CmaCh15G007210 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh15G007210
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	Cma_Chr15 : 3492675 .. 3493547 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCCGTTGCGGGTGCGACATCGCCATCGCCGGCGCCGAGTGCGTTGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCACGAAGGCGAATGCCTCTACGGATTGCTGCAAAGTGGTTAAAGATGTGATGAAATCGAAAGGCGATTGTATGTGCGATGCGTTGAAGCAGAACGGGAGAATGGGGATTCAATTGAATCGAACCAGGGCACTCGGCCTTCCTGCCGCCTGCGGAAGCCCTACTTCACTTGCCGATTGCACCAGTGCGTTTTGTTCTTGTTTTGAAATCGATCAATTTTTTATTTTCTGATTTTGAGGATTTTTTTTTTTCCTCTCTCTTTTTGGCAGTTGCTGTTTCTCCGGCTATGGCATCTCCTCCAGTTCCGAGTGCTAAAGCGCCAAAGCCAGCAAAAAGAGCGAAAGTGCCATCAGCAGTCCCATGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATACTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACCAGAATTGGCGCCAAGCAGAGTCCCAGTGGAGGCTCCAGCACCTTCAGACGACGAAATGGGACCGTCTGGTGAGGACTCGTCGGCATCGGCTCTATCTTTCACCACTTGCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTCGGAGCTTTGTGATGCTCCTTTTTAGAAGCCATCTACGTCATTTTTGACCCGTTTTTCATAATTTTTTTTTTTTTTCAATTTCCCCTATTGAAGTTAGGAAAATATTTCTTTCCCGT

mRNA sequence

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCCGTTGCGGGTGCGACATCGCCATCGCCGGCGCCGAGTGCGTTGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCACGAAGGCGAATGCCTCTACGGATTGCTGCAAAGTGGTTAAAGATGTGATGAAATCGAAAGGCGATTGTATGTGCGATGCGTTGAAGCAGAACGGGAGAATGGGGATTCAATTGAATCGAACCAGGGCACTCGGCCTTCCTGCCGCCTGCGGAAGCCCTACTTCACTTGCCGATTGCACCATTGCTGTTTCTCCGGCTATGGCATCTCCTCCAGTTCCGAGTGCTAAAGCGCCAAAGCCAGCAAAAAGAGCGAAAGTGCCATCAGCAGTCCCATGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATACTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACCAGAATTGGCGCCAAGCAGAGTCCCAGTGGAGGCTCCAGCACCTTCAGACGACGAAATGGGACCGTCTGGTGAGGACTCGTCGGCATCGGCTCTATCTTTCACCACTTGCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTCGGAGCTTTGTGATGCTCCTTTTTAGAAGCCATCTACGTCATTTTTGACCCGTTTTTCATAATTTTTTTTTTTTTTCAATTTCCCCTATTGAAGTTAGGAAAATATTTCTTTCCCGT

Coding sequence (CDS)

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCCGTTGCGGGTGCGACATCGCCATCGCCGGCGCCGAGTGCGTTGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCACGAAGGCGAATGCCTCTACGGATTGCTGCAAAGTGGTTAAAGATGTGATGAAATCGAAAGGCGATTGTATGTGCGATGCGTTGAAGCAGAACGGGAGAATGGGGATTCAATTGAATCGAACCAGGGCACTCGGCCTTCCTGCCGCCTGCGGAAGCCCTACTTCACTTGCCGATTGCACCATTGCTGTTTCTCCGGCTATGGCATCTCCTCCAGTTCCGAGTGCTAAAGCGCCAAAGCCAGCAAAAAGAGCGAAAGTGCCATCAGCAGTCCCATGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATACTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACCAGAATTGGCGCCAAGCAGAGTCCCAGTGGAGGCTCCAGCACCTTCAGACGACGAAATGGGACCGTCTGGTGAGGACTCGTCGGCATCGGCTCTATCTTTCACCACTTGCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTCGGAGCTTTGTGA

Protein sequence

MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPAMASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPPSPPAPPPELAPSRVPVEAPAPSDDEMGPSGEDSSASALSFTTCSSLIVLPLALLASFGAL

Homology

[Close]

BLAST of CmaCh15G007210 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.6e-11
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 1


Query: 7   PSLALFTICIAAVAVAGAT---SPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDC 66
           P   +  + +++V+V GA+   + +PAPS +DCS ++  M  C+ + + G T A     C
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPS-VDCSTLILNMADCLSFVSSGGTVAKPEGTC 71

Query: 67  CKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACG-SPTSLADCTIAVSPAMA 126
           C  +K V+K+   C+C+A K +  +G+ LN T+A  LPAAC     S+A C ++V+P+ A
Sbjct: 72  CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTA 131

Query: 127 SPPVPSAKAPKP 135
               P   A  P
Sbjct: 132 PGLAPGVAAAGP 142

[Close]

BLAST of CmaCh15G007210 vs. Swiss-Prot
Match: NLTL1_ORYSJ (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.1e-07
Identity = 52/137 (37.96%), Postives = 74/137 (54.01%), Query Frame = 1


Query: 11  LFTICIAAVA-VAGATSPSPAPS-ALDCSAVVYQMMPCVEYFTIGSTK-ANASTDCCKVV 70
           L  + +AAVA V GAT+ SPAP+ A+DC+A   ++  C++Y T G T  +  S  CC  V
Sbjct: 13  LLVVGLAAVAGVDGATASSPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEV 72

Query: 71  KDVMKSKG--DCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPAMASPP 130
           K  +K      C+C A      + + +N TRAL LPAACG+  S     +A +P+ +  P
Sbjct: 73  KGALKDSAAVGCLCAAFTSK-TLPLPINITRALHLPAACGADASAFSKCLAPAPSPSVAP 132

Query: 131 VPSA----KAPKPAKRA 139
             S+     A  PAK A
Sbjct: 133 GTSSGSGGAAAAPAKGA 148

[Close]

BLAST of CmaCh15G007210 vs. TrEMBL
Match: A0A0A0KN80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-35
Identity = 107/222 (48.20%), Postives = 138/222 (62.16%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANAS 60
           M M +I +L LF  CI A+A AG  SPSP  +A DCS VV+QM+PCV+Y TIGSTKANAS
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAG--SPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPA 120
             CC+V+K+ ++ + DCMCD LKQ+ +MGI LN +RA+ LPAACG  TSL DC IA++  
Sbjct: 61  LVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQG 120

Query: 121 MASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPPSPPAP---PPELA 180
           MA  P+PS KAP  A  AK P+  P T+ P PAP + +PT  PV     PAP    P  A
Sbjct: 121 MAPAPIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPFTRTPTPA 180

Query: 181 P-SRVPVEA-------PAPSDDEMGPSGEDSSASALSFTTCS 212
           P ++ P  A       PAP++    P+  + + S    T  S
Sbjct: 181 PLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVAS 220

[Close]

BLAST of CmaCh15G007210 vs. TrEMBL
Match: A0A165ZEY5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008708 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.5e-12
Identity = 55/138 (39.86%), Postives = 68/138 (49.28%), Query Frame = 1


Query: 26  SPSPAP----SALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDVMKSKGDCMCDA 85
           SP+PAP    S  DC A+VYQMM C  Y   G  +      CC   K +MK    C+C A
Sbjct: 38  SPTPAPHSGNSGSDCGAMVYQMMDCAPYLANGGKQTKPEPMCCSGFKKIMKKNETCLCAA 97

Query: 86  LKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPAMASPPVPSAKAPKPAKRAKVP 145
           LK    +GI LN TRA  LP+ACG  + L  C I         P P+   P P    + P
Sbjct: 98  LKSTAGLGISLNVTRAKNLPSACGVSSKLPKCQIPDDSHHQPSPAPA--NPTPKHHIQAP 157

Query: 146 SAVPCTKPPKPAPNSTSP 160
           S    +K PKPAP + +P
Sbjct: 158 SK---SKSPKPAPEAPAP 170

[Close]

BLAST of CmaCh15G007210 vs. TrEMBL
Match: A0A022PSN0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014671mg PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 1


Query: 11  LFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDV 70
           LF I  A +A A + + S     +DCS++V +M  C+ Y T G T A  +  CC  +K V
Sbjct: 9   LFCILFALLAAAISAAHSAPTPGVDCSSLVLEMADCLPYVTEGGTAAKPNGQCCSGLKTV 68

Query: 71  MKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACG-SPTSLADCTIAVSPAMASPPV--- 130
           +K+  DC+C+A K + ++G+ LN T+AL LP AC  S  S+++C ++   A A  P+   
Sbjct: 69  LKTDADCLCEAFKNSAQLGVTLNLTKALALPTACHVSAPSVSNCALSGGAAPAFSPLAAV 128

Query: 131 -PSAKAPKPAKRAKVPSAVPCTKP 150
            PS  A  PA    V  A P   P
Sbjct: 129 SPSPAAVAPAAGGGVNEAAPAPSP 152

[Close]

BLAST of CmaCh15G007210 vs. TrEMBL
Match: A9PFU8_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.5e-11
Identity = 49/145 (33.79%), Postives = 79/145 (54.48%), Query Frame = 1


Query: 9   LALFTICIAAVAVAGATSPS-PAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVV 68
           L+L  +C  +++    +  S PAPS++DC+ +++ M  C+ + + GST A     CC  +
Sbjct: 7   LSLILLCTFSISCCSQSPASAPAPSSVDCANLIFSMADCLSFVSNGSTAAKPEGKCCAGL 66

Query: 69  KDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAAC---GSPTSLADCTIAVSPAMASP 128
           K V+ +K +C+C+A K + ++GI LN T+AL LP+ C     P S  +C +A+SP+ A  
Sbjct: 67  KTVLSTKAECLCEAFKSSAQIGIVLNVTKALSLPSVCKIHAPPAS--NCGLAISPSGARA 126

Query: 129 PVPSAKAPKPAKRAKVPSAVPCTKP 150
           P P   AP  A         P   P
Sbjct: 127 PAPGGSAPGLAVNGGGNEQAPAPSP 149

[Close]

BLAST of CmaCh15G007210 vs. TrEMBL
Match: A0A0A0K5X6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061200 PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.2e-11
Identity = 56/158 (35.44%), Postives = 92/158 (58.23%), Query Frame = 1


Query: 7   PSLALFTICIAAVAVAGATSPSPAPS-ALDCSAVVYQMMPCVEYFTIGSTKANASTDCCK 66
           P LALF++   A+  +  ++ + AP+  +DCS+++  M  C+ + +  ST +     CC 
Sbjct: 6   PFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQGTCCS 65

Query: 67  VVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACG-SPTSLADCTIAVSPAMASP 126
            +K V+K+  DC+C+A K + ++G+ LN T+AL LPAAC  S  + ++C +++SPA +SP
Sbjct: 66  GLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISPA-SSP 125

Query: 127 PVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHT 163
            V  + APK A+ A   S V       PAP  +  T T
Sbjct: 126 AVTPSGAPKSAEAA---SPVVSEPTGAPAPGKSGATAT 159

[Close]

BLAST of CmaCh15G007210 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 58/148 (39.19%), Postives = 77/148 (52.03%), Query Frame = 1


Query: 26  SPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDVMKSKGDCMCDALKQN 85
           +P+P PS+ DCS V+Y MM C+ Y  +GS +      CC  ++ V++    C+C  L   
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 86  GRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPAM---ASPPVPSAKAPKPAKRAKVPS 145
           G MGI+LN TRAL  P AC    +   C I  S A    ASP  PSA AP  +     PS
Sbjct: 98  GEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVSPSAGAPTTS-----PS 157

Query: 146 AVPCTKPPKPAPNSTSPTHTP-VSPPSP 170
           A    K P+ +  S S   TP ++ PSP
Sbjct: 158 A---AKSPETSATSPSSDETPSMTAPSP 177

[Close]

BLAST of CmaCh15G007210 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 71.2 bits (173), Expect = 9.0e-13
Identity = 45/132 (34.09%), Postives = 74/132 (56.06%), Query Frame = 1


Query: 7   PSLALFTICIAAVAVAGAT---SPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDC 66
           P   +  + +++V+V GA+   + +PAPS +DCS ++  M  C+ + + G T A     C
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPS-VDCSTLILNMADCLSFVSSGGTVAKPEGTC 71

Query: 67  CKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACG-SPTSLADCTIAVSPAMA 126
           C  +K V+K+   C+C+A K +  +G+ LN T+A  LPAAC     S+A C ++V+P+ A
Sbjct: 72  CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTA 131

Query: 127 SPPVPSAKAPKP 135
               P   A  P
Sbjct: 132 PGLAPGVAAAGP 142

[Close]

BLAST of CmaCh15G007210 vs. TAIR10
Match: AT1G36150.1 (AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-11
Identity = 60/190 (31.58%), Postives = 97/190 (51.05%), Query Frame = 1


Query: 26  SPSPAPS-ALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDVMKSKGDCMCDALKQ 85
           +P+P PS + DCS+V+Y M+ C+ + T+GST  + +  CC  VK V+     C+C AL+ 
Sbjct: 34  APTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALES 93

Query: 86  NGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPAMASPPVPSAKAPKPA-KRAKVPSA 145
           +  MG  L+ T+AL +P  C  P    +C ++ +PA ++P  P  ++P  +   AK P+ 
Sbjct: 94  SREMGFVLDDTKALAMPKICNVPID-PNCDVS-TPAASTPVSPPVESPTTSPSSAKSPAI 153

Query: 146 VPCTKPPKPAPNSTSPTHTPVSPPSPPAPPPELAPSRVPVEAPAPSDDEMGP-SGEDSSA 205
            P +     +P     +  PVS  SPP     ++ S  P    +P+     P     S  
Sbjct: 154 TPSSPAVSHSPPPVRHSSPPVSHSSPP-----VSHSSPPTSRSSPAVSHSSPVVAASSPV 213

Query: 206 SALSFTTCSS 213
            A+S +T SS
Sbjct: 214 KAVSSSTASS 216

[Close]

BLAST of CmaCh15G007210 vs. TAIR10
Match: AT3G22600.1 (AT3G22600.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08
Identity = 35/91 (38.46%), Postives = 49/91 (53.85%), Query Frame = 1


Query: 19  VAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDVMKSKGDCM 78
           +AV  +T  S   S   C+  +  M PC+ Y T  ST  N    CC  +  V++S  DC+
Sbjct: 14  MAVMSSTMVSAQSS---CTNALISMSPCLNYITGNSTSPNQQ--CCNQLSRVVQSSPDCL 73

Query: 79  CDALKQNG-RMGIQLNRTRALGLPAACGSPT 109
           C  L   G ++GI +N+T+ALGLP AC   T
Sbjct: 74  CQVLNGGGSQLGINVNQTQALGLPRACNVQT 99

[Close]

BLAST of CmaCh15G007210 vs. NCBI nr
Match: gi|659121055|ref|XP_008460480.1| (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo])

HSP 1 Score: 160.2 bits (404), Expect = 4.2e-36
Identity = 123/278 (44.24%), Postives = 153/278 (55.04%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANAS 60
           M M +I +L+LF  CI A+A A   SPSP P A DCS +V+ ++PCV+Y TIGSTKANAS
Sbjct: 1   MTMGMISNLSLFLTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPA 120
             CC+V+K+ M+   +CMCD LKQ+ +MGI LN TR +GLPAACG P SL +C IA+ PA
Sbjct: 61  QVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPECDIALPPA 120

Query: 121 MASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPT-----HTPVSPPSPPAPPP- 180
               PVPS KAP PA   K P+  P T  P PAPN  +P+       P   P+  AP P 
Sbjct: 121 ----PVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAPNKQAPSLAPNKQAPSPI 180

Query: 181 --ELAPSRVP-VEAPAPSDDEMGPS----------------------------------- 228
             + APS  P  +AP+P+ ++  PS                                   
Sbjct: 181 PNKQAPSPTPNKQAPSPTSNKQAPSPAPTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPSN 240

[Close]

BLAST of CmaCh15G007210 vs. NCBI nr
Match: gi|778702474|ref|XP_011655206.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35
Identity = 107/222 (48.20%), Postives = 138/222 (62.16%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANAS 60
           M M +I +L LF  CI A+A AG  SPSP  +A DCS VV+QM+PCV+Y TIGSTKANAS
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAG--SPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPA 120
             CC+V+K+ ++ + DCMCD LKQ+ +MGI LN +RA+ LPAACG  TSL DC IA++  
Sbjct: 61  LVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQG 120

Query: 121 MASPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHTPVSPPSPPAP---PPELA 180
           MA  P+PS KAP  A  AK P+  P T+ P PAP + +PT  PV     PAP    P  A
Sbjct: 121 MAPAPIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPFTRTPTPA 180

Query: 181 P-SRVPVEA-------PAPSDDEMGPSGEDSSASALSFTTCS 212
           P ++ P  A       PAP++    P+  + + S    T  S
Sbjct: 181 PLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVAS 220

[Close]

BLAST of CmaCh15G007210 vs. NCBI nr
Match: gi|672178385|ref|XP_008809325.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Phoenix dactylifera])

HSP 1 Score: 84.7 bits (208), Expect = 2.2e-13
Identity = 39/100 (39.00%), Postives = 63/100 (63.00%), Query Frame = 1


Query: 16  IAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVKDVMKSKG 75
           +A +A++ A S SP PS+++C +VV  MM C+ Y ++GS ++    +CC+ V  V+ +  
Sbjct: 11  LATLALSAAASSSPPPSSVNCDSVVMDMMDCISYVSMGSKQSRPDEECCRGVSSVVNTSP 70

Query: 76  DCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTI 116
            C+C AL++   MG+ L+  RA GLPAAC    S+ DC +
Sbjct: 71  TCLCAALQEAMNMGVDLDMKRAAGLPAACSIKVSVGDCGV 110

[Close]

BLAST of CmaCh15G007210 vs. NCBI nr
Match: gi|720042289|ref|XP_010269190.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Nelumbo nucifera])

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 79/224 (35.27%), Postives = 111/224 (49.55%), Query Frame = 1


Query: 12  FTICIAAV---AVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANASTDCCKVVK 71
           F +CI A+   A+      SP PS +DCS V   M  C+ Y + GST +     CC  +K
Sbjct: 7   FVVCILAISIIAIGFVDCASPTPS-VDCSTVFLNMADCLSYVSSGSTVSKPQGACCNGLK 66

Query: 72  DVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACG-SPTSLADCTIAVSPAMASPPVP 131
            V+ +K +C+C A   + + G  LN+T+A GLPAACG S  +  +C ++ S A +SPP P
Sbjct: 67  TVLNTKPECLCQAFSNSAQFGFTLNQTKAAGLPAACGVSAPAATNCGLSGS-APSSPPAP 126

Query: 132 SAKAPKPAKRA---KVPSAVPCTKPPKP---APNSTSPTHTPVSPPSPPAPPPE-LAPSR 191
           S K P P  ++     PS  P  K P     AP  + P   P +P SPP P PE    ++
Sbjct: 127 SPKTPSPPPKSPTTPAPSPPPVAKAPASNVGAPPQSGP--APSAPVSPPVPSPESYTTAK 186

Query: 192 VPVEAPAPSDDEMGP-----SGEDSSASALSFTTCSSLIVLPLA 220
            P  AP    +   P     S   SSA A   +T  S +  P++
Sbjct: 187 SPAPAPVSVSESPAPVPASESPSSSSAEASVSSTVGSPVPTPVS 226

[Close]

BLAST of CmaCh15G007210 vs. NCBI nr
Match: gi|695076686|ref|XP_009385645.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 80.1 bits (196), Expect = 5.5e-12
Identity = 84/226 (37.17%), Postives = 114/226 (50.44%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSALDCSAVVYQMMPCVEYFTIGSTKANAS 60
           MA  ++ +     IC  + + AGA S SPAP   DCS +V  +M C  Y T  ST    S
Sbjct: 1   MARIVVLATGFMAICALSFSPAGAASLSPAPPPSDCSDIVSALMDCFSYVTNDSTTPCPS 60

Query: 61  TDCCKVVKDVMKSKGDCMCDALKQNGRMGIQLNRTRALGLPAACGSPTSLADCTIAVSPA 120
             CC  V DV+    +C+C  L++   +G+ +N TRAL LPAAC        C  A SP+
Sbjct: 61  RSCCAGVADVVTESPECICQTLQEANDLGVAVNMTRALDLPAACSVKAPKIHCD-ASSPS 120

Query: 121 MASPPVPSAKAPKPAKRAKVPSAVPCTKP-PKPAPNSTSPTHTPV--SPPSPPAPPPELA 180
            A+PP P   +P P+   + PS VP   P P P P S +P  +PV   PP+ P  PP   
Sbjct: 121 -AAPPSPPRPSPGPSPSPR-PSPVPSPTPRPSPVP-SPNPRPSPVLSPPPTTPPSPPPAT 180

Query: 181 PSRVPVEAPAPSDDEMGPSGEDSSASALSFTTCSSLIVLPLALLAS 224
           PS  P   P P +  + PS   +SA   S     + +V+ +A LAS
Sbjct: 181 PSPTPA-TPLP-NSAVTPSPTPASAPMSSEAPRLASVVVAIAGLAS 220

The following BLAST results are available for this feature:

BLAST of CmaCh15G007210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTL5_ARATH	1.6e-11	34.09	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia...	[more]
NLTL1_ORYSJ	3.1e-07	37.96	Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LT...	[more]

BLAST of CmaCh15G007210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN80_CUCSA	2.5e-35	48.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1	[more]
A0A165ZEY5_DAUCA	6.5e-12	39.86	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008708 PE=4 SV=1	[more]
A0A022PSN0_ERYGU	1.5e-11	36.81	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014671mg PE=3 SV=1	[more]
A9PFU8_POPTR	2.5e-11	33.79	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
A0A0A0K5X6_CUCSA	4.2e-11	35.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061200 PE=3 SV=1	[more]

BLAST of CmaCh15G007210 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G08670.1	1.4e-13	39.19	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G64080.1	9.0e-13	34.09	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G36150.1	2.9e-11	31.58	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT3G22600.1	1.8e-08	38.46	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CmaCh15G007210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121055\|ref\|XP_008460480.1\|	4.2e-36	44.24	PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo]	[more]
gi\|778702474\|ref\|XP_011655206.1\|	3.5e-35	48.20	PREDICTED: extensin [Cucumis sativus]	[more]
gi\|672178385\|ref\|XP_008809325.1\|	2.2e-13	39.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Phoenix d...	[more]
gi\|720042289\|ref\|XP_010269190.1\|	2.5e-12	35.27	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Nelumbo n...	[more]
gi\|695076686\|ref\|XP_009385645.1\|	5.5e-12	37.17	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Musa acum...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031225	anchored component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh15G007210.1	CmaCh15G007210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..113 score: 1.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..113 score: 3.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 35..111 score: 3.66
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..110 score: 1.3
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..140 score: 7.6
None	No IPR available	PANTHER	PTHR33044:SF27	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 1..140 score: 7.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh15G007210	Cla002146	Watermelon (97103) v1	cmawmB263
CmaCh15G007210	Csa5G396010	Cucumber (Chinese Long) v2	cmacuB293
CmaCh15G007210	MELO3C022792	Melon (DHL92) v3.5.1	cmameB252
CmaCh15G007210	ClCG03G009020	Watermelon (Charleston Gray)	cmawcgB261
CmaCh15G007210	CSPI05G14500	Wild cucumber (PI 183967)	cmacpiB297
CmaCh15G007210	CmoCh15G007410	Cucurbita moschata (Rifu)	cmacmoB287
CmaCh15G007210	CmoCh04G024220	Cucurbita moschata (Rifu)	cmacmoB309
CmaCh15G007210	Lsi09G009670	Bottle gourd (USVL1VR-Ls)	cmalsiB268
CmaCh15G007210	Cp4.1LG13g05000	Cucurbita pepo (Zucchini)	cmacpeB305
CmaCh15G007210	Cp4.1LG01g20180	Cucurbita pepo (Zucchini)	cmacpeB318
CmaCh15G007210	MELO3C022792.2	Melon (DHL92) v3.6.1	cmamedB287
CmaCh15G007210	CsaV3_5G023600	Cucumber (Chinese Long) v3	cmacucB0343
CmaCh15G007210	Cla97C03G060200	Watermelon (97103) v2	cmawmbB300
CmaCh15G007210	Bhi12G001109	Wax gourd	cmawgoB0373
CmaCh15G007210	CsGy5G014460	Cucumber (Gy14) v2	cgybcmaB600
CmaCh15G007210	Carg01487	Silver-seed gourd	carcmaB1148
CmaCh15G007210	Carg18246	Silver-seed gourd	carcmaB0737

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh15G007210	Cucurbita pepo (Zucchini)	cmacpeB325
CmaCh15G007210	Bottle gourd (USVL1VR-Ls)	cmalsiB282
CmaCh15G007210	Cucumber (Gy14) v2	cgybcmaB489
CmaCh15G007210	Silver-seed gourd	carcmaB0941
CmaCh15G007210	Cucumber (Chinese Long) v3	cmacucB0338
CmaCh15G007210	Watermelon (97103) v2	cmawmbB298
CmaCh15G007210	Wax gourd	cmawgoB0409
CmaCh15G007210	Cucurbita maxima (Rimu)	cmacmaB307
CmaCh15G007210	Cucurbita maxima (Rimu)	cmacmaB325
CmaCh15G007210	Cucumber (Gy14) v1	cgycmaB0019
CmaCh15G007210	Cucurbita moschata (Rifu)	cmacmoB294
CmaCh15G007210	Wild cucumber (PI 183967)	cmacpiB294
CmaCh15G007210	Cucumber (Chinese Long) v2	cmacuB289
CmaCh15G007210	Melon (DHL92) v3.5.1	cmameB282
CmaCh15G007210	Watermelon (Charleston Gray)	cmawcgB254
CmaCh15G007210	Watermelon (97103) v1	cmawmB264
CmaCh15G007210	Watermelon (97103) v1	cmawmB288