Carg17706 (gene) Silver-seed gourd

Overview
NameCarg17706
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein SLOW GREEN 1, chloroplastic
LocationCucurbita_argyrosperma_scaffold_082 : 64148 .. 65158 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTCACATTTGCTTCCATGTCTTCACCCTCTTCTTCTTCTCTTTCATCTATCTTTATTTCTTCTAAATCGAAACCAGTTACACCCCCGAATCTCCGCTTTGCCGCTCCCCTTTCTCGCACTTCTGTTTCTGTGCATCGTTTTAGGGTTAGGGCTTCGTCTGTTCCCGTTTCCAGGAACCACCCTGTTGTTCAATGCTTCAAGAACTACGCCAGAGCTGCGATTCTTATTGGTGCTGCCGCTACCATGGTTGGGAAATTTTCGCATTTGCCTGCCAGAGCGGAGTCGCCGGTGGCTGTAGAGGAGGAAGCTTCGAGAATGGAGGAAGAGCAGCGGATTGTTGAGGACTCGGACCAAGACGGGCAGCAATCCTCGCCGTTGAATGATTTTCTCGAATCGAATTCTGAAGCTGTTGAGGCTCTCAAATCGCTTCTGCAGCAGAAACTTGAAAATAGTGAGGATGAAGAAGCGCTGAAAATCTTGAATCAATTGGTATCTGCTCAGTCGTCGGTGACCGAGTGGAAATTTCTCAAGGCCAGATTGCTCGGCGAAATGGGCAAAACGGAAAATGCACGAGAAGTTTTCGAGGAGATTTTGGCTGAGAATCCATTGTCATTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCAGTGCTCCTGCGCTTAGAACAGGCTTTGAGAATTGCTGAAAACGAAAAGAAAGCGAAGGAGGCCAGGGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGGGGCCTTGACGAGTTACAAAGAATTGATCAAGGAGGATCCTAGCGACTTTAGGCCATACTTCTGTCAAGGAATGATCTACAGCTTGCTTGACAAGAACGAGGAAGCCAGACAGCAATTCAGCAAGTACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTACCTACGGACTCCATTGTCAAGGATGAAAATCTTCGGATCAGATGAGAACTAA

mRNA sequence

ATGAGCTTCACATTTGCTTCCATGTCTTCACCCTCTTCTTCTTCTCTTTCATCTATCTTTATTTCTTCTAAATCGAAACCAGTTACACCCCCGAATCTCCGCTTTGCCGCTCCCCTTTCTCGCACTTCTGTTTCTGTGCATCGTTTTAGGGTTAGGGCTTCGTCTGTTCCCGTTTCCAGGAACCACCCTGTTGTTCAATGCTTCAAGAACTACGCCAGAGCTGCGATTCTTATTGGTGCTGCCGCTACCATGGTTGGGAAATTTTCGCATTTGCCTGCCAGAGCGGAGTCGCCGGTGGCTGTAGAGGAGGAAGCTTCGAGAATGGAGGAAGAGCAGCGGATTGTTGAGGACTCGGACCAAGACGGGCAGCAATCCTCGCCGTTGAATGATTTTCTCGAATCGAATTCTGAAGCTGTTGAGGCTCTCAAATCGCTTCTGCAGCAGAAACTTGAAAATAGTGAGGATGAAGAAGCGCTGAAAATCTTGAATCAATTGGTATCTGCTCAGTCGTCGGTGACCGAGTGGAAATTTCTCAAGGCCAGATTGCTCGGCGAAATGGGCAAAACGGAAAATGCACGAGAAGTTTTCGAGGAGATTTTGGCTGAGAATCCATTGTCATTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCAGTGCTCCTGCGCTTAGAACAGGCTTTGAGAATTGCTGAAAACGAAAAGAAAGCGAAGGAGGCCAGGGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGGGGCCTTGACGAGTTACAAAGAATTGATCAAGGAGGATCCTAGCGACTTTAGGCCATACTTCTGTCAAGGAATGATCTACAGCTTGCTTGACAAGAACGAGGAAGCCAGACAGCAATTCAGCAAGTACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTACCTACGGACTCCATTGTCAAGGATGAAAATCTTCGGATCAGATGAGAACTAA

Coding sequence (CDS)

ATGAGCTTCACATTTGCTTCCATGTCTTCACCCTCTTCTTCTTCTCTTTCATCTATCTTTATTTCTTCTAAATCGAAACCAGTTACACCCCCGAATCTCCGCTTTGCCGCTCCCCTTTCTCGCACTTCTGTTTCTGTGCATCGTTTTAGGGTTAGGGCTTCGTCTGTTCCCGTTTCCAGGAACCACCCTGTTGTTCAATGCTTCAAGAACTACGCCAGAGCTGCGATTCTTATTGGTGCTGCCGCTACCATGGTTGGGAAATTTTCGCATTTGCCTGCCAGAGCGGAGTCGCCGGTGGCTGTAGAGGAGGAAGCTTCGAGAATGGAGGAAGAGCAGCGGATTGTTGAGGACTCGGACCAAGACGGGCAGCAATCCTCGCCGTTGAATGATTTTCTCGAATCGAATTCTGAAGCTGTTGAGGCTCTCAAATCGCTTCTGCAGCAGAAACTTGAAAATAGTGAGGATGAAGAAGCGCTGAAAATCTTGAATCAATTGGTATCTGCTCAGTCGTCGGTGACCGAGTGGAAATTTCTCAAGGCCAGATTGCTCGGCGAAATGGGCAAAACGGAAAATGCACGAGAAGTTTTCGAGGAGATTTTGGCTGAGAATCCATTGTCATTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCAGTGCTCCTGCGCTTAGAACAGGCTTTGAGAATTGCTGAAAACGAAAAGAAAGCGAAGGAGGCCAGGGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGGGGCCTTGACGAGTTACAAAGAATTGATCAAGGAGGATCCTAGCGACTTTAGGCCATACTTCTGTCAAGGAATGATCTACAGCTTGCTTGACAAGAACGAGGAAGCCAGACAGCAATTCAGCAAGTACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTACCTACGGACTCCATTGTCAAGGATGAAAATCTTCGGATCAGATGAGAACTAA

Protein sequence

MSFTFASMSSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Homology
[Close]
BLAST of Carg17706 vs. NCBI nr
Match: XP_022956910.1 (protein SLOW GREEN 1, chloroplastic [Cucurbita moschata] >XP_022956918.1 protein SLOW GREEN 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 615.9 bits (1587), Expect = 8.0e-173
Identity = 332/336 (98.81%), Postives = 334/336 (99.40%), Query Frame = 0 

Query: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVSR 60
           MSFTFASMSSPSSSSLSSIFISSKSKPV PPNLRFAAP+SRTSVSVHRFRVRASSVPVSR
Sbjct: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVPPPNLRFAAPISRTSVSVHRFRVRASSVPVSR 60

Query: 61  NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQ 120
           NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPV VEEEASR+EEEQRIVEDSDQ
Sbjct: 61  NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEEEQRIVEDSDQ 120

Query: 121 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 180
           DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA
Sbjct: 121 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 180

Query: 181 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENE 240
           RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENE
Sbjct: 181 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENE 240

Query: 241 KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEA 300
           KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEA
Sbjct: 241 KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEA 300

Query: 301 RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]
BLAST of Carg17706 vs. NCBI nr
Match: XP_023512073.1 (protein SLOW GREEN 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023512081.1 protein SLOW GREEN 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 613.6 bits (1581), Expect = 4.0e-172
Identity = 331/336 (98.51%), Postives = 333/336 (99.11%), Query Frame = 0 

Query: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVSR 60
           MSFTFASMSSPSSSSLSSIFISSKSKPV PPNLRF APLSRTSVS+HRFRVRASSVPVSR
Sbjct: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSVPVSR 60

Query: 61  NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQ 120
           NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQ
Sbjct: 61  NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQ 120

Query: 121 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 180
           DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA
Sbjct: 121 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 180

Query: 181 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENE 240
           RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLE+ALRIAENE
Sbjct: 181 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENE 240

Query: 241 KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEA 300
           KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELI EDPSDFRPYFCQGMIYSLLDKNEEA
Sbjct: 241 KKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEA 300

Query: 301 RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 RQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]
BLAST of Carg17706 vs. NCBI nr
Match: XP_022990705.1 (protein SLOW GREEN 1, chloroplastic [Cucurbita maxima] >XP_022990706.1 protein SLOW GREEN 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 558.5 bits (1438), Expect = 1.5e-155
Identity = 309/337 (91.69%), Postives = 311/337 (92.28%), Query Frame = 0 

Query: 1   MSFTFASM-SSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVS 60
           MSFTFASM                        NLRFAAPLSRTSVSV+RFRVRASSVPVS
Sbjct: 1   MSFTFASMXXXXXXXXXXXXXXXXXXXXXXXXNLRFAAPLSRTSVSVYRFRVRASSVPVS 60

Query: 61  RNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSD 120
           RNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSD
Sbjct: 61  RNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSD 120

Query: 121 QDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLK 180
           QD QQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLK
Sbjct: 121 QDRQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLK 180

Query: 181 ARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAEN 240
           ARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAEN
Sbjct: 181 ARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAEN 240

Query: 241 EKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEE 300
           EKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEE
Sbjct: 241 EKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEE 300

Query: 301 ARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           ARQQF KYRELSPKK+EVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 ARQQFGKYRELSPKKYEVDGYLRTPLSRMKIFGSDEN 337

[Close]
BLAST of Carg17706 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 540.0 bits (1390), Expect = 5.6e-150
Identity = 297/340 (87.35%), Postives = 314/340 (92.35%), Query Frame = 0 

Query: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPV 60
           MS TFA+MSSPSSSSLSSI  F +SK KPV+PPNLRFAAPLSR SV V RFRVRASS P+
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVSPPNLRFAAPLSRNSVYVQRFRVRASSAPL 60

Query: 61  ---SRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIV 120
              SRNHPVVQC +NYARAAILIGAAATMVGKFSHLPARAESP AV EEASRMEE++++V
Sbjct: 61  PDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQVV 120

Query: 121 EDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEW 180
           EDSD+D QQSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEW
Sbjct: 121 EDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEW 180

Query: 181 KFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALR 240
           KFL ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALR
Sbjct: 181 KFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALR 240

Query: 241 IAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLD 300
           IAE+E KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+KEDP+DFRPYFCQGMIYSLLD
Sbjct: 241 IAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLD 300

Query: 301 KNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           KN EAR+QFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 KNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]
BLAST of Carg17706 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 517.7 bits (1332), Expect = 3.0e-143
Identity = 293/343 (85.42%), Postives = 311/343 (90.67%), Query Frame = 0 

Query: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVT-PPNLRFAAPLSRTSVSVHRFRVRASSVP 60
           MS TFASMSSPSSSSLSSI  F  S SK V+   NLRFAAPLSR S+SVH FRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VSR-NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEE---EQR 120
           V R +HPVVQC +NYA+AAILIGAAATMVGKFS+LPARAE+P AV EEASRMEE   ++R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSA  SVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQA 240
           EWKFL ARLL EMGKTENAREVFEEILA +PLS+EALFENALLMDRCGEGEAVL RLE+A
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSL 300
           LRIAE E+KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+KEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           LDKN EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]
BLAST of Carg17706 vs. TAIR10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein)

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-57
Identity = 147/327 (44.95%), Postives = 184/327 (56.27%), Query Frame = 0 

Query: 9   SSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVSRNHPVVQCF 68
           S  +SSSL S F++ K+ PVT P +     LS         R+RASS   S  +   + F
Sbjct: 4   SLSASSSLVSSFVAVKATPVTGPLIPRRDLLS--------IRIRASSNQNSSGYCFPEKF 63

Query: 69  KNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPL 128
           K++A++AILIGAA +M GKFS LP +AESPV   E+     +E+++ E         +PL
Sbjct: 64  KSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSE--------ITPL 123

Query: 129 NDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGK 188
           ++ L+S  EAVE L+SLLQQKLE  EDEEALK+                           
Sbjct: 124 SELLDSTPEAVETLRSLLQQKLEKGEDEEALKLXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 189 TENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENEKKAKEARD 248
                                                       AL +AE E   KEARD
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVAEAEYLVKEARD 243

Query: 249 VRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYR 308
           VRLI+AQI FLQKNV+ AL SY++L KEDP DFRPYFC+GMIYSLLDKN EA++QF+KYR
Sbjct: 244 VRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYR 303

Query: 309 ELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           ELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 304 ELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of Carg17706 vs. TAIR10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 5.2e-33
Identity = 76/210 (36.19%), Postives = 126/210 (60.00%), Query Frame = 0 

Query: 123 QQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARL 182
           ++   L ++L S+ + VEAL+SL++ ++++ +  EA++++++L+  +    EW  LKA +
Sbjct: 114 EEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANI 173

Query: 183 LGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEG-EAVLLRLEQALRIAENEK 242
               G  E+A+  FEEIL ++PL  EA     +     G+   AV  R+E+A+   + EK
Sbjct: 174 FSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEK 233

Query: 243 KAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEAR 302
             K+ RD +L++AQI+ ++     AL  Y+EL+KE+P DFRPY CQG+IY++L K  EA 
Sbjct: 234 NRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAE 293

Query: 303 QQFSKYRELSPKKFEVDGYLRTPLSRMKIF 332
           +QF K+R L PK      Y    +   K+F
Sbjct: 294 KQFEKFRRLVPKNHPYREYFMDNMVASKLF 323

[Close]
BLAST of Carg17706 vs. TAIR10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-29
Identity = 79/213 (37.09%), Postives = 127/213 (59.62%), Query Frame = 0 

Query: 128 LNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMG 187
           L   L  N   VEAL+SL++ K +    + AL+ILN+L+  Q    EW+ LKA++    G
Sbjct: 118 LEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGG 177

Query: 188 KTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVL----LRLEQALRIAENEKKA 247
             ++A + FEE+L+++P   EA   + L+M    E E+ L     R+ +A+   + E K 
Sbjct: 178 DFDSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESESKLSEIESRINEAIEKCKKENK- 237

Query: 248 KEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQQ 307
           K+ RD  L++AQI+ ++ N   AL  Y+EL+K++P DFRPY CQG+IY+L+ K +EA +Q
Sbjct: 238 KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQ 297

Query: 308 FSKYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 336
           F+++R L P+      YL    L+  K+F  ++
Sbjct: 298 FAEFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

[Close]
BLAST of Carg17706 vs. TAIR10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-28
Identity = 100/334 (29.94%), Postives = 171/334 (51.20%), Query Frame = 0 

Query: 7   SMSSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVSRNHPVVQ 66
           S +  SSS+       S  +P+        + L   S+     + + S  P+ ++ P   
Sbjct: 17  SFTHTSSSTFPKNLFKSSIQPI--------SSLKSASIKASSSKFQNSITPLPKSTP--- 76

Query: 67  CFKNYARAAILIGAAATMVGKFSHLPARA-----ESPVAVE-EEASRMEEEQRIVEDSDQ 126
            F+ +    I +  AA ++    HL + A       P +VE +E   +EEE+R       
Sbjct: 77  -FRLFKSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKENVTLEEEER------- 136

Query: 127 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 186
                  L++ L ++   V+AL+SL++ K+++ +  EA++++++L+  +    EW  LKA
Sbjct: 137 ------ALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKA 196

Query: 187 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEG---EAVLLRLEQALRIA 246
            +    G  + A+  FEEILA++PL  EA   + LLM     G   + V  R+E+A+   
Sbjct: 197 NIFTYSGDLDLAKTGFEEILAKDPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKC 256

Query: 247 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKN 306
           + E    + RD +L++AQI+ ++     AL  Y+EL+KE+P DFRPY CQG+IY+LL K 
Sbjct: 257 KKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKK 316

Query: 307 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIF 332
           ++A +QF  +R+L PK      Y    +   K+F
Sbjct: 317 DKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLF 323

[Close]
BLAST of Carg17706 vs. TAIR10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 124.0 bits (310), Expect = 1.7e-28
Identity = 76/249 (30.52%), Postives = 137/249 (55.02%), Query Frame = 0 

Query: 73  RAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPLNDFL 132
           +AAIL+  +   +G  S  PA A  P A     + +E+E+                   L
Sbjct: 82  KAAILLVGSFVFLGFCSSKPALA-LPTATVVSQAELEDEKM--------------FEKLL 141

Query: 133 ESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENA 192
           E+  E +EA+K+++ +K+   ++E+A+K + +L+  +    EWK L+A     MG+   A
Sbjct: 142 ENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKA 201

Query: 193 REVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENEKKAKEARDVRLI 252
           + ++++IL E PL   AL   A++M +  +  +V   L +A+ +A    +  E R+++++
Sbjct: 202 KRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVL 261

Query: 253 MAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSP 312
           + Q+  ++   E  L  +++++ ++P DFRPY CQG++YSL+DK EEA QQF  Y  L P
Sbjct: 262 IGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVP 314

Query: 313 KKFEVDGYL 322
            +F   G+L
Sbjct: 322 GEFPQKGFL 314

[Close]
BLAST of Carg17706 vs. Swiss-Prot
Match: sp|Q9LS48|SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 4.2e-56
Identity = 147/327 (44.95%), Postives = 184/327 (56.27%), Query Frame = 0 

Query: 9   SSPSSSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHRFRVRASSVPVSRNHPVVQCF 68
           S  +SSSL S F++ K+ PVT P +     LS         R+RASS   S  +   + F
Sbjct: 4   SLSASSSLVSSFVAVKATPVTGPLIPRRDLLS--------IRIRASSNQNSSGYCFPEKF 63

Query: 69  KNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPL 128
           K++A++AILIGAA +M GKFS LP +AESPV   E+     +E+++ E         +PL
Sbjct: 64  KSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSE--------ITPL 123

Query: 129 NDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGK 188
           ++ L+S  EAVE L+SLLQQKLE  EDEEALK+                           
Sbjct: 124 SELLDSTPEAVETLRSLLQQKLEKGEDEEALKLXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 189 TENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENEKKAKEARD 248
                                                       AL +AE E   KEARD
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVAEAEYLVKEARD 243

Query: 249 VRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYR 308
           VRLI+AQI FLQKNV+ AL SY++L KEDP DFRPYFC+GMIYSLLDKN EA++QF+KYR
Sbjct: 244 VRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYR 303

Query: 309 ELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           ELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 304 ELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of Carg17706 vs. TrEMBL
Match: tr|A0A1S3CRV7|A0A1S3CRV7_CUCME (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 2.0e-143
Identity = 293/343 (85.42%), Postives = 311/343 (90.67%), Query Frame = 0 

Query: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVT-PPNLRFAAPLSRTSVSVHRFRVRASSVP 60
           MS TFASMSSPSSSSLSSI  F  S SK V+   NLRFAAPLSR S+SVH FRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VSR-NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEE---EQR 120
           V R +HPVVQC +NYA+AAILIGAAATMVGKFS+LPARAE+P AV EEASRMEE   ++R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSA  SVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQA 240
           EWKFL ARLL EMGKTENAREVFEEILA +PLS+EALFENALLMDRCGEGEAVL RLE+A
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSL 300
           LRIAE E+KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+KEDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           LDKN EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]
BLAST of Carg17706 vs. TrEMBL
Match: tr|A0A0A0KMW6|A0A0A0KMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 8.8e-136
Identity = 268/311 (86.17%), Postives = 283/311 (91.00%), Query Frame = 0 

Query: 32  NLRFAAPLSRTSVSVHRFRVRASSVPV---SRNHPVVQCFKNYARAAILIGAAATMVGKF 91
           NLRFAAPLSR+SVSVH FRVRASSVPV     +HPVV C +NYA+AAILIGAAATMVGKF
Sbjct: 7   NLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKF 66

Query: 92  SHLPARAESPVAVEEEASRMEE---EQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSL 151
           S+LPARAES   V EEASR+EE   + RI EDSDQDG+QSSPLNDFLESNSEAVEALKSL
Sbjct: 67  SNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSL 126

Query: 152 LQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENAREVFEEILAENPL 211
           LQQKLEN EDEEALKIL QLVSA  SVTEWKFL ARLLGEMGKTE+AREVFEEILA NPL
Sbjct: 127 LQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAVNPL 186

Query: 212 SFEALFENALLMDRCGEGEAVLLRLEQALRIAENEKKAKEARDVRLIMAQIQFLQKNVEG 271
           SFEALFENALLMDRCGEGEAV+ RLE+ALRIAENE KAKEARDV+LIMAQIQFLQKNVE 
Sbjct: 187 SFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQKNVEE 246

Query: 272 ALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPL 331
           AL SYKEL+KEDPSDFRPYFCQGMIYSLLDKN EA+QQF+KYRELSPKKFEVDGYLRTPL
Sbjct: 247 ALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPL 306

Query: 332 SRMKIFGSDEN 337
           SRMKIFGSDEN
Sbjct: 307 SRMKIFGSDEN 317

[Close]
BLAST of Carg17706 vs. TrEMBL
Match: tr|V4LCB5|V4LCB5_EUTSA (Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021135mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.9e-95
Identity = 209/335 (62.39%), Postives = 254/335 (75.82%), Query Frame = 0 

Query: 5   FASMSSPS--SSSLSSIFISSKSKPVTPP-NLRFAAPLSRTSVSVHRFRVRASSVPVSRN 64
           F+S+S+PS  SSSL S F++ K+ PVT P N R      R  +SV   R+RASS     +
Sbjct: 2   FSSLSAPSSLSSSLISSFVAVKAPPVTGPLNPR------RDLLSV---RIRASSKQNGSD 61

Query: 65  HPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQD 124
           +      K++A++AILIGAA +M GKFS LP +AESPV   EE     +E+R    +  D
Sbjct: 62  YCFPDKLKSFAKSAILIGAAVSMTGKFSALPVKAESPVTTTEETLSEVKEER----NASD 121

Query: 125 GQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKAR 184
            + SSPL++ L+S  EAV+ L+SLLQQKLE  EDEEALK+L +LV+AQ   TEWKFL AR
Sbjct: 122 IEPSSPLSELLDSTPEAVQTLRSLLQQKLEKGEDEEALKLLERLVTAQPDETEWKFLMAR 181

Query: 185 LLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENEK 244
           LLGEMG+ ENAR++FEEIL  NPL FEALFENALLMDR GEG+AV+ RLE AL +A+ E 
Sbjct: 182 LLGEMGRPENARQMFEEILRRNPLCFEALFENALLMDRSGEGDAVMQRLEDALAVAQAEN 241

Query: 245 KAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEAR 304
             KE RDVRLI+AQIQFLQKNV+ AL SY+EL KEDP DFRPYFC+GMIYSLLDKN EA+
Sbjct: 242 MVKEMRDVRLIIAQIQFLQKNVDDALKSYEELTKEDPKDFRPYFCRGMIYSLLDKNVEAK 301

Query: 305 QQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           +QF+KYRELSPKKFEV+GYLRTPLSRMK+FGS E+
Sbjct: 302 EQFAKYRELSPKKFEVEGYLRTPLSRMKLFGSGED 323

[Close]
BLAST of Carg17706 vs. TrEMBL
Match: tr|A0A2K1ZH54|A0A2K1ZH54_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=4 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 1.3e-94
Identity = 203/333 (60.96%), Postives = 244/333 (73.27%), Query Frame = 0 

Query: 13  SSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHR------FRVRASSVPVSRNH---- 72
           +S+L++ FI  K    TP +    +PL  T++  H        ++  ++   S NH    
Sbjct: 2   NSTLAASFIHLK----TPSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHTSKS 61

Query: 73  PVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDG 132
           P+ Q  K   + AILIG AA++ GKF  LPA+AE+P A+ E+   +E         D   
Sbjct: 62  PLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEXXXXXXXXXD--- 121

Query: 133 QQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARL 192
             S+PL  FLESN+EA+E+LKSLLQQKLEN +DEEALKI+  LVSAQ  VTEWKFL ARL
Sbjct: 122 -PSTPLQAFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKFLMARL 181

Query: 193 LGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIAENEKK 252
           L E G+ ++AR VFEEIL  NPLSFEALFENALLMDRCGEGEAV+ RL+ AL IAE E K
Sbjct: 182 LNETGRAQDARNVFEEILVANPLSFEALFENALLMDRCGEGEAVIRRLQGALDIAEEENK 241

Query: 253 AKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKNEEARQ 312
            KEARDVRLIMAQIQFLQKNVE AL SY+EL KEDP DFRPYFC+GMIYSLLD+NEEA++
Sbjct: 242 VKEARDVRLIMAQIQFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDRNEEAKE 301

Query: 313 QFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           QF+KYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 302 QFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 326

[Close]
BLAST of Carg17706 vs. TrEMBL
Match: tr|A0A2K1ZH53|A0A2K1ZH53_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.4e-93
Identity = 203/338 (60.06%), Postives = 244/338 (72.19%), Query Frame = 0 

Query: 13  SSSLSSIFISSKSKPVTPPNLRFAAPLSRTSVSVHR------FRVRASSVPVSRNH---- 72
           +S+L++ FI  K    TP +    +PL  T++  H        ++  ++   S NH    
Sbjct: 2   NSTLAASFIHLK----TPSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHTSKS 61

Query: 73  PVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEE-----EQRIVED 132
           P+ Q  K   + AILIG AA++ GKF  LPA+AE+P A+ E+   +EE            
Sbjct: 62  PLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEEXXXXXXXXXXXX 121

Query: 133 SDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKF 192
                  S+PL  FLESN+EA+E+LKSLLQQKLEN +DEEALKI+  LVSAQ  VTEWKF
Sbjct: 122 XXXXXXPSTPLQAFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKF 181

Query: 193 LKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIA 252
           L ARLL E G+ ++AR VFEEIL  NPLSFEALFENALLMDRCGEGEAV+ RL+ AL IA
Sbjct: 182 LMARLLNETGRAQDARNVFEEILVANPLSFEALFENALLMDRCGEGEAVIRRLQGALDIA 241

Query: 253 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKN 312
           E E K KEARDVRLIMAQIQFLQKNVE AL SY+EL KEDP DFRPYFC+GMIYSLLD+N
Sbjct: 242 EEENKVKEARDVRLIMAQIQFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDRN 301

Query: 313 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           EEA++QF+KYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 302 EEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 335

The following BLAST results are available for this feature:
BLAST of Carg17706 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022956910.18.0e-17398.81protein SLOW GREEN 1, chloroplastic [Cucurbita moschata] >XP_022956918.1 protein... [more]
XP_023512073.14.0e-17298.51protein SLOW GREEN 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023512081.1... [more]
XP_022990705.11.5e-15591.69protein SLOW GREEN 1, chloroplastic [Cucurbita maxima] >XP_022990706.1 protein S... [more]
XP_022146470.15.6e-15087.35protein SLOW GREEN 1, chloroplastic [Momordica charantia][more]
XP_008466719.13.0e-14385.42PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo][more]
BLAST of Carg17706 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18420.12.3e-5744.95Protein prenylyltransferase superfamily protein[more]
AT2G37400.15.2e-3336.19Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G02590.14.6e-2937.09Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53560.11.3e-2829.94Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G39470.11.7e-2830.52Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Carg17706 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LS48|SG1_ARATH4.2e-5644.95protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ... [more]
BLAST of Carg17706 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CRV7|A0A1S3CRV7_CUCME2.0e-14385.42protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4... [more]
tr|A0A0A0KMW6|A0A0A0KMW6_CUCSA8.8e-13686.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1[more]
tr|V4LCB5|V4LCB5_EUTSA9.9e-9562.39Uncharacterized protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10021135mg PE=... [more]
tr|A0A2K1ZH54|A0A2K1ZH54_POPTR1.3e-9460.96Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=... [more]
tr|A0A2K1ZH53|A0A2K1ZH53_POPTR1.4e-9360.06Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg17706-RACarg17706-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..276
NoneNo IPR availableCOILSCoilCoilcoord: 227..247
NoneNo IPR availableCOILSCoilCoilcoord: 136..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..118
NoneNo IPR availablePANTHERPTHR26312:SF70PROTEIN SLOW GREEN 1, CHLOROPLASTICcoord: 33..335
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 33..335
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 281..314
e-value: 25.0
score: 11.4
coord: 173..206
e-value: 80.0
score: 7.0
coord: 247..280
e-value: 10.0
score: 14.8
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 177..206
e-value: 0.1
score: 13.2
coord: 248..279
e-value: 0.026
score: 15.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 247..280
score: 6.933
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 173..206
score: 6.284
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 281..314
score: 8.142
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 248..318
e-value: 5.6E-10
score: 40.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 68..247
e-value: 2.8E-11
score: 45.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 134..314
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 139..314
score: 18.996