CsGy5G014050 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G014050
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	translocase subunit seca
Location	Chr5 : 19215022 .. 19216565 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCCATCGCTCTCTCTATATCTCTCTAGCTGTTTTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCTATTCTCTCTCTCCATTTTCGTTTTATTTTTCAATTAACAAATCTAATTCCCCTGTCTCTTTCCCCCATTCTCTCTTCCTTATGCTCTTCTTATATTGCTCATAACTGACGCTCCTCCTCCTCCCCTTGTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGTTTAATCTCTATATCACTTTTCTTTTTAACTTCCATGCTCTTTCACTTCAAACTTTCAATTTTTAGATCTTTGTATTTACAGGATTGTATTTTCATTTTTTTGGGGGGAAAGATGTTTCTGCTTAGATCTATTGTGAATTGGGTTTTCTTTTTCCCAGTATGTTTAAAACGTTTGTTTTATCTTGTCTGTATAGGCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGTACTTAATTTTCTCTTAGAGATGAATTTTATCCAATAAAAGAAGAGGATTGATGAATATTTAGTTTTTGTGTGTGTGTGTTTTCTTAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATGCACAATTAGCCTCGTCGCCACCGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCTCTTTTCGCCGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATCGAAGGGTTTGATTGCCGCCTCGACAGAGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAGAAACCCTATCCAAGCCGAGCCGGTTGAGCAATGATGATGAAGAAAACAAACACATGGATTTTAATTTTTTTTCCCACATTCAAAATTTAAATATTAAAGTAAAATTTTGAAAGAAAAGAAAAAACCTTTTTGACCAAAAGACCATTATTGTAAATAACTTGAAAAGGAAATCCAAGTAAATATTATGTCAAAAGAAAAGAGGGCCTTGTTAGGTTTCTTTCTCTTCATGTTTGAGACTCCTTATTTGACCATATTGAAGAATAAGAGGGAGAGGGAGATAATTCTTCTCTATTTTGTAATATATTTAAGTTTTTTTTTTCTTTAGTAGTGTCCAAGATTGTTTCTTAGGGGCAAACATTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATCGAAGCTGCATAAATTCAATATTAATCATGTAAATTTTTAAATGTTATATATATATATATACACACTTTTCCCAATCTTTTTTGGGATATTTTCTTTATCAACCTCCCATTTATGATTCAAACAA

mRNA sequence

CTCCCCATCGCTCTCTCTATATCTCTCTAGCTGTTTTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCTATTCTCTCTCTCCATTTTCGTTTTATTTTTCAATTAACAAATCTAATTCCCCTGTCTCTTTCCCCCATTCTCTCTTCCTTATGCTCTTCTTATATTGCTCATAACTGACGCTCCTCCTCCTCCCCTTGTTCTCCCAACCACAATCCTCTCTCTTCTTCTTCAGGCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATGCACAATTAGCCTCGTCGCCACCGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCTCTTTTCGCCGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATCGAAGGGTTTGATTGCCGCCTCGACAGAGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAGAAACCCTATCCAAGCCGAGCCGGTTGAGCAATGATGATGAAGAAAACAAACACATGGATTTTAATTTTTTTTCCCACATTCAAAATTTAAATATTAAAGTAAAATTTTGAAAGAAAAGAAAAAACCTTTTTGACCAAAAGACCATTATTGTAAATAACTTGAAAAGGAAATCCAAGTAAATATTATGTCAAAAGAAAAGAGGGCCTTGTTAGGTTTCTTTCTCTTCATGTTTGAGACTCCTTATTTGACCATATTGAAGAATAAGAGGGAGAGGGAGATAATTCTTCTCTATTTTGTAATATATTTAAGTTTTTTTTTTCTTTAGTAGTGTCCAAGATTGTTTCTTAGGGGCAAACATTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATCGAAGCTGCATAAATTCAATATTAATCATGTAAATTTTTAAATGTTATATATATATATATACACACTTTTCCCAATCTTTTTTGGGATATTTTCTTTATCAACCTCCCATTTATGATTCAAACAA

Coding sequence (CDS)

ATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATGCACAATTAGCCTCGTCGCCACCGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCTCTTTTCGCCGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATCGAAGGGTTTGATTGCCGCCTCGACAGAGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAG

Protein sequence

MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

Homology

[Close]

BLAST of CsGy5G014050 vs. NCBI nr
Match: XP_004140334.1 (PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_5G373190 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 1.4e-79
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60
           MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE
Sbjct: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60

Query: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG 120
           NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG
Sbjct: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG 120

Query: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CsGy5G014050 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 292.4 bits (747), Expect = 9.5e-76
Identity = 138/158 (87.34%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60
           MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE
Sbjct: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60

Query: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG 120
            FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF             AG
Sbjct: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CsGy5G014050 vs. NCBI nr
Match: XP_022923501.1 (uncharacterized protein LOC111431174 [Cucurbita moschata])

HSP 1 Score: 231.9 bits (590), Expect = 1.5e-57
Identity = 120/161 (74.53%), Postives = 127/161 (78.88%), Query Frame = 0


Query: 4   VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCG 63
           V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC 
Sbjct: 13  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD 72

Query: 64  LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXX 123
           LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+F             
Sbjct: 73  LENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPP 132

Query: 124 A-GRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           +  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 133 STDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of CsGy5G014050 vs. NCBI nr
Match: XP_022971782.1 (uncharacterized protein LOC111470460 [Cucurbita maxima])

HSP 1 Score: 229.9 bits (585), Expect = 5.8e-57
Identity = 116/158 (73.42%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 6   EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLEN 65
           E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LEN
Sbjct: 16  EMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLEN 75

Query: 66  FNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXA-G 125
           F SS+ QLASSPPY CG+PPSRVANPLIQDARFG+EKPK+LP+F             +  
Sbjct: 76  FKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135

Query: 126 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of CsGy5G014050 vs. NCBI nr
Match: XP_023538993.1 (uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227.3 bits (578), Expect = 3.8e-56
Identity = 115/158 (72.78%), Postives = 123/158 (77.85%), Query Frame = 0


Query: 6   EEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLEN 65
           E M+ A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF K GC LEN
Sbjct: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKEGCDLEN 75

Query: 66  FNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXA-G 125
           FNS++ QLASSPPY CG+PPSRVANPLIQDARFG EKPK+LP+F             +  
Sbjct: 76  FNSTSTQLASSPPYLCGTPPSRVANPLIQDARFGKEKPKMLPVFSPEVAPPPYSPPPSTD 135

Query: 126 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of CsGy5G014050 vs. TAIR10
Match: AT1G68490.1 (unknown protein)

HSP 1 Score: 118.6 bits (296), Expect = 3.4e-27
Identity = 73/156 (46.79%), Postives = 91/156 (58.33%), Query Frame = 0


Query: 19  IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDALDLLFLKGGCGLENFNSSN 78
           +VCPKPRR+GL N+  + +      F H+        ++D LD++  K G G E  N   
Sbjct: 32  VVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDIILTKDGYGAEQVNK-- 91

Query: 79  AQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF--XXXXXXXXXXXXXAGRKG 138
            Q+  SP P+ CGSPPSRVANPL QDARF DE   +  +                +GRKG
Sbjct: 92  -QVIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKG 151

Query: 139 GC-VRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           GC VR NFG +P VR+EGFDC LDR+ RN SIPALA
Sbjct: 152 GCVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

[Close]

BLAST of CsGy5G014050 vs. TAIR10
Match: AT5G16110.1 (unknown protein)

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-26
Identity = 79/161 (49.07%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 14  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL-------ENFNSSN 73
           DR++ +VCPKPRR+GL+ +     P R      A DL   K G  L       E+  +  
Sbjct: 87  DRKDLVVCPKPRRVGLLANNV-IRPLRLHMSQAAADLCDSKAGAELLEIIRRKEDNGTIG 146

Query: 74  AQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------PKLLPLFXXXXXXXXXXXXX 133
             L+SSPPYF GSPPSR ANPL QDARF DEK        P L P +       XXXXXX
Sbjct: 147 QLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQP-YSATGFPSXXXXXX 206

Query: 134 AGRKGGCVRVNFGKN-PAVRIEGFDCRLDRERRNRSIPALA 159
                GCVR+ FG N PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 207 XXXXXGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

[Close]

BLAST of CsGy5G014050 vs. TAIR10
Match: AT3G02555.1 (unknown protein)

HSP 1 Score: 104.0 bits (258), Expect = 8.7e-23
Identity = 71/151 (47.02%), Postives = 84/151 (55.63%), Query Frame = 0


Query: 17  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDALDLLFLKGGCG-LENFNSSNAQLASSPP 76
           + +VCPKPRR   +       PFR  F  S A D+   K G   L+ F    +  + SPP
Sbjct: 29  DSVVCPKPRRANNV-----IRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 77  YFCGSPPSRVANPLIQDARFGDEK-----PKLLPLFXXXXXXXXXXXXXAGR-KGGCVRV 136
           +F GSPPSR ANPL QDARFGDEK     P L PL              A R K GC R+
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEKLNTVSPSLSPLL-----------PSASRVKSGCGRM 148

Query: 137 NFGKNPA-VRIEGFDCRLDRERRNRSIPALA 159
            FG  PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 KFGVKPATVRVEGFDC-LNRDRPNSSIPAMA 162

[Close]

BLAST of CsGy5G014050 vs. TAIR10
Match: AT1G13390.1 (unknown protein)

HSP 1 Score: 78.2 bits (191), Expect = 5.1e-15
Identity = 55/167 (32.93%), Postives = 76/167 (45.51%), Query Frame = 0


Query: 6   EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFL 65
           EEM+   A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ LD +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXX 125
           K                       GSPPSRV+NPL +D+ F +E   +            
Sbjct: 73  K-XXXXXXXXXXXXXXXXXXXXXTGSPPSRVSNPLTKDSLFREELLMVASPSPSTPRATK 132

Query: 126 XXXXXAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
                + R G CV    +FG NP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 PQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of CsGy5G014050 vs. TrEMBL
Match: tr|A0A0A0KRF1|A0A0A0KRF1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 9.4e-80
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60
           MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE
Sbjct: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60

Query: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG 120
           NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG
Sbjct: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG 120

Query: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CsGy5G014050 vs. TrEMBL
Match: tr|A0A1S3CR46|A0A1S3CR46_CUCME (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.3e-76
Identity = 138/158 (87.34%), Postives = 141/158 (89.24%), Query Frame = 0


Query: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60
           MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE
Sbjct: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60

Query: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFXXXXXXXXXXXXXAG 120
            FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF             AG
Sbjct: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of CsGy5G014050 vs. TrEMBL
Match: tr|A0A2C9UKI0|A0A2C9UKI0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G102800 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.3e-40
Identity = 91/172 (52.91%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 5   CEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFR--------------HRFDSDALDL 64
           CEE+++  +DRR+ +VCPKPRRLGL+N T ND+P R               +  +D L++
Sbjct: 14  CEEIRSPVSDRRDSVVCPKPRRLGLLNVTANDHPVRSLRWQISHQAELCDSKAGTDLLEI 73

Query: 65  LFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK----PKLLPLFX 124
           +  KGGCG+E    S  Q+ASSPP+FCGSPPSRVANPLIQDARFGDEK      L+P+  
Sbjct: 74  ILTKGGCGVE---QSYTQVASSPPFFCGSPPSRVANPLIQDARFGDEKFSPISPLMPMPI 133

Query: 125 XXXXXXXXXXXXAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
                       + RKGGCVR NFG  PAVR+EGFDC LDR+ RN SIP LA
Sbjct: 134 LPPSGLSSSPTSSTRKGGCVRSNFGNKPAVRVEGFDC-LDRDSRNCSIPTLA 181

[Close]

BLAST of CsGy5G014050 vs. TrEMBL
Match: tr|A0A061E6F3|A0A061E6F3_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_009867 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.2e-38
Identity = 106/173 (61.27%), Postives = 124/173 (71.68%), Query Frame = 0


Query: 6   EEMQTA------ATDRRERIVCPKPRRLGLINDTCNDNP-------FRHRFD-------S 65
           EEM+++       TDRRE +VCPKPRRL L+N T ND+P        RH+ +       S
Sbjct: 16  EEMRSSISVSVMVTDRRETMVCPKPRRLSLLNATFNDHPVRSLRWQLRHQAELCDSKAGS 75

Query: 66  DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLF 125
           D LD++  KGGC +E    S AQ+ASSPP+F GSPPSRVANPLIQDARFGDEK  + P+ 
Sbjct: 76  DLLDMILTKGGCAVE---QSCAQVASSPPFFSGSPPSRVANPLIQDARFGDEK-IITPMS 135

Query: 126 XXXXXXXXXXXXXAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
            XXXXXXXXXXXX   KGGC+RVNFG  PAVR+EGFDC LDR+RRN SIPALA
Sbjct: 136 PXXXXXXXXXXXXXXXKGGCIRVNFGNKPAVRVEGFDC-LDRDRRNCSIPALA 183

[Close]

BLAST of CsGy5G014050 vs. TrEMBL
Match: tr|A0A2P5DZ94|A0A2P5DZ94_PARAD (Translocase subunit seca OS=Parasponia andersonii OX=3476 GN=PanWU01x14_018730 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.8e-38
Identity = 103/172 (59.88%), Postives = 122/172 (70.93%), Query Frame = 0


Query: 4   VCEEMQTAAT---DRRERIVCPKPRRLGLINDTCNDNP-------FRHRFD-------SD 63
           VCEEM++ ++   DR++ +VCPKPRRLGL+N   +D+P       F H+ +       +D
Sbjct: 14  VCEEMRSGSSSSMDRKDPVVCPKPRRLGLLNAAVHDHPIRSLRWHFNHQSELCDSKAGTD 73

Query: 64  ALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFX 123
            LD +  KGG G+E  +S  AQ+ASSPP+F GSPPSRVANPLIQDARFGDEK        
Sbjct: 74  LLDAILTKGGYGVEP-SSCTAQVASSPPFFSGSPPSRVANPLIQDARFGDEKLAPFATPP 133

Query: 124 XXXXXXXXXXXXAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 159
             XXXXXXXXXX  RKGGCVRVNFG  PAVRIEGFDC LDR+RRN SIPALA
Sbjct: 134 IPXXXXXXXXXXXARKGGCVRVNFGNKPAVRIEGFDC-LDRDRRNCSIPALA 183

The following BLAST results are available for this feature:

BLAST of CsGy5G014050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140334.1	1.4e-79	100.00	PREDICTED: uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hy...	[more]
XP_008465783.1	9.5e-76	87.34	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 P...	[more]
XP_022923501.1	1.5e-57	74.53	uncharacterized protein LOC111431174 [Cucurbita moschata]	[more]
XP_022971782.1	5.8e-57	73.42	uncharacterized protein LOC111470460 [Cucurbita maxima]	[more]
XP_023538993.1	3.8e-56	72.78	uncharacterized protein LOC111799757 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy5G014050 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68490.1	3.4e-27	46.79	unknown protein	[more]
AT5G16110.1	6.4e-26	49.07	unknown protein	[more]
AT3G02555.1	8.7e-23	47.02	unknown protein	[more]
AT1G13390.1	5.1e-15	32.93	unknown protein	[more]

BLAST of CsGy5G014050 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy5G014050 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRF1\|A0A0A0KRF1_CUCSA	9.4e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
tr\|A0A1S3CR46\|A0A1S3CR46_CUCME	6.3e-76	87.34	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
tr\|A0A2C9UKI0\|A0A2C9UKI0_MANES	3.3e-40	52.91	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G102800 PE=4 SV=...	[more]
tr\|A0A061E6F3\|A0A061E6F3_THECC	5.2e-38	61.27	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_009867 PE=4 SV=1	[more]
tr\|A0A2P5DZ94\|A0A2P5DZ94_PARAD	6.8e-38	59.88	Translocase subunit seca OS=Parasponia andersonii OX=3476 GN=PanWU01x14_018730 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G014050.1	CsGy5G014050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 5..158
None	No IPR available	PANTHER	PTHR33384:SF14	SUBFAMILY NOT NAMED	coord: 5..158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G014050	Csa5G373190	Cucumber (Chinese Long) v2	cgybcuB223
CsGy5G014050	MELO3C003023	Melon (DHL92) v3.5.1	cgybmeB294
CsGy5G014050	ClCG03G009560	Watermelon (Charleston Gray)	cgybwcgB349
CsGy5G014050	CSPI05G14020	Wild cucumber (PI 183967)	cgybcpiB225
CsGy5G014050	CmaCh04G020460	Cucurbita maxima (Rimu)	cgybcmaB663
CsGy5G014050	Lsi09G010360	Bottle gourd (USVL1VR-Ls)	cgyblsiB298
CsGy5G014050	Cp4.1LG01g17850	Cucurbita pepo (Zucchini)	cgybcpeB639
CsGy5G014050	MELO3C003023.2	Melon (DHL92) v3.6.1	cgybmedB294
CsGy5G014050	CsaV3_5G023120	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G014050	Cla97C03G060670	Watermelon (97103) v2	cgybwmbB354
CsGy5G014050	Bhi12G001146	Wax gourd	cgybwgoB425

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G014050	Wax gourd	cgybwgoB428