Cla97C01G007370 (gene) Watermelon (97103) v2

Overview
NameCla97C01G007370
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionprotein SLOW GREEN 1, chloroplastic
LocationCla97Chr01 : 7596892 .. 7597911 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGGGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

mRNA sequence

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGGGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Coding sequence (CDS)

ATGAGCTCCACATTTGCTTCCATGTCTTCACCTTCTTCTTCATCTCTTTCATCCATCTTCAATTTCAATGCATCTAAATCTAAATCAGTCTCACTCCCGAAGAATCTTCGTTTTGCTGCTCCCCTACCTCGCAATTCTGTTTCCGTGTATCCCTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCAGCAACCACCCTGTTGTTCAATGCCTCCGCAACTACGCCAGAGCTGCGATTCTCGTCGGTGCTGCAGCCACCATGGTTGGGAAATTCTCGCATTTGCCTGCCAGAGCTGAATCTCCAGGGGCGGTAGCTGAGGAAGCTTCAAGAATAGAGGAAGATCAGGGGATTGTTGAGGATTCGGACCAGGATGGGAAGCAATCCTCGCCGTTGAATGACTTTCTCGAATCGAATTCTGAAGCTGTCGAGGCGCTCAAGTCGCTTCTGCAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCACTGAAAATTTTGAAGCAATTGGTATCTGCTCAGCCGTCGGTGACGGAGTGGAAATTTCTGATGGCCAGGTTGCTTGGGGAAATGGGCAAAACGGAAAATGCACGAGATGTTTTTGAAGAGATTTTGGCTGTGAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCTGTGCTCCGGCGATTAGAAGAGGCTTTGAGAATTGCCGAGAATGAAAACAAAAAGAAGGAAGCCAGAGATGTGAGGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTAGAGGAAGCCTTGAAGAGTTACAAAGAATTGGTGAAGGAGGATCCTAATGACTTTAGGCCTTACTTCTGTCAGGGAATGATCTACAGCTTGCTTGATAAGAATGTGGAGGCCAGACAGCAATTCGCCAAGTACAGGGAGCTCTCACCGAAGAAATTCGAGGTTGATGGGTACCTACGAACTCCATTATCAAGGATGAAAATCTTTGGATCAGATGAAAACTAA

Protein sequence

MSSTFASMSSPSSSSLSSIFNFNASKSKSVSLPKNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Homology
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BLAST of Cla97C01G007370 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 543.1 bits (1398), Expect = 6.6e-151
Identity = 294/341 (86.22%), Postives = 306/341 (89.74%), Query Frame = 0 

Query: 1   MSSTFASMSSPXXXXXXXXXXXXXXXXXXXXLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFA+MSSP                     P NLRFAAPL RNSV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPS---NHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGI 120
           +P    NHPVVQCLRNYARAAIL+GAAATMVGKFSHLPARAESP AVAEEASR+EED+ +
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEEDRQV 120

Query: 121 VEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180
           VEDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE
Sbjct: 121 VEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTE 180

Query: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240
           WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL
Sbjct: 181 WKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEAL 240

Query: 241 RIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300
           RIAE+ENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL
Sbjct: 241 RIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLL 300

Query: 301 DKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           DKNVEAR+QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 DKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

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BLAST of Cla97C01G007370 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 535.4 bits (1378), Expect = 1.4e-148
Identity = 289/343 (84.26%), Postives = 307/343 (89.50%), Query Frame = 0 

Query: 1   MSSTFASMSSPXXXXXXXXXXXXXXXXXXXXLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSP                       NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQG 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P AVAEEASR+EE   D+ 
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

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BLAST of Cla97C01G007370 vs. NCBI nr
Match: XP_004149472.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 535.0 bits (1377), Expect = 1.8e-148
Identity = 289/345 (83.77%), Postives = 306/345 (88.70%), Query Frame = 0 

Query: 1   MSSTFASMSSPXXXXXXXXXXXXXXXXXXXXLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFAS+SSP                       NLRFAAPL R+SVSV+PFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  VP---SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---D 120
           VP   ++HPVV CLRNYA+AAIL+GAAATMVGKFS+LPARAES   VAEEASR+EE   D
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 QGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180
             I EDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240
           VTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPLSFEALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIY 300
           EALRIAENENK KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           SLLDKN+EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]
BLAST of Cla97C01G007370 vs. NCBI nr
Match: KGN49762.1 (hypothetical protein Csa_5G114590 [Cucumis sativus])

HSP 1 Score: 525.0 bits (1351), Expect = 1.9e-145
Identity = 279/311 (89.71%), Postives = 295/311 (94.86%), Query Frame = 0 

Query: 35  NLRFAAPLPRNSVSVYPFRVRASSVPVP---SNHPVVQCLRNYARAAILVGAAATMVGKF 94
           NLRFAAPL R+SVSV+PFRVRASSVPVP   ++HPVV CLRNYA+AAIL+GAAATMVGKF
Sbjct: 7   NLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKF 66

Query: 95  SHLPARAESPGAVAEEASRIEE---DQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSL 154
           S+LPARAES   VAEEASR+EE   D  I EDSDQDG+QSSPLNDFLESNSEAVEALKSL
Sbjct: 67  SNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSL 126

Query: 155 LQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPL 214
           LQQKLENGEDEEALKILKQLVSA PSVTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPL
Sbjct: 127 LQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAVNPL 186

Query: 215 SFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEE 274
           SFEALFENALLMDRCGEGEAV+RRLEEALRIAENENK KEARDV+LIMAQIQFLQKNVEE
Sbjct: 187 SFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQKNVEE 246

Query: 275 ALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPL 334
           ALKSYKELVKEDP+DFRPYFCQGMIYSLLDKN+EA+QQFAKYRELSPKKFEVDGYLRTPL
Sbjct: 247 ALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPL 306

Query: 335 SRMKIFGSDEN 340
           SRMKIFGSDEN
Sbjct: 307 SRMKIFGSDEN 317

[Close]
BLAST of Cla97C01G007370 vs. NCBI nr
Match: XP_022956910.1 (protein SLOW GREEN 1, chloroplastic [Cucurbita moschata] >XP_022956918.1 protein SLOW GREEN 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 523.1 bits (1346), Expect = 7.1e-145
Identity = 284/339 (83.78%), Postives = 295/339 (87.02%), Query Frame = 0 

Query: 1   MSSTFASMSSPXXXXXXXXXXXXXXXXXXXXLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MS TFASMSSP                     P NLRFAAP+ R SVSV+ FRVRASSVP
Sbjct: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVP---PPNLRFAAPISRTSVSVHRFRVRASSVP 60

Query: 61  VPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVED 120
           V  NHPVVQC +NYARAAIL+GAAATMVGKFSHLPARAESP  V EEASRIEE+Q IVED
Sbjct: 61  VSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEEEQRIVED 120

Query: 121 SDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKF 180
           SDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSAQ SVTEWKF
Sbjct: 121 SDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKF 180

Query: 181 LMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIA 240
           L ARLLGEMGKTENAR+VFEEILA NPLSFEALFENALLMDRCGEGEAVL RLE+ALRIA
Sbjct: 181 LKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLEQALRIA 240

Query: 241 ENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKN 300
           ENE K KEARDVRLIMAQIQFLQKNVE AL SYKEL+KEDP+DFRPYFCQGMIYSLLDKN
Sbjct: 241 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIYSLLDKN 300

Query: 301 VEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
            EARQQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]
BLAST of Cla97C01G007370 vs. TrEMBL
Match: tr|A0A1S3CRV7|A0A1S3CRV7_CUCME (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 9.2e-149
Identity = 289/343 (84.26%), Postives = 307/343 (89.50%), Query Frame = 0 

Query: 1   MSSTFASMSSPXXXXXXXXXXXXXXXXXXXXLPKNLRFAAPLPRNSVSVYPFRVRASSVP 60
           MSSTFASMSSP                       NLRFAAPL R+S+SV+PFRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VP-SNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEE---DQG 120
           VP ++HPVVQCLRNYA+AAIL+GAAATMVGKFS+LPARAE+P AVAEEASR+EE   D+ 
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PSVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEA 240
           EWKFLMARLL EMGKTENAR+VFEEILAV+PLS+EALFENALLMDRCGEGEAVLRRLEEA
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSL 300
           LRIAE E K KEARDV+LIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 340
           LDKN EA+QQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]
BLAST of Cla97C01G007370 vs. TrEMBL
Match: tr|A0A0A0KMW6|A0A0A0KMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.2e-145
Identity = 279/311 (89.71%), Postives = 295/311 (94.86%), Query Frame = 0 

Query: 35  NLRFAAPLPRNSVSVYPFRVRASSVPVP---SNHPVVQCLRNYARAAILVGAAATMVGKF 94
           NLRFAAPL R+SVSV+PFRVRASSVPVP   ++HPVV CLRNYA+AAIL+GAAATMVGKF
Sbjct: 7   NLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKF 66

Query: 95  SHLPARAESPGAVAEEASRIEE---DQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSL 154
           S+LPARAES   VAEEASR+EE   D  I EDSDQDG+QSSPLNDFLESNSEAVEALKSL
Sbjct: 67  SNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSL 126

Query: 155 LQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPL 214
           LQQKLENGEDEEALKILKQLVSA PSVTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPL
Sbjct: 127 LQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAVNPL 186

Query: 215 SFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEE 274
           SFEALFENALLMDRCGEGEAV+RRLEEALRIAENENK KEARDV+LIMAQIQFLQKNVEE
Sbjct: 187 SFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQKNVEE 246

Query: 275 ALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPL 334
           ALKSYKELVKEDP+DFRPYFCQGMIYSLLDKN+EA+QQFAKYRELSPKKFEVDGYLRTPL
Sbjct: 247 ALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPL 306

Query: 335 SRMKIFGSDEN 340
           SRMKIFGSDEN
Sbjct: 307 SRMKIFGSDEN 317

[Close]
BLAST of Cla97C01G007370 vs. TrEMBL
Match: tr|A0A2K1ZH54|A0A2K1ZH54_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.6e-100
Identity = 202/298 (67.79%), Postives = 237/298 (79.53%), Query Frame = 0 

Query: 45  NSVSVYPFRVRASSVPVPSNH----PVVQCLRNYARAAILVGAAATMVGKFSHLPARAES 104
           NS S    ++  ++    SNH    P+ Q L+   + AIL+G AA++ GKF  LPA+AE+
Sbjct: 33  NSTSTPSLKIPKAAASSSSNHTSKSPLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAET 92

Query: 105 PGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEE 164
           P A+ E+   +E         D     S+PL  FLESN+EA+E+LKSLLQQKLENG+DEE
Sbjct: 93  PAALTEQNPALEXXXXXXXXXD----PSTPLQAFLESNAEAIESLKSLLQQKLENGQDEE 152

Query: 165 ALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLM 224
           ALKI+K LVSAQP VTEWKFLMARLL E G+ ++AR+VFEEIL  NPLSFEALFENALLM
Sbjct: 153 ALKIIKLLVSAQPEVTEWKFLMARLLNETGRAQDARNVFEEILVANPLSFEALFENALLM 212

Query: 225 DRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKED 284
           DRCGEGEAV+RRL+ AL IAE ENK KEARDVRLIMAQIQFLQKNVEEALKSY+EL KED
Sbjct: 213 DRCGEGEAVIRRLQGALDIAEEENKVKEARDVRLIMAQIQFLQKNVEEALKSYQELSKED 272

Query: 285 PNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           P DFRPYFC+GMIYSLLD+N EA++QFAKYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 273 PEDFRPYFCRGMIYSLLDRNEEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 326

[Close]
BLAST of Cla97C01G007370 vs. TrEMBL
Match: tr|A0A2K1ZH53|A0A2K1ZH53_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.3e-99
Identity = 202/303 (66.67%), Postives = 237/303 (78.22%), Query Frame = 0 

Query: 45  NSVSVYPFRVRASSVPVPSNH----PVVQCLRNYARAAILVGAAATMVGKFSHLPARAES 104
           NS S    ++  ++    SNH    P+ Q L+   + AIL+G AA++ GKF  LPA+AE+
Sbjct: 33  NSTSTPSLKIPKAAASSSSNHTSKSPLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAET 92

Query: 105 PGAVAEEASRIEE-----DQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLEN 164
           P A+ E+   +EE                   S+PL  FLESN+EA+E+LKSLLQQKLEN
Sbjct: 93  PAALTEQNPALEEXXXXXXXXXXXXXXXXXXPSTPLQAFLESNAEAIESLKSLLQQKLEN 152

Query: 165 GEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFE 224
           G+DEEALKI+K LVSAQP VTEWKFLMARLL E G+ ++AR+VFEEIL  NPLSFEALFE
Sbjct: 153 GQDEEALKIIKLLVSAQPEVTEWKFLMARLLNETGRAQDARNVFEEILVANPLSFEALFE 212

Query: 225 NALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKE 284
           NALLMDRCGEGEAV+RRL+ AL IAE ENK KEARDVRLIMAQIQFLQKNVEEALKSY+E
Sbjct: 213 NALLMDRCGEGEAVIRRLQGALDIAEEENKVKEARDVRLIMAQIQFLQKNVEEALKSYQE 272

Query: 285 LVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFG 339
           L KEDP DFRPYFC+GMIYSLLD+N EA++QFAKYRELSPKKFEV+GYLRT LSRMK+FG
Sbjct: 273 LSKEDPEDFRPYFCRGMIYSLLDRNEEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFG 332

[Close]
BLAST of Cla97C01G007370 vs. TrEMBL
Match: tr|B9HVN0|B9HVN0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G098500v3 PE=4 SV=2)

HSP 1 Score: 367.1 bits (941), Expect = 4.3e-98
Identity = 193/276 (69.93%), Postives = 230/276 (83.33%), Query Frame = 0 

Query: 65  HPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIEEDQGIVE--DSD 124
           +P+ Q L+   + AIL+G  A+M GKF  LPA+AE+P A+ E+   +EE++  +E   + 
Sbjct: 61  NPLTQTLKTLTKTAILIGVTASMAGKFPVLPAKAENPAALTEQNPTLEEEEEGMEKHQNQ 120

Query: 125 QDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLM 184
                S+PL  FLESN+EA+E+LKSLLQQKLE G+D+EAL ILKQLVSAQP VTEWKFLM
Sbjct: 121 NQSDASTPLEAFLESNAEAIESLKSLLQQKLEKGQDDEALNILKQLVSAQPEVTEWKFLM 180

Query: 185 ARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAEN 244
           ARLL EM + ++AR+VFEEIL VNPLSFEALFENALLM+R GEG+AV+RRL EAL IAE 
Sbjct: 181 ARLLNEMRRVQDARNVFEEILVVNPLSFEALFENALLMERSGEGDAVIRRLREALDIAEE 240

Query: 245 ENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVE 304
           ENK KEARDVRLIMAQIQFLQKNVEEAL+SY+EL  EDP DFRPYFC+GMIYSLLD+N E
Sbjct: 241 ENKVKEARDVRLIMAQIQFLQKNVEEALESYQELSNEDPKDFRPYFCRGMIYSLLDRNEE 300

Query: 305 ARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           A++QFAKYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 301 AKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 336

[Close]
BLAST of Cla97C01G007370 vs. Swiss-Prot
Match: sp|Q9LS48|SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.7e-55
Identity = 133/286 (46.50%), Postives = 165/286 (57.69%), Query Frame = 0 

Query: 53  RVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIE 112
           R+RASS    S +   +  +++A++AIL+GAA +M GKFS LP +AESP    E+     
Sbjct: 37  RIRASSNQNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYE-- 96

Query: 113 EDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQ 172
                 E  ++   + +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+        
Sbjct: 97  ------EVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLXXXXXXXX 156

Query: 173 PSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRR 232
                                                                       
Sbjct: 157 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 216

Query: 233 LEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGM 292
              AL +AE E   KEARDVRLI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GM
Sbjct: 217 XXXALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGM 276

Query: 293 IYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           IYSLLDKNVEA++QFAKYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 277 IYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of Cla97C01G007370 vs. Swiss-Prot
Match: sp|Q8IUR5|TMTC1_HUMAN (Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=TMTC1 PE=1 SV=3)

HSP 1 Score: 46.2 bits (108), Expect = 8.3e-04
Identity = 40/180 (22.22%), Postives = 83/180 (46.11%), Query Frame = 0 

Query: 143 EALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEI 202
           E L  L       G  EEAL+I ++  + QPS  E +  +A++L  MG+T+ A  +   I
Sbjct: 684 EILSPLGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHI 743

Query: 203 LAVNPLSFEALFENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFL 262
           ++      E     + +  +    +  L  +++AL++   + K         +++++ F 
Sbjct: 744 VSEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPK---------VISELFFT 803

Query: 263 QKN-------VEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSP 316
           + N       +++A +SY+  V+ +P+  + +   G I  +  K V AR  + +  +L P
Sbjct: 804 KGNQLREQNLLDKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQLVP 854

[Close]
BLAST of Cla97C01G007370 vs. TAIR10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein)

HSP 1 Score: 217.2 bits (552), Expect = 1.5e-56
Identity = 133/286 (46.50%), Postives = 165/286 (57.69%), Query Frame = 0 

Query: 53  RVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSHLPARAESPGAVAEEASRIE 112
           R+RASS    S +   +  +++A++AIL+GAA +M GKFS LP +AESP    E+     
Sbjct: 37  RIRASSNQNSSGYCFPEKFKSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYE-- 96

Query: 113 EDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQ 172
                 E  ++   + +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+        
Sbjct: 97  ------EVKEEKLSEITPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLXXXXXXXX 156

Query: 173 PSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRR 232
                                                                       
Sbjct: 157 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 216

Query: 233 LEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGM 292
              AL +AE E   KEARDVRLI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GM
Sbjct: 217 XXXALAVAEAEYLVKEARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGM 276

Query: 293 IYSLLDKNVEARQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 339
           IYSLLDKNVEA++QFAKYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 277 IYSLLDKNVEAKEQFAKYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of Cla97C01G007370 vs. TAIR10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 2.4e-33
Identity = 88/254 (34.65%), Postives = 143/254 (56.30%), Query Frame = 0 

Query: 83  AAATMVGKFSHLPARA-ESPGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEA 142
           AAA  +      P+ A  +P A       +++  G V   +++      L ++L S+ + 
Sbjct: 74  AAALFLVNLQLKPSPAIAAPVAATPLMESLKQSNGNVSFEEEE----RSLEEYLASHPDD 133

Query: 143 VEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEE 202
           VEAL+SL++ ++++ +  EA++++ +L+  +P   EW  L A +    G  E+A+  FEE
Sbjct: 134 VEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGFEE 193

Query: 203 ILAVNPLSFEALFENALLMDRCGEG-EAVLRRLEEALRIAENENKKKEARDVRLIMAQIQ 262
           IL  +PL  EA     +     G+   AV +R+EEA+   + E  +K+ RD +L++AQI+
Sbjct: 194 ILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIR 253

Query: 263 FLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEV 322
            ++    EALK Y+ELVKE+P DFRPY CQG+IY++L K  EA +QF K+R L PK    
Sbjct: 254 VIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNHPY 313

Query: 323 DGYLRTPLSRMKIF 335
             Y    +   K+F
Sbjct: 314 REYFMDNMVASKLF 323

[Close]
BLAST of Cla97C01G007370 vs. TAIR10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-32
Identity = 93/291 (31.96%), Postives = 156/291 (53.61%), Query Frame = 0 

Query: 34  KNLRFAAPLPRNSVSVYPFRVRASSVPVPSNHPVVQCLRNYARAAILVGAAATMVGKFSH 93
           K+  FA  L +      P  +  SS  + S+   VQ L    +AAIL+  +   +G  S 
Sbjct: 42  KSRPFAPRLAQPDNFAPPLPLIRSSTSLLSSKDFVQMLAR--KAAILLVGSFVFLGFCSS 101

Query: 94  LPARAESPGAVAEEASRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEALKSLLQQKL 153
            PA A     V  +A    ED+ + E               LE+  E +EA+K+++ +K+
Sbjct: 102 KPALALPTATVVSQAEL--EDEKMFE-------------KLLENEPENMEAMKAVVYKKM 161

Query: 154 ENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEAL 213
             G++E+A+K +++L+  +P   EWK L A     MG+   A+ ++++IL   PL   AL
Sbjct: 162 RRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKEQPLLIRAL 221

Query: 214 FENALLMDRCGEGEAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFLQKNVEEALKSY 273
              A++M +  +  +V   L EA+ +A   N+  E R++++++ Q+  ++   EE LK +
Sbjct: 222 HGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNIQVLIGQMHIVEGQFEEGLKIF 281

Query: 274 KELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDGYL 325
           +++V ++P DFRPY CQG++YSL+DK  EA QQF  Y  L P +F   G+L
Sbjct: 282 QQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGFL 314

[Close]
BLAST of Cla97C01G007370 vs. TAIR10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 134.8 bits (338), Expect = 9.9e-32
Identity = 100/312 (32.05%), Postives = 165/312 (52.88%), Query Frame = 0 

Query: 33  PKNLRFAAPLPRNSVSVYPFRVRASS-----VPVPSNHPVVQCLRNYARAAILVGAAATM 92
           PKNL  ++  P +S+     +  +S       P+P + P     R +    I +  AA +
Sbjct: 27  PKNLFKSSIQPISSLKSASIKASSSKFQNSITPLPKSTP----FRLFKSTCITLTTAAAL 86

Query: 93  VGKFSHLPARAESPGAVAEEA--SRIEEDQGIVEDSDQDGKQSSPLNDFLESNSEAVEAL 152
           +    HL    +SP   A  A    +E  + +  + ++       L++ L ++   V+AL
Sbjct: 87  LLANLHL----KSPAIAAPIAPPPSVESKENVTLEEEE-----RALDEHLITHPSDVDAL 146

Query: 153 KSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMGKTENARDVFEEILAV 212
           +SL++ K+++ +  EA++++ +L+  +P   EW  L A +    G  + A+  FEEILA 
Sbjct: 147 RSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAK 206

Query: 213 NPLSFEALFENALLMDRCGEG---EAVLRRLEEALRIAENENKKKEARDVRLIMAQIQFL 272
           +PL  EA   + LLM     G   + V  R+EEA+   + EN + + RD +L++AQI+ +
Sbjct: 207 DPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVI 266

Query: 273 QKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQFAKYRELSPKKFEVDG 332
           +    EALK Y+ELVKE+P DFRPY CQG+IY+LL K  +A +QF  +R+L PK      
Sbjct: 267 EGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYRE 323

Query: 333 YLRTPLSRMKIF 335
           Y    +   K+F
Sbjct: 327 YFMDNMIATKLF 323

[Close]
BLAST of Cla97C01G007370 vs. TAIR10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-30
Identity = 83/213 (38.97%), Postives = 126/213 (59.15%), Query Frame = 0 

Query: 131 LNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPSVTEWKFLMARLLGEMG 190
           L   L  N   VEAL+SL++ K +    + AL+IL +L+  QP   EW+ L A++    G
Sbjct: 118 LEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGG 177

Query: 191 KTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVL----RRLEEALRIAENENKK 250
             ++A   FEE+L+ +P   EA   + L+M    E E+ L     R+ EA+   + EN K
Sbjct: 178 DFDSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESESKLSEIESRINEAIEKCKKEN-K 237

Query: 251 KEARDVRLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIYSLLDKNVEARQQ 310
           K+ RD  L++AQI+ ++ N  EAL+ Y+ELVK++P DFRPY CQG+IY+L+ K  EA +Q
Sbjct: 238 KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQ 297

Query: 311 FAKYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 339
           FA++R L P+      YL    L+  K+F  ++
Sbjct: 298 FAEFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

The following BLAST results are available for this feature:
BLAST of Cla97C01G007370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022146470.16.6e-15186.22protein SLOW GREEN 1, chloroplastic [Momordica charantia][more]
XP_008466719.11.4e-14884.26PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo][more]
XP_004149472.11.8e-14883.77PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus][more]
KGN49762.11.9e-14589.71hypothetical protein Csa_5G114590 [Cucumis sativus][more]
XP_022956910.17.1e-14583.78protein SLOW GREEN 1, chloroplastic [Cucurbita moschata] >XP_022956918.1 protein... [more]
BLAST of Cla97C01G007370 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CRV7|A0A1S3CRV7_CUCME9.2e-14984.26protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4... [more]
tr|A0A0A0KMW6|A0A0A0KMW6_CUCSA1.2e-14589.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1[more]
tr|A0A2K1ZH54|A0A2K1ZH54_POPTR1.6e-10067.79Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=... [more]
tr|A0A2K1ZH53|A0A2K1ZH53_POPTR1.3e-9966.67Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=... [more]
tr|B9HVN0|B9HVN0_POPTR4.3e-9869.93Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G098500v3 PE=... [more]
BLAST of Cla97C01G007370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LS48|SG1_ARATH2.7e-5546.50protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ... [more]
sp|Q8IUR5|TMTC1_HUMAN8.3e-0422.22Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=TMT... [more]
BLAST of Cla97C01G007370 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18420.11.5e-5646.50Protein prenylyltransferase superfamily protein[more]
AT2G37400.12.4e-3334.65Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G39470.14.4e-3231.96Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53560.19.9e-3232.05Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G02590.12.4e-3038.97Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009507 chloroplast
cellular_component GO:0009536 plastid
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G007370.1Cla97C01G007370.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 223..250
NoneNo IPR availableCOILSCoilCoilcoord: 139..159
NoneNo IPR availableCOILSCoilCoilcoord: 259..279
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 27..338
NoneNo IPR availablePANTHERPTHR26312:SF70PROTEIN SLOW GREEN 1, CHLOROPLASTICcoord: 27..338
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 176..209
e-value: 46.0
score: 9.1
coord: 284..317
e-value: 120.0
score: 5.6
coord: 250..283
e-value: 0.48
score: 19.5
coord: 142..175
e-value: 310.0
score: 1.8
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 180..207
e-value: 0.21
score: 12.2
coord: 251..282
e-value: 0.0045
score: 17.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 176..209
score: 7.434
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 210..243
score: 5.192
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 142..175
score: 6.49
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 284..317
score: 6.726
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 250..283
score: 8.437
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 125..325
e-value: 9.4E-26
score: 92.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 136..317
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 142..317
score: 23.476

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G007370Cla005839Watermelon (97103) v1wmwmbB236
Cla97C01G007370Csa5G114590Cucumber (Chinese Long) v2cuwmbB337
Cla97C01G007370MELO3C005213Melon (DHL92) v3.5.1mewmbB009
Cla97C01G007370ClCG01G006980Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G007370CSPI05G02170Wild cucumber (PI 183967)cpiwmbB350
Cla97C01G007370Cucsa.377330Cucumber (Gy14) v1cgywmbB645
Cla97C01G007370Lsi09G007410Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G007370CsGy5G012260Cucumber (Gy14) v2cgybwmbB320
Cla97C01G007370MELO3C005213.2Melon (DHL92) v3.6.1medwmbB008
Cla97C01G007370Carg17706Silver-seed gourdcarwmbB0501
Cla97C01G007370CsaV3_5G017400Cucumber (Chinese Long) v3cucwmbB352
Cla97C01G007370Bhi12G000886Wax gourdwgowmbB054
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G007370Silver-seed gourdcarwmbB0858
Cla97C01G007370Cucurbita maxima (Rimu)cmawmbB289
Cla97C01G007370Cucurbita maxima (Rimu)cmawmbB705
Cla97C01G007370Cucurbita moschata (Rifu)cmowmbB271
Cla97C01G007370Cucurbita moschata (Rifu)cmowmbB676