CsGy5G012260 (gene) Cucumber (Gy14) v2

Overview
NameCsGy5G012260
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionprotein SLOW GREEN 1, chloroplastic
LocationChr5 : 14574753 .. 14575790 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTCCACATTTGCTTCCATCTCTTCACCTTCTTCTTCATCTTTTTCATCCATCTTCAATTTCAATCCATCTAATTCTAAAATGGTCTCATTCTCGAACAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAGTTCCGTTTCTGTGCATCCGTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCGTTCCCAGGACCCACCACCCTGTTGTTCATTGTCTCCGCAACTACGCCAAAGCTGCGATTCTCATTGGTGCTGCCGCCACCATGGTTGGGAAGTTCTCGAATTTGCCTGCCAGAGCTGAATCGTCTGCGGTGGTGGCTGAGGAAGCTTCAAGAGTGGAGGAAACCACCTCCGATCATCGGATTTTTGAGGATTCAGACCAGGACGGGAGGCAATCCTCGCCGTTAAATGACTTTCTCGAATCGAATTCTGAGGCTGTCGAGGCCCTCAAATCTCTCCTACAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCGCTAAAAATTTTGAAGCAATTGGTATCTGCTCTGCCGTCAGTGACTGAGTGGAAATTTCTGATGGCTAGGTTGCTTGGGGAAATGGGCAAAACGGAACATGCAAGAGAAGTTTTTGAAGAGATTTTGGCTGTCAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAAGCTGTGATTCGGCGATTGGAAGAAGCTTTGAGAATCGCTGAGAACGAAAACAAAGCTAAGGAAGCCAGAGATGTGAAGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTTGAGGAAGCCTTGAAAAGTTACAAAGAATTGGTGAAGGAAGATCCAAGTGACTTTAGGCCTTACTTCTGTCAAGGAATGATCTACAGCTTGCTTGATAAGAATATAGAGGCCAAACAGCAATTTGCCAAATACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTATCTAAGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAGAACTAA

mRNA sequence

ATGAGCTCCACATTTGCTTCCATCTCTTCACCTTCTTCTTCATCTTTTTCATCCATCTTCAATTTCAATCCATCTAATTCTAAAATGGTCTCATTCTCGAACAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAGTTCCGTTTCTGTGCATCCGTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCGTTCCCAGGACCCACCACCCTGTTGTTCATTGTCTCCGCAACTACGCCAAAGCTGCGATTCTCATTGGTGCTGCCGCCACCATGGTTGGGAAGTTCTCGAATTTGCCTGCCAGAGCTGAATCGTCTGCGGTGGTGGCTGAGGAAGCTTCAAGAGTGGAGGAAACCACCTCCGATCATCGGATTTTTGAGGATTCAGACCAGGACGGGAGGCAATCCTCGCCGTTAAATGACTTTCTCGAATCGAATTCTGAGGCTGTCGAGGCCCTCAAATCTCTCCTACAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCGCTAAAAATTTTGAAGCAATTGGTATCTGCTCTGCCGTCAGTGACTGAGTGGAAATTTCTGATGGCTAGGTTGCTTGGGGAAATGGGCAAAACGGAACATGCAAGAGAAGTTTTTGAAGAGATTTTGGCTGTCAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAAGCTGTGATTCGGCGATTGGAAGAAGCTTTGAGAATCGCTGAGAACGAAAACAAAGCTAAGGAAGCCAGAGATGTGAAGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTTGAGGAAGCCTTGAAAAGTTACAAAGAATTGGTGAAGGAAGATCCAAGTGACTTTAGGCCTTACTTCTGTCAAGGAATGATCTACAGCTTGCTTGATAAGAATATAGAGGCCAAACAGCAATTTGCCAAATACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTATCTAAGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAGAACTAA

Coding sequence (CDS)

ATGAGCTCCACATTTGCTTCCATCTCTTCACCTTCTTCTTCATCTTTTTCATCCATCTTCAATTTCAATCCATCTAATTCTAAAATGGTCTCATTCTCGAACAATCTTCGTTTTGCTGCTCCCCTTTCTCGCAGTTCCGTTTCTGTGCATCCGTTTAGGGTTAGGGCTTCCTCTGTTCCCGTTCCCGTTCCCAGGACCCACCACCCTGTTGTTCATTGTCTCCGCAACTACGCCAAAGCTGCGATTCTCATTGGTGCTGCCGCCACCATGGTTGGGAAGTTCTCGAATTTGCCTGCCAGAGCTGAATCGTCTGCGGTGGTGGCTGAGGAAGCTTCAAGAGTGGAGGAAACCACCTCCGATCATCGGATTTTTGAGGATTCAGACCAGGACGGGAGGCAATCCTCGCCGTTAAATGACTTTCTCGAATCGAATTCTGAGGCTGTCGAGGCCCTCAAATCTCTCCTACAGCAAAAGCTTGAAAATGGTGAGGATGAAGAAGCGCTAAAAATTTTGAAGCAATTGGTATCTGCTCTGCCGTCAGTGACTGAGTGGAAATTTCTGATGGCTAGGTTGCTTGGGGAAATGGGCAAAACGGAACATGCAAGAGAAGTTTTTGAAGAGATTTTGGCTGTCAATCCATTGTCTTTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAAGCTGTGATTCGGCGATTGGAAGAAGCTTTGAGAATCGCTGAGAACGAAAACAAAGCTAAGGAAGCCAGAGATGTGAAGTTGATAATGGCTCAAATACAATTCTTGCAGAAGAATGTTGAGGAAGCCTTGAAAAGTTACAAAGAATTGGTGAAGGAAGATCCAAGTGACTTTAGGCCTTACTTCTGTCAAGGAATGATCTACAGCTTGCTTGATAAGAATATAGAGGCCAAACAGCAATTTGCCAAATACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTATCTAAGAACTCCATTGTCAAGGATGAAAATCTTTGGATCAGATGAGAACTAA

Protein sequence

MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Homology
[Close]
BLAST of CsGy5G012260 vs. NCBI nr
Match: XP_004149472.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 642.9 bits (1657), Expect = 6.3e-181
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0 

Query: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60
           MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120
           VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
           HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240
           VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 346
           SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]
BLAST of CsGy5G012260 vs. NCBI nr
Match: KGN49762.1 (hypothetical protein Csa_5G114590 [Cucumis sativus])

HSP 1 Score: 599.7 bits (1545), Expect = 6.1e-168
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 

Query: 29  MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA 88
           MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA
Sbjct: 1   MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA 60

Query: 89  TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV 148
           TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV
Sbjct: 61  TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV 120

Query: 149 EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI 208
           EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI
Sbjct: 121 EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI 180

Query: 209 LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL 268
           LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL
Sbjct: 181 LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL 240

Query: 269 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG 328
           QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG
Sbjct: 241 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG 300

Query: 329 YLRTPLSRMKIFGSDEN 346
           YLRTPLSRMKIFGSDEN
Sbjct: 301 YLRTPLSRMKIFGSDEN 317

[Close]
BLAST of CsGy5G012260 vs. NCBI nr
Match: XP_008466719.1 (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo])

HSP 1 Score: 595.9 bits (1535), Expect = 8.8e-167
Identity = 323/345 (93.62%), Postives = 331/345 (95.94%), Query Frame = 0 

Query: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60
           MSSTFAS+SSPSSSS SSIFNFNPSNSKMVSFSNNLRFAAPLSR S+SVHPFRVRASS  
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASS-- 60

Query: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120
           VPVPRTHHPVV CLRNYAKAAILIGAAATMVGKFSNLPARAE+ A VAEEASR+EETT D
Sbjct: 61  VPVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPD 120

Query: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
            RI EDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS
Sbjct: 121 KRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240
           VTEWKFLMARLL EMGKTE+AREVFEEILAV+PLS+EALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLE 240

Query: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAE E KAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY
Sbjct: 241 EALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 346
           SLLDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]
BLAST of CsGy5G012260 vs. NCBI nr
Match: XP_022146470.1 (protein SLOW GREEN 1, chloroplastic [Momordica charantia])

HSP 1 Score: 537.3 bits (1383), Expect = 3.7e-149
Identity = 296/344 (86.05%), Postives = 318/344 (92.44%), Query Frame = 0 

Query: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60
           MSSTFA++SSPSSSS SSIF+FN S  K VS   NLRFAAPLSR+SV V  FRVRASS P
Sbjct: 1   MSSTFAAMSSPSSSSLSSIFHFNASKPKPVS-PPNLRFAAPLSRNSVYVQRFRVRASSAP 60

Query: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120
           +P    +HPVV CLRNYA+AAILIGAAATMVGKFS+LPARAES A VAEEASR+EE   D
Sbjct: 61  LPDASRNHPVVQCLRNYARAAILIGAAATMVGKFSHLPARAESPAAVAEEASRMEE---D 120

Query: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
            ++ EDSD+D +QSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSA PS
Sbjct: 121 RQVVEDSDRDRQQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSAQPS 180

Query: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240
           VTEWKFLMARLLGEMGKTE+AR+VFEEILAVNPLSFEALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLGEMGKTENARDVFEEILAVNPLSFEALFENALLMDRCGEGEAVLRRLE 240

Query: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAE+ENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDP+DFRPYFCQGMIY
Sbjct: 241 EALRIAEDENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPNDFRPYFCQGMIY 300

Query: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 345
           SLLDKN+EA++QF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDE
Sbjct: 301 SLLDKNVEAREQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 340

[Close]
BLAST of CsGy5G012260 vs. NCBI nr
Match: XP_022956910.1 (protein SLOW GREEN 1, chloroplastic [Cucurbita moschata] >XP_022956918.1 protein SLOW GREEN 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 508.8 bits (1309), Expect = 1.4e-140
Identity = 289/345 (83.77%), Postives = 306/345 (88.70%), Query Frame = 0 

Query: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60
           MS TFAS+SSPSSSS SSI  F  S SK V    NLRFAAP+SR+SVSVH FRVRASSVP
Sbjct: 1   MSFTFASMSSPSSSSLSSI--FISSKSKPVP-PPNLRFAAPISRTSVSVHRFRVRASSVP 60

Query: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120
           V     +HPVV C +NYA+AAILIGAAATMVGKFS+LPARAES  VV EEASR+EE   +
Sbjct: 61  V---SRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVVVEEEASRIEE---E 120

Query: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
            RI EDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSA  S
Sbjct: 121 QRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSS 180

Query: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240
           VTEWKFL ARLLGEMGKTE+AREVFEEILA NPLSFEALFENALLMDRCGEGEAV+ RLE
Sbjct: 181 VTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLE 240

Query: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           +ALRIAENE KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+KEDPSDFRPYFCQGMIY
Sbjct: 241 QALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELIKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 346
           SLLDKN EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 336

[Close]
BLAST of CsGy5G012260 vs. TAIR10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein)

HSP 1 Score: 211.8 bits (538), Expect = 6.5e-55
Identity = 128/270 (47.41%), Postives = 156/270 (57.78%), Query Frame = 0 

Query: 75  RNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQS 134
           +++AK+AILIGAA +M GKFS LP +AES             TT +    E  ++   + 
Sbjct: 56  KSFAKSAILIGAAVSMTGKFSTLPVKAESPV-----------TTIEKTYEEVKEEKLSEI 115

Query: 135 SPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGE 194
           +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+                        
Sbjct: 116 TPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLXXXXXXXXXXXXXXXXXXXXXXXX 175

Query: 195 MGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKE 254
                                                          AL +AE E   KE
Sbjct: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVAEAEYLVKE 235

Query: 255 ARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFA 314
           ARDV+LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKN+EAK+QFA
Sbjct: 236 ARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFA 295

Query: 315 KYRELSPKKFEVDGYLRTPLSRMKIFGSDE 345
           KYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 296 KYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of CsGy5G012260 vs. TAIR10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 9.1e-33
Identity = 89/256 (34.77%), Postives = 143/256 (55.86%), Query Frame = 0 

Query: 86  AAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNS 145
           AAA  +      P+ A ++ V A       + ++ +  FE+ ++       L ++L S+ 
Sbjct: 74  AAALFLVNLQLKPSPAIAAPVAATPLMESLKQSNGNVSFEEEERS------LEEYLASHP 133

Query: 146 EAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVF 205
           + VEAL+SL++ ++++ +  EA++++ +L+   P   EW  L A +    G  E A+  F
Sbjct: 134 DDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYSGDLESAKTGF 193

Query: 206 EEILAVNPLSFEALFENALLMDRCGEG-EAVIRRLEEALRIAENENKAKEARDVKLIMAQ 265
           EEIL  +PL  EA     +     G+   AV +R+EEA+   + E   K+ RD KL++AQ
Sbjct: 194 EEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKNRKDLRDFKLLVAQ 253

Query: 266 IQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKF 325
           I+ ++    EALK Y+ELVKE+P DFRPY CQG+IY++L K  EA++QF K+R L PK  
Sbjct: 254 IRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAEKQFEKFRRLVPKNH 313

Query: 326 EVDGYLRTPLSRMKIF 341
               Y    +   K+F
Sbjct: 314 PYREYFMDNMVASKLF 323

[Close]
BLAST of CsGy5G012260 vs. TAIR10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 2.6e-32
Identity = 84/252 (33.33%), Postives = 142/252 (56.35%), Query Frame = 0 

Query: 79  KAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLN 138
           KAAIL+  +   +G  S+ PA A  +A V  +A        D ++FE             
Sbjct: 82  KAAILLVGSFVFLGFCSSKPALALPTATVVSQAE-----LEDEKMFE------------- 141

Query: 139 DFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKT 198
             LE+  E +EA+K+++ +K+  G++E+A+K +++L+   P   EWK L A     MG+ 
Sbjct: 142 KLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGEL 201

Query: 199 EHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDV 258
             A+ ++++IL   PL   AL   A++M +  +  +V   L EA+ +A   N+  E R++
Sbjct: 202 SKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQGNRVTEERNI 261

Query: 259 KLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRE 318
           ++++ Q+  ++   EE LK ++++V ++P DFRPY CQG++YSL+DK  EA QQF  Y  
Sbjct: 262 QVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWS 314

Query: 319 LSPKKFEVDGYL 331
           L P +F   G+L
Sbjct: 322 LVPGEFPQKGFL 314

[Close]
BLAST of CsGy5G012260 vs. TAIR10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-30
Identity = 97/312 (31.09%), Postives = 164/312 (52.56%), Query Frame = 0 

Query: 32  FSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMV 91
           F ++++  + L  +S+     + + S  P+P            R +    I +  AA ++
Sbjct: 31  FKSSIQPISSLKSASIKASSSKFQNSITPLPKSTP-------FRLFKSTCITLTTAAALL 90

Query: 92  GKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEAL 151
              +NL    +S A+ A  A      + ++   E+ ++       L++ L ++   V+AL
Sbjct: 91  --LANL--HLKSPAIAAPIAPPPSVESKENVTLEEEER------ALDEHLITHPSDVDAL 150

Query: 152 KSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAV 211
           +SL++ K+++ +  EA++++ +L+   P   EW  L A +    G  + A+  FEEILA 
Sbjct: 151 RSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTGFEEILAK 210

Query: 212 NPLSFEALFENALLMDRCGEG---EAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL 271
           +PL  EA   + LLM     G   + V  R+EEA+   + EN   + RD KL++AQI+ +
Sbjct: 211 DPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKCKKENNQNDFRDFKLLVAQIRVI 270

Query: 272 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG 331
           +    EALK Y+ELVKE+P DFRPY CQG+IY+LL K  +A++QF  +R+L PK      
Sbjct: 271 EGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKKDKAEEQFDNFRKLVPKNHPYRE 323

Query: 332 YLRTPLSRMKIF 341
           Y    +   K+F
Sbjct: 331 YFMDNMIATKLF 323

[Close]
BLAST of CsGy5G012260 vs. TAIR10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 2.7e-29
Identity = 81/213 (38.03%), Postives = 126/213 (59.15%), Query Frame = 0 

Query: 137 LNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMG 196
           L   L  N   VEAL+SL++ K +    + AL+IL +L+   P   EW+ L A++    G
Sbjct: 118 LEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGG 177

Query: 197 KTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEA----VIRRLEEALRIAENENKA 256
             + A + FEE+L+ +P   EA   + L+M    E E+    +  R+ EA+   + ENK 
Sbjct: 178 DFDSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESESKLSEIESRINEAIEKCKKENK- 237

Query: 257 KEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQ 316
           K+ RD  L++AQI+ ++ N  EAL+ Y+ELVK++P DFRPY CQG+IY+L+ K  EA++Q
Sbjct: 238 KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQ 297

Query: 317 FAKYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 345
           FA++R L P+      YL    L+  K+F  ++
Sbjct: 298 FAEFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

[Close]
BLAST of CsGy5G012260 vs. Swiss-Prot
Match: sp|Q9LS48|SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.2e-53
Identity = 128/270 (47.41%), Postives = 156/270 (57.78%), Query Frame = 0 

Query: 75  RNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQS 134
           +++AK+AILIGAA +M GKFS LP +AES             TT +    E  ++   + 
Sbjct: 56  KSFAKSAILIGAAVSMTGKFSTLPVKAESPV-----------TTIEKTYEEVKEEKLSEI 115

Query: 135 SPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGE 194
           +PL++ L+S  EAVE L+SLLQQKLE GEDEEALK+                        
Sbjct: 116 TPLSELLDSTPEAVETLRSLLQQKLEKGEDEEALKLXXXXXXXXXXXXXXXXXXXXXXXX 175

Query: 195 MGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKE 254
                                                          AL +AE E   KE
Sbjct: 176 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVAEAEYLVKE 235

Query: 255 ARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFA 314
           ARDV+LI+AQI FLQKNV+EALKSY++L KEDP DFRPYFC+GMIYSLLDKN+EAK+QFA
Sbjct: 236 ARDVRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFA 295

Query: 315 KYRELSPKKFEVDGYLRTPLSRMKIFGSDE 345
           KYRELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 296 KYRELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]
BLAST of CsGy5G012260 vs. TrEMBL
Match: tr|A0A0A0KMW6|A0A0A0KMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 599.7 bits (1545), Expect = 4.0e-168
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0 

Query: 29  MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA 88
           MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA
Sbjct: 1   MVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAA 60

Query: 89  TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV 148
           TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV
Sbjct: 61  TMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAV 120

Query: 149 EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI 208
           EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI
Sbjct: 121 EALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEI 180

Query: 209 LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL 268
           LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL
Sbjct: 181 LAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFL 240

Query: 269 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG 328
           QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG
Sbjct: 241 QKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDG 300

Query: 329 YLRTPLSRMKIFGSDEN 346
           YLRTPLSRMKIFGSDEN
Sbjct: 301 YLRTPLSRMKIFGSDEN 317

[Close]
BLAST of CsGy5G012260 vs. TrEMBL
Match: tr|A0A1S3CRV7|A0A1S3CRV7_CUCME (protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 5.8e-167
Identity = 323/345 (93.62%), Postives = 331/345 (95.94%), Query Frame = 0 

Query: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60
           MSSTFAS+SSPSSSS SSIFNFNPSNSKMVSFSNNLRFAAPLSR S+SVHPFRVRASS  
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASS-- 60

Query: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120
           VPVPRTHHPVV CLRNYAKAAILIGAAATMVGKFSNLPARAE+ A VAEEASR+EETT D
Sbjct: 61  VPVPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPD 120

Query: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180
            RI EDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS
Sbjct: 121 KRIVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240
           VTEWKFLMARLL EMGKTE+AREVFEEILAV+PLS+EALFENALLMDRCGEGEAV+RRLE
Sbjct: 181 VTEWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLE 240

Query: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300
           EALRIAE E KAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY
Sbjct: 241 EALRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 346
           SLLDKN EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]
BLAST of CsGy5G012260 vs. TrEMBL
Match: tr|B9HVN0|B9HVN0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G098500v3 PE=4 SV=2)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 193/277 (69.68%), Postives = 224/277 (80.87%), Query Frame = 0 

Query: 68  HPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDS 127
           +P+   L+   K AILIG  A+M GKF  LPA+AE+ A + E+   +EE        ++ 
Sbjct: 61  NPLTQTLKTLTKTAILIGVTASMAGKFPVLPAKAENPAALTEQNPTLEEEEEGMEKHQNQ 120

Query: 128 DQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFL 187
           +Q    S+PL  FLESN+EA+E+LKSLLQQKLE G+D+EAL ILKQLVSA P VTEWKFL
Sbjct: 121 NQSD-ASTPLEAFLESNAEAIESLKSLLQQKLEKGQDDEALNILKQLVSAQPEVTEWKFL 180

Query: 188 MARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAE 247
           MARLL EM + + AR VFEEIL VNPLSFEALFENALLM+R GEG+AVIRRL EAL IAE
Sbjct: 181 MARLLNEMRRVQDARNVFEEILVVNPLSFEALFENALLMERSGEGDAVIRRLREALDIAE 240

Query: 248 NENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNI 307
            ENK KEARDV+LIMAQIQFLQKNVEEAL+SY+EL  EDP DFRPYFC+GMIYSLLD+N 
Sbjct: 241 EENKVKEARDVRLIMAQIQFLQKNVEEALESYQELSNEDPKDFRPYFCRGMIYSLLDRNE 300

Query: 308 EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 345
           EAK+QFAKYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 301 EAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 336

[Close]
BLAST of CsGy5G012260 vs. TrEMBL
Match: tr|A0A2K1ZH54|A0A2K1ZH54_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.8e-95
Identity = 207/337 (61.42%), Postives = 245/337 (72.70%), Query Frame = 0 

Query: 8   ISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTH 67
           ++S  ++SF  +   +  NS     S  L+F    S  S+ +      +SS       + 
Sbjct: 1   MNSTLAASFIHLKTPSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHT----SK 60

Query: 68  HPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSDHRIFEDS 127
            P+   L+   K AILIG AA++ GKF  LPA+AE+ A + E+   +E         +  
Sbjct: 61  SPLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEXXXXXXXXXD-- 120

Query: 128 DQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFL 187
                 S+PL  FLESN+EA+E+LKSLLQQKLENG+DEEALKI+K LVSA P VTEWKFL
Sbjct: 121 -----PSTPLQAFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKFL 180

Query: 188 MARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRIAE 247
           MARLL E G+ + AR VFEEIL  NPLSFEALFENALLMDRCGEGEAVIRRL+ AL IAE
Sbjct: 181 MARLLNETGRAQDARNVFEEILVANPLSFEALFENALLMDRCGEGEAVIRRLQGALDIAE 240

Query: 248 NENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNI 307
            ENK KEARDV+LIMAQIQFLQKNVEEALKSY+EL KEDP DFRPYFC+GMIYSLLD+N 
Sbjct: 241 EENKVKEARDVRLIMAQIQFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDRNE 300

Query: 308 EAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 345
           EAK+QFAKYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 301 EAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 326

[Close]
BLAST of CsGy5G012260 vs. TrEMBL
Match: tr|A0A2K1ZH53|A0A2K1ZH53_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.3e-94
Identity = 208/339 (61.36%), Postives = 245/339 (72.27%), Query Frame = 0 

Query: 8   ISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTH 67
           ++S  ++SF  +   +  NS     S  L+F    S  S+ +      +SS       + 
Sbjct: 1   MNSTLAASFIHLKTPSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHT----SK 60

Query: 68  HPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEE--TTSDHRIFE 127
            P+   L+   K AILIG AA++ GKF  LPA+AE+ A + E+   +EE           
Sbjct: 61  SPLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEEXXXXXXXXXXX 120

Query: 128 DSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWK 187
                   S+PL  FLESN+EA+E+LKSLLQQKLENG+DEEALKI+K LVSA P VTEWK
Sbjct: 121 XXXXXXXPSTPLQAFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWK 180

Query: 188 FLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLEEALRI 247
           FLMARLL E G+ + AR VFEEIL  NPLSFEALFENALLMDRCGEGEAVIRRL+ AL I
Sbjct: 181 FLMARLLNETGRAQDARNVFEEILVANPLSFEALFENALLMDRCGEGEAVIRRLQGALDI 240

Query: 248 AENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSLLDK 307
           AE ENK KEARDV+LIMAQIQFLQKNVEEALKSY+EL KEDP DFRPYFC+GMIYSLLD+
Sbjct: 241 AEEENKVKEARDVRLIMAQIQFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDR 300

Query: 308 NIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 345
           N EAK+QFAKYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 301 NEEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 335

The following BLAST results are available for this feature:
BLAST of CsGy5G012260 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149472.16.3e-181100.00PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus][more]
KGN49762.16.1e-168100.00hypothetical protein Csa_5G114590 [Cucumis sativus][more]
XP_008466719.18.8e-16793.62PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis melo][more]
XP_022146470.13.7e-14986.05protein SLOW GREEN 1, chloroplastic [Momordica charantia][more]
XP_022956910.11.4e-14083.77protein SLOW GREEN 1, chloroplastic [Cucurbita moschata] >XP_022956918.1 protein... [more]
BLAST of CsGy5G012260 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18420.16.5e-5547.41Protein prenylyltransferase superfamily protein[more]
AT2G37400.19.1e-3334.77Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G39470.12.6e-3233.33Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G53560.17.2e-3031.09Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G02590.12.7e-2938.03Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of CsGy5G012260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LS48|SG1_ARATH1.2e-5347.41protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ... [more]
BLAST of CsGy5G012260 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KMW6|A0A0A0KMW6_CUCSA4.0e-168100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G114590 PE=4 SV=1[more]
tr|A0A1S3CRV7|A0A1S3CRV7_CUCME5.8e-16793.62protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504062 PE=4... [more]
tr|B9HVN0|B9HVN0_POPTR2.0e-9569.68Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_010G098500v3 PE=... [more]
tr|A0A2K1ZH54|A0A2K1ZH54_POPTR7.8e-9561.42Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=... [more]
tr|A0A2K1ZH53|A0A2K1ZH53_POPTR2.3e-9461.36Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G143600v3 PE=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0008150 biological_process
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy5G012260.1CsGy5G012260.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availableCOILSCoilCoilcoord: 265..285
NoneNo IPR availableCOILSCoilCoilcoord: 229..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..129
NoneNo IPR availablePANTHERPTHR26312:SF70PROTEIN SLOW GREEN 1, CHLOROPLASTICcoord: 28..344
NoneNo IPR availablePANTHERPTHR26312FAMILY NOT NAMEDcoord: 28..344
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 182..215
e-value: 60.0
score: 8.1
coord: 290..323
e-value: 160.0
score: 4.4
coord: 256..289
e-value: 3.2
score: 16.7
IPR019734Tetratricopeptide repeatPFAMPF13174TPR_6coord: 260..288
e-value: 0.041
score: 14.4
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 290..323
score: 6.549
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 216..249
score: 5.222
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 148..181
score: 5.93
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 256..289
score: 8.083
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 182..215
score: 7.464
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 75..257
e-value: 2.7E-13
score: 51.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 258..327
e-value: 1.5E-9
score: 39.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 142..323
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 148..323
score: 22.364