CmoCh15G010330 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G010330
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	1-deoxy-D-xylulose-5-phosphate synthase 2
Location	Cmo_Chr15 : 6271507 .. 6272084 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGGGATTCTACTCTTCCTAATTGCAACAAAATGAACAAGATGGTGGTTCAACACAATGCGTTTTCAGTTCATGACGACATGCTCAACGCCTCCGCCGTCGACGAACGACTGGTTTGCCCAAAACCCCGCCGTCTCGGTTCCATCAACGTCCGTCCTTTTCAATCAGATGCTTTGGAACTCCTCTTCTTAAAGGTACGTAATTTTGGGTTCAAATTCCTTATTCAATAAAACAATTTTTATTCGATCTTTTTCTTTTTCCAGGGTGGTTGTGGATTGGAGAGTTTTAACAGTAGTGGTACAGAATTAGCCTCGTCGCCGCCGTTTTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCATTAATCCAAGACGATCGATTTGGGGATGAGAAGCCGAAGGTGTTTCCCCTCTTCTCGTCAGCGCCTCCTTCTCCGTCGTCGCCTCCGCCGTCAACTGGTCGGACAGGCGGATGTGTTCGGGTTAATTTTGGAAACAACCCGGCGGTGAGAATTGAGGGGTTTGAATGCCGGCTCGATAGGGAGAGGCGAAACCGCAGCGTTGCAGCTCTGGCTTAG

mRNA sequence

CAGGGGATTCTACTCTTCCTAATTGCAACAAAATGAACAAGATGGTGGTTCAACACAATGCGTTTTCAGTTCATGACGACATGCTCAACGCCTCCGCCGTCGACGAACGACTGGTTTGCCCAAAACCCCGCCGTCTCGGTTCCATCAACGTCCGTCCTTTTCAATCAGATGCTTTGGAACTCCTCTTCTTAAAGGGTGGTTGTGGATTGGAGAGTTTTAACAGTAGTGGTACAGAATTAGCCTCGTCGCCGCCGTTTTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCATTAATCCAAGACGATCGATTTGGGGATGAGAAGCCGAAGGTGTTTCCCCTCTTCTCGTCAGCGCCTCCTTCTCCGTCGTCGCCTCCGCCGTCAACTGGTCGGACAGGCGGATGTGTTCGGGTTAATTTTGGAAACAACCCGGCGGTGAGAATTGAGGGGTTTGAATGCCGGCTCGATAGGGAGAGGCGAAACCGCAGCGTTGCAGCTCTGGCTTAG

Coding sequence (CDS)

ATGAACAAGATGGTGGTTCAACACAATGCGTTTTCAGTTCATGACGACATGCTCAACGCCTCCGCCGTCGACGAACGACTGGTTTGCCCAAAACCCCGCCGTCTCGGTTCCATCAACGTCCGTCCTTTTCAATCAGATGCTTTGGAACTCCTCTTCTTAAAGGGTGGTTGTGGATTGGAGAGTTTTAACAGTAGTGGTACAGAATTAGCCTCGTCGCCGCCGTTTTTTTGTGGGTCGCCGCCGAGCAGAGTAGCTAACCCATTAATCCAAGACGATCGATTTGGGGATGAGAAGCCGAAGGTGTTTCCCCTCTTCTCGTCAGCGCCTCCTTCTCCGTCGTCGCCTCCGCCGTCAACTGGTCGGACAGGCGGATGTGTTCGGGTTAATTTTGGAAACAACCCGGCGGTGAGAATTGAGGGGTTTGAATGCCGGCTCGATAGGGAGAGGCGAAACCGCAGCGTTGCAGCTCTGGCTTAG

Homology

[Close]

BLAST of CmoCh15G010330 vs. TrEMBL
Match: A0A0A0KRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.3e-54
Identity = 108/142 (76.06%), Postives = 116/142 (81.69%), Query Frame = 1


Query: 25  ERLVCPKPRRLGSINV--------RPFQSDALELLFLKGGCGLESFNSSGTELASSPPFF 84
           ER+VCPKPRRLG IN           F SDAL+LLFLKGGCGLE+FNSS  +LASSPP+F
Sbjct: 17  ERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYF 76

Query: 85  CGSPPSRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAV 144
           CGSPPSRVANPLIQD RFGDEKPK+ PLFS A   P SPPPS GR GGCVRVNFG NPAV
Sbjct: 77  CGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAV 136

Query: 145 RIEGFECRLDRERRNRSVAALA 159
           RIEGF+CRLDRERRNRS+ ALA
Sbjct: 137 RIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmoCh15G010330 vs. TrEMBL
Match: M1B5R3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 8.5e-35
Identity = 92/186 (49.46%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNA-SAVDER---LVCPKPRRLGSIN------VRPFQ------ 60
           MN   +Q  AF+  +DM ++ S++ ++   +VCPKPRRLG +N      +RP +      
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPLRPLRWHVSHQ 60

Query: 61  ---------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFG 120
                    +D L+++  KGG G +   SS  ++ASSPPFFCGSPPSRV+NPLIQD RFG
Sbjct: 61  QELCDSRAGADLLDIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFG 120

Query: 121 DEKPKVFPLFSSAPPSPS---SPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNR 159
           DE  KV P+   A P PS   S P ++ R GGCVR NFGNNPAVR+EGF+C LDR+RRN 
Sbjct: 121 DE--KVTPVSPRAIPIPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRNC 180

[Close]

BLAST of CmoCh15G010330 vs. TrEMBL
Match: A0A0V0I186_SOLCH (Putative translocase subunit seca-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 91/186 (48.92%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNA-SAVDER---LVCPKPRRLGSIN------VRPFQ------ 60
           MN   +Q  AF+  +DM ++ S++ ++   +VCPKPRRLG +N      +RP +      
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPIRPLRWHVSNQ 60

Query: 61  ---------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFG 120
                    ++ L+++  KGG G +   SS  ++ASSPPFFCGSPPSRV+NPLIQD RFG
Sbjct: 61  QELCDSRAGAELLDIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFG 120

Query: 121 DEKPKVFPLFSSAPPSPS---SPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNR 159
           DE  KV P+   A P PS   S P ++ R GGCVR NFGNNPAVR+EGF+C LDR+RRN 
Sbjct: 121 DE--KVTPVSPRAIPIPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRNC 180

[Close]

BLAST of CmoCh15G010330 vs. TrEMBL
Match: K4BXB0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 91/186 (48.92%), Postives = 119/186 (63.98%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNA-SAVDER---LVCPKPRRLGSIN------VRPFQ------ 60
           MN   +Q  AF+  +DM ++ S++ ++   +VCPKPRRLG +N      +RP +      
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPIRPLRWHVSHQ 60

Query: 61  ---------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFG 120
                    +D L+++  KGG G +   SS  ++ASSPPFFCGSPPSRV+NPLIQD RFG
Sbjct: 61  QELCDSRAGADLLDIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFG 120

Query: 121 DEKPKVFPLFSSAPPSPS---SPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNR 159
           DE  KV P+   A P PS   S P ++ R GGCVR NFGNNPAVR+EGF+C LDR+RRN 
Sbjct: 121 DE--KVTPVSPRAIPIPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRNC 180

[Close]

BLAST of CmoCh15G010330 vs. TrEMBL
Match: A0A067JZK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-34
Identity = 94/189 (49.74%), Postives = 115/189 (60.85%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNASAVD-----ERLVCPKPRRLGSINVRPFQ----------- 60
           MN+  +Q  AFS  +++ ++  V      + +VCPKPRRLG  N    +           
Sbjct: 1   MNQCAIQPTAFSTREEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLS 60

Query: 61  -----------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDR 120
                      +D L+++  KGG G+E    S T++ASSPPFFCGSPPSRVANPLIQD R
Sbjct: 61  HQAELGDSKAGADLLDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGDEK-PKVFPLFSS--APPSPSSP-PPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRER 159
           FGDEK   V PL      PPS SSP P S+ R GGCVR NFGN PAVRIEGF+C LDR+R
Sbjct: 121 FGDEKLSPVSPLMPMPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDR 180

[Close]

BLAST of CmoCh15G010330 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 4.8e-29
Identity = 86/187 (45.99%), Postives = 108/187 (57.75%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNAS-AVDER----LVCPKPRRLG--------SINVRPF---- 60
           MN   VQ NAF+   D+ ++S +V ER    +VCPKPRR+G        S ++R +    
Sbjct: 1   MNHFAVQPNAFAAGGDLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQ 60

Query: 61  --------QSDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFG 120
                   ++D L+++  K G G E  N    +  S  PF CGSPPSRVANPL QD RF 
Sbjct: 61  LELCESKAETDILDIILTKDGYGAEQVNKQVID--SPSPFLCGSPPSRVANPLTQDARFR 120

Query: 121 DE---KPKVFPLFSSAPPSPSSPPPSTGRTGGC-VRVNFGNNPAVRIEGFECRLDRERRN 159
           DE      V P     PPS SSP  S+GR GGC VR NFGN+P VR+EGF+C LDR+ RN
Sbjct: 121 DEIVSVSSVIPPQLGLPPS-SSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSRN 180

[Close]

BLAST of CmoCh15G010330 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 8.4e-26
Identity = 78/181 (43.09%), Postives = 105/181 (58.01%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNASAVDERLVCPKPRRLGSIN---VRPFQ----SDALELLFL 60
           MN   +Q NAF   ++M+     D  +VCPKPRR+G +    +RP +      A +L   
Sbjct: 67  MNHCNLQQNAFMSREEMMGFDRKD-LVVCPKPRRVGLLANNVIRPLRLHMSQAAADLCDS 126

Query: 61  KGGCGL-------ESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFGDEK-------- 120
           K G  L       E   + G  L+SSPP+F GSPPSR ANPL QD RF DEK        
Sbjct: 127 KAGAELLEIIRRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNS 186

Query: 121 PKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFG-NNPAVRIEGFECRLDRERRNRSVAAL 159
           P + P  ++  PSPSS   S+  + GCVR+ FG N+PAVR+EGF+C L+R+R+N S+ A+
Sbjct: 187 PFLQPYSATGFPSPSS-SSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAM 244

[Close]

BLAST of CmoCh15G010330 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-23
Identity = 72/187 (38.50%), Postives = 100/187 (53.48%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNASAVDER---LVCPKPRRLGSINVRPFQS------------ 60
           MN   +Q NAF   ++M   +AV +R   ++CPKPRR+G++N    +S            
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  ------DALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFGDEKP 120
                 + L+ +  KGG G    + + T + + P FF GSPPSRV+NPL +D  F +E  
Sbjct: 62  ESNSGSEILDFILTKGGGGGGEQDQTRTVM-TPPLFFTGSPPSRVSNPLTKDSLFREE-- 121

Query: 121 KVFPLFSSAPPSPSSP------PPSTGRTGGCV--RVNFGNNPAVRIEGFECRLDRERRN 159
               L   A PSPS+P      PPS+ R G CV    +FGNNP VR+ GF+C  DR   N
Sbjct: 122 ----LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSN 176

[Close]

BLAST of CmoCh15G010330 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein)

HSP 1 Score: 101.3 bits (251), Expect = 5.6e-22
Identity = 73/171 (42.69%), Postives = 97/171 (56.73%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDM-----LNASAVDERLVCPKPRRLGSINVRPFQ-----SDALEL 60
           MN   +Q NAF   ++      + +  VD  +VCPKPRR  ++ +RPF+     S A ++
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDS-VVCPKPRRANNV-IRPFRLHFSLSGADDV 60

Query: 61  LFLKGGCGL-ESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFGDEKPKVFPLFSSAP 120
              K G  L + F    +  + SPPFF GSPPSR ANPL QD RFGDEK       ++  
Sbjct: 61  CDSKAGEDLLDIFRRKESVSSRSPPFFLGSPPSRAANPLAQDARFGDEK------LNTVS 120

Query: 121 PSPSSPPPSTGRT-GGCVRVNFGNNPA-VRIEGFECRLDRERRNRSVAALA 159
           PS S   PS  R   GC R+ FG  PA VR+EGF+C L+R+R N S+ A+A
Sbjct: 121 PSLSPLLPSASRVKSGCGRMKFGVKPATVRVEGFDC-LNRDRPNSSIPAMA 162

[Close]

BLAST of CmoCh15G010330 vs. NCBI nr
Match: gi|659131635|ref|XP_008465783.1| (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 3.1e-54
Identity = 110/151 (72.85%), Postives = 122/151 (80.79%), Query Frame = 1


Query: 18  LNASAVD--ERLVCPKPRRLGSINV--------RPFQSDALELLFLKGGCGLESFNSSGT 77
           + ++A D  ER+VCPKPRRLG IN           F SDA++LLFLKGGCGLE FNSS T
Sbjct: 8   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 67

Query: 78  ELASSPPFFCGSPPSRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSPPPSTGRTGGCVR 137
           +LASS P+FCGSPPSRVANPLIQD RFGDEKPK+ PLFS+A   P SPPPS GR GGCVR
Sbjct: 68  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 127

Query: 138 VNFGNNPAVRIEGFECRLDRERRNRSVAALA 159
           VNFGNNPAVRIEGF+CRLDRERRNRS+ ALA
Sbjct: 128 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmoCh15G010330 vs. NCBI nr
Match: gi|449445146|ref|XP_004140334.1| (PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus])

HSP 1 Score: 218.4 bits (555), Expect = 9.0e-54
Identity = 108/142 (76.06%), Postives = 116/142 (81.69%), Query Frame = 1


Query: 25  ERLVCPKPRRLGSINV--------RPFQSDALELLFLKGGCGLESFNSSGTELASSPPFF 84
           ER+VCPKPRRLG IN           F SDAL+LLFLKGGCGLE+FNSS  +LASSPP+F
Sbjct: 17  ERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYF 76

Query: 85  CGSPPSRVANPLIQDDRFGDEKPKVFPLFSSAPPSPSSPPPSTGRTGGCVRVNFGNNPAV 144
           CGSPPSRVANPLIQD RFGDEKPK+ PLFS A   P SPPPS GR GGCVRVNFG NPAV
Sbjct: 77  CGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAV 136

Query: 145 RIEGFECRLDRERRNRSVAALA 159
           RIEGF+CRLDRERRNRS+ ALA
Sbjct: 137 RIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmoCh15G010330 vs. NCBI nr
Match: gi|1009155285|ref|XP_015895630.1| (PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba])

HSP 1 Score: 162.5 bits (410), Expect = 5.9e-37
Identity = 98/190 (51.58%), Postives = 121/190 (63.68%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNASAVDER--LVCPKPRRLGSIN-------VRPFQ------- 60
           MN+  +Q N FSV ++M  +S++D R  +VCPKPRRLG +N       +R F+       
Sbjct: 1   MNQCGIQQNVFSVCEEM-RSSSMDRRDPVVCPKPRRLGLLNSAVHDHPIRSFRWHISHQA 60

Query: 61  --------SDALELLFLKGGCGLESFNSS-GTELASSPPFFCGSPPSRVANPLIQDDRFG 120
                   S+ L+++  KGG G+E   SS  T++ASSPPFFCGSPPSRVANPLIQD RFG
Sbjct: 61  EPCDSRARSELLDIILTKGGYGVEVEQSSCTTQIASSPPFFCGSPPSRVANPLIQDARFG 120

Query: 121 DEKPKVFPLFSSAPP-------SPSSPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRE 159
           DEK   F   S  PP       SPS+   S+ R GGCVR NFGN PAVRIEGF+C LDR+
Sbjct: 121 DEKAAPFSPLSPIPPPNGISSASPSAAATSSARKGGCVRANFGNKPAVRIEGFDC-LDRD 180

[Close]

BLAST of CmoCh15G010330 vs. NCBI nr
Match: gi|565354472|ref|XP_006344134.1| (PREDICTED: uncharacterized protein LOC102605157 [Solanum tuberosum])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 92/186 (49.46%), Postives = 120/186 (64.52%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNA-SAVDER---LVCPKPRRLGSIN------VRPFQ------ 60
           MN   +Q  AF+  +DM ++ S++ ++   +VCPKPRRLG +N      +RP +      
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPLRPLRWHVSHQ 60

Query: 61  ---------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDRFG 120
                    +D L+++  KGG G +   SS  ++ASSPPFFCGSPPSRV+NPLIQD RFG
Sbjct: 61  QELCDSRAGADLLDIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFG 120

Query: 121 DEKPKVFPLFSSAPPSPS---SPPPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRERRNR 159
           DE  KV P+   A P PS   S P ++ R GGCVR NFGNNPAVR+EGF+C LDR+RRN 
Sbjct: 121 DE--KVTPVSPRAIPIPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRNC 180

[Close]

BLAST of CmoCh15G010330 vs. NCBI nr
Match: gi|802681309|ref|XP_012082096.1| (PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas])

HSP 1 Score: 154.1 bits (388), Expect = 2.1e-34
Identity = 94/189 (49.74%), Postives = 115/189 (60.85%), Query Frame = 1


Query: 1   MNKMVVQHNAFSVHDDMLNASAVD-----ERLVCPKPRRLGSINVRPFQ----------- 60
           MN+  +Q  AFS  +++ ++  V      + +VCPKPRRLG  N    +           
Sbjct: 1   MNQCAIQPTAFSTREEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLS 60

Query: 61  -----------SDALELLFLKGGCGLESFNSSGTELASSPPFFCGSPPSRVANPLIQDDR 120
                      +D L+++  KGG G+E    S T++ASSPPFFCGSPPSRVANPLIQD R
Sbjct: 61  HQAELGDSKAGADLLDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGDEK-PKVFPLFSS--APPSPSSP-PPSTGRTGGCVRVNFGNNPAVRIEGFECRLDRER 159
           FGDEK   V PL      PPS SSP P S+ R GGCVR NFGN PAVRIEGF+C LDR+R
Sbjct: 121 FGDEKLSPVSPLMPMPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDR 180

The following BLAST results are available for this feature:

BLAST of CmoCh15G010330 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh15G010330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF1_CUCSA	6.3e-54	76.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1	[more]
M1B5R3_SOLTU	8.5e-35	49.46	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1	[more]
A0A0V0I186_SOLCH	1.5e-34	48.92	Putative translocase subunit seca-like OS=Solanum chacoense PE=4 SV=1	[more]
K4BXB0_SOLLC	1.5e-34	48.92	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]
A0A067JZK6_JATCU	1.5e-34	49.74	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1	[more]

BLAST of CmoCh15G010330 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68490.1	4.8e-29	45.99	unknown protein	[more]
AT5G16110.1	8.4e-26	43.09	unknown protein	[more]
AT1G13390.1	3.9e-23	38.50	unknown protein	[more]
AT3G02555.1	5.6e-22	42.69	unknown protein	[more]

BLAST of CmoCh15G010330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131635\|ref\|XP_008465783.1\|	3.1e-54	72.85	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]	[more]
gi\|449445146\|ref\|XP_004140334.1\|	9.0e-54	76.06	PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus]	[more]
gi\|1009155285\|ref\|XP_015895630.1\|	5.9e-37	51.58	PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba]	[more]
gi\|565354472\|ref\|XP_006344134.1\|	1.2e-34	49.46	PREDICTED: uncharacterized protein LOC102605157 [Solanum tuberosum]	[more]
gi\|802681309\|ref\|XP_012082096.1\|	2.1e-34	49.74	PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G010330.1	CmoCh15G010330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 1..158 score: 2.6
None	No IPR available	PANTHER	PTHR33384:SF1	SUBFAMILY NOT NAMED	coord: 1..158 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G010330	CmaCh04G020460	Cucurbita maxima (Rimu)	cmacmoB698
CmoCh15G010330	MELO3C003023	Melon (DHL92) v3.5.1	cmomeB251
CmoCh15G010330	ClCG03G009560	Watermelon (Charleston Gray)	cmowcgB249
CmoCh15G010330	Lsi09G010360	Bottle gourd (USVL1VR-Ls)	cmolsiB257
CmoCh15G010330	Cp4.1LG01g17850	Cucurbita pepo (Zucchini)	cmocpeB286
CmoCh15G010330	MELO3C003023.2	Melon (DHL92) v3.6.1	cmomedB284
CmoCh15G010330	Cla97C03G060670	Watermelon (97103) v2	cmowmbB282
CmoCh15G010330	Carg27853	Silver-seed gourd	carcmoB0895

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G010330	CmoCh04G021450	Cucurbita moschata (Rifu)	cmocmoB270

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G010330	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G010330	Cucurbita pepo (Zucchini)	cmocpeB268