: ribonuclease P protein subunit p38 isoform X4 [Cucumis melo]	[more]
gi\|659072577\|ref\|XP_008466263.1\|	3.9e-87	90.91	PREDICTED: uncharacterized protein LOC103503720 isoform X2 [Cucumis melo]	[more]
gi\|659072575\|ref\|XP_008466254.1\|	9.6e-86	90.43	PREDICTED: uncharacterized protein LOC103503720 isoform X1 [Cucumis melo]	[more]
gi\|659072579\|ref\|XP_008466271.1\|	4.5e-83	89.36	PREDICTED: uncharacterized protein LOC103503720 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45
IPR004038	Ribosomal_L7Ae/L30e/S12e/Gad45

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051252	regulation of RNA metabolic process
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0008033	tRNA processing
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005655	nucleolar ribonuclease P complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004526	ribonuclease P activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU48254	melon EST collection version 4.0	transcribed_cluster
MU65616	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C005192T1	MELO3C005192T1	mRNA
MELO3C005192T2	MELO3C005192T2	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU48254	MU48254	transcribed_cluster
MU65616	MU65616	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 94..157 score: 5.
None	No IPR available	PANTHER	PTHR21596	RIBONUCLEASE P SUBUNIT P38	coord: 28..75 score: 2.0E-23coord: 95..168 score: 2.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C005192	Csa5G126730	Cucumber (Chinese Long) v2	cumeB362
MELO3C005192	Cla005860	Watermelon (97103) v1	mewmB030
MELO3C005192	ClCG01G007180	Watermelon (Charleston Gray)	mewcgB019
MELO3C005192	Cla97C01G007590	Watermelon (97103) v2	mewmbB009
MELO3C005192	Bhi12G000908	Wax gourd	mewgoB012
MELO3C005192	CSPI05G02430	Wild cucumber (PI 183967)	cpimeB352
MELO3C005192	Cucsa.374210	Cucumber (Gy14) v1	cgymeB607
MELO3C005192	CmaCh15G008570	Cucurbita maxima (Rimu)	cmameB252
MELO3C005192	CmoCh15G008890	Cucurbita moschata (Rifu)	cmomeB240
MELO3C005192	Lsi09G007630	Bottle gourd (USVL1VR-Ls)	lsimeB013
MELO3C005192	Cp4.1LG13g06130	Cucurbita pepo (Zucchini)	cpemeB157
MELO3C005192	CsGy5G012500	Cucumber (Gy14) v2	cgybmeB302
MELO3C005192	Carg01350	Silver-seed gourd	carmeB0821
MELO3C005192	CsaV3_5G018620	Cucumber (Chinese Long) v3	cucmeB361

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C005192	Cucurbita maxima (Rimu)	cmameB635
MELO3C005192	Cucurbita moschata (Rifu)	cmomeB625
MELO3C005192	Cucurbita pepo (Zucchini)	cpemeB359
MELO3C005192	Silver-seed gourd	carmeB0483