CmoCh15G007410 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G007410
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	Cmo_Chr15 : 3639614 .. 3640397 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCGGTTGCGGGTGCGACCTCGCCATCGCCGGCTCCGAGTGCGACGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCACGAAATCGAATGCCTCTACGGATTGCTGCAAAGTGGTGAAAGATGTGATGAAATCGAAAGCCGATTGTATGTGCGATGCGTTGAAGCAGAACGGCAGAATGGGGATTCAATTGAATCGAACCAGAGCCCTCGGCCTTCCTGCTACCTGCGGAAGCCCTACTTCCCTTGCCGATTGCACCAGTGCGTTTTGTTCTTGTTTTGAAATGGATCGTAATTTTTTATTTTCTGATTTTGGGGATTTTTTGTTTTTTTTTGTTTTTTTTTTTTTTCTTTTTGGCAGTTGCTGTTTCTCCGGTTATGGCACCTCCTCCAGTTCCGAGTGCTAAAGCGCCGAAGCCAGCGAAAAGAGCGAAAGTGCCATCAGCAGTCCCATGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATGCTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACAAGAATTGGCGCCAAGCAGAGTCCCAGTGGAGGCTCCAGCACCGTCAGACGACGACATGGGACCGTCTAGTGAGGACTCGTCGGCATCGGCTACATCTTTCACCACTTGCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTCGGAGCTTTGTGA

mRNA sequence

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCGGTTGCGGGTGCGACCTCGCCATCGCCGGCTCCGAGTGCGACGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCACGAAATCGAATGCCTCTACGGATTGCTGCAAAGTGGTGAAAGATGTGATGAAATCGAAAGCCGATTGTATGTGCGATGCGTTGAAGCAGAACGGCAGAATGGGGATTCAATTGAATCGAACCAGAGCCCTCGGCCTTCCTGCTACCTGCGGAAGCCCTACTTCCCTTGCCGATTGCACCATTGCTGTTTCTCCGGTTATGGCACCTCCTCCAGTTCCGAGTGCTAAAGCGCCGAAGCCAGCGAAAAGAGCGAAAGTGCCATCAGCAGTCCCATGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATGCTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACAAGAATTGGCGCCAAGCAGAGTCCCAGTGGAGGCTCCAGCACCGTCAGACGACGACATGGGACCGTCTAGTGAGGACTCGTCGGCATCGGCTACATCTTTCACCACTTGCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTCGGAGCTTTGTGA

Coding sequence (CDS)

ATGGCAATGTCGATCATTCCGAGTTTGGCTCTGTTCACGATCTGCATTGCAGCGGTTGCGGTTGCGGGTGCGACCTCGCCATCGCCGGCTCCGAGTGCGACGGATTGCTCGGCAGTGGTGTACCAGATGATGCCGTGCGTGGAATACTTCACGATTGGGAGCACGAAATCGAATGCCTCTACGGATTGCTGCAAAGTGGTGAAAGATGTGATGAAATCGAAAGCCGATTGTATGTGCGATGCGTTGAAGCAGAACGGCAGAATGGGGATTCAATTGAATCGAACCAGAGCCCTCGGCCTTCCTGCTACCTGCGGAAGCCCTACTTCCCTTGCCGATTGCACCATTGCTGTTTCTCCGGTTATGGCACCTCCTCCAGTTCCGAGTGCTAAAGCGCCGAAGCCAGCGAAAAGAGCGAAAGTGCCATCAGCAGTCCCATGCACCAAACCGCCAAAGCCGGCTCCAAATTCAACATCCCCAACGCATGCTCCAGTTAGCCCACCAAGTCCACCAGCACCACCACAAGAATTGGCGCCAAGCAGAGTCCCAGTGGAGGCTCCAGCACCGTCAGACGACGACATGGGACCGTCTAGTGAGGACTCGTCGGCATCGGCTACATCTTTCACCACTTGCTCTAGCCTAATCGTGCTGCCTCTCGCCCTTCTGGCTTCATTCGGAGCTTTGTGA

Homology

[Close]

BLAST of CmoCh15G007410 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-11
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 1


Query: 7   PSLALFTICIAAVAVAGAT---SPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDC 66
           P   +  + +++V+V GA+   + +PAPS  DCS ++  M  C+ + + G T +     C
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPSV-DCSTLILNMADCLSFVSSGGTVAKPEGTC 71

Query: 67  CKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTIAVSPVMA 126
           C  +K V+K+ + C+C+A K +  +G+ LN T+A  LPA C     S+A C ++V+P  A
Sbjct: 72  CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTA 131

Query: 127 PPPVPSAKAPKP 135
           P   P   A  P
Sbjct: 132 PGLAPGVAAAGP 142

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BLAST of CmoCh15G007410 vs. TrEMBL
Match: A0A0A0KN80_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 106/222 (47.75%), Postives = 138/222 (62.16%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNAS 60
           M M +I +L LF  CI A+A AG  SPSP  +A DCS VV+QM+PCV+Y TIGSTK+NAS
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAG--SPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CC+V+K+ ++ + DCMCD LKQ+ +MGI LN +RA+ LPA CG  TSL DC IA++  
Sbjct: 61  LVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQG 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAP-------- 180
           MAP P+PS KAP  A  AK P+  P T+ P PAP + +PT APV     PAP        
Sbjct: 121 MAPAPIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPFTRTPTPA 180

Query: 181 PQELAPSRVPV---EAPAPSDDDMGPSSEDSSASATSFTTCS 212
           P    P+  P+     PAP++    P+  + + S T  T  S
Sbjct: 181 PLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVAS 220

[Close]

BLAST of CmoCh15G007410 vs. TrEMBL
Match: A0A165ZEY5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008708 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 7.7e-13
Identity = 55/138 (39.86%), Postives = 70/138 (50.72%), Query Frame = 1


Query: 26  SPSPAP----SATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKADCMCDA 85
           SP+PAP    S +DC A+VYQMM C  Y   G  ++     CC   K +MK    C+C A
Sbjct: 38  SPTPAPHSGNSGSDCGAMVYQMMDCAPYLANGGKQTKPEPMCCSGFKKIMKKNETCLCAA 97

Query: 86  LKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAPPPVPSAKAPKPAKRAKVP 145
           LK    +GI LN TRA  LP+ CG  + L  C I       P P P+   P P    + P
Sbjct: 98  LKSTAGLGISLNVTRAKNLPSACGVSSKLPKCQIPDDSHHQPSPAPA--NPTPKHHIQAP 157

Query: 146 SAVPCTKPPKPAPNSTSP 160
           S    +K PKPAP + +P
Sbjct: 158 SK---SKSPKPAPEAPAP 170

[Close]

BLAST of CmoCh15G007410 vs. TrEMBL
Match: A0A164VSI5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021847 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.0e-12
Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 1


Query: 11  LFTICIAAVAVAGATSPSPAPS-ATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKD 70
           L+T+ I  VA     S   AP+ A DCS VV  M+ C+ + T GST S     CC  +K 
Sbjct: 8   LWTLLILGVAHVSRASHHAAPTPAVDCSTVVLNMVDCLSFVTSGSTVSKPEGSCCSGLKS 67

Query: 71  VMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADC 114
           V+KS A+C+C+A K + + G+ LN T+A+ LPA C   T + +C
Sbjct: 68  VLKSNAECLCEAFKNSAQFGVSLNVTKAMTLPAVCKISTPVNNC 111

[Close]

BLAST of CmoCh15G007410 vs. TrEMBL
Match: A0A022PSN0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014671mg PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-11
Identity = 54/146 (36.99%), Postives = 79/146 (54.11%), Query Frame = 1


Query: 11  LFTICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDV 70
           LF I  A +A A + + S      DCS++V +M  C+ Y T G T +  +  CC  +K V
Sbjct: 9   LFCILFALLAAAISAAHSAPTPGVDCSSLVLEMADCLPYVTEGGTAAKPNGQCCSGLKTV 68

Query: 71  MKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTI------AVSPVMAP 130
           +K+ ADC+C+A K + ++G+ LN T+AL LP  C  S  S+++C +      A SP+ A 
Sbjct: 69  LKTDADCLCEAFKNSAQLGVTLNLTKALALPTACHVSAPSVSNCALSGGAAPAFSPLAAV 128

Query: 131 PPVPSAKAPKPAKRAKVPSAVPCTKP 150
            P P+A A  PA    V  A P   P
Sbjct: 129 SPSPAAVA--PAAGGGVNEAAPAPSP 152

[Close]

BLAST of CmoCh15G007410 vs. TrEMBL
Match: A0A087G2A3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AAs67745U000400 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.9e-11
Identity = 69/201 (34.33%), Postives = 101/201 (50.25%), Query Frame = 1


Query: 22  AGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKADCMCDA 81
           A   SP+PAPS +DCS+V+Y MM C+ +   GS  S+ +  CC  +K V+     C+C A
Sbjct: 26  APTISPTPAPSHSDCSSVIYGMMDCLSFLLKGSNDSSPTKTCCDGIKTVLDYNPQCLCYA 85

Query: 82  LKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAPPPVPSAKAPKPAKRAKVP 141
           +K +  MG  L+ T+A  +P+TC        C +A +P+ +P   PSA+ P P+      
Sbjct: 86  IKSSEAMGFTLDNTKAFAMPSTCNVNVD-PHCEVA-TPIASPS--PSAEPPSPSP----- 145

Query: 142 SAVPCTKPPKPA-PNSTSPTHAPVSPPSPPAPPQELAPSRVPVEAPAPSDDDMGPSSEDS 201
              P  KPP P+ P    PT +P SP   P+ P    P      +PAPS     PS   S
Sbjct: 146 ---PTKKPPSPSPPPKKPPTISPSSPTVTPSLPHVTKPPMPTTSSPAPS-----PSKSSS 205

Query: 202 SASATSFTTCSSLIVLPLALL 222
              + S    +++IV   AL+
Sbjct: 206 GNLSASKLFLAAIIVSSFALV 209

[Close]

BLAST of CmoCh15G007410 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12
Identity = 44/132 (33.33%), Postives = 73/132 (55.30%), Query Frame = 1


Query: 7   PSLALFTICIAAVAVAGAT---SPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDC 66
           P   +  + +++V+V GA+   + +PAPS  DCS ++  M  C+ + + G T +     C
Sbjct: 12  PLFLIVLLSLSSVSVLGASHHHATAPAPSV-DCSTLILNMADCLSFVSSGGTVAKPEGTC 71

Query: 67  CKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTIAVSPVMA 126
           C  +K V+K+ + C+C+A K +  +G+ LN T+A  LPA C     S+A C ++V+P  A
Sbjct: 72  CSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTA 131

Query: 127 PPPVPSAKAPKP 135
           P   P   A  P
Sbjct: 132 PGLAPGVAAAGP 142

[Close]

BLAST of CmoCh15G007410 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 68.6 bits (166), Expect = 5.8e-12
Identity = 52/152 (34.21%), Postives = 74/152 (48.68%), Query Frame = 1


Query: 26  SPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKADCMCDALKQN 85
           +P+P PS++DCS V+Y MM C+ Y  +GS ++     CC  ++ V++    C+C  L   
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 86  GRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAP---PPVPSAKAPKPAKRAKVPS 145
           G MGI+LN TRAL  P  C    +   C I  S    P   P  PSA AP  +  A    
Sbjct: 98  GEMGIELNSTRALATPKACKLSIAPPHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSP 157

Query: 146 AVPCTKPPK---PAPNSTSPTHAPVSPPSPPA 172
               T P     P+  + SP+ +  +  S PA
Sbjct: 158 ETSATSPSSDETPSMTAPSPSSSGTNILSVPA 189

[Close]

BLAST of CmoCh15G007410 vs. TAIR10
Match: AT1G36150.1 (AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.4e-11
Identity = 63/192 (32.81%), Postives = 94/192 (48.96%), Query Frame = 1


Query: 26  SPSPAPS-ATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKADCMCDALKQ 85
           +P+P PS +TDCS+V+Y M+ C+ + T+GST  + +  CC  VK V+     C+C AL+ 
Sbjct: 34  APTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALES 93

Query: 86  NGRMGIQLNRTRALGLPATCGSPTSLADC---TIAVSPVMAPPPVPSAKAPKPAKRAKVP 145
           +  MG  L+ T+AL +P  C  P    +C   T A S  ++PP      +P  AK   + 
Sbjct: 94  SREMGFVLDDTKALAMPKICNVPID-PNCDVSTPAASTPVSPPVESPTTSPSSAKSPAIT 153

Query: 146 SAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPQELAPSRVPVEAPAPSDDDMGP-SSEDS 205
            + P      P    +SP   PVS  SPP     ++ S  P    +P+     P  +  S
Sbjct: 154 PSSPAVSHSPPPVRHSSP---PVSHSSPP-----VSHSSPPTSRSSPAVSHSSPVVAASS 213

Query: 206 SASATSFTTCSS 213
              A S +T SS
Sbjct: 214 PVKAVSSSTASS 216

[Close]

BLAST of CmoCh15G007410 vs. TAIR10
Match: AT2G48130.1 (AT2G48130.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-08
Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = 1


Query: 21  VAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKADCMCD 80
           VA   S + A  ++ C + +  + PC+ Y T  ST    S  CC  +  V+KS   C+C 
Sbjct: 15  VAALWSVTKAQPSSSCVSTLTTLSPCLSYITGNST--TPSQPCCSRLDSVIKSSPQCICS 74

Query: 81  ALKQN-GRMGIQLNRTRALGLPATCGSPT-SLADCTIAVSPVMAPP-PVPSAKAP 133
           A+      +G+ +NRT+AL LP  C   T  L  C  A  P   PP P P+ K P
Sbjct: 75  AVNSPIPNIGLNINRTQALQLPNACNIQTPPLTQCNAATGPTAQPPAPSPTEKTP 127

[Close]

BLAST of CmoCh15G007410 vs. NCBI nr
Match: gi|778702474|ref|XP_011655206.1| (PREDICTED: extensin [Cucumis sativus])

HSP 1 Score: 161.4 bits (407), Expect = 1.9e-36
Identity = 106/222 (47.75%), Postives = 138/222 (62.16%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNAS 60
           M M +I +L LF  CI A+A AG  SPSP  +A DCS VV+QM+PCV+Y TIGSTK+NAS
Sbjct: 1   MTMGMISTLGLFLTCIVAIASAG--SPSPGSNAGDCSEVVFQMLPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CC+V+K+ ++ + DCMCD LKQ+ +MGI LN +RA+ LPA CG  TSL DC IA++  
Sbjct: 61  LVCCEVLKNALEPRPDCMCDVLKQSDKMGIHLNNSRAIALPAACGISTSLPDCDIALTQG 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAP-------- 180
           MAP P+PS KAP  A  AK P+  P T+ P PAP + +PT APV     PAP        
Sbjct: 121 MAPAPIPSTKAPTLAPLAKTPTLAPLTRTPTPAPLTRTPTPAPVIKTPTPAPFTRTPTPA 180

Query: 181 PQELAPSRVPV---EAPAPSDDDMGPSSEDSSASATSFTTCS 212
           P    P+  P+     PAP++    P+  + + S T  T  S
Sbjct: 181 PLTKTPTPAPLTNSPTPAPNNQAPSPARNNQAPSPTPTTVAS 220

[Close]

BLAST of CmoCh15G007410 vs. NCBI nr
Match: gi|659121055|ref|XP_008460480.1| (PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 119/279 (42.65%), Postives = 151/279 (54.12%), Query Frame = 1


Query: 1   MAMSIIPSLALFTICIAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNAS 60
           M M +I +L+LF  CI A+A A   SPSP P A DCS +V+ ++PCV+Y TIGSTK+NAS
Sbjct: 1   MTMGMISNLSLFLTCIVAIASANPPSPSPGPGAGDCSVLVFHILPCVDYLTIGSTKANAS 60

Query: 61  TDCCKVVKDVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPV 120
             CC+V+K+ M+  A+CMCD LKQ+ +MGI LN TR +GLPA CG P SL +C IA+ P 
Sbjct: 61  QVCCEVLKNTMEPSAECMCDQLKQSDKMGIHLNITRVVGLPAACGIPISLPECDIALPPA 120

Query: 121 MAPPPVPSAKAPKPAKRAKVPSAVPCTKPPKPAPNSTSPTHAPVSPPSPPAPPQELAPSR 180
               PVPS KAP PA   K P+  P T  P PAPN  +P+ AP +  +P   P + APS 
Sbjct: 121 ----PVPSTKAPTPAPVTKTPTPAPITNSPTPAPNKQAPSLAP-NKQAPSLAPNKQAPSP 180

Query: 181 VP----------VEAPAPSDDDMGPS---------------------------------- 228
           +P           +AP+P+ +   PS                                  
Sbjct: 181 IPNKQAPSPTPNKQAPSPTSNKQAPSPAPTTVVPAPTPVNHPIVSPPAPEVPPSSDLTPS 240

[Close]

BLAST of CmoCh15G007410 vs. NCBI nr
Match: gi|672178385|ref|XP_008809325.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Phoenix dactylifera])

HSP 1 Score: 84.0 bits (206), Expect = 3.8e-13
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 16  IAAVAVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKA 75
           +A +A++ A S SP PS+ +C +VV  MM C+ Y ++GS +S    +CC+ V  V+ +  
Sbjct: 11  LATLALSAAASSSPPPSSVNCDSVVMDMMDCISYVSMGSKQSRPDEECCRGVSSVVNTSP 70

Query: 76  DCMCDALKQNGRMGIQLNRTRALGLPATCGSPTSLADCTI 116
            C+C AL++   MG+ L+  RA GLPA C    S+ DC +
Sbjct: 71  TCLCAALQEAMNMGVDLDMKRAAGLPAACSIKVSVGDCGV 110

[Close]

BLAST of CmoCh15G007410 vs. NCBI nr
Match: gi|1021042173|gb|KZM99953.1| (hypothetical protein DCAR_008708 [Daucus carota subsp. sativus])

HSP 1 Score: 82.4 bits (202), Expect = 1.1e-12
Identity = 55/138 (39.86%), Postives = 70/138 (50.72%), Query Frame = 1


Query: 26  SPSPAP----SATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVKDVMKSKADCMCDA 85
           SP+PAP    S +DC A+VYQMM C  Y   G  ++     CC   K +MK    C+C A
Sbjct: 38  SPTPAPHSGNSGSDCGAMVYQMMDCAPYLANGGKQTKPEPMCCSGFKKIMKKNETCLCAA 97

Query: 86  LKQNGRMGIQLNRTRALGLPATCGSPTSLADCTIAVSPVMAPPPVPSAKAPKPAKRAKVP 145
           LK    +GI LN TRA  LP+ CG  + L  C I       P P P+   P P    + P
Sbjct: 98  LKSTAGLGISLNVTRAKNLPSACGVSSKLPKCQIPDDSHHQPSPAPA--NPTPKHHIQAP 157

Query: 146 SAVPCTKPPKPAPNSTSP 160
           S    +K PKPAP + +P
Sbjct: 158 SK---SKSPKPAPEAPAP 170

[Close]

BLAST of CmoCh15G007410 vs. NCBI nr
Match: gi|720042289|ref|XP_010269190.1| (PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Nelumbo nucifera])

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 82/226 (36.28%), Postives = 113/226 (50.00%), Query Frame = 1


Query: 12  FTICIAAV---AVAGATSPSPAPSATDCSAVVYQMMPCVEYFTIGSTKSNASTDCCKVVK 71
           F +CI A+   A+      SP PS  DCS V   M  C+ Y + GST S     CC  +K
Sbjct: 7   FVVCILAISIIAIGFVDCASPTPSV-DCSTVFLNMADCLSYVSSGSTVSKPQGACCNGLK 66

Query: 72  DVMKSKADCMCDALKQNGRMGIQLNRTRALGLPATCG-SPTSLADCTIAVSPVMAPPPVP 131
            V+ +K +C+C A   + + G  LN+T+A GLPA CG S  +  +C ++ S   + PP P
Sbjct: 67  TVLNTKPECLCQAFSNSAQFGFTLNQTKAAGLPAACGVSAPAATNCGLSGS-APSSPPAP 126

Query: 132 SAKAPKPAKRA---KVPSAVPCTKPPKP---APNSTSPTHAPVSPPSPPAPPQE-----L 191
           S K P P  ++     PS  P  K P     AP  + P  AP +P SPP P  E      
Sbjct: 127 SPKTPSPPPKSPTTPAPSPPPVAKAPASNVGAPPQSGP--APSAPVSPPVPSPESYTTAK 186

Query: 192 APSRVPV---EAPAPSDDDMGPSSEDSSASATSFTTCSSLIVLPLA 220
           +P+  PV   E+PAP      PSS  SSA A+  +T  S +  P++
Sbjct: 187 SPAPAPVSVSESPAPVPASESPSS--SSAEASVSSTVGSPVPTPVS 226

The following BLAST results are available for this feature:

BLAST of CmoCh15G007410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTL5_ARATH	4.6e-11	33.33	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia...	[more]

BLAST of CmoCh15G007410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KN80_CUCSA	1.3e-36	47.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G396010 PE=4 SV=1	[more]
A0A165ZEY5_DAUCA	7.7e-13	39.86	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_008708 PE=4 SV=1	[more]
A0A164VSI5_DAUCA	5.0e-12	41.35	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021847 PE=4 SV=1	[more]
A0A022PSN0_ERYGU	1.9e-11	36.99	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014671mg PE=3 SV=1	[more]
A0A087G2A3_ARAAL	1.9e-11	34.33	Uncharacterized protein OS=Arabis alpina GN=AALP_AAs67745U000400 PE=4 SV=1	[more]

BLAST of CmoCh15G007410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64080.1	2.6e-12	33.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G08670.1	5.8e-12	34.21	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G36150.1	6.4e-11	32.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G48130.1	2.3e-08	34.78	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CmoCh15G007410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778702474\|ref\|XP_011655206.1\|	1.9e-36	47.75	PREDICTED: extensin [Cucumis sativus]	[more]
gi\|659121055\|ref\|XP_008460480.1\|	1.2e-35	42.65	PREDICTED: SH3 domain-containing protein C23A1.17-like [Cucumis melo]	[more]
gi\|672178385\|ref\|XP_008809325.1\|	3.8e-13	39.00	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Phoenix d...	[more]
gi\|1021042173\|gb\|KZM99953.1\|	1.1e-12	39.86	hypothetical protein DCAR_008708 [Daucus carota subsp. sativus]	[more]
gi\|720042289\|ref\|XP_010269190.1\|	2.5e-12	36.28	PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Nelumbo n...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0031225	anchored component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G007410.1	CmoCh15G007410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..113 score: 9.6
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..113 score: 5.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 35..111 score: 1.7
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..110 score: 1.8
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..140 score: 9.3
None	No IPR available	PANTHER	PTHR33044:SF27	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 1..140 score: 9.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G007410	CmaCh15G007210	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G007410	Cla002146	Watermelon (97103) v1	cmowmB253
CmoCh15G007410	Csa5G396010	Cucumber (Chinese Long) v2	cmocuB280
CmoCh15G007410	MELO3C022792	Melon (DHL92) v3.5.1	cmomeB240
CmoCh15G007410	ClCG03G009020	Watermelon (Charleston Gray)	cmowcgB250
CmoCh15G007410	CSPI05G14500	Wild cucumber (PI 183967)	cmocpiB289
CmoCh15G007410	Lsi09G009670	Bottle gourd (USVL1VR-Ls)	cmolsiB256
CmoCh15G007410	Cp4.1LG01g20180	Cucurbita pepo (Zucchini)	cmocpeB280
CmoCh15G007410	Cp4.1LG13g05000	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G007410	MELO3C022792.2	Melon (DHL92) v3.6.1	cmomedB273
CmoCh15G007410	CsaV3_5G023600	Cucumber (Chinese Long) v3	cmocucB0337
CmoCh15G007410	Cla97C03G060200	Watermelon (97103) v2	cmowmbB283
CmoCh15G007410	Bhi12G001109	Wax gourd	cmowgoB0367
CmoCh15G007410	CsGy5G014460	Cucumber (Gy14) v2	cgybcmoB574
CmoCh15G007410	Carg01487	Silver-seed gourd	carcmoB1118
CmoCh15G007410	Carg18246	Silver-seed gourd	carcmoB0714

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G007410	CmoCh04G024220	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G007410	Silver-seed gourd	carcmoB0915
CmoCh15G007410	Cucumber (Chinese Long) v3	cmocucB0333
CmoCh15G007410	Watermelon (97103) v2	cmowmbB280
CmoCh15G007410	Wax gourd	cmowgoB0404
CmoCh15G007410	Cucurbita moschata (Rifu)	cmocmoB245
CmoCh15G007410	Cucumber (Gy14) v1	cgycmoB0018
CmoCh15G007410	Cucurbita maxima (Rimu)	cmacmoB465
CmoCh15G007410	Cucurbita maxima (Rimu)	cmacmoB693
CmoCh15G007410	Wild cucumber (PI 183967)	cmocpiB284
CmoCh15G007410	Cucumber (Chinese Long) v2	cmocuB276
CmoCh15G007410	Melon (DHL92) v3.5.1	cmomeB273
CmoCh15G007410	Watermelon (Charleston Gray)	cmowcgB242
CmoCh15G007410	Watermelon (97103) v1	cmowmB254
CmoCh15G007410	Watermelon (97103) v1	cmowmB279
CmoCh15G007410	Cucurbita pepo (Zucchini)	cmocpeB289
CmoCh15G007410	Bottle gourd (USVL1VR-Ls)	cmolsiB271
CmoCh15G007410	Cucumber (Gy14) v2	cgybcmoB459