Cp4.1LG01g17850 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g17850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranslocase subunit seca
LocationCp4.1LG01 : 14234070 .. 14236082 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTCTTTTTCCTAAAGTTTTCATCTTTTATTTATTTATTTTTTTCTTACCTGAATTAATATTTCAAATTTCCTTAAAATATTATTGTAAGAAATTAAAATCACTGACCATATCTAAATTGTAGCATTAATCTTTTTAAAAATAGGCATTCAAATTTAATAATATTTTCCTTAAATAAATTAAAAAAAGGGGGTGAAGACAGAGGAAATCTCCCTGTCTCCTTCCCTATCTCTGTTTCTCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAATAATGTATTACCCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGACTTGCCCCATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGGTATTGTTTCTCTTCTGGCTTTTTTTTCTTTCACTCTGTTTCCTTCCATCTCAAACTTCCAATTTTCAGATCTCTGTACAACACCAATTACTTCCCACTTTCTTAACCTCTTGCATGATTCAGTTCAAAAAAAAGAAAGAAAAAAAAAATCTGATTTTTCTGCTACATCTATTGGGCGATTCGTTTTTTTGGGTTCTTTATTTTAATTTTTGTTTCTGTGAATTGGGTTTTTTTTTTTTTTTTTTTTTNTTCTTTTCTTTTCTTTTCTTGTTTGTGTTCAAGATGTGAACTTGAGCTGCTTGATTTTGATTTGTTTGACCAGATCTTGTTTTTCTCTTATATCTAATAAGGCTATACTCTTGTCCCTACTAACAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGTACATAATTTTGCAAAGCTATTAAAACTCAAATTGATCCAACAAGAGGATTATTAATTAATTTGTTCTTGTGTGCGGTTAACAGGAAGGTTGTGATTTGGAGAATTTTAACAGTACTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAGGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAACCTAACCAATGATGTGGATGAAGAAGAAAGAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGATGAGTTGAGGGTTGATTGAGAGAGAGAATAAAAGGCTGAGAGAGAGATTATTCATAGCAGCTTGTGAATGAGAAAACATGTACAAATGAAGCTGCAAATTGAGTATGAAACACAAGCATTCATATCTTAAATTTTCATTTCTCTTCTACACTTATGCTTTCATTTCTTACTTCTTCTACAAAATATATGACCCGTTTTTTGGAGATATTGTCTTTAGTCAATTTATGGAGATATTGTTAATTAGGTTTGTAAACGAGGCATGAACGCTTTCAGTCTTATCTGTGAAGGGTATCACCGTGTTCACTTTGATCCTCTTGATTCGCACTAGTTGGTCTTTCTTCAAACCGTA

mRNA sequence

CTTTTTCTTTTTCCTAAAGTTTTCATCTTTTATTTATTTATTTTTTTCTTACCTGAATTAATATTTCAAATTTCCTTAAAATATTATTGTAAGAAATTAAAATCACTGACCATATCTAAATTGTAGCATTAATCTTTTTAAAAATAGGCATTCAAATTTAATAATATTTTCCTTAAATAAATTAAAAAAAGGGGGTGAAGACAGAGGAAATCTCCCTGTCTCCTTCCCTATCTCTGTTTCTCTCTCTAGCTGTGCTTTGCTGTTGCCCAATAATAATGTATTACCCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGACTTGCCCCATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCTCGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGAAGGTTGTGATTTGGAGAATTTTAACAGTACTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAGGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAACCTAACCAATGATGTGGATGAAGAAGAAAGAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGATGAGTTGAGGGTTGATTGAGAGAGAGAATAAAAGGCTGAGAGAGAGATTATTCATAGCAGCTTGTGAATGAGAAAACATGTACAAATGAAGCTGCAAATTGAGTATGAAACACAAGCATTCATATCTTAAATTTTCATTTCTCTTCTACACTTATGCTTTCATTTCTTACTTCTTCTACAAAATATATGACCCGTTTTTTGGAGATATTGTCTTTAGTCAATTTATGGAGATATTGTTAATTAGGTTTGTAAACGAGGCATGAACGCTTTCAGTCTTATCTGTGAAGGGTATCACCGTGTTCACTTTGATCCTCTTGATTCGCACTAGTTGGTCTTTCTTCAAACCGTA

Coding sequence (CDS)

ATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGATGAGAGCTGCAGACACCGACCGCCGTGAACGACTGGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGAAGGTTGTGATTTGGAGAATTTTAACAGTACTAGTACACAATTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAAGGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATCCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAA

Protein sequence

MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA
Homology
[Close]
BLAST of Cp4.1LG01g17850 vs. TrEMBL
Match: A0A0A0KRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.6e-63
Identity = 125/158 (79.11%), Postives = 132/158 (83.54%), Query Frame = 1 

Query: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLEN 75
           E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF K GC LEN
Sbjct: 6   EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLEN 65

Query: 76  FNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTD 135
           FNS++ QLASSPPY CG+PPSRVANPLIQDARFG EKPK+LP+FSP  A PP SPPPS  
Sbjct: 66  FNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of Cp4.1LG01g17850 vs. TrEMBL
Match: A0A061E6F3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.9e-38
Identity = 100/193 (51.81%), Postives = 123/193 (63.73%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAAD------TDRRERLVCPKPRRLGLINTTVNDNP------ 60
           M Q A Q+N      E MR++       TDRRE +VCPKPRRL L+N T ND+P      
Sbjct: 1   MKQGASQQNAIGSSREEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRW 60

Query: 61  -FRHRF---DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQ 120
             RH+    DS A +D LD++  K GC +E    +  Q+ASSPP+  G+PPSRVANPLIQ
Sbjct: 61  QLRHQAELCDSKAGSDLLDMILTKGGCAVEQ---SCAQVASSPPFFSGSPPSRVANPLIQ 120

Query: 121 DARFGKEKPKMLPVFSPEVAPPP----YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRL 174
           DARFG EK     + +P ++PPP     S P S+ R GG +R NFGN PAVR+EGFDC L
Sbjct: 121 DARFGDEK-----IITP-MSPPPSGLSSSSPSSSSRKGGCIRVNFGNKPAVRVEGFDC-L 180

[Close]
BLAST of Cp4.1LG01g17850 vs. TrEMBL
Match: A0A067JZK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-37
Identity = 99/189 (52.38%), Postives = 122/189 (64.55%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAAD---TDRRERLVCPKPRRLGLINTTVNDNPFR------- 60
           MNQ A+Q   FS REE+  +     ++RR+ +VCPKPRRLG  N T +++P R       
Sbjct: 1   MNQCAIQPTAFSTREEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLS 60

Query: 61  HRF---DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDAR 120
           H+    DS A  D LD++  K G  +E    + TQ+ASSPP+ CG+PPSRVANPLIQDAR
Sbjct: 61  HQAELGDSKAGADLLDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGKEK-PKMLPVFSPEVAPPPYS--PPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRER 174
           FG EK   + P+    + PP  S   P S+ R GG VR NFGN PAVRIEGFDC LDR+R
Sbjct: 121 FGDEKLSPVSPLMPMPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDR 180

[Close]
BLAST of Cp4.1LG01g17850 vs. TrEMBL
Match: B9T053_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-37
Identity = 94/190 (49.47%), Postives = 119/190 (62.63%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAAD---TDRRERLVCPKPRRLGLINTTVNDNPFR------- 60
           M Q A+Q + FS REE+  +     ++RR+ +VCPKPRR GL N +VND+P R       
Sbjct: 1   MKQCAIQTSAFSTREEIRSSVSGTMSERRDPVVCPKPRRFGLFNASVNDHPVRSLRWHLS 60

Query: 61  HRFD---SVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDAR 120
           H+ +   S A ND LD++  K GC      S +   +S PP+ CG+PPSRVANPLIQDAR
Sbjct: 61  HQTEICESKAGNDLLDIILTKGGCYGVEQQSCTQVASSPPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGKEKPKMLPVFSPEVAPPP----YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRE 174
           FG+E+   +    P    PP     S P S+ R GG VR NFGN PAVR+EGFDC LDR+
Sbjct: 121 FGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKPAVRVEGFDC-LDRD 180

[Close]
BLAST of Cp4.1LG01g17850 vs. TrEMBL
Match: M1B5R3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-35
Identity = 94/187 (50.27%), Postives = 121/187 (64.71%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAADT--DRRERLVCPKPRRLGLINTTVND--NPFRHRF--- 60
           MN  A+Q+  F+  E+M  +  +  D+++ +VCPKPRRLGL+N T+ +   P R      
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPLRPLRWHVSHQ 60

Query: 61  ----DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFG 120
               DS A  D LD++  K G   +   S++ Q+ASSPP+ CG+PPSRV+NPLIQDARFG
Sbjct: 61  QELCDSRAGADLLDIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFG 120

Query: 121 KEKPKMLPVFSPEVAPPP---YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRN 174
            E  K+ PV SP   P P    S P ++ R GG VR NFGN PAVR+EGFDC LDR+RRN
Sbjct: 121 DE--KVTPV-SPRAIPIPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRN 180

[Close]
BLAST of Cp4.1LG01g17850 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30
Identity = 88/188 (46.81%), Postives = 111/188 (59.04%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRER----LVCPKPRRLGLINTTVNDNP-----FRH 60
           MN  AVQ N F+   ++ R++     ER    +VCPKPRR+GL N   + +      F H
Sbjct: 1   MNHFAVQPNAFAAGGDL-RSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSH 60

Query: 61  RFD---SVAANDALDLLFFKEGCDLENFNSTSTQLASSP-PYLCGTPPSRVANPLIQDAR 120
           + +   S A  D LD++  K+G   E  N    Q+  SP P+LCG+PPSRVANPL QDAR
Sbjct: 61  QLELCESKAETDILDIILTKDGYGAEQVNK---QVIDSPSPFLCGSPPSRVANPLTQDAR 120

Query: 121 FGKEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERR 174
           F  E   +  V  P++  PP  SP  S+ R GG  VR NFGN P VR+EGFDC LDR+ R
Sbjct: 121 FRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSR 180

[Close]
BLAST of Cp4.1LG01g17850 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein)

HSP 1 Score: 121.3 bits (303), Expect = 5.8e-28
Identity = 84/187 (44.92%), Postives = 105/187 (56.15%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MN   +Q+N F  REEMM     DR++ +VCPKPRR+GL+   V   P R      AA  
Sbjct: 67  MNHCNLQQNAFMSREEMM---GFDRKDLVVCPKPRRVGLLANNVI-RPLRLHMSQAAA-- 126

Query: 61  ALDLLFFKEGCDL-------ENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKP 120
             DL   K G +L       E+  +    L+SSPPY  G+PPSR ANPL QDARF  EK 
Sbjct: 127 --DLCDSKAGAELLEIIRRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKL 186

Query: 121 KMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRN 174
             +   SP + P      P  S   S+  + G VR  FG N PAVR+EGFDC L+R+R+N
Sbjct: 187 NPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQN 244

[Close]
BLAST of Cp4.1LG01g17850 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein)

HSP 1 Score: 101.7 bits (252), Expect = 4.7e-22
Identity = 73/184 (39.67%), Postives = 103/184 (55.98%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRFDSV 60
           MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+ +  
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  AAN---DALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKP 120
            +N   + LD +  K G      + T T + + P +  G+PPSRV+NPL +D+ F +E  
Sbjct: 62  ESNSGSEILDFILTKGGGGGGEQDQTRTVM-TPPLFFTGSPPSRVSNPLTKDSLFREE-- 121

Query: 121 KMLPVFSPEVAPPPYSPP--PSTDRNGGWVRP--NFGNIPAVRIEGFDCRLDRERRNRSI 174
            +L V SP  + P  + P  PS+ RNG  V    +FGN P VR+ GFDC  DR   NRSI
Sbjct: 122 -LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSI 176

[Close]
BLAST of Cp4.1LG01g17850 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-21
Identity = 75/177 (42.37%), Postives = 95/177 (53.67%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAADTDRR--ERLVCPKPRRLGLINTTVNDNPFRHRFDSVAA 60
           MN  ++Q+N F  REE            + +VCPKPRR    N  +   PFR  F    A
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRRA---NNVIR--PFRLHFSLSGA 60

Query: 61  NDALDLLFFKEGCDL-ENFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLP 120
           +D  D    K G DL + F    +  + SPP+  G+PPSR ANPL QDARFG EK   L 
Sbjct: 61  DDVCDS---KAGEDLLDIFRRKESVSSRSPPFFLGSPPSRAANPLAQDARFGDEK---LN 120

Query: 121 VFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA 174
             SP ++P     P ++    G  R  FG  PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 121 TVSPSLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDC-LNRDRPNSSIPAMA 162

[Close]
BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: gi|449445146|ref|XP_004140334.1| (PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus])

HSP 1 Score: 249.2 bits (635), Expect = 5.2e-63
Identity = 125/158 (79.11%), Postives = 132/158 (83.54%), Query Frame = 1 

Query: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLEN 75
           E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF K GC LEN
Sbjct: 6   EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLEN 65

Query: 76  FNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTD 135
           FNS++ QLASSPPY CG+PPSRVANPLIQDARFG EKPK+LP+FSP  A PP SPPPS  
Sbjct: 66  FNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: gi|659131635|ref|XP_008465783.1| (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 246.9 bits (629), Expect = 2.6e-62
Identity = 124/158 (78.48%), Postives = 132/158 (83.54%), Query Frame = 1 

Query: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLEN 75
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF K GC LE 
Sbjct: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65

Query: 76  FNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTD 135
           FNS++TQLASS PY CG+PPSRVANPLIQDARFG EKPK+LP+FS   A PP SPPPS  
Sbjct: 66  FNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAG 125

Query: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]
BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: gi|1009155285|ref|XP_015895630.1| (PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba])

HSP 1 Score: 176.8 bits (447), Expect = 3.3e-41
Identity = 105/191 (54.97%), Postives = 130/191 (68.06%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFR-------HRF 60
           MNQ  +Q+NVFSV EEM R++  DRR+ +VCPKPRRLGL+N+ V+D+P R       H+ 
Sbjct: 1   MNQCGIQQNVFSVCEEM-RSSSMDRRDPVVCPKPRRLGLLNSAVHDHPIRSFRWHISHQA 60

Query: 61  ---DSVAANDALDLLFFKEGCDLE-NFNSTSTQLASSPPYLCGTPPSRVANPLIQDARFG 120
              DS A ++ LD++  K G  +E   +S +TQ+ASSPP+ CG+PPSRVANPLIQDARFG
Sbjct: 61  EPCDSRARSELLDIILTKGGYGVEVEQSSCTTQIASSPPFFCGSPPSRVANPLIQDARFG 120

Query: 121 KEKPKMLPVFSPEVAPP-------PYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDR 174
            EK       SP + PP       P +   S+ R GG VR NFGN PAVRIEGFDC LDR
Sbjct: 121 DEKAAPFSPLSP-IPPPNGISSASPSAAATSSARKGGCVRANFGNKPAVRIEGFDC-LDR 180

[Close]
BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: gi|590693466|ref|XP_007044341.1| (Uncharacterized protein TCM_009867 [Theobroma cacao])

HSP 1 Score: 165.2 bits (417), Expect = 9.9e-38
Identity = 100/193 (51.81%), Postives = 123/193 (63.73%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAAD------TDRRERLVCPKPRRLGLINTTVNDNP------ 60
           M Q A Q+N      E MR++       TDRRE +VCPKPRRL L+N T ND+P      
Sbjct: 1   MKQGASQQNAIGSSREEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRW 60

Query: 61  -FRHRF---DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQ 120
             RH+    DS A +D LD++  K GC +E    +  Q+ASSPP+  G+PPSRVANPLIQ
Sbjct: 61  QLRHQAELCDSKAGSDLLDMILTKGGCAVEQ---SCAQVASSPPFFSGSPPSRVANPLIQ 120

Query: 121 DARFGKEKPKMLPVFSPEVAPPP----YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRL 174
           DARFG EK     + +P ++PPP     S P S+ R GG +R NFGN PAVR+EGFDC L
Sbjct: 121 DARFGDEK-----IITP-MSPPPSGLSSSSPSSSSRKGGCIRVNFGNKPAVRVEGFDC-L 180

[Close]
BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match: gi|802681309|ref|XP_012082096.1| (PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas])

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 99/189 (52.38%), Postives = 122/189 (64.55%), Query Frame = 1 

Query: 1   MNQVAVQRNVFSVREEMMRAAD---TDRRERLVCPKPRRLGLINTTVNDNPFR------- 60
           MNQ A+Q   FS REE+  +     ++RR+ +VCPKPRRLG  N T +++P R       
Sbjct: 1   MNQCAIQPTAFSTREEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLS 60

Query: 61  HRF---DSVAANDALDLLFFKEGCDLENFNSTSTQLASSPPYLCGTPPSRVANPLIQDAR 120
           H+    DS A  D LD++  K G  +E    + TQ+ASSPP+ CG+PPSRVANPLIQDAR
Sbjct: 61  HQAELGDSKAGADLLDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGKEK-PKMLPVFSPEVAPPPYS--PPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRER 174
           FG EK   + P+    + PP  S   P S+ R GG VR NFGN PAVRIEGFDC LDR+R
Sbjct: 121 FGDEKLSPVSPLMPMPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDR 180

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g17850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g17850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRF1_CUCSA3.6e-6379.11Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1[more]
A0A061E6F3_THECC6.9e-3851.81Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1[more]
A0A067JZK6_JATCU1.5e-3752.38Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1[more]
B9T053_RICCO3.4e-3749.47Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1[more]
M1B5R3_SOLTU1.4e-3550.27Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1[more]
BLAST of Cp4.1LG01g17850 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G68490.11.2e-3046.81 unknown protein[more]
AT5G16110.15.8e-2844.92 unknown protein[more]
AT1G13390.14.7e-2239.67 unknown protein[more]
AT3G02555.11.4e-2142.37 unknown protein[more]
BLAST of Cp4.1LG01g17850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445146|ref|XP_004140334.1|5.2e-6379.11PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus][more]
gi|659131635|ref|XP_008465783.1|2.6e-6278.48PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo][more]
gi|1009155285|ref|XP_015895630.1|3.3e-4154.97PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba][more]
gi|590693466|ref|XP_007044341.1|9.9e-3851.81Uncharacterized protein TCM_009867 [Theobroma cacao][more]
gi|802681309|ref|XP_012082096.1|2.2e-3752.38PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g17850.1Cp4.1LG01g17850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33384FAMILY NOT NAMEDcoord: 1..173
score: 9.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g17850Cucsa.283530Cucumber (Gy14) v1cgycpeB0753
Cp4.1LG01g17850CmaCh04G020460Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g17850CmoCh15G010330Cucurbita moschata (Rifu)cmocpeB286
Cp4.1LG01g17850CmoCh04G021450Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g17850Cla020401Watermelon (97103) v1cpewmB430
Cp4.1LG01g17850Csa5G373190Cucumber (Chinese Long) v2cpecuB436
Cp4.1LG01g17850MELO3C003023Melon (DHL92) v3.5.1cpemeB352
Cp4.1LG01g17850MELO3C012253Melon (DHL92) v3.5.1cpemeB375
Cp4.1LG01g17850ClCG03G009560Watermelon (Charleston Gray)cpewcgB381
Cp4.1LG01g17850ClCG05G022670Watermelon (Charleston Gray)cpewcgB391
Cp4.1LG01g17850CSPI05G14020Wild cucumber (PI 183967)cpecpiB435
Cp4.1LG01g17850Lsi09G010360Bottle gourd (USVL1VR-Ls)cpelsiB313
Cp4.1LG01g17850MELO3C012253.2Melon (DHL92) v3.6.1cpemedB432
Cp4.1LG01g17850MELO3C003023.2Melon (DHL92) v3.6.1cpemedB413
Cp4.1LG01g17850CsaV3_5G023120Cucumber (Chinese Long) v3cpecucB0530
Cp4.1LG01g17850CsaV3_5G034370Cucumber (Chinese Long) v3cpecucB0563
Cp4.1LG01g17850Bhi07G001099Wax gourdcpewgoB0566
Cp4.1LG01g17850CsGy5G024770Cucumber (Gy14) v2cgybcpeB665
Cp4.1LG01g17850CsGy5G014050Cucumber (Gy14) v2cgybcpeB639
Cp4.1LG01g17850Carg01844Silver-seed gourdcarcpeB1180
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g17850Cucumber (Chinese Long) v3cpecucB0535
Cp4.1LG01g17850Wax gourdcpewgoB0574
Cp4.1LG01g17850Cucurbita pepo (Zucchini)cpecpeB037
Cp4.1LG01g17850Cucumber (Gy14) v1cgycpeB0757
Cp4.1LG01g17850Cucurbita maxima (Rimu)cmacpeB436
Cp4.1LG01g17850Cucurbita moschata (Rifu)cmocpeB400
Cp4.1LG01g17850Wild cucumber (PI 183967)cpecpiB429
Cp4.1LG01g17850Cucumber (Chinese Long) v2cpecuB434
Cp4.1LG01g17850Watermelon (Charleston Gray)cpewcgB400
Cp4.1LG01g17850Watermelon (97103) v1cpewmB439
Cp4.1LG01g17850Melon (DHL92) v3.5.1cpemeB387
Cp4.1LG01g17850Cucumber (Gy14) v2cgybcpeB640
Cp4.1LG01g17850Silver-seed gourdcarcpeB1450