Lsi09G009670 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G009670
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionLipid transfer protein
Locationchr09 : 12701520 .. 12704321 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAAAAAAGAAAAAAGAAAAAAAAAAAGAAACGGCATTCGAATCCCAATCCGAATTCCATCGCTGAAATAAAACATCACGGAGTGAGAAATCTGCATAAGCAAGCCCTAATTTCCAGCGCATAGAAGAAATGGCAATGTCGATGATTTGGAGTTTGGGTGTGTTGGTGACCTGCATTGCAGCGATTGCGAGTGCGGCTTCGCCATCGCCATCGCCGAGTGCGGCGGATTGCTCGGCAGTGATGTTCCAGATGCTAGAGTGCGCGGATTACATCATGATTGGGAGCAGGAAGGCGAATGCCTCCAAGGCTTGCTGCAAGGTGGTGGGAGATGTGTTGAAATCGAAAGGCGATTGTATGTGCGATGTGTTGAAACAGAGCGGCAGAATGGGGATTCATTTGAATCTCACCAGAGCCATCCCCCTTCCCGCTGCCTGCGGAATCTCTACTTCCCTTCCTGATTGCGGCAGTGCGTTTTCCTCTTGCTTTTCAAATCCTTCATAACTTTTTCTTCTCATTTTCAGCTTTCTTTCTTCTTCGCAGTTCCTCTTCCCCCAGGTATGGCCCCTGCTGCAGTTCCAACTACTAAACCGCCAACGCCACTTCCAAGTACTAAACCGCCAACGCCGGCTCCAAGAACTAAAGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAAGAACTAAAGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAAGTACACAGGCCCCTACACCGTCTCCAAGTACACAGGCGCCAACGCCGGCTCCAACTACAAAGGCCCCAACTCCGGCTCCAGGTACACTTGTGCATCACGTGGATTTTTATATATATAATTTTTTAATATTACTATATAAAAAAATGGGTTAATGAATTTCACTTTACAGATAGTAATAGGTGAGAGGTTTATAAATTTTTTATATATTTATGAATAGTTTGATTTTTTTCCATTTATAATAATTTTCTTTTTATTTTTTTTAATTAAGATTTTTTCATTGACAATTTGTGGGGCGGTGAAATCGAGTGTGATAGGTTGAGGGTTTGAACTAGAACTAAAATACTTAAAATAATTTTTTAGGTTAATGAATGTAATTAAATATATGCCTAAAATAAAATGAATATGTGATTTCCCTTGTGAAAAAAAATGAATATGTGATTTCCCTTGTGAAAAAAAATGAATATGTGATTTCCCTTGTGAAAAAAAATGAATATGTGATTTAATTTTATATATTATTTTGGCTAAATTATAACAAATGTCTTTATAATACCATTCACTCTAGCTTTGAATAGATGTCTTTTAGAATTTAGAATTTTGAACATAAATGCAGAGAATGTGTGGTGGTGATTTGAAATTAAATCTGTGCCTAACTATCATACTATTTTCTATCTCAATTTTCATTTAAAATTCTGAATTTATACCCAAAATATTTTTTAAATTCAGAGGTAATATTATAACATTTGAAAGTATGAGTATTTTATATAATTAATTTTTTTTTACTAATTAAAAAGATAATAGATTTGTTTAAAATATTATAATGCAATTATAACATTATATTTTTAAATAATTTATTGAAAAAATAAAAAAAATCAATAAATGTCATATTGATAATCTTCTAATGTTAATGAGCTCAAATAAAATAAAAAAACAGACATATAAAAAATCAAAATTAATGAGGAAATGTATTGAAAATATTTTTAAAGGACAGTGAAATAAGATTTTAAAAAAAAATGGTAAAATCGAAAATAAAATTTATCTACTAATATAATTTAATAGAAGTTTGGATTTGTATTTATGATTAGAAATATCGAGACTTTCTTTCTGAGAATAATTATTAATTTTTGTTTGTTTATATTTGAGAATAAACTAAATTAATGATTTCTTAATAAGACTTTTAGAAACATTAACCTAATTCTTTTGAAGGTGGTTTTTAGTGTGGGTTTGGTGATGTCAGGAACAAAATAAAATTGATTTTCATACAAGTTTATCCAAATTTCTTAATGTAATTTTTTGTTTGTATGTTTAAAAGCAATTTTGAATTATTACTTTAGTTTCAAAAGCAAGTTTAGAACTACCAAATTATTAATAATGAGAATTTTTATTTAAAAAATATGGATATATAAGTTTTAATTTTAGAAAGTTAAATTATATTCAATAAAGATAAAAATGATTAGAAATACAATATTTTATTTTATACTCAAAAAGTAAAATATGTATTACTATGATTTTAGAATATAGAATATAGTAATTTGATACATTTATTTAAACTAAGAATCCAATTTCTACTTTAATATTTCCCTTAACATTTTTTTTTCTTTTGAAATAAAAGTGTGACAATAGCGAGTGATTTTTGACACCCTAAACATAAATAACTGAAGTTTGTGTTCACATACCTAAAATTACATGCTATTGACAAATATTCATTATTATTTGAATCAACGAAGTGAAATATTTTTATTAAGAACTAAACTAAACCCGTATTTTGTTGCAGTTAACCCTCCAATAGCAGCACCACCAGCACCAGAAATGCCGCCCAGCAGTGGCCCGACGGCAGCTCCAACACCGTCACACGACAACATGGGACCGTCCGGTGAGGACTCGCCGGCACCGTCGCCGTCGGCTGCCCCATCTTTCACCACTTCCAGTAACCTAGTTGTGCTACTTCTCACCCTTCTCACCCTTCTCGCTTCATTCTGA

mRNA sequence

AAAGAAAAAAAGAAAAAAGAAAAAAAAAAAGAAACGGCATTCGAATCCCAATCCGAATTCCATCGCTGAAATAAAACATCACGGAGTGAGAAATCTGCATAAGCAAGCCCTAATTTCCAGCGCATAGAAGAAATGGCAATGTCGATGATTTGGAGTTTGGGTGTGTTGGTGACCTGCATTGCAGCGATTGCGAGTGCGGCTTCGCCATCGCCATCGCCGAGTGCGGCGGATTGCTCGGCAGTGATGTTCCAGATGCTAGAGTGCGCGGATTACATCATGATTGGGAGCAGGAAGGCGAATGCCTCCAAGGCTTGCTGCAAGGTGGTGGGAGATGTGTTGAAATCGAAAGGCGATTGTATGTGCGATGTGTTGAAACAGAGCGGCAGAATGGGGATTCATTTGAATCTCACCAGAGCCATCCCCCTTCCCGCTGCCTGCGGAATCTCTACTTCCCTTCCTGATTGCGGCATTCCTCTTCCCCCAGGTATGGCCCCTGCTGCAGTTCCAACTACTAAACCGCCAACGCCACTTCCAAGTACTAAACCGCCAACGCCGGCTCCAAGAACTAAAGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAAGAACTAAAGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAAGTACACAGGCCCCTACACCGTCTCCAAGTACACAGGCGCCAACGCCGGCTCCAACTACAAAGGCCCCAACTCCGGCTCCAGGTACACTTGTGCATCACGTTAATGAATTTAACCCTCCAATAGCAGCACCACCAGCACCAGAAATGCCGCCCAGCAGTGGCCCGACGGCAGCTCCAACACCGTCACACGACAACATGGGACCGTCCGGTGAGGACTCGCCGGCACCGTCGCCGTCGGCTGCCCCATCTTTCACCACTTCCAGTAACCTAGTTGTGCTACTTCTCACCCTTCTCACCCTTCTCGCTTCATTCTGA

Coding sequence (CDS)

ATGGCAATGTCGATGATTTGGAGTTTGGGTGTGTTGGTGACCTGCATTGCAGCGATTGCGAGTGCGGCTTCGCCATCGCCATCGCCGAGTGCGGCGGATTGCTCGGCAGTGATGTTCCAGATGCTAGAGTGCGCGGATTACATCATGATTGGGAGCAGGAAGGCGAATGCCTCCAAGGCTTGCTGCAAGGTGGTGGGAGATGTGTTGAAATCGAAAGGCGATTGTATGTGCGATGTGTTGAAACAGAGCGGCAGAATGGGGATTCATTTGAATCTCACCAGAGCCATCCCCCTTCCCGCTGCCTGCGGAATCTCTACTTCCCTTCCTGATTGCGGCATTCCTCTTCCCCCAGGTATGGCCCCTGCTGCAGTTCCAACTACTAAACCGCCAACGCCACTTCCAAGTACTAAACCGCCAACGCCGGCTCCAAGAACTAAAGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAAGAACTAAAGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAACTACAAAGGCGCCAACGCCGGCTCCAAGTACACAGGCCCCTACACCGTCTCCAAGTACACAGGCGCCAACGCCGGCTCCAACTACAAAGGCCCCAACTCCGGCTCCAGGTACACTTGTGCATCACGTTAATGAATTTAACCCTCCAATAGCAGCACCACCAGCACCAGAAATGCCGCCCAGCAGTGGCCCGACGGCAGCTCCAACACCGTCACACGACAACATGGGACCGTCCGGTGAGGACTCGCCGGCACCGTCGCCGTCGGCTGCCCCATCTTTCACCACTTCCAGTAACCTAGTTGTGCTACTTCTCACCCTTCTCACCCTTCTCGCTTCATTCTGA

Protein sequence

MAMSMIWSLGVLVTCIAAIASAASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKACCKVVGDVLKSKGDCMCDVLKQSGRMGIHLNLTRAIPLPAACGISTSLPDCGIPLPPGMAPAAVPTTKPPTPLPSTKPPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPSTQAPTPSPSTQAPTPAPTTKAPTPAPGTLVHHVNEFNPPIAAPPAPEMPPSSGPTAAPTPSHDNMGPSGEDSPAPSPSAAPSFTTSSNLVVLLLTLLTLLASF
Homology
[Close]
BLAST of Lsi09G009670 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.6e-07
Identity = 42/135 (31.11%), Postives = 65/135 (48.15%), Query Frame = 1 

Query: 22  AASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKACCKVVGDVLKSKGDCMCDVLK 81
           A +P+PS    DCS ++  M +C  ++  G   A     CC  +  VLK+   C+C+  K
Sbjct: 34  ATAPAPS---VDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFK 93

Query: 82  QSGRMGIHLNLTRAIPLPAACGI-STSLPDCGIPLPPGMAPAAVPTTKPPTP-LPSTKPP 141
            S  +G+ LN+T+A  LPAAC + + S+  CG+ + P  AP   P      P       P
Sbjct: 94  SSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGFLAP 153

Query: 142 TPAPRTKAPTPAPTT 155
            P+      +  PT+
Sbjct: 154 NPSSGNDGSSLIPTS 165

[Close]
BLAST of Lsi09G009670 vs. TrEMBL
Match: A0A0A0KN80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.6e-69
Identity = 186/305 (60.98%), Postives = 217/305 (71.15%), Query Frame = 1 

Query: 1   MAMSMIWSLGVLVTCIAAIASAASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKA 60
           M M MI +LG+ +TCI AIASA SPSP  +A DCS V+FQML C DY+ IGS KANAS  
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAGSPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANASLV 60

Query: 61  CCKVVGDVLKSKGDCMCDVLKQSGRMGIHLNLTRAIPLPAACGISTSLPDCGIPLPPGMA 120
           CC+V+ + L+ + DCMCDVLKQS +MGIHLN +RAI LPAACGISTSLPDC I L  GMA
Sbjct: 61  CCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQGMA 120

Query: 121 PAAVPTTKPPTPLPSTKPPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPRTKAPTPAPT 180
           PA         P+PSTK PT AP  K PT AP T+ PTPAP T+ PTPAP  K PTPAP 
Sbjct: 121 PA---------PIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPF 180

Query: 181 TKAPTPAPTTKAPTPAPTTKAPTPAPSTQAPTPSPSTQAPTPAPTTKAPTPAPGTLVHHV 240
           T+ PTPAP TK PTPAP T +PTPAP+ QAP+P+ + QAP+P PTT A  PAP       
Sbjct: 181 TRTPTPAPLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVASVPAP------- 240

Query: 241 NEFNPPIAAPPAPEMPPSSGPTAAPTPSHDNMGPSGEDSPAPSPSA-APSFTTSSNLVVL 300
              NPPIA PPAP  P  + P++   PS+   GPSGEDSP P+PSA +P F +SSNL+VL
Sbjct: 241 --VNPPIATPPAPPAPEVT-PSSDLAPSN---GPSGEDSPMPTPSAGSPYFPSSSNLIVL 283

Query: 301 LLTLL 305
           LLTLL
Sbjct: 301 LLTLL 283

[Close]
BLAST of Lsi09G009670 vs. TrEMBL
Match: H3GVS3_PHYRM (Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 7.0e-17
Identity = 99/207 (47.83%), Postives = 118/207 (57.00%), Query Frame = 1 

Query: 105 STSLPDCGIPLPPGMAPAAVPTTKPPTPLPST-----KPPTPAPRTKAPTPAPTTKAPTP 164
           ST+ P+   P P    P   PTT+ PTP P+T     +P TPAP T+ PTPAPTT  PTP
Sbjct: 781 STATPEPATPAPTTEEPTPAPTTEEPTPAPTTSEPTPEPTTPAPTTEEPTPAPTTSEPTP 840

Query: 165 APTTKAPTPAPRTKAPTPAPTTKAP-----TPAPTTKAPTPAPTTKAP-----TPAPSTQ 224
            PT    TPAP T+ PTPAPTT  P     TPAPTT+ PTPAPTT  P     TPAP+T+
Sbjct: 841 EPT----TPAPTTEEPTPAPTTSEPTPEPTTPAPTTEEPTPAPTTSEPTPEPTTPAPTTE 900

Query: 225 APTPSPSTQAPTPAPTTKAPTPAPGTLVHHVNEFNP-PIAAPPAPEMPPSSGPTAAPTPS 284
            PTP+P+T+ PTPAPTT  PTP P T      E  P P  + P PE    +  T  PTP+
Sbjct: 901 EPTPAPTTEEPTPAPTTSEPTPEPTTPAPTTEEPTPAPTTSEPTPEPTTPAPTTEEPTPA 960

Query: 285 HDNMGPSGE---DSPAPSPSAAPSFTT 293
                P+ E     P P P+  P+ TT
Sbjct: 961 PTTEEPTPEPTTSEPTPEPT-TPAPTT 982

[Close]
BLAST of Lsi09G009670 vs. TrEMBL
Match: Q7PRG9_ANOGA (AGAP010468-PA (Fragment) OS=Anopheles gambiae GN=AgaP_AGAP010468 PE=4 SV=4)

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-16
Identity = 60/76 (78.95%), Postives = 72/76 (94.74%), Query Frame = 1 

Query: 155 KAPTPAPTTKAPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPSTQAPTPS 214
           +APTPAPTT+APTPAP T+ PTPAPTT+APTPAPTT+APTPAP+T+APTPAP+T+APTP+
Sbjct: 82  EAPTPAPTTEAPTPAPTTEVPTPAPTTEAPTPAPTTEAPTPAPSTEAPTPAPTTEAPTPA 141

Query: 215 PSTQAPTPAPTTKAPT 231
           PST+APTPAPTT  P+
Sbjct: 142 PSTEAPTPAPTTSTPS 157

[Close]
BLAST of Lsi09G009670 vs. TrEMBL
Match: K9VI87_9CYAN (Conserved repeat domain protein OS=Oscillatoria nigro-viridis PCC 7112 GN=Osc7112_3447 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.6e-14
Identity = 68/117 (58.12%), Postives = 74/117 (63.25%), Query Frame = 1 

Query: 125  PTTKPPTPLPSTKPPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPRTKAPTPAPTTKAP 184
            PTT  PTP P+T  PTP P T  PTP PTT  PTP PTT  PTP P T  PTP PTT  P
Sbjct: 970  PTTPTPTPTPTTPTPTPTPTTPTPTPTPTTPTPTPTPTTPTPTPTPTTPTPTPTPTTPTP 1029

Query: 185  TPAPTTKAPTPAPTTKAPTPAPSTQAPTPSPSTQAPTPAPTTKAPTPAPGTLVHHVN 242
            TP PTT  PTP PTT  PTP P+T  PTP+P+T  PTP PTT  PT     L ++ N
Sbjct: 1030 TPTPTTPTPTPTPTTPTPTPTPTTPTPTPTPTTPTPTPTPTT--PTDNQPPLANNAN 1084

[Close]
BLAST of Lsi09G009670 vs. TrEMBL
Match: T0QXX7_9STRA (Uncharacterized protein OS=Saprolegnia diclina VS20 GN=SDRG_02950 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.3e-14
Identity = 107/226 (47.35%), Postives = 126/226 (55.75%), Query Frame = 1 

Query: 99  PAACGIST-SLPDCGI---------PLPPGMAPAAVPTTKPPTPLPSTKPPTPAPRTKAP 158
           PAA  ++T +LPD  +         PL P     +VPT  P  P P+   PTPAP    P
Sbjct: 137 PAAWFVATGALPDYQVGCLDGSPVQPLNPPTPKPSVPTPAPSVPTPAPSVPTPAP--SVP 196

Query: 159 TPAPTTKAPTPAPTTKAPTPAPRTKAPTPAPTTKAP---TPAPTTKAPTPAPTTKAPTPA 218
           TPAPTT APTPAPTT APTPAP T APTPAPTT AP   TPAPTT   TPAPTT  P P 
Sbjct: 197 TPAPTTPAPTPAPTTPAPTPAPTTPAPTPAPTTPAPTTSTPAPTTS--TPAPTTSTPAPT 256

Query: 219 PSTQAPTPSPSTQAPTPA-----PTTKAPTPAPGTLVHHVNEFNP-PIAAPPAPE----M 278
           P++  PTP+P+T APTPA     PT K+ TP PGT         P P +  P PE    +
Sbjct: 257 PASSTPTPAPTTPAPTPATSTPMPTPKSSTPCPGTTSPAPTTETPCPTSMTPKPETTGPV 316

Query: 279 PPSSGP-----TAAPTPSHDNMGPSGEDSPAPSP-SAAPSFTTSSN 296
           P SS P     T  PTP      P+   +P P+P S+ PS T + +
Sbjct: 317 PTSSTPCPTTVTPVPTPVSSTPYPTNV-TPVPAPASSTPSPTPAGS 357

[Close]
BLAST of Lsi09G009670 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-14
Identity = 54/153 (35.29%), Postives = 83/153 (54.25%), Query Frame = 1 

Query: 18  AIASAASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKACCKVVGDVLKSKGDCMC 77
           A +   +P+P PS++DCS V++ M++C  Y+ +GS +    K+CC  +  VL+    C+C
Sbjct: 32  AKSPVGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCIC 91

Query: 78  DVLKQSGRMGIHLNLTRAIPLPAACGISTSLPDCGIPLPPGMAPAAVPTTKPPTPLPSTK 137
             L  +G MGI LN TRA+  P AC +S + P CGI       P A P +      PS  
Sbjct: 92  AGLVSAGEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVS------PSAG 151

Query: 138 PPTPAP-RTKAPTPAPTTKAPTPAPTTKAPTPA 170
            PT +P   K+P  + T+ +    P+  AP+P+
Sbjct: 152 APTTSPSAAKSPETSATSPSSDETPSMTAPSPS 178

[Close]
BLAST of Lsi09G009670 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08
Identity = 42/135 (31.11%), Postives = 65/135 (48.15%), Query Frame = 1 

Query: 22  AASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKACCKVVGDVLKSKGDCMCDVLK 81
           A +P+PS    DCS ++  M +C  ++  G   A     CC  +  VLK+   C+C+  K
Sbjct: 34  ATAPAPS---VDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCEAFK 93

Query: 82  QSGRMGIHLNLTRAIPLPAACGI-STSLPDCGIPLPPGMAPAAVPTTKPPTP-LPSTKPP 141
            S  +G+ LN+T+A  LPAAC + + S+  CG+ + P  AP   P      P       P
Sbjct: 94  SSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPGLAPGVAAAGPETAGFLAP 153

Query: 142 TPAPRTKAPTPAPTT 155
            P+      +  PT+
Sbjct: 154 NPSSGNDGSSLIPTS 165

[Close]
BLAST of Lsi09G009670 vs. TAIR10
Match: AT2G13820.1 (AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 38/141 (26.95%), Postives = 70/141 (49.65%), Query Frame = 1 

Query: 13  VTCIAAIASAASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKACCKVVGDVLKSK 72
           +  I ++ +  S   + +A DCS+++  M +C  ++  GS        CC  +  V+++ 
Sbjct: 6   ILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTG 65

Query: 73  GDCMCDVLKQSGRMGIHLNLTRAIPLPAACGIST-SLPDCGIPL---PPGMAPAAVPTTK 132
            +C+C+  K SG +G+ L+L++A  LP+ C ++      CG+ +   PP  AP   PT  
Sbjct: 66  PECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLSPTAG 125

Query: 133 PPTPLPST----KPPTPAPRT 146
              P  S+      P  +PR+
Sbjct: 126 AGAPALSSGANAATPVSSPRS 146

[Close]
BLAST of Lsi09G009670 vs. NCBI nr
Match: gi|778702474|ref|XP_011655206.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 269.6 bits (688), Expect = 6.7e-69
Identity = 186/305 (60.98%), Postives = 217/305 (71.15%), Query Frame = 1 

Query: 1   MAMSMIWSLGVLVTCIAAIASAASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKA 60
           M M MI +LG+ +TCI AIASA SPSP  +A DCS V+FQML C DY+ IGS KANAS  
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAGSPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANASLV 60

Query: 61  CCKVVGDVLKSKGDCMCDVLKQSGRMGIHLNLTRAIPLPAACGISTSLPDCGIPLPPGMA 120
           CC+V+ + L+ + DCMCDVLKQS +MGIHLN +RAI LPAACGISTSLPDC I L  GMA
Sbjct: 61  CCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQGMA 120

Query: 121 PAAVPTTKPPTPLPSTKPPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPRTKAPTPAPT 180
           PA         P+PSTK PT AP  K PT AP T+ PTPAP T+ PTPAP  K PTPAP 
Sbjct: 121 PA---------PIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPF 180

Query: 181 TKAPTPAPTTKAPTPAPTTKAPTPAPSTQAPTPSPSTQAPTPAPTTKAPTPAPGTLVHHV 240
           T+ PTPAP TK PTPAP T +PTPAP+ QAP+P+ + QAP+P PTT A  PAP       
Sbjct: 181 TRTPTPAPLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVASVPAP------- 240

Query: 241 NEFNPPIAAPPAPEMPPSSGPTAAPTPSHDNMGPSGEDSPAPSPSA-APSFTTSSNLVVL 300
              NPPIA PPAP  P  + P++   PS+   GPSGEDSP P+PSA +P F +SSNL+VL
Sbjct: 241 --VNPPIATPPAPPAPEVT-PSSDLAPSN---GPSGEDSPMPTPSAGSPYFPSSSNLIVL 283

Query: 301 LLTLL 305
           LLTLL
Sbjct: 301 LLTLL 283

[Close]
BLAST of Lsi09G009670 vs. NCBI nr
Match: gi|659121055|ref|XP_008460480.1| (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo])

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 161/306 (52.61%), Postives = 200/306 (65.36%), Query Frame = 1 

Query: 1   MAMSMIWSLGVLVTCIAAIASA--ASPSPSPSAADCSAVMFQMLECADYIMIGSRKANAS 60
           M M MI +L + +TCI AIASA   SPSP P A DCS ++F +L C DY+ IGS KANAS
Sbjct: 1   MTMGMISNLSLFLTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANAS 60

Query: 61  KACCKVVGDVLKSKGDCMCDVLKQSGRMGIHLNLTRAIPLPAACGISTSLPDCGIPLPPG 120
           + CC+V+ + ++   +CMCD LKQS +MGIHLN+TR + LPAACGI  SLP+C I LPP 
Sbjct: 61  QVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPECDIALPPA 120

Query: 121 MAPAAVPTTKPPTPLPSTKPPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPRTKAPTPA 180
                                 P P TKAPTPAP TK PTPAP T +PTPAP  +AP+ A
Sbjct: 121 ----------------------PVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLA 180

Query: 181 PTTKAPTPAPTTKAPTPAPTTKAPTPAPSTQAPTPSPSTQAPTPAPTTKAPTPAPGTLVH 240
           P  +AP+ AP  +AP+P P  +AP+P P+ QAP+P+ + QAP+PAPTT  P P P     
Sbjct: 181 PNKQAPSLAPNKQAPSPIPNKQAPSPTPNKQAPSPTSNKQAPSPAPTTVVPAPTP----- 240

Query: 241 HVNEFNPPIAAPPAPEMPPSSGPTAAPTPSHDNMGPSGEDSPAPSPSAAPSFTTSSNLVV 300
                N PI +PPAPE+PPSS      TPS+   GPSGEDSP P+PS +P FT+SS L+V
Sbjct: 241 ----VNHPIVSPPAPEVPPSSD----LTPSN---GPSGEDSPTPAPSGSPCFTSSSYLIV 268

Query: 301 LLLTLL 305
           LLL LL
Sbjct: 301 LLLALL 268

[Close]
BLAST of Lsi09G009670 vs. NCBI nr
Match: gi|158289846|ref|XP_311477.4| (AGAP010468-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 94.0 bits (232), Expect = 5.0e-16
Identity = 60/76 (78.95%), Postives = 72/76 (94.74%), Query Frame = 1 

Query: 155 KAPTPAPTTKAPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPSTQAPTPS 214
           +APTPAPTT+APTPAP T+ PTPAPTT+APTPAPTT+APTPAP+T+APTPAP+T+APTP+
Sbjct: 82  EAPTPAPTTEAPTPAPTTEVPTPAPTTEAPTPAPTTEAPTPAPSTEAPTPAPTTEAPTPA 141

Query: 215 PSTQAPTPAPTTKAPT 231
           PST+APTPAPTT  P+
Sbjct: 142 PSTEAPTPAPTTSTPS 157

[Close]
BLAST of Lsi09G009670 vs. NCBI nr
Match: gi|971519647|dbj|GAQ78588.1| (hypothetical protein KFL_000150420 [Klebsormidium flaccidum])

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-15
Identity = 69/88 (78.41%), Postives = 74/88 (84.09%), Query Frame = 1 

Query: 149 TPAPTTKAPTPAPTTKAPTPAPRTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPST 208
           TPAPTTKAPTPAPTTKAPTPAP TKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAP+T
Sbjct: 119 TPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPTTKAPTPAPTT 178

Query: 209 QAPTPSPSTQAPTPAPTTKAPTPAPGTL 237
           +APTP+P++      P      PA GTL
Sbjct: 179 KAPTPAPTSSGVGGCPA--GWLPAVGTL 204

[Close]
BLAST of Lsi09G009670 vs. NCBI nr
Match: gi|672178385|ref|XP_008809325.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Phoenix dactylifera])

HSP 1 Score: 90.9 bits (224), Expect = 4.2e-15
Identity = 41/109 (37.61%), Postives = 71/109 (65.14%), Query Frame = 1 

Query: 5   MIWSLGVLVTCIAAIASAASPSPSPSAADCSAVMFQMLECADYIMIGSRKANASKACCKV 64
           ++W L +L T   A+++AAS SP PS+ +C +V+  M++C  Y+ +GS+++   + CC+ 
Sbjct: 4   LMWVLSLLATL--ALSAAASSSPPPSSVNCDSVVMDMMDCISYVSMGSKQSRPDEECCRG 63

Query: 65  VGDVLKSKGDCMCDVLKQSGRMGIHLNLTRAIPLPAACGISTSLPDCGI 114
           V  V+ +   C+C  L+++  MG+ L++ RA  LPAAC I  S+ DCG+
Sbjct: 64  VSSVVNTSPTCLCAALQEAMNMGVDLDMKRAAGLPAACSIKVSVGDCGV 110

The following BLAST results are available for this feature:
BLAST of Lsi09G009670 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTL5_ARATH5.6e-0731.11Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia... [more]
BLAST of Lsi09G009670 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN80_CUCSA4.6e-6960.98Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1[more]
H3GVS3_PHYRM7.0e-1747.83Uncharacterized protein OS=Phytophthora ramorum PE=4 SV=1[more]
Q7PRG9_ANOGA3.5e-1678.95AGAP010468-PA (Fragment) OS=Anopheles gambiae GN=AgaP_AGAP010468 PE=4 SV=4[more]
K9VI87_9CYAN5.6e-1458.12Conserved repeat domain protein OS=Oscillatoria nigro-viridis PCC 7112 GN=Osc711... [more]
T0QXX7_9STRA7.3e-1447.35Uncharacterized protein OS=Saprolegnia diclina VS20 GN=SDRG_02950 PE=4 SV=1[more]
BLAST of Lsi09G009670 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G08670.15.0e-1435.29 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G64080.13.1e-0831.11 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G13820.11.0e-0626.95 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Lsi09G009670 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778702474|ref|XP_011655206.1|6.7e-6960.98PREDICTED: extensin [Cucumis sativus][more]
gi|659121055|ref|XP_008460480.1|1.2e-5752.61PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo][more]
gi|158289846|ref|XP_311477.4|5.0e-1678.95AGAP010468-PA [Anopheles gambiae str. PEST][more]
gi|971519647|dbj|GAQ78588.1|1.9e-1578.41hypothetical protein KFL_000150420 [Klebsormidium flaccidum][more]
gi|672178385|ref|XP_008809325.1|4.2e-1537.61PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Phoenix d... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006869 lipid transport
cellular_component GO:0031224 intrinsic component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0031225 anchored component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0008289 lipid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G009670.1Lsi09G009670.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 16..111
score: 1.1
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainSMARTSM00499aai_6coord: 34..111
score: 8.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 33..109
score: 2.13
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 19..31
score: 2.8E-18coord: 109..130
score: 2.8E-18coord: 132..148
score: 2.8E-18coord: 149..166
score: 2.8E-18coord: 168..193
score: 2.8
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 32..109
score: 1.3
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 1..161
score: 1.5
NoneNo IPR availablePANTHERPTHR33044:SF27BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 1..161
score: 1.5