CmoCh04G021450 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G021450
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	1-deoxy-D-xylulose-5-phosphate synthase 2
Location	Cmo_Chr04 : 14964484 .. 14966865 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTGTTGCCCAATAATGTATTACCCTCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGCCTTGCCCCATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCAAGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGGTATTGTTTCTCTTCTGGGTTTTTTCTTTTACTCTGTTTCTTATTGCTTTTAACTTCCATCTCAAACTTCCAATTTTCAGATCTCTGTACAACACCAATTACTTCCCACTTTCTTAACCTCTTGCATGATTCAGTTCAAAAAAAAGAAAAAAAATACCTGATTTTTGTGCTAGATCTATTGGGCGATTCCTTTTTTTGGGTTCTTGATTTTAATTTTTGTTTCTGTGAATTGGGTTTTTTTTTTTTTTTTTTCTTCTTGTTTGTGTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTCTTCTTGTTTGTGTTCAAGATGTGAACTTGAGCTGCTTGATTTTGATTTGTTTGACCAGATCTTGTTTTTCTCTTATATCTAATAAGGCTATACTCTTGTCCGTACTAACAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGACGAGAGCTGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGTACATAATTTTGCAAAGCTATTAAAACTCAAATTGATCCAACAAGAGGATTATTAATTAATTTGTTCTTGTGTGCGGTTAACAGGGAGGTTGTGATTTGGAGAATTTTAACAGTAGTAGTACACAGTTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAACCTAACCGATTTGAGGGGAGCCGATCCAATGATGTGGATGAAGAAGAAAAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGTTGAGTTGAGGGTTGATTGAGAGAGAGAGAGAGAGAGAGAG

mRNA sequence

TGCTGTTGCCCAATAATGTATTACCCTCTTTTCTCTCTCTGCTCCTTTTAATTTAATTTAATTTAATAATTAAGAAATCTGATTCTCATGTCGCCTTGCCCCATCTTATAACACGCTCCTCGTCTCCTTCCCCTTCCTTCCTCCCCTTTTTCTCTTTCCGCTCAACATTTTCAAGGGAAAATTCATCTCTGCTTACACTCCCTTTCCCTTCAGAGAGAAAAAAGAATCAAAAAGGAAGAAGATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGACGAGAGCTGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGGAGGTTGTGATTTGGAGAATTTTAACAGTAGTAGTACACAGTTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAATAAAAACCTAACCGATTTGAGGGGAGCCGATCCAATGATGTGGATGAAGAAGAAAAAAACATTTTTTTCTACAAATTAAAAAATTGAAATTTAGAAAAAGGAAGGTTTTTGAGAAAAACACCATTATTGTATATAACGTGGAAAGGAAATGAAAGTAAATATTATGTGAAGGAAAAGAGGGCGTTGTTAGGTTTGTGTCTATTTAGTTGAGTTGAGGGTTGATTGAGAGAGAGAGAGAGAGAGAGAG

Coding sequence (CDS)

ATGAACCAGGTGGCGGTTCAACGGAACGTGTTTTCAGTGCGTGAAGAGATGACGAGAGCTGCAGACACCGACCGCCGTGAACGACTTGTTTGCCCAAAGCCTCGCCGTCTCGGACTCATTAACACCACCGTCAACGACAACCCATTTAGACATCGTTTTGATTCCGTAGCTGCTAATGATGCTTTGGATCTTCTCTTCTTTAAGGGAGGTTGTGATTTGGAGAATTTTAACAGTAGTAGTACACAGTTAGCCTCGTCGCCGCCGTATTTATGTGGGACGCCGCCCAGCAGAGTAGCTAACCCATTAATCCAAGACGCTAGATTTGGGAACGAGAAGCCAAAGATGCTCCCCGTCTTCTCGCCGGAGGTGGCTCCTCCTCCGTATTCGCCGCCTCCATCAACCGATCGGAATGGCGGCTGGGTTCGACCAAACTTCGGAAACATTCCAGCGGTGAGAATCGAGGGGTTCGATTGCCGTCTGGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAA

Homology

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BLAST of CmoCh04G021450 vs. TrEMBL
Match: A0A0A0KRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-64
Identity = 130/161 (80.75%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 13  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD 72
           V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC 
Sbjct: 4   VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCG 63

Query: 73  LENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPP 132
           LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPP
Sbjct: 64  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPLSPPP 123

Query: 133 STDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           S  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 124 SAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmoCh04G021450 vs. TrEMBL
Match: A0A061E6F3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.6e-39
Identity = 104/193 (53.89%), Postives = 126/193 (65.28%), Query Frame = 1


Query: 1   MNQVAVQRNVF-SVREEMTRAAD-----TDRRERLVCPKPRRLGLINTTVNDNP------ 60
           M Q A Q+N   S REEM  +       TDRRE +VCPKPRRL L+N T ND+P      
Sbjct: 1   MKQGASQQNAIGSSREEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRW 60

Query: 61  -FRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQ 120
             RH+    DS A +D LD++  KGGC +E    S  Q+ASSPP+  G+PPSRVANPLIQ
Sbjct: 61  QLRHQAELCDSKAGSDLLDMILTKGGCAVEQ---SCAQVASSPPFFSGSPPSRVANPLIQ 120

Query: 121 DARFGNEKPKMLPVFSPEVAPPP----YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRL 174
           DARFG+EK     + +P ++PPP     S P S+ R GG +R NFGN PAVR+EGFDC L
Sbjct: 121 DARFGDEK-----IITP-MSPPPSGLSSSSPSSSSRKGGCIRVNFGNKPAVRVEGFDC-L 180

[Close]

BLAST of CmoCh04G021450 vs. TrEMBL
Match: A0A067JZK6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.7e-39
Identity = 101/189 (53.44%), Postives = 124/189 (65.61%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAAD---TDRRERLVCPKPRRLGLINTTVNDNPFR------- 60
           MNQ A+Q   FS REE+  +     ++RR+ +VCPKPRRLG  N T +++P R       
Sbjct: 1   MNQCAIQPTAFSTREEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLS 60

Query: 61  HRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDAR 120
           H+    DS A  D LD++  KGG  +E    S TQ+ASSPP+ CG+PPSRVANPLIQDAR
Sbjct: 61  HQAELGDSKAGADLLDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGNEK-PKMLPVFSPEVAPPPYS--PPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRER 174
           FG+EK   + P+    + PP  S   P S+ R GG VR NFGN PAVRIEGFDC LDR+R
Sbjct: 121 FGDEKLSPVSPLMPMPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDR 180

[Close]

BLAST of CmoCh04G021450 vs. TrEMBL
Match: B9T053_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.4e-38
Identity = 100/192 (52.08%), Postives = 124/192 (64.58%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAAD---TDRRERLVCPKPRRLGLINTTVNDNPFR------- 60
           M Q A+Q + FS REE+  +     ++RR+ +VCPKPRR GL N +VND+P R       
Sbjct: 1   MKQCAIQTSAFSTREEIRSSVSGTMSERRDPVVCPKPRRFGLFNASVNDHPVRSLRWHLS 60

Query: 61  HRFD---SVAANDALDLLFFKGGC-DLENFNSSSTQLASSPP-YLCGTPPSRVANPLIQD 120
           H+ +   S A ND LD++  KGGC  +E    S TQ+ASSPP + CG+PPSRVANPLIQD
Sbjct: 61  HQTEICESKAGNDLLDIILTKGGCYGVEQ--QSCTQVASSPPPFFCGSPPSRVANPLIQD 120

Query: 121 ARFGNEKPKMLPVFSPEVAPPP----YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLD 174
           ARFG E+   +    P    PP     S P S+ R GG VR NFGN PAVR+EGFDC LD
Sbjct: 121 ARFGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKPAVRVEGFDC-LD 180

[Close]

BLAST of CmoCh04G021450 vs. TrEMBL
Match: M1B5R3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.5e-37
Identity = 96/187 (51.34%), Postives = 123/187 (65.78%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAADT--DRRERLVCPKPRRLGLINTTVND--NPFRHRF--- 60
           MN  A+Q+  F+  E+M  +  +  D+++ +VCPKPRRLGL+N T+ +   P R      
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSISDKKDAVVCPKPRRLGLLNATITEPLRPLRWHVSHQ 60

Query: 61  ----DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFG 120
               DS A  D LD++  KGG   +   SS+ Q+ASSPP+ CG+PPSRV+NPLIQDARFG
Sbjct: 61  QELCDSRAGADLLDIILAKGGGGADQ--SSAAQVASSPPFFCGSPPSRVSNPLIQDARFG 120

Query: 121 NEKPKMLPVFSPEVAPPP---YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRN 174
           +E  K+ PV SP   P P    S P ++ R GG VR NFGN PAVR+EGFDC LDR+RRN
Sbjct: 121 DE--KVTPV-SPRAIPIPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC-LDRDRRN 180

[Close]

BLAST of CmoCh04G021450 vs. TAIR10
Match: AT1G68490.1 (AT1G68490.1 unknown protein)

HSP 1 Score: 130.6 bits (327), Expect = 9.5e-31
Identity = 88/188 (46.81%), Postives = 111/188 (59.04%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAADTDRRER----LVCPKPRRLGLINTTVNDNP-----FRH 60
           MN  AVQ N F+   ++ R++     ER    +VCPKPRR+GL N   + +      F H
Sbjct: 1   MNHFAVQPNAFAAGGDL-RSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSH 60

Query: 61  RFD---SVAANDALDLLFFKGGCDLENFNSSSTQLASSP-PYLCGTPPSRVANPLIQDAR 120
           + +   S A  D LD++  K G   E  N    Q+  SP P+LCG+PPSRVANPL QDAR
Sbjct: 61  QLELCESKAETDILDIILTKDGYGAEQVNK---QVIDSPSPFLCGSPPSRVANPLTQDAR 120

Query: 121 FGNEKPKMLPVFSPEVA-PPPYSPPPSTDRNGGW-VRPNFGNIPAVRIEGFDCRLDRERR 174
           F +E   +  V  P++  PP  SP  S+ R GG  VR NFGN P VR+EGFDC LDR+ R
Sbjct: 121 FRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSR 180

[Close]

BLAST of CmoCh04G021450 vs. TAIR10
Match: AT5G16110.1 (AT5G16110.1 unknown protein)

HSP 1 Score: 120.6 bits (301), Expect = 9.9e-28
Identity = 83/187 (44.39%), Postives = 105/187 (56.15%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAAND 60
           MN   +Q+N F  REEM      DR++ +VCPKPRR+GL+   V   P R      AA  
Sbjct: 67  MNHCNLQQNAFMSREEMM---GFDRKDLVVCPKPRRVGLLANNVI-RPLRLHMSQAAA-- 126

Query: 61  ALDLLFFKGGCDL-------ENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKP 120
             DL   K G +L       E+  +    L+SSPPY  G+PPSR ANPL QDARF +EK 
Sbjct: 127 --DLCDSKAGAELLEIIRRKEDNGTIGQLLSSSPPYFPGSPPSRAANPLAQDARFRDEKL 186

Query: 121 KMLPVFSPEVAP------PPYSPPPSTDRNGGWVRPNFG-NIPAVRIEGFDCRLDRERRN 174
             +   SP + P      P  S   S+  + G VR  FG N PAVR+EGFDC L+R+R+N
Sbjct: 187 NPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQN 244

[Close]

BLAST of CmoCh04G021450 vs. TAIR10
Match: AT1G13390.1 (AT1G13390.1 unknown protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-22
Identity = 74/185 (40.00%), Postives = 103/185 (55.68%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTR-AADTDRRERLVCPKPRRLGLINTTVNDN---PFRHRF--- 60
           MN   +Q+N F   EEM R AA +DRR+ ++CPKPRR+G +N   + +      H+    
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELC 61

Query: 61  DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPP-YLCGTPPSRVANPLIQDARFGNEK 120
           +S + ++ LD +  KGG          T+   +PP +  G+PPSRV+NPL +D+ F  E 
Sbjct: 62  ESNSGSEILDFILTKGGGG--GGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKDSLFREE- 121

Query: 121 PKMLPVFSPEVAPPPYS--PPPSTDRNGGWV--RPNFGNIPAVRIEGFDCRLDRERRNRS 174
             +L V SP  + P  +   PPS+ RNG  V    +FGN P VR+ GFDC  DR   NRS
Sbjct: 122 --LLMVASPSPSTPRATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRS 176

[Close]

BLAST of CmoCh04G021450 vs. TAIR10
Match: AT3G02555.1 (AT3G02555.1 unknown protein)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-22
Identity = 75/177 (42.37%), Postives = 96/177 (54.24%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAADTDRR--ERLVCPKPRRLGLINTTVNDNPFRHRFDSVAA 60
           MN  ++Q+N F  REE            + +VCPKPRR    N  +   PFR  F    A
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYSHPVDSVVCPKPRRA---NNVIR--PFRLHFSLSGA 60

Query: 61  NDALDLLFFKGGCDL-ENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLP 120
           +D  D    K G DL + F    +  + SPP+  G+PPSR ANPL QDARFG+EK   L 
Sbjct: 61  DDVCDS---KAGEDLLDIFRRKESVSSRSPPFFLGSPPSRAANPLAQDARFGDEK---LN 120

Query: 121 VFSPEVAPPPYSPPPSTDRNGGWVRPNFGNIPA-VRIEGFDCRLDRERRNRSIPALA 174
             SP ++P     P ++    G  R  FG  PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 121 TVSPSLSP---LLPSASRVKSGCGRMKFGVKPATVRVEGFDC-LNRDRPNSSIPAMA 162

[Close]

BLAST of CmoCh04G021450 vs. NCBI nr
Match: gi|449445146|ref|XP_004140334.1| (PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus])

HSP 1 Score: 253.8 bits (647), Expect = 2.1e-64
Identity = 130/161 (80.75%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 13  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD 72
           V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC 
Sbjct: 4   VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCG 63

Query: 73  LENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPP 132
           LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+FSP  A PP SPPP
Sbjct: 64  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP-AASPPLSPPP 123

Query: 133 STDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           S  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 124 SAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmoCh04G021450 vs. NCBI nr
Match: gi|659131635|ref|XP_008465783.1| (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 2.3e-63
Identity = 128/161 (79.50%), Postives = 136/161 (84.47%), Query Frame = 1


Query: 13  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD 72
           V EEM R+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC 
Sbjct: 4   VCEEM-RSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCG 63

Query: 73  LENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPP 132
           LE FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPP
Sbjct: 64  LEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPP 123

Query: 133 STDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 174
           S  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 124 SAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CmoCh04G021450 vs. NCBI nr
Match: gi|1009155285|ref|XP_015895630.1| (PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba])

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42
Identity = 107/191 (56.02%), Postives = 132/191 (69.11%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFR-------HRF 60
           MNQ  +Q+NVFSV EEM R++  DRR+ +VCPKPRRLGL+N+ V+D+P R       H+ 
Sbjct: 1   MNQCGIQQNVFSVCEEM-RSSSMDRRDPVVCPKPRRLGLLNSAVHDHPIRSFRWHISHQA 60

Query: 61  ---DSVAANDALDLLFFKGGCDLENFNSS-STQLASSPPYLCGTPPSRVANPLIQDARFG 120
              DS A ++ LD++  KGG  +E   SS +TQ+ASSPP+ CG+PPSRVANPLIQDARFG
Sbjct: 61  EPCDSRARSELLDIILTKGGYGVEVEQSSCTTQIASSPPFFCGSPPSRVANPLIQDARFG 120

Query: 121 NEKPKMLPVFSPEVAPP-------PYSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDR 174
           +EK       SP + PP       P +   S+ R GG VR NFGN PAVRIEGFDC LDR
Sbjct: 121 DEKAAPFSPLSP-IPPPNGISSASPSAAATSSARKGGCVRANFGNKPAVRIEGFDC-LDR 180

[Close]

BLAST of CmoCh04G021450 vs. NCBI nr
Match: gi|590693466|ref|XP_007044341.1| (Uncharacterized protein TCM_009867 [Theobroma cacao])

HSP 1 Score: 170.6 bits (431), Expect = 2.4e-39
Identity = 104/193 (53.89%), Postives = 126/193 (65.28%), Query Frame = 1


Query: 1   MNQVAVQRNVF-SVREEMTRAAD-----TDRRERLVCPKPRRLGLINTTVNDNP------ 60
           M Q A Q+N   S REEM  +       TDRRE +VCPKPRRL L+N T ND+P      
Sbjct: 1   MKQGASQQNAIGSSREEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRW 60

Query: 61  -FRHRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQ 120
             RH+    DS A +D LD++  KGGC +E    S  Q+ASSPP+  G+PPSRVANPLIQ
Sbjct: 61  QLRHQAELCDSKAGSDLLDMILTKGGCAVEQ---SCAQVASSPPFFSGSPPSRVANPLIQ 120

Query: 121 DARFGNEKPKMLPVFSPEVAPPP----YSPPPSTDRNGGWVRPNFGNIPAVRIEGFDCRL 174
           DARFG+EK     + +P ++PPP     S P S+ R GG +R NFGN PAVR+EGFDC L
Sbjct: 121 DARFGDEK-----IITP-MSPPPSGLSSSSPSSSSRKGGCIRVNFGNKPAVRVEGFDC-L 180

[Close]

BLAST of CmoCh04G021450 vs. NCBI nr
Match: gi|802681309|ref|XP_012082096.1| (PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas])

HSP 1 Score: 169.5 bits (428), Expect = 5.2e-39
Identity = 101/189 (53.44%), Postives = 124/189 (65.61%), Query Frame = 1


Query: 1   MNQVAVQRNVFSVREEMTRAAD---TDRRERLVCPKPRRLGLINTTVNDNPFR------- 60
           MNQ A+Q   FS REE+  +     ++RR+ +VCPKPRRLG  N T +++P R       
Sbjct: 1   MNQCAIQPTAFSTREEIRSSVMVPISERRDTVVCPKPRRLGPFNATAHEHPVRSLRWHLS 60

Query: 61  HRF---DSVAANDALDLLFFKGGCDLENFNSSSTQLASSPPYLCGTPPSRVANPLIQDAR 120
           H+    DS A  D LD++  KGG  +E    S TQ+ASSPP+ CG+PPSRVANPLIQDAR
Sbjct: 61  HQAELGDSKAGADLLDIILTKGGYGVEQ---SCTQVASSPPFFCGSPPSRVANPLIQDAR 120

Query: 121 FGNEK-PKMLPVFSPEVAPPPYS--PPPSTDRNGGWVRPNFGNIPAVRIEGFDCRLDRER 174
           FG+EK   + P+    + PP  S   P S+ R GG VR NFGN PAVRIEGFDC LDR+R
Sbjct: 121 FGDEKLSPVSPLMPMPIQPPSGSSPSPSSSSRKGGCVRANFGNKPAVRIEGFDC-LDRDR 180

The following BLAST results are available for this feature:

BLAST of CmoCh04G021450 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G021450 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KRF1_CUCSA	1.5e-64	80.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G373190 PE=4 SV=1	[more]
A0A061E6F3_THECC	1.6e-39	53.89	Uncharacterized protein OS=Theobroma cacao GN=TCM_009867 PE=4 SV=1	[more]
A0A067JZK6_JATCU	3.7e-39	53.44	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18332 PE=4 SV=1	[more]
B9T053_RICCO	2.4e-38	52.08	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1	[more]
M1B5R3_SOLTU	4.5e-37	51.34	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1	[more]

BLAST of CmoCh04G021450 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68490.1	9.5e-31	46.81	unknown protein	[more]
AT5G16110.1	9.9e-28	44.39	unknown protein	[more]
AT1G13390.1	1.2e-22	40.00	unknown protein	[more]
AT3G02555.1	3.6e-22	42.37	unknown protein	[more]

BLAST of CmoCh04G021450 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445146\|ref\|XP_004140334.1\|	2.1e-64	80.75	PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus]	[more]
gi\|659131635\|ref\|XP_008465783.1\|	2.3e-63	79.50	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]	[more]
gi\|1009155285\|ref\|XP_015895630.1\|	1.3e-42	56.02	PREDICTED: uncharacterized protein LOC107429455 [Ziziphus jujuba]	[more]
gi\|590693466\|ref\|XP_007044341.1\|	2.4e-39	53.89	Uncharacterized protein TCM_009867 [Theobroma cacao]	[more]
gi\|802681309\|ref\|XP_012082096.1\|	5.2e-39	53.44	PREDICTED: uncharacterized protein LOC105642032 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G021450.1	CmoCh04G021450.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 1..173 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G021450	Cucsa.283530	Cucumber (Gy14) v1	cgycmoB0795
CmoCh04G021450	CmaCh18G010170	Cucurbita maxima (Rimu)	cmacmoB421
CmoCh04G021450	CmaCh04G020460	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G021450	CmaCh04G015040	Cucurbita maxima (Rimu)	cmacmoB737
CmoCh04G021450	Cla020401	Watermelon (97103) v1	cmowmB695
CmoCh04G021450	Csa5G609720	Cucumber (Chinese Long) v2	cmocuB755
CmoCh04G021450	MELO3C012253	Melon (DHL92) v3.5.1	cmomeB640
CmoCh04G021450	ClCG05G022670	Watermelon (Charleston Gray)	cmowcgB656
CmoCh04G021450	CSPI05G25320	Wild cucumber (PI 183967)	cmocpiB765
CmoCh04G021450	Lsi04G002490	Bottle gourd (USVL1VR-Ls)	cmolsiB668
CmoCh04G021450	Lsi09G010360	Bottle gourd (USVL1VR-Ls)	cmolsiB612
CmoCh04G021450	Cp4.1LG01g17850	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G021450	MELO3C012253.2	Melon (DHL92) v3.6.1	cmomedB728
CmoCh04G021450	CsaV3_5G034370	Cucumber (Chinese Long) v3	cmocucB0894
CmoCh04G021450	Cla97C05G104510	Watermelon (97103) v2	cmowmbB732
CmoCh04G021450	Bhi07G001099	Wax gourd	cmowgoB0899
CmoCh04G021450	CsGy5G024770	Cucumber (Gy14) v2	cgybcmoB671
CmoCh04G021450	Carg21595	Silver-seed gourd	carcmoB1398
CmoCh04G021450	Carg27853	Silver-seed gourd	carcmoB0896

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G021450	CmoCh15G010330	Cucurbita moschata (Rifu)	cmocmoB270
CmoCh04G021450	CmoCh18G010260	Cucurbita moschata (Rifu)	cmocmoB339
CmoCh04G021450	CmoCh04G015740	Cucurbita moschata (Rifu)	cmocmoB467

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G021450	Watermelon (97103) v2	cmowmbB680
CmoCh04G021450	Watermelon (97103) v2	cmowmbB740
CmoCh04G021450	Wax gourd	cmowgoB0827
CmoCh04G021450	Wax gourd	cmowgoB0909
CmoCh04G021450	Bottle gourd (USVL1VR-Ls)	cmolsiB613
CmoCh04G021450	Bottle gourd (USVL1VR-Ls)	cmolsiB677
CmoCh04G021450	Cucumber (Gy14) v2	cgybcmoB637
CmoCh04G021450	Melon (DHL92) v3.6.1	cmomedB719
CmoCh04G021450	Melon (DHL92) v3.6.1	cmomedB744