Lsi09G010360 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi09G010360
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_5
Location	chr09 : 15402370 .. 15403907 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGGATGAATATTGAATAGAGAGGAAATCTCCCCGTCTCTCTCTCTATATCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTTTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCCTTTTGTTTTCATTTTATTTTCCAATTAACAAATCCGATTCCCCTGTCTCTTTGCCCCTTCTCTTATGTTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGTATAATCTCTCTATCACTTTTCTTTTCTTTTCTTTGTTTTTTTCTTCCTTTTTTATTCTATCTTCTAAGCTCTTTCAGTTCAAACTTTGAATTTTTAGATCTGCGTATTTACAGGATTGTGTTTTCAGCTCAGATGTTAAACAAAAACCCAATTTTTTTAGGGAAAGATTTGAGTTGTTTTTTAATTACCATATGCTTCTGCTAGATCTATTATGAATTGGGTTTTTTTTTTTTTCCTTTTCTTTTTACGAGATTCGTTTGTGTTGTCTGTACAGGCAAACAGAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGTACATAATTTTTACTTTTAATTATTGAAATTAATAGATTTCATCCGAAGCGGATTGATGGATATTTTGTGTGGTTTTTTTTCAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAGAAACCCGATCCAAGCCGAGCCGAGCCGATTGAGCAATGATGATGATGAAGAAAACAAACACATGGATTTTAATTTTTTTCCCCCACAAATTCAAATTAAATATTTAAAGTGAAATTTTGAAAAAAAAAAAAAAAACCTTTTTGACCAAAACACCATTATTGTAAATAATGTGAAAAAGAAATCCAAGTAAATATTATTTTAAAAGAAAAAAAAGGGGCCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGGTTGAGAGTCCTTGTTTGACCAATTGAAGAATAAAAGGCAGAGGAAGAGAGAGATATTCATAGGTTTTTGAGAATTGAGAGAATTAATATACCCTCTCTCTTTCTCTTCTCTATTTTGTAATATATC

mRNA sequence

AAAGGGATGAATATTGAATAGAGAGGAAATCTCCCCGTCTCTCTCTCTATATCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTTTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCCTTTTGTTTTCATTTTATTTTCCAATTAACAAATCCGATTCCCCTGTCTCTTTGCCCCTTCTCTTATGTTCTTGTTATAACTTATAATTCACGCTCCTCCCCTCTCCTTTTTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGCAAACAGAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAGAAACCCGATCCAAGCCGAGCCGAGCCGATTGAGCAATGATGATGATGAAGAAAACAAACACATGGATTTTAATTTTTTTCCCCCACAAATTCAAATTAAATATTTAAAGTGAAATTTTGAAAAAAAAAAAAAAAACCTTTTTGACCAAAACACCATTATTGTAAATAATGTGAAAAAGAAATCCAAGTAAATATTATTTTAAAAGAAAAAAAAGGGGCCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGGTTGAGAGTCCTTGTTTGACCAATTGAAGAATAAAAGGCAGAGGAAGAGAGAGATATTCATAGGTTTTTGAGAATTGAGAGAATTAATATACCCTCTCTCTTTCTCTTCTCTATTTTGTAATATATC

Coding sequence (CDS)

ATGAATTGGGTTTGTGAAGAGATGATGAGCGCCGCCGCCGCCGCCGACCGCCGTGAGCGAGTGGTTTGTCCAAAACCTCGCCGTCTCGGTCTCATGAATGATACCGGCAACGACAACCCATTTAGACACCGTTTTGATTCAGATGCTCTGGATCTCCTATTCTTTAAGGGTGGTTGTGGATTGGAGAATTTTAACAGTAGTAGTACACAATTAGCCTCGTCGCCGCCGTATTTTTGTGGGTCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGACGAGAAGCAGAAGCTGCTCCCCCTCTTCTCGCCGGCGGCTTCTCCTCCGTCGTCTCCACCGTCGTCGGCCGGTCGGAAAGGCGGATGTGTTCGGGTAAATTTTGGTAACAACCCGGCGGTGAGGATCGAGGGGTTTGATTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCTCTGGCTTAG

Protein sequence

MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA

Homology

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BLAST of Lsi09G010360 vs. TrEMBL
Match: A0A0A0KRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 5.7e-79
Identity = 145/160 (90.62%), Postives = 149/160 (93.12%), Query Frame = 1


Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM +  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDALDLLF KGGCG
Sbjct: 1   MNWVCEEMQT--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LENFNSS+ QLASSPPYFCGSPPSRVANPLIQDARFGDEK KLLPLFSPAASPP SPP S
Sbjct: 61  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of Lsi09G010360 vs. TrEMBL
Match: A0A061E6F3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 8.6e-43
Identity = 101/173 (58.38%), Postives = 121/173 (69.94%), Query Frame = 1


Query: 6   EEMMSAAAAA----DRRERVVCPKPRRLGLMNDTGNDNP-------FRHRFD-------S 65
           EEM S+ + +    DRRE +VCPKPRRL L+N T ND+P        RH+ +       S
Sbjct: 16  EEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRWQLRHQAELCDSKAGS 75

Query: 66  DALDLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLF 125
           D LD++  KGGC +E    S  Q+ASSPP+F GSPPSRVANPLIQDARFGDEK  + P+ 
Sbjct: 76  DLLDMILTKGGCAVEQ---SCAQVASSPPFFSGSPPSRVANPLIQDARFGDEK-IITPMS 135

Query: 126 SPAASPPSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            P +   SS PSS+ RKGGC+RVNFGN PAVR+EGFDC LDR+RRN SIPALA
Sbjct: 136 PPPSGLSSSSPSSSSRKGGCIRVNFGNKPAVRVEGFDC-LDRDRRNCSIPALA 183

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BLAST of Lsi09G010360 vs. TrEMBL
Match: D7T944_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03580 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.3e-42
Identity = 104/172 (60.47%), Postives = 117/172 (68.02%), Query Frame = 1


Query: 5   CEEMMSAAAAADRRERVVCPKPRRLGLMNDTGND--NPFRHRFDS-----------DALD 64
           CEEM  +  A++RR  VVCPKPRRLGL+N T  D   P R    +           D LD
Sbjct: 10  CEEMRRSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTELSDSKSGTDLLD 69

Query: 65  LLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAA 124
           ++  KGG G E    S TQ+ASSPP+F GSPPSRVANPLIQDARFGDE  KL P+  P  
Sbjct: 70  IILAKGGYGAE----SCTQVASSPPFFSGSPPSRVANPLIQDARFGDE--KLNPISPPLV 129

Query: 125 SPP---SSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           S P   SS PSS+ RKGGC+R NFGNNPAVRIEGFDC LDR+RRN SIPALA
Sbjct: 130 SVPSGLSSSPSSSARKGGCIRANFGNNPAVRIEGFDC-LDRDRRNCSIPALA 174

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BLAST of Lsi09G010360 vs. TrEMBL
Match: A0A067JZK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-40
Identity = 101/175 (57.71%), Postives = 119/175 (68.00%), Query Frame = 1


Query: 6   EEMMSAAAA--ADRRERVVCPKPRRLGLMNDTGNDNPFRH--------------RFDSDA 65
           EE+ S+     ++RR+ VVCPKPRRLG  N T +++P R               +  +D 
Sbjct: 15  EEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLSHQAELGDSKAGADL 74

Query: 66  LDLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK-QKLLPLFS 125
           LD++  KGG G+E    S TQ+ASSPP+FCGSPPSRVANPLIQDARFGDEK   + PL  
Sbjct: 75  LDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDARFGDEKLSPVSPLMP 134

Query: 126 PAASPP--SSP-PSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
               PP  SSP PSS+ RKGGCVR NFGN PAVRIEGFDC LDR+RRN SIPALA
Sbjct: 135 MPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDRRNCSIPALA 185

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BLAST of Lsi09G010360 vs. TrEMBL
Match: M1B5R3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.4e-40
Identity = 97/171 (56.73%), Postives = 121/171 (70.76%), Query Frame = 1


Query: 5   CEEMMSAAAA-ADRRERVVCPKPRRLGLMNDTGND--NPFR-----------HRFDSDAL 64
           CE+M S+ ++ +D+++ VVCPKPRRLGL+N T  +   P R            R  +D L
Sbjct: 14  CEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPLRPLRWHVSHQQELCDSRAGADLL 73

Query: 65  DLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK-QKLLPLFSP 124
           D++  KGG G +   SS+ Q+ASSPP+FCGSPPSRV+NPLIQDARFGDEK   + P   P
Sbjct: 74  DIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFGDEKVTPVSPRAIP 133

Query: 125 AASPPSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
             S  +S PS++ RKGGCVR NFGNNPAVR+EGFDC LDR+RRN SIPALA
Sbjct: 134 IPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRNCSIPALA 181

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BLAST of Lsi09G010360 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein)

HSP 1 Score: 137.1 bits (344), Expect = 9.4e-33
Identity = 84/172 (48.84%), Postives = 108/172 (62.79%), Query Frame = 1


Query: 7   EMMSAAAAADRRER--VVCPKPRRLGLMNDTGNDNP-----FRHRFD-------SDALDL 66
           ++ S++ +   R++  VVCPKPRR+GL N+  + +      F H+ +       +D LD+
Sbjct: 16  DLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDI 75

Query: 67  LFFKGGCGLENFNSSSTQLASSP-PYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSP-- 126
           +  K G G E  N    Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +  P  
Sbjct: 76  ILTKDGYGAEQVNK---QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQL 135

Query: 127 AASPPSSPPSSAGRKGGC-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
              P SSP SS+GRKGGC VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 136 GLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

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BLAST of Lsi09G010360 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 81/170 (47.65%), Postives = 98/170 (57.65%), Query Frame = 1


Query: 6   EEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCGL---- 65
           EEMM      DR++ VVCPKPRR+GL+ +     P R      A DL   K G  L    
Sbjct: 81  EEMMGF----DRKDLVVCPKPRRVGLLANNVI-RPLRLHMSQAAADLCDSKAGAELLEII 140

Query: 66  ---ENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEK-------QKLLPLFSPAA 125
              E+  +    L+SSPPYF GSPPSR ANPL QDARF DEK          L  +S   
Sbjct: 141 RRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQPYSATG 200

Query: 126 SPPSSPPSSAGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 161
            P  S  SS+    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 201 FPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

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BLAST of Lsi09G010360 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein)

HSP 1 Score: 112.8 bits (281), Expect = 1.9e-25
Identity = 73/171 (42.69%), Postives = 97/171 (56.73%), Query Frame = 1


Query: 6   EEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDN---PFRHRFD-------SDALDLLFF 65
           EEM   AA +DRR+ V+CPKPRR+G +N   + +      H+ +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNSSSTQLASSPP-YFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPP 125
           KGG G        T+   +PP +F GSPPSRV+NPL +D+ F +E   LL + SP+ S P
Sbjct: 73  KGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTP 132

Query: 126 SSP---PSSAGRKGGCVRV--NFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            +    P S+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 RATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

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BLAST of Lsi09G010360 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein)

HSP 1 Score: 108.6 bits (270), Expect = 3.6e-24
Identity = 73/145 (50.34%), Postives = 88/145 (60.69%), Query Frame = 1


Query: 19  ERVVCPKPRRLGLMNDTGNDNPFRHRFD-SDALDLLFFKGGCGL-ENFNSSSTQLASSPP 78
           + VVCPKPRR   +       PFR  F  S A D+   K G  L + F    +  + SPP
Sbjct: 29  DSVVCPKPRRANNVI-----RPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 79  YFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSSAGRKGGCVRVNFGNNP 138
           +F GSPPSR ANPL QDARFGDEK   L   SP+ SP    PS++  K GC R+ FG  P
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK---LNTVSPSLSP--LLPSASRVKSGCGRMKFGVKP 148

Query: 139 A-VRIEGFDCRLDRERRNRSIPALA 161
           A VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 ATVRVEGFDC-LNRDRPNSSIPAMA 162

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BLAST of Lsi09G010360 vs. NCBI nr
Match: gi|449445146|ref|XP_004140334.1| (PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 8.2e-79
Identity = 145/160 (90.62%), Postives = 149/160 (93.12%), Query Frame = 1


Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM +  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDALDLLF KGGCG
Sbjct: 1   MNWVCEEMQT--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LENFNSS+ QLASSPPYFCGSPPSRVANPLIQDARFGDEK KLLPLFSPAASPP SPP S
Sbjct: 61  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of Lsi09G010360 vs. NCBI nr
Match: gi|659131635|ref|XP_008465783.1| (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 297.4 bits (760), Expect = 1.5e-77
Identity = 144/160 (90.00%), Postives = 148/160 (92.50%), Query Frame = 1


Query: 1   MNWVCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRHRFDSDALDLLFFKGGCG 60
           MNWVCEEM S  AA DRRER+VCPKPRRLGL+NDT NDNPFRHRFDSDA+DLLF KGGCG
Sbjct: 1   MNWVCEEMRS--AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCG 60

Query: 61  LENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAASPPSSPPSS 120
           LE FNSS+TQLASS PYFCGSPPSRVANPLIQDARFGDEK KLLPLFS AASPP SPP S
Sbjct: 61  LEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPS 120

Query: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 AGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of Lsi09G010360 vs. NCBI nr
Match: gi|1009155285|ref|XP_015895630.1| (PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba])

HSP 1 Score: 183.3 bits (464), Expect = 3.2e-43
Identity = 104/179 (58.10%), Postives = 121/179 (67.60%), Query Frame = 1


Query: 4   VCEEMMSAAAAADRRERVVCPKPRRLGLMNDTGNDNPFRH--------------RFDSDA 63
           VCEEM S++   DRR+ VVCPKPRRLGL+N   +D+P R               R  S+ 
Sbjct: 13  VCEEMRSSSM--DRRDPVVCPKPRRLGLLNSAVHDHPIRSFRWHISHQAEPCDSRARSEL 72

Query: 64  LDLLFFKGGCGLENFNSS-STQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFS 123
           LD++  KGG G+E   SS +TQ+ASSPP+FCGSPPSRVANPLIQDARFGDEK       S
Sbjct: 73  LDIILTKGGYGVEVEQSSCTTQIASSPPFFCGSPPSRVANPLIQDARFGDEKAAPFSPLS 132

Query: 124 PAASP-------PSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           P   P       PS+  +S+ RKGGCVR NFGN PAVRIEGFDC LDR+RRN SIPALA
Sbjct: 133 PIPPPNGISSASPSAAATSSARKGGCVRANFGNKPAVRIEGFDC-LDRDRRNCSIPALA 188

[Close]

BLAST of Lsi09G010360 vs. NCBI nr
Match: gi|590693466|ref|XP_007044341.1| (Uncharacterized protein TCM_009867 [Theobroma cacao])

HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42
Identity = 101/173 (58.38%), Postives = 121/173 (69.94%), Query Frame = 1


Query: 6   EEMMSAAAAA----DRRERVVCPKPRRLGLMNDTGNDNP-------FRHRFD-------S 65
           EEM S+ + +    DRRE +VCPKPRRL L+N T ND+P        RH+ +       S
Sbjct: 16  EEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRWQLRHQAELCDSKAGS 75

Query: 66  DALDLLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLF 125
           D LD++  KGGC +E    S  Q+ASSPP+F GSPPSRVANPLIQDARFGDEK  + P+ 
Sbjct: 76  DLLDMILTKGGCAVEQ---SCAQVASSPPFFSGSPPSRVANPLIQDARFGDEK-IITPMS 135

Query: 126 SPAASPPSSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
            P +   SS PSS+ RKGGC+RVNFGN PAVR+EGFDC LDR+RRN SIPALA
Sbjct: 136 PPPSGLSSSSPSSSSRKGGCIRVNFGNKPAVRVEGFDC-LDRDRRNCSIPALA 183

[Close]

BLAST of Lsi09G010360 vs. NCBI nr
Match: gi|225423987|ref|XP_002282662.1| (PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera])

HSP 1 Score: 179.5 bits (454), Expect = 4.7e-42
Identity = 104/172 (60.47%), Postives = 117/172 (68.02%), Query Frame = 1


Query: 5   CEEMMSAAAAADRRERVVCPKPRRLGLMNDTGND--NPFRHRFDS-----------DALD 64
           CEEM  +  A++RR  VVCPKPRRLGL+N T  D   P R    +           D LD
Sbjct: 10  CEEMRRSVPASERRAPVVCPKPRRLGLLNATIVDPLRPIRWHLSNQTELSDSKSGTDLLD 69

Query: 65  LLFFKGGCGLENFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKQKLLPLFSPAA 124
           ++  KGG G E    S TQ+ASSPP+F GSPPSRVANPLIQDARFGDE  KL P+  P  
Sbjct: 70  IILAKGGYGAE----SCTQVASSPPFFSGSPPSRVANPLIQDARFGDE--KLNPISPPLV 129

Query: 125 SPP---SSPPSSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 161
           S P   SS PSS+ RKGGC+R NFGNNPAVRIEGFDC LDR+RRN SIPALA
Sbjct: 130 SVPSGLSSSPSSSARKGGCIRANFGNNPAVRIEGFDC-LDRDRRNCSIPALA 174

The following BLAST results are available for this feature:

BLAST of Lsi09G010360 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi09G010360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF1_CUCSA	5.7e-79	90.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1	[more]
A0A061E6F3_THECC	8.6e-43	58.38	Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1	[more]
D7T944_VITVI	3.3e-42	60.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03580 PE=4 SV=...	[more]
A0A067JZK6_JATCU	1.1e-40	57.71	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1	[more]
M1B5R3_SOLTU	1.4e-40	56.73	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1	[more]

BLAST of Lsi09G010360 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68490.1	9.4e-33	48.84	unknown protein	[more]
AT5G16110.1	2.2e-29	47.65	unknown protein	[more]
AT1G13390.1	1.9e-25	42.69	unknown protein	[more]
AT3G02555.1	3.6e-24	50.34	unknown protein	[more]

BLAST of Lsi09G010360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445146\|ref\|XP_004140334.1\|	8.2e-79	90.63	PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus]	[more]
gi\|659131635\|ref\|XP_008465783.1\|	1.5e-77	90.00	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]	[more]
gi\|1009155285\|ref\|XP_015895630.1\|	3.2e-43	58.10	PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba]	[more]
gi\|590693466\|ref\|XP_007044341.1\|	1.2e-42	58.38	Uncharacterized protein TCM_009867 [Theobroma cacao]	[more]
gi\|225423987\|ref\|XP_002282662.1\|	4.7e-42	60.47	PREDICTED: uncharacterized protein LOC100266248 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi09G010360.1	Lsi09G010360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 4..160 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi09G010360	Csa5G373190	Cucumber (Chinese Long) v2	culsiB326
Lsi09G010360	CSPI05G14020	Wild cucumber (PI 183967)	cpilsiB325
Lsi09G010360	Cucsa.248410	Cucumber (Gy14) v1	cgylsiB406
Lsi09G010360	CmaCh04G020460	Cucurbita maxima (Rimu)	cmalsiB623
Lsi09G010360	CmoCh04G021450	Cucurbita moschata (Rifu)	cmolsiB612
Lsi09G010360	CmoCh15G010330	Cucurbita moschata (Rifu)	cmolsiB257
Lsi09G010360	MELO3C003023	Melon (DHL92) v3.5.1	lsimeB007
Lsi09G010360	ClCG03G009560	Watermelon (Charleston Gray)	lsiwcgB015
Lsi09G010360	MELO3C003023.2	Melon (DHL92) v3.6.1	lsimedB007
Lsi09G010360	Cla97C03G060670	Watermelon (97103) v2	lsiwmbB014
Lsi09G010360	Bhi12G001146	Wax gourd	lsiwgoB020
Lsi09G010360	Cp4.1LG01g17850	Cucurbita pepo (Zucchini)	cpelsiB313
Lsi09G010360	CsGy5G014050	Cucumber (Gy14) v2	cgyblsiB298
Lsi09G010360	CsaV3_5G023120	Cucumber (Chinese Long) v3	cuclsiB349

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi09G010360	Watermelon (97103) v2	lsiwmbB027
Lsi09G010360	Wax gourd	lsiwgoB030
Lsi09G010360	Watermelon (Charleston Gray)	lsiwcgB030
Lsi09G010360	Watermelon (97103) v1	lsiwmB012