MELO3C002636.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C002636.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	transcription factor TCP10-like
Location	chr12 : 22480671 .. 22481266 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTCTTGATGATCACGATAAGAAAAAGGCGAAGATTGGCAGGAGAAATCGTCGACTCTGTTCTAGTGCCGGTGCTGGTGCCGGCAAGGTTTATACTTCAAAAGGACTCCGAGCTAGGCGGCTTCGGCTGTCGGCTCCGACCGCCATTAAATTTTACGATCTTCAAGATCGCCTTGGATGTGGCCGACCAACTGAAGCCATCGATTGGCTTCTTCAGAATGCGAAACCCGCCATTGATGCCCTCTCTCGACCTTTACAAACAGAGGACAACGATTGCAGAAAACAGATTTTCAGTTTACCTGTTCCTTCATCTTCTTCTTCTTCGCAGTTCCAGTCTTACCCACTTCAAAATTTCTCCCAAAAGGTTAGAATTTTCTATTTTATTTGTTTTAAAGATTTCATTATTTTTTAGTTTAGTTTCATATCCGTTGCTGGAAATGAAGTTGTGTGATTCTGTAACAGGGCAACCTCTCTGTTTTCAGTCCAATGATTTTGAATGTCACGACGGCGGGATTTTCCGGCACCCAACCACCGTGTCCAAGTCAGAGCAATGTCGGAGCTGGTTTTCCTTTCTTTCCGATGTGGGAATAG

mRNA sequence

ATGGGTTCTCTTGATGATCACGATAAGAAAAAGGCGAAGATTGGCAGGAGAAATCGTCGACTCTGTTCTAGTGCCGGTGCTGGTGCCGGCAAGGTTTATACTTCAAAAGGACTCCGAGCTAGGCGGCTTCGGCTGTCGGCTCCGACCGCCATTAAATTTTACGATCTTCAAGATCGCCTTGGATGTGGCCGACCAACTGAAGCCATCGATTGGCTTCTTCAGAATGCGAAACCCGCCATTGATGCCCTCTCTCGACCTTTACAAACAGAGGACAACGATTGCAGAAAACAGATTTTCAGTTTACCTGTTCCTTCATCTTCTTCTTCTTCGCAGTTCCAGTCTTACCCACTTCAAAATTTCTCCCAAAAGGGCAACCTCTCTGTTTTCAGTCCAATGATTTTGAATGTCACGACGGCGGGATTTTCCGGCACCCAACCACCGTGTCCAAGTCAGAGCAATGTCGGAGCTGGTTTTCCTTTCTTTCCGATGTGGGAATAG

Coding sequence (CDS)

ATGGGTTCTCTTGATGATCACGATAAGAAAAAGGCGAAGATTGGCAGGAGAAATCGTCGACTCTGTTCTAGTGCCGGTGCTGGTGCCGGCAAGGTTTATACTTCAAAAGGACTCCGAGCTAGGCGGCTTCGGCTGTCGGCTCCGACCGCCATTAAATTTTACGATCTTCAAGATCGCCTTGGATGTGGCCGACCAACTGAAGCCATCGATTGGCTTCTTCAGAATGCGAAACCCGCCATTGATGCCCTCTCTCGACCTTTACAAACAGAGGACAACGATTGCAGAAAACAGATTTTCAGTTTACCTGTTCCTTCATCTTCTTCTTCTTCGCAGTTCCAGTCTTACCCACTTCAAAATTTCTCCCAAAAGGGCAACCTCTCTGTTTTCAGTCCAATGATTTTGAATGTCACGACGGCGGGATTTTCCGGCACCCAACCACCGTGTCCAAGTCAGAGCAATGTCGGAGCTGGTTTTCCTTTCTTTCCGATGTGGGAATAG

Protein sequence

MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNFSQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE

Homology

[Close]

BLAST of MELO3C002636.2 vs. NCBI nr
Match: XP_008443015.1 (PREDICTED: transcription factor TCP10-like [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 1.0e-88
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL 60
           MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL
Sbjct: 1   MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL 60

Query: 61  GCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNF 120
           GCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNF
Sbjct: 61  GCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNF 120

Query: 121 SQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 166
           SQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE
Sbjct: 121 SQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 165

[Close]

BLAST of MELO3C002636.2 vs. NCBI nr
Match: XP_011653401.1 (PREDICTED: transcription factor PCF8-like [Cucumis sativus] >KGN64714.1 hypothetical protein Csa_1G077150 [Cucumis sativus])

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 135/174 (77.59%), Postives = 137/174 (78.74%), Query Frame = 0


Query: 1   MGSLDDHDKKKAKIGRRNRRLCSS--AGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQD 60
           MGSL DHDK   KI RRNRRL S+  AGAG GKVYTSKGLRARRLRLSAPTAIKFYDLQD
Sbjct: 1   MGSLHDHDKNTTKIARRNRRLSSTADAGAGVGKVYTSKGLRARRLRLSAPTAIKFYDLQD 60

Query: 61  RLGCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIF-------SLPVPSSSSSSQ 120
           RLGCGRPTEAIDWLL NAK AIDALSRPLQTEDNDCRKQ F                   
Sbjct: 61  RLGCGRPTEAIDWLLLNAKSAIDALSRPLQTEDNDCRKQSFXXXXXXXXXXXXXXXXXXX 120

Query: 121 FQSYPLQNFSQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 166
             SYPLQNFSQKGNLSVF PMILN TT  FSGTQPPCPSQSN+GAGFPFFPMWE
Sbjct: 121 XXSYPLQNFSQKGNLSVFCPMILNATTGEFSGTQPPCPSQSNIGAGFPFFPMWE 174

[Close]

BLAST of MELO3C002636.2 vs. NCBI nr
Match: XP_023001760.1 (transcription factor PCF8-like [Cucurbita maxima])

HSP 1 Score: 207.2 bits (526), Expect = 4.2e-50
Identity = 109/147 (74.15%), Postives = 119/147 (80.95%), Query Frame = 0


Query: 19  RRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKP 78
           RRL SS  AG+GKVYTSKGLRARRLRLSAPTAI+FYD+QDRLG  RPTEAIDWLLQNAK 
Sbjct: 4   RRLRSS--AGSGKVYTSKGLRARRLRLSAPTAIQFYDIQDRLGYNRPTEAIDWLLQNAKS 63

Query: 79  AIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNFSQKGNLSVFSPMILNVTT 138
           AIDALSRPL+TED        +  VPSSSSSSQF +YPL+NF + GNLSV SPMI+NVT 
Sbjct: 64  AIDALSRPLETEDGKRSFPSMASSVPSSSSSSQFLAYPLENFFRNGNLSVLSPMIMNVTP 123

Query: 139 AGFSGTQPPCPSQSNVGAGFPFFPMWE 166
           A FSG QPPC SQSN  +G P FPMWE
Sbjct: 124 AEFSGMQPPCLSQSNATSGLPSFPMWE 148

[Close]

BLAST of MELO3C002636.2 vs. NCBI nr
Match: XP_007214360.1 (transcription factor TCP4 [Prunus persica] >ONI10615.1 hypothetical protein PRUPE_4G057100 [Prunus persica])

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSR-PLQT 90
           KVYTSKG R RR RLSAPTAI+FYD+QDRLG  RP++AIDWL++ AK AI+ALS   L  
Sbjct: 118 KVYTSKGPRDRRFRLSAPTAIQFYDVQDRLGYDRPSKAIDWLIEKAKAAIEALSESELPG 177

Query: 91  EDNDC 95
           ++ DC
Sbjct: 178 KEYDC 182

[Close]

BLAST of MELO3C002636.2 vs. NCBI nr
Match: XP_008225215.1 (PREDICTED: transcription factor TCP4-like [Prunus mume])

HSP 1 Score: 86.3 bits (212), Expect = 1.1e-13
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSR-PLQT 90
           KVYTSKG R RR RLSAPTAI+FYD+QDRLG  RP++AIDWL++ AK AI+ALS   L  
Sbjct: 118 KVYTSKGPRDRRFRLSAPTAIQFYDVQDRLGYDRPSKAIDWLIEKAKAAIEALSESELPG 177

Query: 91  EDNDC 95
           ++ DC
Sbjct: 178 KEYDC 182

[Close]

BLAST of MELO3C002636.2 vs. TAIR10
Match: AT1G53230.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3)

HSP 1 Score: 77.8 bits (190), Expect = 7.0e-15
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSR 86
           KV T+KG R RR+RLSAPTAI+FYD+QDRLG  RP++A+DWL+  AK AID L++
Sbjct: 55  KVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQ 109

[Close]

BLAST of MELO3C002636.2 vs. TAIR10
Match: AT2G31070.1 (TCP domain protein 10)

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-15
Identity = 36/53 (67.92%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 31 KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDAL 84
          KV+TSKG R RR+RLSA TAI+FYD+QDRLG  RP++A+DWL++ AK AID L
Sbjct: 35 KVFTSKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTAIDKL 87

[Close]

BLAST of MELO3C002636.2 vs. TAIR10
Match: AT3G15030.1 (TCP family transcription factor 4)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 34/54 (62.96%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALS 85
           KV T+KG R RR+RLSA TAI+FYD+QDRLG  RP++A+DWL++ AK +ID L+
Sbjct: 51  KVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELA 104

[Close]

BLAST of MELO3C002636.2 vs. TAIR10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSRPLQ 89
           KV T +GLR RR+RLS PTAI+ YDLQDRLG  +P++ IDWLL+ AK  +D L  PLQ
Sbjct: 69  KVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDKLP-PLQ 125

[Close]

BLAST of MELO3C002636.2 vs. TAIR10
Match: AT3G02150.2 (plastid transcription factor 1)

HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12
Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDAL 84
           KV T +GLR RR+RLS PTAI+ YDLQ+RLG  +P++A+DWLL  AK  ID L
Sbjct: 80  KVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAKEEIDEL 132

[Close]

BLAST of MELO3C002636.2 vs. Swiss-Prot
Match: sp|Q9MAH8|TCP3_ARATH (Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 36/55 (65.45%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSR 86
           KV T+KG R RR+RLSAPTAI+FYD+QDRLG  RP++A+DWL+  AK AID L++
Sbjct: 55  KVCTAKGPRDRRVRLSAPTAIQFYDVQDRLGFDRPSKAVDWLITKAKSAIDDLAQ 109

[Close]

BLAST of MELO3C002636.2 vs. Swiss-Prot
Match: sp|A2XMN1|PCF6_ORYSI (Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDAL 84
           KVYT+KG+R RR+RLS  TAI+FYDLQDRLG  +P++AI+WL+  A PAID L
Sbjct: 58  KVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLINAASPAIDTL 110

[Close]

BLAST of MELO3C002636.2 vs. Swiss-Prot
Match: sp|Q10CE8|PCF6_ORYSJ (Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDAL 84
           KVYT+KG+R RR+RLS  TAI+FYDLQDRLG  +P++AI+WL+  A PAID L
Sbjct: 58  KVYTAKGIRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLINAASPAIDTL 110

[Close]

BLAST of MELO3C002636.2 vs. Swiss-Prot
Match: sp|A2WV68|PCF7_ORYSI (Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDAL 84
           KV T++GLR RR+RL+A TAI+FYD+QDRLG  RP++A+DWL++NAK AID L
Sbjct: 146 KVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNAKAAIDEL 198

[Close]

BLAST of MELO3C002636.2 vs. Swiss-Prot
Match: sp|Q8LT05|PCF7_ORYSJ (Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.6e-13
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDAL 84
           KV T++GLR RR+RL+A TAI+FYD+QDRLG  RP++A+DWL++NAK AID L
Sbjct: 146 KVCTARGLRDRRVRLAAHTAIRFYDVQDRLGYDRPSKAVDWLMRNAKAAIDEL 198

[Close]

BLAST of MELO3C002636.2 vs. TrEMBL
Match: tr|A0A1S3B7T4|A0A1S3B7T4_CUCME (transcription factor TCP10-like OS=Cucumis melo OX=3656 GN=LOC103486739 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.8e-89
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL 60
           MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL
Sbjct: 1   MGSLDDHDKKKAKIGRRNRRLCSSAGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRL 60

Query: 61  GCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNF 120
           GCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNF
Sbjct: 61  GCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIFSLPVPSSSSSSQFQSYPLQNF 120

Query: 121 SQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 166
           SQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE
Sbjct: 121 SQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 165

[Close]

BLAST of MELO3C002636.2 vs. TrEMBL
Match: tr|A0A0A0LUP1|A0A0A0LUP1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077150 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 8.1e-66
Identity = 135/174 (77.59%), Postives = 137/174 (78.74%), Query Frame = 0


Query: 1   MGSLDDHDKKKAKIGRRNRRLCSS--AGAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQD 60
           MGSL DHDK   KI RRNRRL S+  AGAG GKVYTSKGLRARRLRLSAPTAIKFYDLQD
Sbjct: 1   MGSLHDHDKNTTKIARRNRRLSSTADAGAGVGKVYTSKGLRARRLRLSAPTAIKFYDLQD 60

Query: 61  RLGCGRPTEAIDWLLQNAKPAIDALSRPLQTEDNDCRKQIF-------SLPVPSSSSSSQ 120
           RLGCGRPTEAIDWLL NAK AIDALSRPLQTEDNDCRKQ F                   
Sbjct: 61  RLGCGRPTEAIDWLLLNAKSAIDALSRPLQTEDNDCRKQSFXXXXXXXXXXXXXXXXXXX 120

Query: 121 FQSYPLQNFSQKGNLSVFSPMILNVTTAGFSGTQPPCPSQSNVGAGFPFFPMWE 166
             SYPLQNFSQKGNLSVF PMILN TT  FSGTQPPCPSQSN+GAGFPFFPMWE
Sbjct: 121 XXSYPLQNFSQKGNLSVFCPMILNATTGEFSGTQPPCPSQSNIGAGFPFFPMWE 174

[Close]

BLAST of MELO3C002636.2 vs. TrEMBL
Match: tr|D6MK40|D6MK40_9ASPA (Transcription factor (Fragment) OS=Lycoris longituba OX=272140 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.2e-14
Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSRPLQTE 90
           KV T+KGLR RR+RLSA TAI+FYD+QDRLGC RP++A+DWL++NAK AID L      E
Sbjct: 20  KVCTAKGLRDRRVRLSAHTAIQFYDVQDRLGCDRPSKAVDWLIKNAKAAIDQLDELPPWE 79

Query: 91  DN---DCRKQIFSLPVPSSSSSSQF----QSYP----LQNFSQKGNLSVFSPMILNVTTA 145
            N   D +++  S+  P S+S++ F     SYP     +  S   +L +     L+ T  
Sbjct: 80  PNSSADFQEKQTSVHEPISTSTATFPINSSSYPPDLLSRTSSHAQDLRLSLQSFLDTTPD 139

[Close]

BLAST of MELO3C002636.2 vs. TrEMBL
Match: tr|M5WPC7|M5WPC7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G057100 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.2e-14
Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 0


Query: 31  KVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALSR-PLQT 90
           KVYTSKG R RR RLSAPTAI+FYD+QDRLG  RP++AIDWL++ AK AI+ALS   L  
Sbjct: 118 KVYTSKGPRDRRFRLSAPTAIQFYDVQDRLGYDRPSKAIDWLIEKAKAAIEALSESELPG 177

Query: 91  EDNDC 95
           ++ DC
Sbjct: 178 KEYDC 182

[Close]

BLAST of MELO3C002636.2 vs. TrEMBL
Match: tr|A0A199UI32|A0A199UI32_ANACO (Transcription factor PCF5 OS=Ananas comosus OX=4615 GN=ACMD2_16914 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.2e-13
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0


Query: 26 GAGAGKVYTSKGLRARRLRLSAPTAIKFYDLQDRLGCGRPTEAIDWLLQNAKPAIDALS 85
          G G GKV T++GLR RR+RLSA TAI+FYD+QDRLG  RP++A+DWLL+ A+PAID LS
Sbjct: 29 GVGMGKVCTARGLRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLLKKAQPAIDELS 87

The following BLAST results are available for this feature:

BLAST of MELO3C002636.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008443015.1	1.0e-88	100.00	PREDICTED: transcription factor TCP10-like [Cucumis melo]	[more]
XP_011653401.1	1.2e-65	77.59	PREDICTED: transcription factor PCF8-like [Cucumis sativus] >KGN64714.1 hypothet...	[more]
XP_023001760.1	4.2e-50	74.15	transcription factor PCF8-like [Cucurbita maxima]	[more]
XP_007214360.1	1.1e-13	66.15	transcription factor TCP4 [Prunus persica] >ONI10615.1 hypothetical protein PRUP...	[more]
XP_008225215.1	1.1e-13	66.15	PREDICTED: transcription factor TCP4-like [Prunus mume]	[more]

BLAST of MELO3C002636.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53230.1	7.0e-15	65.45	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3	[more]
AT2G31070.1	9.1e-15	67.92	TCP domain protein 10	[more]
AT3G15030.1	1.3e-13	62.96	TCP family transcription factor 4	[more]
AT5G60970.1	2.2e-13	62.07	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT3G02150.2	1.1e-12	62.26	plastid transcription factor 1	[more]

BLAST of MELO3C002636.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MAH8\|TCP3_ARATH	1.3e-13	65.45	Transcription factor TCP3 OS=Arabidopsis thaliana OX=3702 GN=TCP3 PE=1 SV=1	[more]
sp\|A2XMN1\|PCF6_ORYSI	1.6e-13	66.04	Transcription factor PCF6 OS=Oryza sativa subsp. indica OX=39946 GN=PCF6 PE=4 SV...	[more]
sp\|Q10CE8\|PCF6_ORYSJ	1.6e-13	66.04	Transcription factor PCF6 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF6 PE=2 ...	[more]
sp\|A2WV68\|PCF7_ORYSI	1.6e-13	66.04	Transcription factor PCF7 OS=Oryza sativa subsp. indica OX=39946 GN=PCF7 PE=4 SV...	[more]
sp\|Q8LT05\|PCF7_ORYSJ	1.6e-13	66.04	Transcription factor PCF7 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF7 PE=2 ...	[more]

BLAST of MELO3C002636.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B7T4\|A0A1S3B7T4_CUCME	6.8e-89	100.00	transcription factor TCP10-like OS=Cucumis melo OX=3656 GN=LOC103486739 PE=4 SV=...	[more]
tr\|A0A0A0LUP1\|A0A0A0LUP1_CUCSA	8.1e-66	77.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G077150 PE=4 SV=1	[more]
tr\|D6MK40\|D6MK40_9ASPA	3.2e-14	44.80	Transcription factor (Fragment) OS=Lycoris longituba OX=272140 PE=2 SV=1	[more]
tr\|M5WPC7\|M5WPC7_PRUPE	7.2e-14	66.15	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G057100 PE=4 SV=1	[more]
tr\|A0A199UI32\|A0A199UI32_ANACO	1.2e-13	67.80	Transcription factor PCF5 OS=Ananas comosus OX=4615 GN=ACMD2_16914 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR017887	TF_TCP_subgr
IPR005333	Transcription_factor_TCP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0008150	biological_process
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway
biological_process	GO:0009617	response to bacterium
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0010310	regulation of hydrogen peroxide metabolic process
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0045962	positive regulation of development, heterochronic
biological_process	GO:0048481	plant ovule development
biological_process	GO:0031348	negative regulation of defense response
biological_process	GO:0000165	MAPK cascade
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0030154	cell differentiation
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C002636.2.1	MELO3C002636.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005333	Transcription factor, TCP	PFAM	PF03634	TCP	coord: 31..121 e-value: 1.2E-23 score: 84.3
None	No IPR available	PANTHER	PTHR31072	FAMILY NOT NAMED	coord: 31..124
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 16..83 score: 22.58

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C002636.2	Csa1G077150	Cucumber (Chinese Long) v2	cumedB022
MELO3C002636.2	CSPI01G12480	Wild cucumber (PI 183967)	cpimedB023
MELO3C002636.2	Cucsa.127020	Cucumber (Gy14) v1	cgymedB197
MELO3C002636.2	CmaCh13G006160	Cucurbita maxima (Rimu)	cmamedB213
MELO3C002636.2	CmoCh13G006390	Cucurbita moschata (Rifu)	cmomedB201
MELO3C002636.2	Lsi02G007910	Bottle gourd (USVL1VR-Ls)	lsimedB189
MELO3C002636.2	CsGy1G012530	Cucumber (Gy14) v2	cgybmedB020
MELO3C002636.2	Bhi08G001851	Wax gourd	medwgoB165
MELO3C002636.2	Bhi09G002854	Wax gourd	medwgoB192
MELO3C002636.2	Carg17066	Silver-seed gourd	carmedB0175
MELO3C002636.2	Carg19866	Silver-seed gourd	carmedB0808
MELO3C002636.2	Carg21524	Silver-seed gourd	carmedB0936
MELO3C002636.2	CsaV3_1G012680	Cucumber (Chinese Long) v3	cucmedB022

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C002636.2	Cucumber (Gy14) v2	cgybmedB396
MELO3C002636.2	Cucumber (Gy14) v1	cgymedB019
MELO3C002636.2	Cucurbita maxima (Rimu)	cmamedB423
MELO3C002636.2	Cucurbita maxima (Rimu)	cmamedB677
MELO3C002636.2	Cucurbita maxima (Rimu)	cmamedB883
MELO3C002636.2	Cucurbita moschata (Rifu)	cmomedB408
MELO3C002636.2	Cucurbita moschata (Rifu)	cmomedB875
MELO3C002636.2	Cucurbita pepo (Zucchini)	cpemedB031
MELO3C002636.2	Cucurbita pepo (Zucchini)	cpemedB062
MELO3C002636.2	Cucurbita pepo (Zucchini)	cpemedB517
MELO3C002636.2	Cucurbita pepo (Zucchini)	cpemedB559
MELO3C002636.2	Cucurbita pepo (Zucchini)	cpemedB714
MELO3C002636.2	Wild cucumber (PI 183967)	cpimedB447
MELO3C002636.2	Cucumber (Chinese Long) v2	cumedB438
MELO3C002636.2	Melon (DHL92) v3.6.1	medmedB074
MELO3C002636.2	Bottle gourd (USVL1VR-Ls)	lsimedB138
MELO3C002636.2	Watermelon (Charleston Gray)	medwcgB131
MELO3C002636.2	Watermelon (Charleston Gray)	medwcgB142
MELO3C002636.2	Watermelon (97103) v1	medwmB144
MELO3C002636.2	Watermelon (97103) v1	medwmB164
MELO3C002636.2	Silver-seed gourd	carmedB0153
MELO3C002636.2	Silver-seed gourd	carmedB0557
MELO3C002636.2	Silver-seed gourd	carmedB0648
MELO3C002636.2	Cucumber (Chinese Long) v3	cucmedB454
MELO3C002636.2	Watermelon (97103) v2	medwmbB143
MELO3C002636.2	Watermelon (97103) v2	medwmbB130
MELO3C002636.2	Wax gourd	medwgoB159