Cp4.1LG01g20180 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g20180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNon-specific lipid-transfer protein-like protein
LocationCp4.1LG01 : 17144303 .. 17144698 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATGGCAATGGCGATGATTCAGAGTTTGGCTCTGTTCTTGACCTGCATTGCAGCGATATGGATTTGCAATGAAAATATAATTGCGAGTGCTGCCTCGCCGTTGTCGCCTCGGCCGAGTGCGGTGGATTGCCCGGCGGTGGTGTATGCGATACTGCCGTGCGTGAATTACATCACGATCGGGAGCACGATGACGATGCCCTCGGAAGTTTGCTGCAAGAATGTGGAAAGTGTGATGAAATGGAATGCTAAATGTATGTGCGTTGGGTTGAAGCAGAGCGAGAGCTTGGGGATTCAATTGAATGTTACTAGAGCGATTGATCTTCCTGCGACTTGTGGAATTTCGACTCCGCTTTCTGATTGCGGCTGTGCGTTTGATTTTATTCTTGTTTGA

mRNA sequence

ATGGCAATGGCAATGGCGATGATTCAGAGTTTGGCTCTGTTCTTGACCTGCATTGCAGCGATATGGATTTGCAATGAAAATATAATTGCGAGTGCTGCCTCGCCGTTGTCGCCTCGGCCGAGTGCGGTGGATTGCCCGGCGGTGGTGTATGCGATACTGCCGTGCGTGAATTACATCACGATCGGGAGCACGATGACGATGCCCTCGGAAGTTTGCTGCAAGAATGTGGAAAGTGTGATGAAATGGAATGCTAAATGTATGTGCGTTGGGTTGAAGCAGAGCGAGAGCTTGGGGATTCAATTGAATGTTACTAGAGCGATTGATCTTCCTGCGACTTGTGGAATTTCGACTCCGCTTTCTGATTGCGGCTGTGCGTTTGATTTTATTCTTGTTTGA

Coding sequence (CDS)

ATGGCAATGGCAATGGCGATGATTCAGAGTTTGGCTCTGTTCTTGACCTGCATTGCAGCGATATGGATTTGCAATGAAAATATAATTGCGAGTGCTGCCTCGCCGTTGTCGCCTCGGCCGAGTGCGGTGGATTGCCCGGCGGTGGTGTATGCGATACTGCCGTGCGTGAATTACATCACGATCGGGAGCACGATGACGATGCCCTCGGAAGTTTGCTGCAAGAATGTGGAAAGTGTGATGAAATGGAATGCTAAATGTATGTGCGTTGGGTTGAAGCAGAGCGAGAGCTTGGGGATTCAATTGAATGTTACTAGAGCGATTGATCTTCCTGCGACTTGTGGAATTTCGACTCCGCTTTCTGATTGCGGCTGTGCGTTTGATTTTATTCTTGTTTGA

Protein sequence

MAMAMAMIQSLALFLTCIAAIWICNENIIASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGISTPLSDCGCAFDFILV
Homology
[Close]
BLAST of Cp4.1LG01g20180 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-12
Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 1 

Query: 30  ASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCV 89
           AS     +P PS VDC  ++  +  C+++++ G T+  P   CC  +++V+K +++C+C 
Sbjct: 29  ASHHHATAPAPS-VDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCE 88

Query: 90  GLKQSESLGIQLNVTRAIDLPATCGISTP-LSDCG 124
             K S SLG+ LN+T+A  LPA C +  P ++ CG
Sbjct: 89  AFKSSASLGVTLNITKASTLPAACKLHAPSIATCG 122

[Close]
BLAST of Cp4.1LG01g20180 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.6e-11
Identity = 29/84 (34.52%), Postives = 54/84 (64.29%), Query Frame = 1 

Query: 41  SAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQ 100
           +AVDC +++  +  C++++T GST+  P   CC  +++V++   +C+C   K S SLG+ 
Sbjct: 23  AAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLT 82

Query: 101 LNVTRAIDLPATCGISTPLS-DCG 124
           L++++A  LP+ C ++ P S  CG
Sbjct: 83  LDLSKAASLPSVCKVAAPPSARCG 106

[Close]
BLAST of Cp4.1LG01g20180 vs. Swiss-Prot
Match: NLTL1_ORYSJ (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.2e-07
Identity = 40/117 (34.19%), Postives = 64/117 (54.70%), Query Frame = 1 

Query: 1   MAMAMAMIQSLALFLTCIAAIWICNENIIASAASPLSPRPSAVDCPAVVYAILPCVNYIT 60
           MA+A        L +  +AA+      +  + AS  +P P AVDC A    +  C++Y+T
Sbjct: 1   MAVAARAAAVACLLVVGLAAV----AGVDGATASSPAPAP-AVDCTAEALKLADCLDYVT 60

Query: 61  IGSTM-TMPSEVCCKNVESVMKWNAK--CMCVGLKQSESLGIQLNVTRAIDLPATCG 115
            G T  + PS++CC  V+  +K +A   C+C     S++L + +N+TRA+ LPA CG
Sbjct: 61  PGKTAPSRPSKLCCGEVKGALKDSAAVGCLCAAFT-SKTLPLPINITRALHLPAACG 111

[Close]
BLAST of Cp4.1LG01g20180 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06
Identity = 27/89 (30.34%), Postives = 48/89 (53.93%), Query Frame = 1 

Query: 34  SPLSPRPSAVDCPAVVYAILPCVNYITIGST--MTMPSEVCCKNVESVMKWNAKCMCVGL 93
           SP S    A DC A +  +  C++Y+T+G       P + CC  +  +++ + +C+C  L
Sbjct: 27  SPSSGPSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLL 86

Query: 94  K--QSESLGIQLNVTRAIDLPATCGISTP 119
               +  LGI+++  +A+ LP  CG+ TP
Sbjct: 87  SGDMAAQLGIKIDKAKALKLPGVCGVITP 115

[Close]
BLAST of Cp4.1LG01g20180 vs. TrEMBL
Match: A0A0A0KN80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.0e-21
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 1 

Query: 3   MAMAMIQSLALFLTCIAAIWICNENIIASAASPLSPRPSAVDCPAVVYAILPCVNYITIG 62
           M M MI +L LFLTCI AI        ASA SP SP  +A DC  VV+ +LPCV+Y+TIG
Sbjct: 1   MTMGMISTLGLFLTCIVAI--------ASAGSP-SPGSNAGDCSEVVFQMLPCVDYLTIG 60

Query: 63  STMTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGISTPLSDC 122
           ST    S VCC+ +++ ++    CMC  LKQS+ +GI LN +RAI LPA CGIST L DC
Sbjct: 61  STKANASLVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDC 114

Query: 123 GCA 126
             A
Sbjct: 121 DIA 114

[Close]
BLAST of Cp4.1LG01g20180 vs. TrEMBL
Match: V4L8N2_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10028961mg PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.0e-17
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1 

Query: 31  SAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCVG 90
           S  +  +P PS  DC  V+Y ++ C++Y+T GS  TMP + CC  +ESV+K+N KC+CVG
Sbjct: 36  SVVATPAPGPSNSDCSTVIYDMMDCLSYLTPGSNDTMPGKACCDGIESVLKYNPKCICVG 95

Query: 91  LKQSESLGIQLNVTRAIDLPATCGISTPLSDCG 124
           L+ S+S+G+ LN TRA+ +P TC I      CG
Sbjct: 96  LQSSQSMGMALNNTRALAVPKTCKIPIAAPHCG 128

[Close]
BLAST of Cp4.1LG01g20180 vs. TrEMBL
Match: A0A164VSI5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021847 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.6e-16
Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 1 

Query: 29  IASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMC 88
           ++ A+   +P P AVDC  VV  ++ C++++T GST++ P   CC  ++SV+K NA+C+C
Sbjct: 19  VSRASHHAAPTP-AVDCSTVVLNMVDCLSFVTSGSTVSKPEGSCCSGLKSVLKSNAECLC 78

Query: 89  VGLKQSESLGIQLNVTRAIDLPATCGISTPLSDCG 124
              K S   G+ LNVT+A+ LPA C ISTP+++CG
Sbjct: 79  EAFKNSAQFGVSLNVTKAMTLPAVCKISTPVNNCG 112

[Close]
BLAST of Cp4.1LG01g20180 vs. TrEMBL
Match: A0A0B0MRV4_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_20828 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 46/118 (38.98%), Postives = 76/118 (64.41%), Query Frame = 1 

Query: 10  SLALFLTCIAAIWIC----NENIIASAASPL-SPRPSAVDCPAVVYAILPCVNYITIGST 69
           SLAL L  I ++W+     + +  ASA SP  SP  S+VDC +++  +  C+++++ GS 
Sbjct: 7   SLALTLAAIISVWLAADAAHHHHTASAPSPSPSPSSSSVDCSSLILNMADCLSFVSSGSE 66

Query: 70  MTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGISTPLSDC 123
           ++ P   CC  +++V+K +A+C+C   K S SLG+ LNVT+A+ LPA C +S P ++C
Sbjct: 67  VSKPEGTCCSGLKTVLKTDAECLCEAYKSSASLGVTLNVTKAMSLPALCKVSAPPTNC 124

[Close]
BLAST of Cp4.1LG01g20180 vs. TrEMBL
Match: G7INT6_MEDTR (Lipid transfer protein OS=Medicago truncatula GN=MTR_2g008580 PE=3 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 48/114 (42.11%), Postives = 71/114 (62.28%), Query Frame = 1 

Query: 14  FLTCIAAIWICNENIIASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCC 73
           F+  I  IW  +    +SA    +P PSA DC  +V  +  C+++++  ST+T PS  CC
Sbjct: 7   FILSIFVIWAVDFPSASSARD--APSPSA-DCSTIVVIMADCLSFVSNDSTITKPSGACC 66

Query: 74  KNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGIST-PLSDCGCAF 127
             +++V+K +  C+C  LK S +LG+ LNVT+A  LPA CG+S  PLS+CGC F
Sbjct: 67  SGLKTVLKTSPTCLCDSLKNSANLGVVLNVTKAATLPAACGLSAPPLSNCGCEF 117

[Close]
BLAST of Cp4.1LG01g20180 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 5.9e-17
Identity = 37/95 (38.95%), Postives = 60/95 (63.16%), Query Frame = 1 

Query: 32  AASPL---SPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMC 91
           A SP+   +P PS+ DC  V+Y+++ C+ Y+ +GS  T P + CC  +E+V+++N +C+C
Sbjct: 32  AKSPVGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCIC 91

Query: 92  VGLKQSESLGIQLNVTRAIDLPATCGISTPLSDCG 124
            GL  +  +GI+LN TRA+  P  C +S     CG
Sbjct: 92  AGLVSAGEMGIELNSTRALATPKACKLSIAPPHCG 126

[Close]
BLAST of Cp4.1LG01g20180 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13
Identity = 34/95 (35.79%), Postives = 58/95 (61.05%), Query Frame = 1 

Query: 30  ASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCV 89
           AS     +P PS VDC  ++  +  C+++++ G T+  P   CC  +++V+K +++C+C 
Sbjct: 29  ASHHHATAPAPS-VDCSTLILNMADCLSFVSSGGTVAKPEGTCCSGLKTVLKADSQCLCE 88

Query: 90  GLKQSESLGIQLNVTRAIDLPATCGISTP-LSDCG 124
             K S SLG+ LN+T+A  LPA C +  P ++ CG
Sbjct: 89  AFKSSASLGVTLNITKASTLPAACKLHAPSIATCG 122

[Close]
BLAST of Cp4.1LG01g20180 vs. TAIR10
Match: AT1G36150.1 (AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.4 bits (176), Expect = 2.3e-13
Identity = 28/80 (35.00%), Postives = 56/80 (70.00%), Query Frame = 1 

Query: 37  SPRPS-AVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCVGLKQSE 96
           +P+PS + DC +V+Y+++ C++++T+GST   P++ CC  V++V+ ++ KC+C  L+ S 
Sbjct: 36  TPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSR 95

Query: 97  SLGIQLNVTRAIDLPATCGI 116
            +G  L+ T+A+ +P  C +
Sbjct: 96  EMGFVLDDTKALAMPKICNV 115

[Close]
BLAST of Cp4.1LG01g20180 vs. TAIR10
Match: AT2G13820.1 (AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 68.9 bits (167), Expect = 2.6e-12
Identity = 29/84 (34.52%), Postives = 54/84 (64.29%), Query Frame = 1 

Query: 41  SAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQ 100
           +AVDC +++  +  C++++T GST+  P   CC  +++V++   +C+C   K S SLG+ 
Sbjct: 23  AAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLT 82

Query: 101 LNVTRAIDLPATCGISTPLS-DCG 124
           L++++A  LP+ C ++ P S  CG
Sbjct: 83  LDLSKAASLPSVCKVAAPPSARCG 106

[Close]
BLAST of Cp4.1LG01g20180 vs. TAIR10
Match: AT5G09370.1 (AT5G09370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11
Identity = 32/91 (35.16%), Postives = 55/91 (60.44%), Query Frame = 1 

Query: 28  IIASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCM 87
           ++ S +SP      A DC  +V  + PC+ +I+IG T   P+  CC ++++++     C+
Sbjct: 13  LVLSVSSPYVH--GASDCDTLVITLFPCLPFISIGGTADTPTASCCSSLKNILDTKPICL 72

Query: 88  CVGLKQSESLGIQLNVTRAIDLPATCGISTP 119
           C GLK++  LGI+LNVT++  LP  C ++ P
Sbjct: 73  CEGLKKA-PLGIKLNVTKSATLPVACKLNAP 100

[Close]
BLAST of Cp4.1LG01g20180 vs. NCBI nr
Match: gi|659121055|ref|XP_008460480.1| (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 5.8e-22
Identity = 63/124 (50.81%), Postives = 82/124 (66.13%), Query Frame = 1 

Query: 3   MAMAMIQSLALFLTCIAAIWICNENIIASAASPL-SPRPSAVDCPAVVYAILPCVNYITI 62
           M M MI +L+LFLTCI AI        ASA  P  SP P A DC  +V+ ILPCV+Y+TI
Sbjct: 1   MTMGMISNLSLFLTCIVAI--------ASANPPSPSPGPGAGDCSVLVFHILPCVDYLTI 60

Query: 63  GSTMTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGISTPLSD 122
           GST    S+VCC+ +++ M+ +A+CMC  LKQS+ +GI LN+TR + LPA CGI   L +
Sbjct: 61  GSTKANASQVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPE 116

Query: 123 CGCA 126
           C  A
Sbjct: 121 CDIA 116

[Close]
BLAST of Cp4.1LG01g20180 vs. NCBI nr
Match: gi|778702474|ref|XP_011655206.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 110.2 bits (274), Expect = 2.9e-21
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 1 

Query: 3   MAMAMIQSLALFLTCIAAIWICNENIIASAASPLSPRPSAVDCPAVVYAILPCVNYITIG 62
           M M MI +L LFLTCI AI        ASA SP SP  +A DC  VV+ +LPCV+Y+TIG
Sbjct: 1   MTMGMISTLGLFLTCIVAI--------ASAGSP-SPGSNAGDCSEVVFQMLPCVDYLTIG 60

Query: 63  STMTMPSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGISTPLSDC 122
           ST    S VCC+ +++ ++    CMC  LKQS+ +GI LN +RAI LPA CGIST L DC
Sbjct: 61  STKANASLVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDC 114

Query: 123 GCA 126
             A
Sbjct: 121 DIA 114

[Close]
BLAST of Cp4.1LG01g20180 vs. NCBI nr
Match: gi|567164219|ref|XP_006397274.1| (hypothetical protein EUTSA_v10028961mg [Eutrema salsugineum])

HSP 1 Score: 96.3 bits (238), Expect = 4.3e-17
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 1 

Query: 31  SAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMCVG 90
           S  +  +P PS  DC  V+Y ++ C++Y+T GS  TMP + CC  +ESV+K+N KC+CVG
Sbjct: 36  SVVATPAPGPSNSDCSTVIYDMMDCLSYLTPGSNDTMPGKACCDGIESVLKYNPKCICVG 95

Query: 91  LKQSESLGIQLNVTRAIDLPATCGISTPLSDCG 124
           L+ S+S+G+ LN TRA+ +P TC I      CG
Sbjct: 96  LQSSQSMGMALNNTRALAVPKTCKIPIAAPHCG 128

[Close]
BLAST of Cp4.1LG01g20180 vs. NCBI nr
Match: gi|1021033004|gb|KZM90788.1| (hypothetical protein DCAR_021847 [Daucus carota subsp. sativus])

HSP 1 Score: 92.0 bits (227), Expect = 8.1e-16
Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 1 

Query: 29  IASAASPLSPRPSAVDCPAVVYAILPCVNYITIGSTMTMPSEVCCKNVESVMKWNAKCMC 88
           ++ A+   +P P AVDC  VV  ++ C++++T GST++ P   CC  ++SV+K NA+C+C
Sbjct: 19  VSRASHHAAPTP-AVDCSTVVLNMVDCLSFVTSGSTVSKPEGSCCSGLKSVLKSNAECLC 78

Query: 89  VGLKQSESLGIQLNVTRAIDLPATCGISTPLSDCG 124
              K S   G+ LNVT+A+ LPA C ISTP+++CG
Sbjct: 79  EAFKNSAQFGVSLNVTKAMTLPAVCKISTPVNNCG 112

[Close]
BLAST of Cp4.1LG01g20180 vs. NCBI nr
Match: gi|923577195|ref|XP_013739167.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Brassica napus])

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-15
Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 1 

Query: 11  LALFLTCIAAIWICNENIIASAASPLS---PRPSAVDCPAVVYAILPCVNYITIGSTMTM 70
           L L     A I   N++  A + SP++   P PS  DC +V+Y ++ C++YIT GS  T+
Sbjct: 10  LVLLSPLFAPIHARNKSHSAMSPSPVATPAPGPSNSDCSSVIYGMMDCLSYITPGSNDTI 69

Query: 71  PSEVCCKNVESVMKWNAKCMCVGLKQSESLGIQLNVTRAIDLPATCGISTPLSDCG 124
           P++VCC  + SV+++N KC+CVGL  S+ +GI++N TRA  +P TC +      CG
Sbjct: 70  PTKVCCGGILSVLQYNPKCVCVGLASSKDMGIEINSTRAHSMPTTCKLPIAAPHCG 125

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g20180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NLTL5_ARATH1.9e-1235.79Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia... [more]
NLTL2_ARATH4.6e-1134.52Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia... [more]
NLTL1_ORYSJ5.2e-0734.19Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LT... [more]
LTPG2_ARATH4.4e-0630.34Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT... [more]
BLAST of Cp4.1LG01g20180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KN80_CUCSA2.0e-2152.85Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1[more]
V4L8N2_EUTSA3.0e-1746.24Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10028961mg PE=3 SV=1[more]
A0A164VSI5_DAUCA5.6e-1644.21Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021847 PE=4 SV=1[more]
A0A0B0MRV4_GOSAR1.6e-1538.98Uncharacterized protein OS=Gossypium arboreum GN=F383_20828 PE=3 SV=1[more]
G7INT6_MEDTR1.6e-1542.11Lipid transfer protein OS=Medicago truncatula GN=MTR_2g008580 PE=3 SV=2[more]
BLAST of Cp4.1LG01g20180 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G08670.15.9e-1738.95 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G64080.11.0e-1335.79 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT1G36150.12.3e-1335.00 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT2G13820.12.6e-1234.52 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
AT5G09370.12.2e-1135.16 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi... [more]
BLAST of Cp4.1LG01g20180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121055|ref|XP_008460480.1|5.8e-2250.81PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo][more]
gi|778702474|ref|XP_011655206.1|2.9e-2152.85PREDICTED: extensin [Cucumis sativus][more]
gi|567164219|ref|XP_006397274.1|4.3e-1746.24hypothetical protein EUTSA_v10028961mg [Eutrema salsugineum][more]
gi|1021033004|gb|KZM90788.1|8.1e-1644.21hypothetical protein DCAR_021847 [Daucus carota subsp. sativus][more]
gi|923577195|ref|XP_013739167.1|1.1e-1540.52PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Brassica ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Vocabulary: Biological Process
TermDefinition
GO:0006869lipid transport
Vocabulary: INTERPRO
TermDefinition
IPR016140Bifunc_inhib/LTP/seed_store
IPR000528Plant_LTP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006869 lipid transport
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0031225 anchored component of membrane
molecular_function GO:0008289 lipid binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g20180.1Cp4.1LG01g20180.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000528Plant lipid transfer protein/Par allergenPRINTSPR00382LIPIDTRNSFERcoord: 100..117
score: 2.2E-7coord: 67..81
score: 2.2E-7coord: 44..60
score: 2.
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainPFAMPF14368LTP_2coord: 32..122
score: 2.7
IPR016140Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domainunknownSSF47699Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumincoord: 42..120
score: 2.88
NoneNo IPR availableGENE3DG3DSA:1.10.110.10coord: 43..120
score: 1.7
NoneNo IPR availablePANTHERPTHR33044FAMILY NOT NAMEDcoord: 1..123
score: 1.9
NoneNo IPR availablePANTHERPTHR33044:SF27BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATEDcoord: 1..123
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g20180CmaCh15G007210Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g20180CmoCh15G007410Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g20180CmoCh04G024220Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g20180Cla002146Watermelon (97103) v1cpewmB402
Cp4.1LG01g20180Csa5G396010Cucumber (Chinese Long) v2cpecuB441
Cp4.1LG01g20180MELO3C022792Melon (DHL92) v3.5.1cpemeB360
Cp4.1LG01g20180ClCG03G009020Watermelon (Charleston Gray)cpewcgB379
Cp4.1LG01g20180CSPI05G14500Wild cucumber (PI 183967)cpecpiB441
Cp4.1LG01g20180Lsi09G009670Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g20180MELO3C022792.2Melon (DHL92) v3.6.1cpemedB420
Cp4.1LG01g20180CsaV3_5G023600Cucumber (Chinese Long) v3cpecucB0545
Cp4.1LG01g20180Bhi12G001109Wax gourdcpewgoB0490
Cp4.1LG01g20180CsGy5G014460Cucumber (Gy14) v2cgybcpeB650
Cp4.1LG01g20180Carg01487Silver-seed gourdcarcpeB1158
Cp4.1LG01g20180Carg18246Silver-seed gourdcarcpeB0747
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g20180Cp4.1LG13g05000Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g20180Silver-seed gourdcarcpeB0941
Cp4.1LG01g20180Cucumber (Chinese Long) v3cpecucB0505
Cp4.1LG01g20180Wax gourdcpewgoB0578
Cp4.1LG01g20180Cucurbita pepo (Zucchini)cpecpeB389
Cp4.1LG01g20180Cucumber (Gy14) v1cgycpeB0018
Cp4.1LG01g20180Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g20180Watermelon (97103) v1cpewmB399
Cp4.1LG01g20180Cucumber (Gy14) v2cgybcpeB511