MELO3C003999 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C003999
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description60S acidic ribosomal protein P3
Locationchr5 : 21385098 .. 21386436 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACATAAAAACCAAACACAATCCGTAGGAGAGAGCCGTCCACTCCATACTCACTCCCTAATTCTCTTCAACCCAAATCTCCATTCCAACATCGAACCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCCGACTCCACCTACGAGCTCCAGAGGAAACTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCTTTCTCCTTCATTACTCCTACCTCCGCCGTTTTCCAGGTATTCATCGTTTTCTCTGTTATTCTGGGTTTTCACTCCTCTTGATCTGATCCGTTTACTCTTCAATCTATAACTATAAACTCGCCTACTCAGTTTTTGTTTGATTGTTTAGTCTACTTAGTAATGTTTTTGTATGATGAATATGTATCTTTTATCCCTTTTTTTTTTTCGTGTAATGGGGGTCGATTGTTTTTCTAGTTTTTACCTATTTTGTGTTCGTTTGAAACTTGGGCATGATGTTTGATTTTTATGTTGGCGTCTTGACAATTGTGATTATGGGTTTTGGGTACGTGATCGGCTAAGCAACTATTGATTATGGGAATTTGCTAAATATATGGACTTATGATGAATTAAAGCATTTTTGGCGATCATCCTTTTAGTGTGTTCATCCATGAGTTTCTTGATTAGTGTACTTCTTATCTGCACTCACTCATTGAATTTTAAGAAGATCTATAACATGTTTCAAGCAAAAATGTGTAATCCCCAGTCATAGATAGTTCTTCTGAGATTGAGGTTTTTATTTAAGCTCTTATTTATGATTTATGACATCTCCTCAAGTAGTTTCCTCCTTGCTTGTCTGTTGTTATCTGTTGTTTTTGCATGGTTTAAACATTAATATTTCAGGTGATTGTTGGCGGTGGAGGTGGTGGTGGTTTCATAGGCGGTGGGGCTGCAGCTGCCCCTGCTGGAGGTGATGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGTGATGATGAAGACCTTGGCCTATCACTTTTTGATTAGTTTGGTATTAATTACTTGTTATTGTTTTTATCAAACCTCAGAGTTTGTAGCACTCAGGTTTTCTTTTCTGGAAATTACGTCTATGCATTTACTTGAATTTGCAAGTTCAGTTGATGTTCTTGTTTAAGGACGTAAATTTTGTTACTGACCCTTGTCAAATGGTTGAGAATTAGATATGTTATTTTGTTATTTCGTTTGGGAAGTTACTTACTGATTTCATCCATCATAGATTTTATCTATTTGTTGTTAG

mRNA sequence

AACATAAAAACCAAACACAATCCGTAGGAGAGAGCCGTCCACTCCATACTCACTCCCTAATTCTCTTCAACCCAAATCTCCATTCCAACATCGAACCAAACAATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCCGACTCCACCTACGAGCTCCAGAGGAAACTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCTTTCTCCTTCATTACTCCTACCTCCGCCGTTTTCCAGGTGATTGTTGGCGGTGGAGGTGGTGGTGGTTTCATAGGCGGTGGGGCTGCAGCTGCCCCTGCTGGAGGTGATGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGTGATGATGAAGACCTTGGCCTATCACTTTTTGATTAGTTTGGTATTAATTACTTGTTATTGTTTTTATCAAACCTCAGAGTTTGTAGCACTCAGGTTTTCTTTTCTGGAAATTACGTCTATGCATTTACTTGAATTTGCAAGTTCAGTTGATGTTCTTGTTTAAGGACGTAAATTTTGTTACTGACCCTTGTCAAATGGTTGAGAATTAGATATGTTATTTTGTTATTTCGTTTGGGAAGTTACTTACTGATTTCATCCATCATAGATTTTATCTATTTGTTGTTAG

Coding sequence (CDS)

ATGGGAGTTTTCACCTTCGTCTGTCGGAGCTCCGGTGGCAAGTGGACCGCCAATCAGTATTCCGGTGACCTTGAAGGCTCCGCCGACTCCACCTACGAGCTCCAGAGGAAACTCGTTCAATCTGCTCTCTCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCTTTCTCCTTCATTACTCCTACCTCCGCCGTTTTCCAGGTGATTGTTGGCGGTGGAGGTGGTGGTGGTTTCATAGGCGGTGGGGCTGCAGCTGCCCCTGCTGGAGGTGATGCTCCAGCTGCTGCAGAAGCCCCAGCTGAGAAGAAGGAAGAGGTGAAGGAAGAGAGTGATGATGAAGACCTTGGCCTATCACTTTTTGATTAG

Protein sequence

MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITPTSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD*
Homology
[Close]
BLAST of MELO3C003999 vs. Swiss-Prot
Match: RLA32_ARATH (60S acidic ribosomal protein P3-2 OS=Arabidopsis thaliana GN=RPP3B PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.8e-38
Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P
Sbjct: 1   MGVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVSP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           TSAVF V++GGGGGGGF  GG AAA  GG   AAA    E+K++ + E ++ D G  LF
Sbjct: 61  TSAVFVVVIGGGGGGGFAAGGGAAAGGGGGGEAAAATKEEEKKKEESEEEEGDFGFDLF 119

[Close]
BLAST of MELO3C003999 vs. Swiss-Prot
Match: RLA31_ARATH (60S acidic ribosomal protein P3-1 OS=Arabidopsis thaliana GN=RPP3A PE=3 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.0e-36
Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++P
Sbjct: 1   MGVFTFVCKNGGGAWSAKQHEGELESSASSTYELQRKLVQVSLSADSSGGVQSSFSLVSP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           TSAVFQVIVGGGGGGGF  GGAA++  G    AAA    EKK+E  EE ++ D G  LF
Sbjct: 61  TSAVFQVIVGGGGGGGFSAGGAASSGGGAGEAAAAPKEDEKKKEESEE-EEGDFGFDLF 118

[Close]
BLAST of MELO3C003999 vs. Swiss-Prot
Match: RLA3_ORYSJ (60S acidic ribosomal protein P3 OS=Oryza sativa subsp. japonica GN=Os06g0701400 PE=3 SV=3)

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-35
Identity = 78/120 (65.00%), Postives = 89/120 (74.17%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGV+TFVCRSSG +WTA Q  G+LE SA + YELQR+LV +A + DS+ GVQSSFS ++P
Sbjct: 1   MGVYTFVCRSSGDEWTAKQLKGELEASAATPYELQRRLVAAASAADSAAGVQSSFSMVSP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 120
           +SAVFQVI+G  GGG  IGGGAAA  A G A A A    EKKEE KEES+D DLG SLFD
Sbjct: 61  SSAVFQVIIGAVGGGAAIGGGAAAGAASGGAAAEAPKAEEKKEEEKEESED-DLGFSLFD 119

[Close]
BLAST of MELO3C003999 vs. Swiss-Prot
Match: RLA3_MAIZE (60S acidic ribosomal protein P3 OS=Zea mays GN=RPP3A PE=1 SV=3)

HSP 1 Score: 145.6 bits (366), Expect = 3.5e-34
Identity = 74/123 (60.16%), Postives = 93/123 (75.61%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGV+TFVCR++GG+WTA Q+SG++E SA + YELQR+LV +A + DS  GVQSSFS +TP
Sbjct: 1   MGVYTFVCRNNGGEWTAKQHSGEIEASAATPYELQRRLVAAASAADSRYGVQSSFSMVTP 60

Query: 61  TSAVFQVIVGGGGGGGFI---GGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLS 120
           +SAVFQVIVG  GGG  +   GGG  AA +GG   AAAEAP E+K+E ++E  D+D+G S
Sbjct: 61  SSAVFQVIVGAVGGGAMMVSGGGGGGAAASGG---AAAEAPKEEKKEEEKEESDDDMGFS 120

[Close]
BLAST of MELO3C003999 vs. Swiss-Prot
Match: RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.6e-08
Identity = 35/52 (67.31%), Postives = 35/52 (67.31%), Query Frame = 1 

Query: 69  VGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 121
           VG GGG   +   AAAAPAGG A AAA A  EKKEE KEESDD D+G SLFD
Sbjct: 62  VGSGGGAAPV---AAAAPAGGAAAAAAPAVEEKKEEAKEESDD-DMGFSLFD 109

[Close]
BLAST of MELO3C003999 vs. TrEMBL
Match: A0A0A0LJB2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060400 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-56
Identity = 116/121 (95.87%), Postives = 117/121 (96.69%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP
Sbjct: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60

Query: 61  TSAVFQVIVGGGGGGGF-IGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           +SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPAEKKEEVKEESDDEDLGLSLF
Sbjct: 61  SSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120

[Close]
BLAST of MELO3C003999 vs. TrEMBL
Match: A0A059CSI3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02261 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.6e-44
Identity = 96/121 (79.34%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVCRSSG +WTA Q SGDLE  A ST+ELQRKLVQSA++ DSSGGVQSSFS +TP
Sbjct: 1   MGVFTFVCRSSGDEWTAKQVSGDLEACAASTFELQRKLVQSAVAADSSGGVQSSFSLVTP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGG-AAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           +SAVFQVI+GGGGGGGFIGGG AAAAPAGG APAA  APAE+K+E KEESDD D+G SLF
Sbjct: 61  SSAVFQVIIGGGGGGGFIGGGAAAAAPAGGAAPAAEAAPAEEKKEEKEESDD-DMGFSLF 120

[Close]
BLAST of MELO3C003999 vs. TrEMBL
Match: A7LIT3_9ROSI (Acidic ribosomal protein P3 OS=Corchorus olitorius PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-43
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGV+TFVC+SS G+WTA Q+ G+LEGSA STYELQRKLVQ+A + DSSGGV SSFS ITP
Sbjct: 1   MGVYTFVCKSSAGEWTAKQFEGELEGSAPSTYELQRKLVQAAAAADSSGGVCSSFSLITP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 120
           TSAVFQVI+GGGGGGGFIGGGAAAAP+GG APAA    AE+K+E KEESDD D+G SLFD
Sbjct: 61  TSAVFQVIIGGGGGGGFIGGGAAAAPSGGAAPAAEAPAAEEKKEEKEESDD-DMGFSLFD 119

[Close]
BLAST of MELO3C003999 vs. TrEMBL
Match: W9SDZ4_9ROSA (60S acidic ribosomal protein P3-2 OS=Morus notabilis GN=L484_009210 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.0e-43
Identity = 98/122 (80.33%), Postives = 107/122 (87.70%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFV RSSGG+WTA Q+ GDLE SA STY+LQRKLVQSALS DSSGGVQ++FS ITP
Sbjct: 1   MGVFTFVLRSSGGEWTAKQHKGDLEASAASTYDLQRKLVQSALSQDSSGGVQTAFSLITP 60

Query: 61  TSAVFQVIVGGGGGGGFI-GGGAAAAPAGGDAPAAAEA-PAEKKEEVKEESDDEDLGLSL 120
           +SAVFQVIVGGGGGGGFI GGGAAAAPAGG   AAAEA PAE+K+E KEESDD D+G SL
Sbjct: 61  SSAVFQVIVGGGGGGGFIAGGGAAAAPAGGAGAAAAEAPPAEEKKEEKEESDD-DMGFSL 120

[Close]
BLAST of MELO3C003999 vs. TrEMBL
Match: A5BBF0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010073 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 6.5e-43
Identity = 94/122 (77.05%), Postives = 104/122 (85.25%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVCRSSG +WTA Q +GDLE SA STY+LQRK VQSALS DSSGGVQSSFS++TP
Sbjct: 1   MGVFTFVCRSSGKEWTAKQMNGDLEESAASTYDLQRKCVQSALSADSSGGVQSSFSYVTP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGG--AAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSL 120
           +S VFQVIVGGGGGGGF GGG  AAAAP+GG APAA   PAE+K+E KEESDD D+G SL
Sbjct: 61  SSGVFQVIVGGGGGGGFFGGGGAAAAAPSGGGAPAADAPPAEEKKEEKEESDD-DMGFSL 120

[Close]
BLAST of MELO3C003999 vs. TAIR10
Match: AT5G57290.1 (AT5G57290.1 60S acidic ribosomal protein family)

HSP 1 Score: 159.8 bits (403), Expect = 1.0e-39
Identity = 76/119 (63.87%), Postives = 90/119 (75.63%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVF+FVC+S GG+WTA Q+ GDLE SA STY+LQRKLVQ+ALS DSSGGVQSSFS ++P
Sbjct: 1   MGVFSFVCKSKGGEWTAKQHEGDLEASASSTYDLQRKLVQTALSADSSGGVQSSFSLVSP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           TSAVF V++GGGGGGGF  GG AAA  GG   AAA    E+K++ + E ++ D G  LF
Sbjct: 61  TSAVFVVVIGGGGGGGFAAGGGAAAGGGGGGEAAAATKEEEKKKEESEEEEGDFGFDLF 119

[Close]
BLAST of MELO3C003999 vs. TAIR10
Match: AT4G25890.1 (AT4G25890.1 60S acidic ribosomal protein family)

HSP 1 Score: 154.1 bits (388), Expect = 5.6e-38
Identity = 78/119 (65.55%), Postives = 89/119 (74.79%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVC++ GG W+A Q+ G+LE SA STYELQRKLVQ +LS DSSGGVQSSFS ++P
Sbjct: 1   MGVFTFVCKNGGGAWSAKQHEGELESSASSTYELQRKLVQVSLSADSSGGVQSSFSLVSP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           TSAVFQVIVGGGGGGGF  GGAA++  G    AAA    EKK+E  EE ++ D G  LF
Sbjct: 61  TSAVFQVIVGGGGGGGFSAGGAASSGGGAGEAAAAPKEDEKKKEESEE-EEGDFGFDLF 118

[Close]
BLAST of MELO3C003999 vs. TAIR10
Match: AT1G01100.1 (AT1G01100.1 60S acidic ribosomal protein family)

HSP 1 Score: 51.2 bits (121), Expect = 5.1e-07
Identity = 29/52 (55.77%), Postives = 29/52 (55.77%), Query Frame = 1 

Query: 69  VGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 121
           VG GGGGG     AAAAPA G   AAA A  EKK++   E  D DLG  LFD
Sbjct: 63  VGAGGGGG--APVAAAAPAAGGGAAAAPAAEEKKKDEPAEESDGDLGFGLFD 112

[Close]
BLAST of MELO3C003999 vs. TAIR10
Match: AT5G47700.1 (AT5G47700.1 60S acidic ribosomal protein family)

HSP 1 Score: 50.4 bits (119), Expect = 8.8e-07
Identity = 31/53 (58.49%), Postives = 31/53 (58.49%), Query Frame = 1 

Query: 69  VGGGGGGGFIGGGAAAAPA-GGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 121
           VG GGGGG     AAAAPA GG A AAA A  EKK++   E  D DLG  LFD
Sbjct: 63  VGAGGGGG--APVAAAAPAAGGGAAAAAPAAEEKKKDEPAEESDGDLGFGLFD 113

[Close]
BLAST of MELO3C003999 vs. TAIR10
Match: AT2G27710.1 (AT2G27710.1 60S acidic ribosomal protein family)

HSP 1 Score: 49.7 bits (117), Expect = 1.5e-06
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 1 

Query: 69  VGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 121
           V  GGGGG     A +   GG   +AAE+  E+K+E KEESDD D+G SLF+
Sbjct: 65  VPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDD-DMGFSLFE 115

[Close]
BLAST of MELO3C003999 vs. NCBI nr
Match: gi|659069721|ref|XP_008451467.1| (PREDICTED: 60S acidic ribosomal protein P3-2 isoform X1 [Cucumis melo])

HSP 1 Score: 239.2 bits (609), Expect = 3.8e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP
Sbjct: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 120
           TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD
Sbjct: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 120

[Close]
BLAST of MELO3C003999 vs. NCBI nr
Match: gi|449461181|ref|XP_004148320.1| (PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-56
Identity = 116/121 (95.87%), Postives = 117/121 (96.69%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP
Sbjct: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60

Query: 61  TSAVFQVIVGGGGGGGF-IGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           +SAVFQVIVGGG GGGF  GGGAAAAPAGG APAAAEAPAEKKEEVKEESDDEDLGLSLF
Sbjct: 61  SSAVFQVIVGGGSGGGFSAGGGAAAAPAGGAAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120

[Close]
BLAST of MELO3C003999 vs. NCBI nr
Match: gi|1009105682|ref|XP_015885559.1| (PREDICTED: 60S acidic ribosomal protein P3-2 [Ziziphus jujuba])

HSP 1 Score: 189.9 bits (481), Expect = 2.6e-45
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFV R+SGG+WT  Q+SGDLE SA S+YELQRKLVQSALS DSSGGVQ+S+S ITP
Sbjct: 1   MGVFTFVVRNSGGEWTGKQHSGDLEASAPSSYELQRKLVQSALSADSSGGVQTSYSLITP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 120
           +SAVFQVIVGGGGGGGFIGGGAAAAP+GG APAA  APAE+K+E KEESDD D+G SLFD
Sbjct: 61  SSAVFQVIVGGGGGGGFIGGGAAAAPSGGAAPAAEAAPAEEKKEEKEESDD-DMGFSLFD 119

[Close]
BLAST of MELO3C003999 vs. NCBI nr
Match: gi|702299035|ref|XP_010048598.1| (PREDICTED: 60S acidic ribosomal protein P3-like [Eucalyptus grandis])

HSP 1 Score: 186.0 bits (471), Expect = 3.8e-44
Identity = 96/121 (79.34%), Postives = 106/121 (87.60%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGVFTFVCRSSG +WTA Q SGDLE  A ST+ELQRKLVQSA++ DSSGGVQSSFS +TP
Sbjct: 1   MGVFTFVCRSSGDEWTAKQVSGDLEACAASTFELQRKLVQSAVAADSSGGVQSSFSLVTP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGG-AAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLF 120
           +SAVFQVI+GGGGGGGFIGGG AAAAPAGG APAA  APAE+K+E KEESDD D+G SLF
Sbjct: 61  SSAVFQVIIGGGGGGGFIGGGAAAAAPAGGAAPAAEAAPAEEKKEEKEESDD-DMGFSLF 120

[Close]
BLAST of MELO3C003999 vs. NCBI nr
Match: gi|154269254|gb|ABS72187.1| (acidic ribosomal protein P3 [Corchorus olitorius])

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 1 

Query: 1   MGVFTFVCRSSGGKWTANQYSGDLEGSADSTYELQRKLVQSALSVDSSGGVQSSFSFITP 60
           MGV+TFVC+SS G+WTA Q+ G+LEGSA STYELQRKLVQ+A + DSSGGV SSFS ITP
Sbjct: 1   MGVYTFVCKSSAGEWTAKQFEGELEGSAPSTYELQRKLVQAAAAADSSGGVCSSFSLITP 60

Query: 61  TSAVFQVIVGGGGGGGFIGGGAAAAPAGGDAPAAAEAPAEKKEEVKEESDDEDLGLSLFD 120
           TSAVFQVI+GGGGGGGFIGGGAAAAP+GG APAA    AE+K+E KEESDD D+G SLFD
Sbjct: 61  TSAVFQVIIGGGGGGGFIGGGAAAAPSGGAAPAAEAPAAEEKKEEKEESDD-DMGFSLFD 119

The following BLAST results are available for this feature:
BLAST of MELO3C003999 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLA32_ARATH1.8e-3863.8760S acidic ribosomal protein P3-2 OS=Arabidopsis thaliana GN=RPP3B PE=2 SV=1[more]
RLA31_ARATH1.0e-3665.5560S acidic ribosomal protein P3-1 OS=Arabidopsis thaliana GN=RPP3A PE=3 SV=1[more]
RLA3_ORYSJ1.4e-3565.0060S acidic ribosomal protein P3 OS=Oryza sativa subsp. japonica GN=Os06g0701400 ... [more]
RLA3_MAIZE3.5e-3460.1660S acidic ribosomal protein P3 OS=Zea mays GN=RPP3A PE=1 SV=3[more]
RLA1_MAIZE2.6e-0867.3160S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1[more]
BLAST of MELO3C003999 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJB2_CUCSA3.0e-5695.87Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060400 PE=4 SV=1[more]
A0A059CSI3_EUCGR2.6e-4479.34Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C02261 PE=3 SV=1[more]
A7LIT3_9ROSI1.0e-4376.67Acidic ribosomal protein P3 OS=Corchorus olitorius PE=2 SV=1[more]
W9SDZ4_9ROSA5.0e-4380.3360S acidic ribosomal protein P3-2 OS=Morus notabilis GN=L484_009210 PE=3 SV=1[more]
A5BBF0_VITVI6.5e-4377.05Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010073 PE=4 SV=1[more]
BLAST of MELO3C003999 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57290.11.0e-3963.87 60S acidic ribosomal protein family[more]
AT4G25890.15.6e-3865.55 60S acidic ribosomal protein family[more]
AT1G01100.15.1e-0755.77 60S acidic ribosomal protein family[more]
AT5G47700.18.8e-0758.49 60S acidic ribosomal protein family[more]
AT2G27710.11.5e-0650.00 60S acidic ribosomal protein family[more]
BLAST of MELO3C003999 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069721|ref|XP_008451467.1|3.8e-60100.00PREDICTED: 60S acidic ribosomal protein P3-2 isoform X1 [Cucumis melo][more]
gi|449461181|ref|XP_004148320.1|4.3e-5695.87PREDICTED: 60S acidic ribosomal protein P3-2 [Cucumis sativus][more]
gi|1009105682|ref|XP_015885559.1|2.6e-4580.00PREDICTED: 60S acidic ribosomal protein P3-2 [Ziziphus jujuba][more]
gi|702299035|ref|XP_010048598.1|3.8e-4479.34PREDICTED: 60S acidic ribosomal protein P3-like [Eucalyptus grandis][more]
gi|154269254|gb|ABS72187.1|1.4e-4376.67acidic ribosomal protein P3 [Corchorus olitorius][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006414 translational elongation
biological_process GO:0008150 biological_process
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46025melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003999T1MELO3C003999T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46025MU46025transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 76..119
score: 2.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C003999Csa2G060400Cucumber (Chinese Long) v2cumeB139
MELO3C003999Cla022802Watermelon (97103) v1mewmB422
MELO3C003999ClCG11G011930Watermelon (Charleston Gray)mewcgB367
MELO3C003999Cla97C11G217890Watermelon (97103) v2mewmbB369
MELO3C003999Bhi06G001097Wax gourdmewgoB453
MELO3C003999CSPI02G06240Wild cucumber (PI 183967)cpimeB139
MELO3C003999Cucsa.089140Cucumber (Gy14) v1cgymeB105
MELO3C003999CmaCh12G008990Cucurbita maxima (Rimu)cmameB175
MELO3C003999CmaCh05G007020Cucurbita maxima (Rimu)cmameB737
MELO3C003999CmoCh05G007380Cucurbita moschata (Rifu)cmomeB725
MELO3C003999CmoCh12G009060Cucurbita moschata (Rifu)cmomeB164
MELO3C003999Lsi11G007760Bottle gourd (USVL1VR-Ls)lsimeB115
MELO3C003999Cp4.1LG11g06430Cucurbita pepo (Zucchini)cpemeB100
MELO3C003999Cp4.1LG07g07410Cucurbita pepo (Zucchini)cpemeB777
MELO3C003999CsGy2G006400Cucumber (Gy14) v2cgybmeB120
MELO3C003999Carg24207Silver-seed gourdcarmeB0970
MELO3C003999Carg23923Silver-seed gourdcarmeB0619
MELO3C003999CsaV3_2G008580Cucumber (Chinese Long) v3cucmeB141
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C003999Silver-seed gourdcarmeB0786
MELO3C003999Cucumber (Chinese Long) v3cucmeB080
MELO3C003999Watermelon (97103) v2mewmbB399
MELO3C003999Wax gourdmewgoB492
MELO3C003999Melon (DHL92) v3.5.1memeB110
MELO3C003999Cucumber (Gy14) v1cgymeB088
MELO3C003999Cucurbita maxima (Rimu)cmameB075
MELO3C003999Cucurbita moschata (Rifu)cmomeB068
MELO3C003999Wild cucumber (PI 183967)cpimeB074
MELO3C003999Cucumber (Chinese Long) v2cumeB075
MELO3C003999Watermelon (Charleston Gray)mewcgB397
MELO3C003999Watermelon (97103) v1mewmB440
MELO3C003999Cucurbita pepo (Zucchini)cpemeB344
MELO3C003999Bottle gourd (USVL1VR-Ls)lsimeB419
MELO3C003999Cucumber (Gy14) v2cgybmeB067