Lsi09G007410 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi09G007410
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
Locationchr09 : 8551295 .. 8552296 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCCCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAATTCTGTTTCTGTTCATCCTTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCACAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCATCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCGAGAGCTGAATCTCCAGCGGCGGTAGCTGAGGAAGATCAACGGATTGTTGAGGATTCGGAGCAGGACGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTTTCGAGGCGCTCAAATCGCTCCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGATTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGACGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGAGAGGCTGTGCTTCGGCGATTAGAAGAGGCTTTAAGAATTGCCGAGAATGAAAACAAAGCGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGCGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAAACAGCAATTCGCCAAGTACAGGGAGCTCTCACCAAAGAAATTCGAGGTTGATGGGTATCTACGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

mRNA sequence

ATGAGCCCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAATTCTGTTTCTGTTCATCCTTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCACAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCATCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCGAGAGCTGAATCTCCAGCGGCGGTAGCTGAGGAAGATCAACGGATTGTTGAGGATTCGGAGCAGGACGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTTTCGAGGCGCTCAAATCGCTCCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGATTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGACGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGAGAGGCTGTGCTTCGGCGATTAGAAGAGGCTTTAAGAATTGCCGAGAATGAAAACAAAGCGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGCGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAAACAGCAATTCGCCAAGTACAGGGAGCTCTCACCAAAGAAATTCGAGGTTGATGGGTATCTACGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Coding sequence (CDS)

ATGAGCCCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAATTCTGTTTCTGTTCATCCTTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCACAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCATCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCGAGAGCTGAATCTCCAGCGGCGGTAGCTGAGGAAGATCAACGGATTGTTGAGGATTCGGAGCAGGACGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTTTCGAGGCGCTCAAATCGCTCCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACCGAGTGGAAATTTCTGATGGCTAGATTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGACGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGAGAGGCTGTGCTTCGGCGATTAGAAGAGGCTTTAAGAATTGCCGAGAATGAAAACAAAGCGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGCGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAAACAGCAATTCGCCAAGTACAGGGAGCTCTCACCAAAGAAATTCGAGGTTGATGGGTATCTACGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Protein sequence

MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Homology
[Close]
BLAST of Lsi09G007410 vs. Swiss-Prot
Match: SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 6.2e-97
Identity = 204/325 (62.77%), Postives = 249/325 (76.62%), Query Frame = 1 

Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPV 67
           M S  S+S S + +F A K+  V+ P   R      R+ +S+   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPLIPR------RDLLSI---RIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLND 127
            +  +++A++AILIGAA +M GKFS LP +AESP    E+    V+  E+   + +PL++
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVK--EEKLSEITPLSE 120

Query: 128 FLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTE 187
            L+S  EA E L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLGEMG+ E
Sbjct: 121 LLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPE 180

Query: 188 NARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVR 247
           NAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   KEARDVR
Sbjct: 181 NARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVR 240

Query: 248 LIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYREL 307
           LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEAK+QFAKYREL
Sbjct: 241 LIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYREL 300

Query: 308 SPKKFEVDGYLRTPLSRMKIFGSDE 333
           SPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 SPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of Lsi09G007410 vs. Swiss-Prot
Match: Y263_METJA (TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0263 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.1e-06
Identity = 42/157 (26.75%), Postives = 75/157 (47.77%), Query Frame = 1 

Query: 147 LENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEA 206
           +E GE E+AL+ L + +   P++T      A +L  +GK + A D   +IL++      A
Sbjct: 125 IEFGEFEKALEALDEFLKIYPNLTSILRQKASILEILGKLDEALDCVNKILSIKKDDAHA 184

Query: 207 LFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKS 266
            +    ++ + G  +  L  L+ A+ +  NEN     +D+    A ++    N EEAL  
Sbjct: 185 WYLKGRILKKLGNIKEALDALKMAINL--NENLVHVYKDI----AYLELANNNYEEALNY 244

Query: 267 YKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAK 304
             +  ++ PND    F   +IY  L+K  +A + + K
Sbjct: 245 ITKYLEKFPNDVEAKFYLALIYENLNKVDDALKIYDK 275

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BLAST of Lsi09G007410 vs. TrEMBL
Match: A0A0A0KMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 2.1e-144
Identity = 279/316 (88.29%), Postives = 292/316 (92.41%), Query Frame = 1 

Query: 30  VSLPKNLRFAAPLSRNSVSVHPFRVRASSVPV---HSNHPVVQCLRNYARAAILIGAAAT 89
           VS   NLRFAAPLSR+SVSVHPFRVRASSVPV    ++HPVV CLRNYA+AAILIGAAAT
Sbjct: 2   VSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAAT 61

Query: 90  MVGKFSHLPARAESPAAVAEE---------DQRIVEDSEQDGKQSSPLNDFLESNSEAFE 149
           MVGKFS+LPARAES A VAEE         D RI EDS+QDG+QSSPLNDFLESNSEA E
Sbjct: 62  MVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVE 121

Query: 150 ALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEIL 209
           ALKSLLQQKLENGEDEEALKILKQLVSA PSVTEWKFLMARLLGEMGKTE+AR+VFEEIL
Sbjct: 122 ALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEIL 181

Query: 210 AVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQ 269
           AVNPLSFEALFENALLMDRCGEGEAV+RRLEEALRIAENENKAKEARDV+LIMAQIQFLQ
Sbjct: 182 AVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQ 241

Query: 270 KNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGY 329
           KNVEEALKSYKEL KEDP+DFRPYFCQGMIYSLLDKN+EAKQQFAKYRELSPKKFEVDGY
Sbjct: 242 KNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGY 301

Query: 330 LRTPLSRMKIFGSDEN 334
           LRTPLSRMKIFGSDEN
Sbjct: 302 LRTPLSRMKIFGSDEN 317

[Close]
BLAST of Lsi09G007410 vs. TrEMBL
Match: A0A061E9A2_THECC (Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_011097 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 2.1e-107
Identity = 225/348 (64.66%), Postives = 267/348 (76.72%), Query Frame = 1 

Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSV- 60
           M+PT A +S+PS S L        S S S S    L F AP         PFR+RASS  
Sbjct: 1   MNPTLAKLSAPSPSFLHL-----KSLSSSTSSASFLAFPAP--------KPFRLRASSAK 60

Query: 61  --------PVHSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRI 120
                   P     P+ Q L+ +A+ AIL+GA A M+GKFSH PA+AESP  + E++   
Sbjct: 61  SDSFPSSNPNKHTQPLTQKLQCFAKTAILLGATALMIGKFSHFPAKAESPPTMTEQETSG 120

Query: 121 VEDSEQ------DGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSA 180
           +E+ EQ      + +Q+SPL++FL SN+EA EALK LL+QKLENGEDEEAL IL +LVSA
Sbjct: 121 LEEGEQQEEDAQNPEQTSPLSEFLGSNNEAIEALKYLLEQKLENGEDEEALTILNRLVSA 180

Query: 181 QPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLR 240
           QP VT+WKFL+ARLL EMG+TENAR VFEEIL  NPLSFEALFENALLMDRCGEGEAV++
Sbjct: 181 QPQVTDWKFLLARLLSEMGQTENARKVFEEILRTNPLSFEALFENALLMDRCGEGEAVIK 240

Query: 241 RLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQG 300
           RLEEAL IA++E K KEARDVRLIMAQIQFLQKNVEEAL+SY++LAKEDP+DFRPYFCQG
Sbjct: 241 RLEEALTIAQDEKKVKEARDVRLIMAQIQFLQKNVEEALRSYQQLAKEDPSDFRPYFCQG 300

Query: 301 MIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           MIYSLLD+N EAK+QFAKYRELSPKKFEV+GYLRT LSRMK+FG++E+
Sbjct: 301 MIYSLLDRNAEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGTNES 335

[Close]
BLAST of Lsi09G007410 vs. TrEMBL
Match: B9HJP0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14270g PE=4 SV=2)

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-102
Identity = 210/326 (64.42%), Postives = 254/326 (77.91%), Query Frame = 1 

Query: 13  SSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNH----PVV 72
           +S+L++ F  +     S + P  L        NS S    ++  ++    SNH    P+ 
Sbjct: 2   NSTLAASF-IHLKTPSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHTSKSPLT 61

Query: 73  QCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQ--SSPLN 132
           Q L+   + AILIG AA++ GKF  LPA+AE+PAA+ E++  + E+ E++ +   S+PL 
Sbjct: 62  QKLKTLTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEEEEEEENQSDPSTPLQ 121

Query: 133 DFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKT 192
            FLESN+EA E+LKSLLQQKLENG+DEEALKI+K LVSAQP VTEWKFLMARLL E G+ 
Sbjct: 122 AFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKFLMARLLNETGRA 181

Query: 193 ENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDV 252
           ++AR+VFEEIL  NPLSFEALFENALLMDRCGEGEAV+RRL+ AL IAE ENK KEARDV
Sbjct: 182 QDARNVFEEILVANPLSFEALFENALLMDRCGEGEAVIRRLQGALDIAEEENKVKEARDV 241

Query: 253 RLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRE 312
           RLIMAQI FLQKNVEEALKSY+EL+KEDP DFRPYFC+GMIYSLLD+N EAK+QFAKYRE
Sbjct: 242 RLIMAQIHFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDRNEEAKEQFAKYRE 301

Query: 313 LSPKKFEVDGYLRTPLSRMKIFGSDE 333
           LSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 302 LSPKKFEVEGYLRTSLSRMKLFGSNE 326

[Close]
BLAST of Lsi09G007410 vs. TrEMBL
Match: B9HVN0_POPTR (Tetratricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0010s10880g PE=4 SV=2)

HSP 1 Score: 378.3 bits (970), Expect = 1.0e-101
Identity = 210/320 (65.62%), Postives = 247/320 (77.19%), Query Frame = 1 

Query: 29  SVSLPKNLRFAAPLSRNSVSVHPFRV----RASSVPVHSN----HPVVQCLRNYARAAIL 88
           S + P  L F    S NS S  P ++     +SS P  SN    +P+ Q L+   + AIL
Sbjct: 17  SFNSPSLLHFTTLKSHNSTSTPPLKIPKASSSSSSPPSSNDTFKNPLTQTLKTLTKTAIL 76

Query: 89  IGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQ--------SSPLNDFLESN 148
           IG  A+M GKF  LPA+AE+PAA+ E++  + E+ E   K         S+PL  FLESN
Sbjct: 77  IGVTASMAGKFPVLPAKAENPAALTEQNPTLEEEEEGMEKHQNQNQSDASTPLEAFLESN 136

Query: 149 SEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDV 208
           +EA E+LKSLLQQKLE G+D+EAL ILKQLVSAQP VTEWKFLMARLL EM + ++AR+V
Sbjct: 137 AEAIESLKSLLQQKLEKGQDDEALNILKQLVSAQPEVTEWKFLMARLLNEMRRVQDARNV 196

Query: 209 FEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQ 268
           FEEIL VNPLSFEALFENALLM+R GEG+AV+RRL EAL IAE ENK KEARDVRLIMAQ
Sbjct: 197 FEEILVVNPLSFEALFENALLMERSGEGDAVIRRLREALDIAEEENKVKEARDVRLIMAQ 256

Query: 269 IQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKF 328
           IQFLQKNVEEAL+SY+EL+ EDP DFRPYFC+GMIYSLLD+N EAK+QFAKYRELSPKKF
Sbjct: 257 IQFLQKNVEEALESYQELSNEDPKDFRPYFCRGMIYSLLDRNEEAKEQFAKYRELSPKKF 316

Query: 329 EVDGYLRTPLSRMKIFGSDE 333
           EV+GYLRT LSRMK+FGS+E
Sbjct: 317 EVEGYLRTSLSRMKLFGSNE 336

[Close]
BLAST of Lsi09G007410 vs. TrEMBL
Match: V4LCB5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021135mg PE=4 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 1.1e-100
Identity = 213/331 (64.35%), Postives = 260/331 (78.55%), Query Frame = 1 

Query: 5   FASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSN 64
           F+S+S+PSS S S I +F A K+  V+ P N R      R+ +SV   R+RASS    S+
Sbjct: 2   FSSLSAPSSLSSSLISSFVAVKAPPVTGPLNPR------RDLLSV---RIRASSKQNGSD 61

Query: 65  HPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQ--DGKQS 124
           +     L+++A++AILIGAA +M GKFS LP +AESP    EE    V++     D + S
Sbjct: 62  YCFPDKLKSFAKSAILIGAAVSMTGKFSALPVKAESPVTTTEETLSEVKEERNASDIEPS 121

Query: 125 SPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGE 184
           SPL++ L+S  EA + L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLGE
Sbjct: 122 SPLSELLDSTPEAVQTLRSLLQQKLEKGEDEEALKLLERLVTAQPDETEWKFLMARLLGE 181

Query: 185 MGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKE 244
           MG+ ENAR +FEEIL  NPL FEALFENALLMDR GEG+AV++RLE+AL +A+ EN  KE
Sbjct: 182 MGRPENARQMFEEILRRNPLCFEALFENALLMDRSGEGDAVMQRLEDALAVAQAENMVKE 241

Query: 245 ARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFA 304
            RDVRLI+AQIQFLQKNV++ALKSY+EL KEDP DFRPYFC+GMIYSLLDKNVEAK+QFA
Sbjct: 242 MRDVRLIIAQIQFLQKNVDDALKSYEELTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFA 301

Query: 305 KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           KYRELSPKKFEV+GYLRTPLSRMK+FGS E+
Sbjct: 302 KYRELSPKKFEVEGYLRTPLSRMKLFGSGED 323

[Close]
BLAST of Lsi09G007410 vs. TAIR10
Match: AT3G18420.1 (AT3G18420.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 355.5 bits (911), Expect = 3.5e-98
Identity = 204/325 (62.77%), Postives = 249/325 (76.62%), Query Frame = 1 

Query: 8   MSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPV 67
           M S  S+S S + +F A K+  V+ P   R      R+ +S+   R+RASS    S +  
Sbjct: 1   MISSLSASSSLVSSFVAVKATPVTGPLIPR------RDLLSI---RIRASSNQNSSGYCF 60

Query: 68  VQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLND 127
            +  +++A++AILIGAA +M GKFS LP +AESP    E+    V+  E+   + +PL++
Sbjct: 61  PEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVK--EEKLSEITPLSE 120

Query: 128 FLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTE 187
            L+S  EA E L+SLLQQKLE GEDEEALK+L++LV+AQP  TEWKFLMARLLGEMG+ E
Sbjct: 121 LLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPE 180

Query: 188 NARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVR 247
           NAR +FEEIL  NPLSFEALFENALLMDR GEG AVL+RLE+AL +AE E   KEARDVR
Sbjct: 181 NARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVR 240

Query: 248 LIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYREL 307
           LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKNVEAK+QFAKYREL
Sbjct: 241 LIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYREL 300

Query: 308 SPKKFEVDGYLRTPLSRMKIFGSDE 333
           SPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 301 SPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of Lsi09G007410 vs. TAIR10
Match: AT2G37400.1 (AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-33
Identity = 77/210 (36.67%), Postives = 125/210 (59.52%), Query Frame = 1 

Query: 120 KQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARL 179
           ++   L ++L S+ +  EAL+SL++ ++++ +  EA++++ +L+  +P   EW  L A +
Sbjct: 114 EEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANI 173

Query: 180 LGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEG-EAVLRRLEEALRIAENEN 239
               G  E+A+  FEEIL  +PL  EA     +     G+   AV +R+EEA+   + E 
Sbjct: 174 FSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEK 233

Query: 240 KAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAK 299
             K+ RD +L++AQI+ ++    EALK Y+EL KE+P DFRPY CQG+IY++L K  EA+
Sbjct: 234 NRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAE 293

Query: 300 QQFAKYRELSPKKFEVDGYLRTPLSRMKIF 329
           +QF K+R L PK      Y    +   K+F
Sbjct: 294 KQFEKFRRLVPKNHPYREYFMDNMVASKLF 323

[Close]
BLAST of Lsi09G007410 vs. TAIR10
Match: AT4G39470.1 (AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 2.0e-32
Identity = 92/285 (32.28%), Postives = 156/285 (54.74%), Query Frame = 1 

Query: 34  KNLRFAAPLSRNSVSVHPFRVRASSVPVHSNHPVVQCLRNYARAAILIGAAATMVGKFSH 93
           K+  FA  L++      P  +  SS  + S+   VQ L    +AAIL+  +   +G  S 
Sbjct: 42  KSRPFAPRLAQPDNFAPPLPLIRSSTSLLSSKDFVQMLAR--KAAILLVGSFVFLGFCSS 101

Query: 94  LPARAESPAAVAEEDQRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDE 153
            PA A   A V  + +  +ED +   K        LE+  E  EA+K+++ +K+  G++E
Sbjct: 102 KPALALPTATVVSQAE--LEDEKMFEK-------LLENEPENMEAMKAVVYKKMRRGKNE 161

Query: 154 EALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALL 213
           +A+K +++L+  +P   EWK L A     MG+   A+ ++++IL   PL   AL   A++
Sbjct: 162 DAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMV 221

Query: 214 MDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKE 273
           M +  +  +V   L EA+ +A   N+  E R++++++ Q+  ++   EE LK ++++  +
Sbjct: 222 MHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVND 281

Query: 274 DPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYL 319
           +P DFRPY CQG++YSL+DK  EA QQF  Y  L P +F   G+L
Sbjct: 282 NPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFL 314

[Close]
BLAST of Lsi09G007410 vs. TAIR10
Match: AT3G53560.1 (AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 132.1 bits (331), Expect = 6.3e-31
Identity = 99/322 (30.75%), Postives = 169/322 (52.48%), Query Frame = 1 

Query: 20  FNFNASKSKSVSLPKNL-----RFAAPLSRNSVSVHPFRVRASSVPVHSNHPVVQCLRNY 79
           F+ + + + S + PKNL     +  + L   S+     + + S  P+  + P     R +
Sbjct: 14  FHLSFTHTSSSTFPKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTP----FRLF 73

Query: 80  ARAAILIGAAATMVGKFSHLPARAES-----PAAVAEEDQRIVEDSEQDGKQSSPLNDFL 139
               I +  AA ++    HL + A +     P +V  ++   +E+ E+       L++ L
Sbjct: 74  KSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKENVTLEEEER------ALDEHL 133

Query: 140 ESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENA 199
            ++    +AL+SL++ K+++ +  EA++++ +L+  +P   EW  L A +    G  + A
Sbjct: 134 ITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLA 193

Query: 200 RDVFEEILAVNPLSFEALFENALLMDRCGEG---EAVLRRLEEALRIAENENKAKEARDV 259
           +  FEEILA +PL  EA   + LLM     G   + V  R+EEA+   + EN   + RD 
Sbjct: 194 KTGFEEILAKDPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDF 253

Query: 260 RLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRE 319
           +L++AQI+ ++    EALK Y+EL KE+P DFRPY CQG+IY+LL K  +A++QF  +R+
Sbjct: 254 KLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRK 313

Query: 320 LSPKKFEVDGYLRTPLSRMKIF 329
           L PK      Y    +   K+F
Sbjct: 314 LVPKNHPYREYFMDNMIATKLF 323

[Close]
BLAST of Lsi09G007410 vs. TAIR10
Match: AT5G02590.1 (AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-29
Identity = 91/254 (35.83%), Postives = 142/254 (55.91%), Query Frame = 1 

Query: 84  AATMVGKFSHLPARAESPAAVAEEDQRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLL 143
           AAT+V      P    S AA    DQ  +    ++ ++ + L   L  N    EAL+SL+
Sbjct: 84  AATLVS-----PPPPPSTAADLTSDQ--ISSRPKEEEEEAALEKHLTKNPNDVEALQSLM 143

Query: 144 QQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLS 203
           + K +    + AL+IL +L+  QP   EW+ L A++    G  ++A   FEE+L+ +P  
Sbjct: 144 KIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFR 203

Query: 204 FEALFENALLMDRCGEGEAVLRRLE----EALRIAENENKAKEARDVRLIMAQIQFLQKN 263
            EA   + L+M    E E+ L  +E    EA+   + ENK K+ RD  L++AQI+ ++ N
Sbjct: 204 VEAY--HGLVM-AYSESESKLSEIESRINEAIEKCKKENK-KDFRDFMLLIAQIRVIKGN 263

Query: 264 VEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYL- 323
             EAL+ Y+EL K++P DFRPY CQG+IY+L+ K  EA++QFA++R L P+      YL 
Sbjct: 264 PIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFAEFRRLVPENHPYKEYLD 323

Query: 324 RTPLSRMKIFGSDE 333
              L+  K+F  ++
Sbjct: 324 ANVLNTNKLFAKNQ 326

[Close]
BLAST of Lsi09G007410 vs. NCBI nr
Match: gi|659072680|ref|XP_008466719.1| (PREDICTED: uncharacterized protein LOC103504062 [Cucumis melo])

HSP 1 Score: 555.4 bits (1430), Expect = 6.5e-155
Identity = 303/343 (88.34%), Postives = 318/343 (92.71%), Query Frame = 1 

Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFASMSSPSSSSLSSIFNFN S SK VS   NLRFAAPLSR+S+SVHPFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  V-HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------DQR 120
           V  ++HPVVQCLRNYA+AAILIGAAATMVGKFS+LPARAE+PAAVAEE         D+R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSL 300
           LRIAE E KAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           LDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]
BLAST of Lsi09G007410 vs. NCBI nr
Match: gi|449463501|ref|XP_004149472.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 4.2e-154
Identity = 302/345 (87.54%), Postives = 316/345 (91.59%), Query Frame = 1 

Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVP 60
           MS TFAS+SSPSSSS SSIFNFN S SK VS   NLRFAAPLSR+SVSVHPFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  V---HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEE---------D 120
           V    ++HPVV CLRNYA+AAILIGAAATMVGKFS+LPARAES A VAEE         D
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 QRIVEDSEQDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180
            RI EDS+QDG+QSSPLNDFLESNSEA EALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPLSFEALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIY 300
           EALRIAENENKAKEARDV+LIMAQIQFLQKNVEEALKSYKEL KEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           SLLDKN+EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]
BLAST of Lsi09G007410 vs. NCBI nr
Match: gi|700194585|gb|KGN49762.1| (hypothetical protein Csa_5G114590 [Cucumis sativus])

HSP 1 Score: 520.0 bits (1338), Expect = 3.0e-144
Identity = 279/316 (88.29%), Postives = 292/316 (92.41%), Query Frame = 1 

Query: 30  VSLPKNLRFAAPLSRNSVSVHPFRVRASSVPV---HSNHPVVQCLRNYARAAILIGAAAT 89
           VS   NLRFAAPLSR+SVSVHPFRVRASSVPV    ++HPVV CLRNYA+AAILIGAAAT
Sbjct: 2   VSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAAT 61

Query: 90  MVGKFSHLPARAESPAAVAEE---------DQRIVEDSEQDGKQSSPLNDFLESNSEAFE 149
           MVGKFS+LPARAES A VAEE         D RI EDS+QDG+QSSPLNDFLESNSEA E
Sbjct: 62  MVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVE 121

Query: 150 ALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEIL 209
           ALKSLLQQKLENGEDEEALKILKQLVSA PSVTEWKFLMARLLGEMGKTE+AR+VFEEIL
Sbjct: 122 ALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEIL 181

Query: 210 AVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKAKEARDVRLIMAQIQFLQ 269
           AVNPLSFEALFENALLMDRCGEGEAV+RRLEEALRIAENENKAKEARDV+LIMAQIQFLQ
Sbjct: 182 AVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQ 241

Query: 270 KNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVEAKQQFAKYRELSPKKFEVDGY 329
           KNVEEALKSYKEL KEDP+DFRPYFCQGMIYSLLDKN+EAKQQFAKYRELSPKKFEVDGY
Sbjct: 242 KNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGY 301

Query: 330 LRTPLSRMKIFGSDEN 334
           LRTPLSRMKIFGSDEN
Sbjct: 302 LRTPLSRMKIFGSDEN 317

[Close]
BLAST of Lsi09G007410 vs. NCBI nr
Match: gi|590697066|ref|XP_007045336.1| (Prenylyltransferase superfamily protein [Theobroma cacao])

HSP 1 Score: 397.1 bits (1019), Expect = 3.0e-107
Identity = 225/348 (64.66%), Postives = 267/348 (76.72%), Query Frame = 1 

Query: 1   MSPTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSV- 60
           M+PT A +S+PS S L        S S S S    L F AP         PFR+RASS  
Sbjct: 1   MNPTLAKLSAPSPSFLHL-----KSLSSSTSSASFLAFPAP--------KPFRLRASSAK 60

Query: 61  --------PVHSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRI 120
                   P     P+ Q L+ +A+ AIL+GA A M+GKFSH PA+AESP  + E++   
Sbjct: 61  SDSFPSSNPNKHTQPLTQKLQCFAKTAILLGATALMIGKFSHFPAKAESPPTMTEQETSG 120

Query: 121 VEDSEQ------DGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSA 180
           +E+ EQ      + +Q+SPL++FL SN+EA EALK LL+QKLENGEDEEAL IL +LVSA
Sbjct: 121 LEEGEQQEEDAQNPEQTSPLSEFLGSNNEAIEALKYLLEQKLENGEDEEALTILNRLVSA 180

Query: 181 QPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLR 240
           QP VT+WKFL+ARLL EMG+TENAR VFEEIL  NPLSFEALFENALLMDRCGEGEAV++
Sbjct: 181 QPQVTDWKFLLARLLSEMGQTENARKVFEEILRTNPLSFEALFENALLMDRCGEGEAVIK 240

Query: 241 RLEEALRIAENENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQG 300
           RLEEAL IA++E K KEARDVRLIMAQIQFLQKNVEEAL+SY++LAKEDP+DFRPYFCQG
Sbjct: 241 RLEEALTIAQDEKKVKEARDVRLIMAQIQFLQKNVEEALRSYQQLAKEDPSDFRPYFCQG 300

Query: 301 MIYSLLDKNVEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           MIYSLLD+N EAK+QFAKYRELSPKKFEV+GYLRT LSRMK+FG++E+
Sbjct: 301 MIYSLLDRNAEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGTNES 335

[Close]
BLAST of Lsi09G007410 vs. NCBI nr
Match: gi|645228432|ref|XP_008220992.1| (PREDICTED: transmembrane and TPR repeat-containing protein 1 [Prunus mume])

HSP 1 Score: 395.2 bits (1014), Expect = 1.1e-106
Identity = 223/337 (66.17%), Postives = 264/337 (78.34%), Query Frame = 1 

Query: 6   ASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLSRNSVSVHPFRVRASSVPV---- 65
           +S +  SSSS SS+F+F  + SK    P  LRFA P S NS      ++  SS       
Sbjct: 3   SSSTLASSSSSSSLFHFKLTPSKPTQ-PSLLRFAPPHSHNSHHAPALKITVSSTNHNTLL 62

Query: 66  -----HSNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEDQRIVEDSE 125
                H+++P++Q L++YA+AAILIG AAT+  K S L ARAE P A+ E+    V D E
Sbjct: 63  PSNGGHNSNPILQNLKHYAKAAILIGVAATIFTKSSTLLARAEPPPALTEQAPTQVSDDE 122

Query: 126 QDGKQSSPLNDFLESNSEAFEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLM 185
              + SSPL+DFL SNSEA EALKSLLQQKLENGED EALKIL++L  AQPS TEWKF+M
Sbjct: 123 --NQSSSPLSDFLGSNSEAIEALKSLLQQKLENGEDGEALKILQRLALAQPSATEWKFMM 182

Query: 186 ARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAEN 245
           AR+L EMG+ E+AR VFEEILA +PLSFEALFENALLMDR GEGEAV++RLE+AL+IAE 
Sbjct: 183 ARVLAEMGENESARQVFEEILAADPLSFEALFENALLMDRSGEGEAVMKRLEDALQIAEE 242

Query: 246 ENKAKEARDVRLIMAQIQFLQKNVEEALKSYKELAKEDPNDFRPYFCQGMIYSLLDKNVE 305
           ENKAKEARDV+LIMAQIQFLQKNVE+AL SY ELAKEDP DFRPYFC+GMIYSLLD+N E
Sbjct: 243 ENKAKEARDVKLIMAQIQFLQKNVEDALNSYNELAKEDPKDFRPYFCRGMIYSLLDRNAE 302

Query: 306 AKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 334
           A++QF KYR+LSPKKFEVDGYLRTPLSR+K+FG+DEN
Sbjct: 303 AREQFEKYRQLSPKKFEVDGYLRTPLSRVKLFGNDEN 336

The following BLAST results are available for this feature:
BLAST of Lsi09G007410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SG1_ARATH6.2e-9762.77protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1[more]
Y263_METJA5.1e-0626.75TPR repeat-containing protein MJ0263 OS=Methanocaldococcus jannaschii (strain AT... [more]
BLAST of Lsi09G007410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMW6_CUCSA2.1e-14488.29Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114590 PE=4 SV=1[more]
A0A061E9A2_THECC2.1e-10764.66Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_011097 PE=4 SV... [more]
B9HJP0_POPTR1.2e-10264.42Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14270g PE=4 SV=2[more]
B9HVN0_POPTR1.0e-10165.63Tetratricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
V4LCB5_EUTSA1.1e-10064.35Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10021135mg PE=4 SV=1[more]
BLAST of Lsi09G007410 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18420.13.5e-9862.77 Protein prenylyltransferase superfamily protein[more]
AT2G37400.11.8e-3336.67 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G39470.12.0e-3232.28 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53560.16.3e-3130.75 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G02590.11.6e-2935.83 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Lsi09G007410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659072680|ref|XP_008466719.1|6.5e-15588.34PREDICTED: uncharacterized protein LOC103504062 [Cucumis melo][more]
gi|449463501|ref|XP_004149472.1|4.2e-15487.54PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus][more]
gi|700194585|gb|KGN49762.1|3.0e-14488.29hypothetical protein Csa_5G114590 [Cucumis sativus][more]
gi|590697066|ref|XP_007045336.1|3.0e-10764.66Prenylyltransferase superfamily protein [Theobroma cacao][more]
gi|645228432|ref|XP_008220992.1|1.1e-10666.17PREDICTED: transmembrane and TPR repeat-containing protein 1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi09G007410.1Lsi09G007410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 127..314
score: 3.0
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 130..311
score: 7.59
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 136..311
score: 22
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 245..276
score: 0.013coord: 174..201
score:
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 244..277
score: 2.3coord: 278..311
score: 110.0coord: 170..203
score: 46.0coord: 136..169
score: 3
NoneNo IPR availableunknownCoilCoilcoord: 217..244
score: -coord: 133..153
score: -coord: 253..273
scor
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 11..333
score: 1.1E
NoneNo IPR availablePANTHERPTHR26312:SF70SUBFAMILY NOT NAMEDcoord: 11..333
score: 1.1E