Cp4.1LG01g18860 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g18860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Tetratricopeptide repeat (TPR)-like superfamily protein
Location	Cp4.1LG01 : 16113783 .. 16114793 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTTCACATTTGCTTCCATGTCTTCACCCTCTTCTTCTTCTCTTTCATCTATCTTTATTTCTTCTAAATCGAAACCAGTTCCACCCCCGAATCTCCGCTTCGTCGCTCCCCTTTCTCGCACTTCTGTTTCTTTGCATCGTTTTAGGGTTAGGGCTTCGTCTGTTCCCGTTTCCAGGAACCACCCTGTTGTTCAATGCTTCAAGAACTACGCCAGAGCTGCGATTCTCATTGGTGCTGCCGCTACCATGGTTGGGAAATTTTCGCATTTGCCTGCCAGAGCGGAGTCGCCGGTGGCTGTAGAGGAGGAAGCTTCGAGAATGGAAGAAGAACAGCGGATTGTTGAGGACTCGGACCAAGACGGGCAGCAATCCTCACCGTTGAATGATTTTCTCGAATCGAATTCTGAAGCTGTTGAGGCTCTTAAATCGCTCCTGCAGCAGAAACTTGAAAATAGCGAGGATGAAGAAGCGCTGAAAATCTTGAATCAATTGGTATCTGCTCAGTCGTCGGTGACCGAGTGGAAATTTCTCAAGGCCAGATTGCTCGGCGAAATGGGCAAAACGGAAAATGCACGAGAAGTTTTCGAAGAGATTTTGGCTGAGAATCCGTTGTCATTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCAGTGCTCCTGCGCTTAGAACGGGCTTTGAGAATTGCTGAAAACGAAAAGAAGGCGAAGGAGGCCAGGGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGGGGCCTTGACGAGTTACAAAGAATTGATCAATGAGGATCCTAGCGACTTTAGGCCATACTTCTGTCAAGGAATGATCTACAGCTTGCTTGACAAGAACGAGGAAGCCAGACAGCAATTCAGCAAGTACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTACCTACGGACTCCATTGTCAAGGATGAAAATCTTCGGATCAGATGAGAACTAA

mRNA sequence

ATGAGCTTCACATTTGCTTCCATGTCTTCACCCTCTTCTTCTTCTCTTTCATCTATCTTTATTTCTTCTAAATCGAAACCAGTTCCACCCCCGAATCTCCGCTTCGTCGCTCCCCTTTCTCGCACTTCTGTTTCTTTGCATCGTTTTAGGGTTAGGGCTTCGTCTGTTCCCGTTTCCAGGAACCACCCTGTTGTTCAATGCTTCAAGAACTACGCCAGAGCTGCGATTCTCATTGGTGCTGCCGCTACCATGGTTGGGAAATTTTCGCATTTGCCTGCCAGAGCGGAGTCGCCGGTGGCTGTAGAGGAGGAAGCTTCGAGAATGGAAGAAGAACAGCGGATTGTTGAGGACTCGGACCAAGACGGGCAGCAATCCTCACCGTTGAATGATTTTCTCGAATCGAATTCTGAAGCTGTTGAGGCTCTTAAATCGCTCCTGCAGCAGAAACTTGAAAATAGCGAGGATGAAGAAGCGCTGAAAATCTTGAATCAATTGGTATCTGCTCAGTCGTCGGTGACCGAGTGGAAATTTCTCAAGGCCAGATTGCTCGGCGAAATGGGCAAAACGGAAAATGCACGAGAAGTTTTCGAAGAGATTTTGGCTGAGAATCCGTTGTCATTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCAGTGCTCCTGCGCTTAGAACGGGCTTTGAGAATTGCTGAAAACGAAAAGAAGGCGAAGGAGGCCAGGGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGGGGCCTTGACGAGTTACAAAGAATTGATCAATGAGGATCCTAGCGACTTTAGGCCATACTTCTGTCAAGGAATGATCTACAGCTTGCTTGACAAGAACGAGGAAGCCAGACAGCAATTCAGCAAGTACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTACCTACGGACTCCATTGTCAAGGATGAAAATCTTCGGATCAGATGAGAACTAA

Coding sequence (CDS)

ATGAGCTTCACATTTGCTTCCATGTCTTCACCCTCTTCTTCTTCTCTTTCATCTATCTTTATTTCTTCTAAATCGAAACCAGTTCCACCCCCGAATCTCCGCTTCGTCGCTCCCCTTTCTCGCACTTCTGTTTCTTTGCATCGTTTTAGGGTTAGGGCTTCGTCTGTTCCCGTTTCCAGGAACCACCCTGTTGTTCAATGCTTCAAGAACTACGCCAGAGCTGCGATTCTCATTGGTGCTGCCGCTACCATGGTTGGGAAATTTTCGCATTTGCCTGCCAGAGCGGAGTCGCCGGTGGCTGTAGAGGAGGAAGCTTCGAGAATGGAAGAAGAACAGCGGATTGTTGAGGACTCGGACCAAGACGGGCAGCAATCCTCACCGTTGAATGATTTTCTCGAATCGAATTCTGAAGCTGTTGAGGCTCTTAAATCGCTCCTGCAGCAGAAACTTGAAAATAGCGAGGATGAAGAAGCGCTGAAAATCTTGAATCAATTGGTATCTGCTCAGTCGTCGGTGACCGAGTGGAAATTTCTCAAGGCCAGATTGCTCGGCGAAATGGGCAAAACGGAAAATGCACGAGAAGTTTTCGAAGAGATTTTGGCTGAGAATCCGTTGTCATTCGAAGCATTGTTTGAAAACGCATTGTTAATGGATCGTTGTGGGGAAGGGGAGGCAGTGCTCCTGCGCTTAGAACGGGCTTTGAGAATTGCTGAAAACGAAAAGAAGGCGAAGGAGGCCAGGGATGTGAGGTTGATAATGGCTCAAATACAGTTCTTGCAGAAGAATGTAGAGGGGGCCTTGACGAGTTACAAAGAATTGATCAATGAGGATCCTAGCGACTTTAGGCCATACTTCTGTCAAGGAATGATCTACAGCTTGCTTGACAAGAACGAGGAAGCCAGACAGCAATTCAGCAAGTACAGGGAGCTCTCACCAAAGAAATTTGAGGTTGATGGGTACCTACGGACTCCATTGTCAAGGATGAAAATCTTCGGATCAGATGAGAACTAA

Protein sequence

MSFTFASMSSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSVPVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN

Homology

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BLAST of Cp4.1LG01g18860 vs. Swiss-Prot
Match: SG1_ARATH (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.4e-93
Identity = 199/327 (60.86%), Postives = 241/327 (73.70%), Query Frame = 1


Query: 9   SSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSVPVSRNHPVVQCF 68
           S  +SSSL S F++ K+ PV  P +     LS         R+RASS   S  +   + F
Sbjct: 4   SLSASSSLVSSFVAVKATPVTGPLIPRRDLLS--------IRIRASSNQNSSGYCFPEKF 63

Query: 69  KNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPL 128
           K++A++AILIGAA +M GKFS LP +AESPV   E+     +E+++ E         +PL
Sbjct: 64  KSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSE--------ITPL 123

Query: 129 NDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGK 188
           ++ L+S  EAVE L+SLLQQKLE  EDEEALK+L +LV+AQ   TEWKFL ARLLGEMG+
Sbjct: 124 SELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGR 183

Query: 189 TENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARD 248
            ENAR++FEEIL  NPLSFEALFENALLMDR GEG AVL RLE AL +AE E   KEARD
Sbjct: 184 PENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARD 243

Query: 249 VRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYR 308
           VRLI+AQI FLQKNV+ AL SY++L  EDP DFRPYFC+GMIYSLLDKN EA++QF+KYR
Sbjct: 244 VRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYR 303

Query: 309 ELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           ELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 304 ELSPKKFEVEGYLRTPLSKMKLFGGSE 314

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BLAST of Cp4.1LG01g18860 vs. TrEMBL
Match: A0A0A0KMW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114590 PE=4 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 1.2e-134
Identity = 265/311 (85.21%), Postives = 280/311 (90.03%), Query Frame = 1


Query: 32  NLRFVAPLSRTSVSLHRFRVRASSVPVS---RNHPVVQCFKNYARAAILIGAAATMVGKF 91
           NLRF APLSR+SVS+H FRVRASSVPV     +HPVV C +NYA+AAILIGAAATMVGKF
Sbjct: 7   NLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKF 66

Query: 92  SHLPARAESPVAVEEEASRMEE---EQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSL 151
           S+LPARAES   V EEASR+EE   + RI EDSDQDG+QSSPLNDFLESNSEAVEALKSL
Sbjct: 67  SNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSL 126

Query: 152 LQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENAREVFEEILAENPL 211
           LQQKLEN EDEEALKIL QLVSA  SVTEWKFL ARLLGEMGKTE+AREVFEEILA NPL
Sbjct: 127 LQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAVNPL 186

Query: 212 SFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARDVRLIMAQIQFLQKNVEG 271
           SFEALFENALLMDRCGEGEAV+ RLE ALRIAENE KAKEARDV+LIMAQIQFLQKNVE 
Sbjct: 187 SFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQKNVEE 246

Query: 272 ALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPL 331
           AL SYKEL+ EDPSDFRPYFCQGMIYSLLDKN EA+QQF+KYRELSPKKFEVDGYLRTPL
Sbjct: 247 ALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPL 306

Query: 332 SRMKIFGSDEN 337
           SRMKIFGSDEN
Sbjct: 307 SRMKIFGSDEN 317

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BLAST of Cp4.1LG01g18860 vs. TrEMBL
Match: A0A061E9A2_THECC (Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_011097 PE=4 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 8.5e-101
Identity = 219/346 (63.29%), Postives = 263/346 (76.01%), Query Frame = 1


Query: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSV---- 60
           M+ T A +S+PS S L    +SS +       L F AP          FR+RASS     
Sbjct: 1   MNPTLAKLSAPSPSFLHLKSLSSSTSSAS--FLAFPAPKP--------FRLRASSAKSDS 60

Query: 61  -----PVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAES-PVAVEEEASRMEE 120
                P     P+ Q  + +A+ AIL+GA A M+GKFSH PA+AES P   E+E S +EE
Sbjct: 61  FPSSNPNKHTQPLTQKLQCFAKTAILLGATALMIGKFSHFPAKAESPPTMTEQETSGLEE 120

Query: 121 EQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQS 180
            ++  ED+ Q+ +Q+SPL++FL SN+EA+EALK LL+QKLEN EDEEAL ILN+LVSAQ 
Sbjct: 121 GEQQEEDA-QNPEQTSPLSEFLGSNNEAIEALKYLLEQKLENGEDEEALTILNRLVSAQP 180

Query: 181 SVTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRL 240
            VT+WKFL ARLL EMG+TENAR+VFEEIL  NPLSFEALFENALLMDRCGEGEAV+ RL
Sbjct: 181 QVTDWKFLLARLLSEMGQTENARKVFEEILRTNPLSFEALFENALLMDRCGEGEAVIKRL 240

Query: 241 ERALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMI 300
           E AL IA++EKK KEARDVRLIMAQIQFLQKNVE AL SY++L  EDPSDFRPYFCQGMI
Sbjct: 241 EEALTIAQDEKKVKEARDVRLIMAQIQFLQKNVEEALRSYQQLAKEDPSDFRPYFCQGMI 300

Query: 301 YSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           YSLLD+N EA++QF+KYRELSPKKFEV+GYLRT LSRMK+FG++E+
Sbjct: 301 YSLLDRNAEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGTNES 335

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BLAST of Cp4.1LG01g18860 vs. TrEMBL
Match: B9HJP0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14270g PE=4 SV=2)

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95
Identity = 202/333 (60.66%), Postives = 246/333 (73.87%), Query Frame = 1


Query: 13  SSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHR------FRVRASSVPVSRNH---- 72
           +S+L++ FI  K+    P +    +PL  T++  H        ++  ++   S NH    
Sbjct: 2   NSTLAASFIHLKT----PSSFNSPSPLHSTTLKFHNSTSTPSLKIPKAAASSSSNHTSKS 61

Query: 73  PVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDG 132
           P+ Q  K   + AILIG AA++ GKF  LPA+AE+P A+ E+   +EEE    E+ +   
Sbjct: 62  PLTQKLKTLTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEEE----EEEENQS 121

Query: 133 QQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARL 192
             S+PL  FLESN+EA+E+LKSLLQQKLEN +DEEALKI+  LVSAQ  VTEWKFL ARL
Sbjct: 122 DPSTPLQAFLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKFLMARL 181

Query: 193 LGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENEKK 252
           L E G+ ++AR VFEEIL  NPLSFEALFENALLMDRCGEGEAV+ RL+ AL IAE E K
Sbjct: 182 LNETGRAQDARNVFEEILVANPLSFEALFENALLMDRCGEGEAVIRRLQGALDIAEEENK 241

Query: 253 AKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQ 312
            KEARDVRLIMAQI FLQKNVE AL SY+EL  EDP DFRPYFC+GMIYSLLD+NEEA++
Sbjct: 242 VKEARDVRLIMAQIHFLQKNVEEALKSYQELSKEDPEDFRPYFCRGMIYSLLDRNEEAKE 301

Query: 313 QFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           QF+KYRELSPKKFEV+GYLRT LSRMK+FGS+E
Sbjct: 302 QFAKYRELSPKKFEVEGYLRTSLSRMKLFGSNE 326

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BLAST of Cp4.1LG01g18860 vs. TrEMBL
Match: B9RY34_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0814120 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.4e-95
Identity = 203/331 (61.33%), Postives = 250/331 (75.53%), Query Frame = 1


Query: 12  SSSSLSSIFISSKSKPVPPPNLRFVAPL-----SRTSV-SLHRFRVRASSVPVSRNH-PV 71
           +SS+L++ F+  K+    PP+L     L     + T + SL + R  +   P   +  P+
Sbjct: 2   NSSTLATSFLHLKAPSFNPPSLLQFPSLKPHCHNHTCIPSLKQIRASSDHTPNGTHKLPI 61

Query: 72  VQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQ 131
           +Q  K   +AAILIG  A+   +FS LPA+AE+   V E+   ++EE+   E+S  +  Q
Sbjct: 62  LQSLKIITKAAILIGVTASSASRFSILPAKAETSATVTEQTPTLQEEE---EESQAENNQ 121

Query: 132 SSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLG 191
           +  L++FLESN+EA+E+LKSLLQQKLEN EDEEALK LN LV AQ  VTEWKFL ARLL 
Sbjct: 122 NQNLSEFLESNAEAIESLKSLLQQKLENGEDEEALKTLNHLVEAQPLVTEWKFLMARLLN 181

Query: 192 EMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAK 251
           EMG+T++AR +FEEIL  NPLSFEALFENALLMDRCGEG+AV+ RL+ AL IAE E K K
Sbjct: 182 EMGRTQDARNLFEEILQMNPLSFEALFENALLMDRCGEGDAVIRRLQEALDIAEEENKVK 241

Query: 252 EARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQF 311
           EARDV+LIMAQIQFLQKNVE AL SY+EL  EDPSDFRPYFCQGMIYSLLD+NEEAR+QF
Sbjct: 242 EARDVKLIMAQIQFLQKNVEEALKSYQELSKEDPSDFRPYFCQGMIYSLLDRNEEAREQF 301

Query: 312 SKYRELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           +KYR+LS KKFEV+GYLRTPLSRMK+FGS+E
Sbjct: 302 AKYRQLSRKKFEVEGYLRTPLSRMKVFGSNE 329

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BLAST of Cp4.1LG01g18860 vs. TrEMBL
Match: F6HG16_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01810 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.3e-93
Identity = 192/303 (63.37%), Postives = 236/303 (77.89%), Query Frame = 1


Query: 32  NLRFVAPLSRTSVSLHRFRVRASSVPVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHL 91
           N+ F  P    S S H  R+R S+   + N+P+++  K  A   +L  AA  M+GKF  L
Sbjct: 20  NVSFAFPRPSISPSYHHRRLRVSAS--ANNNPILKAIKTSAGTLVLTAAAVFMMGKFRAL 79

Query: 92  PARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLE 151
           PARAESP+ + EE++  EE+           ++SSPL++FLE NSEA+ ALKS+LQQKLE
Sbjct: 80  PARAESPMVLSEESATPEEK----------SEESSPLSEFLE-NSEALGALKSVLQQKLE 139

Query: 152 NSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALF 211
           + ED EALK+L +LVSAQ  V EWKFL ARLLGEMG+T+ AR+VFEEILA NPLSFEALF
Sbjct: 140 DGEDGEALKVLERLVSAQPEVVEWKFLMARLLGEMGETDRARDVFEEILASNPLSFEALF 199

Query: 212 ENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYK 271
            NALLMD+CGEG+AV+ RLE ALR AENE K KEARDVRLIMAQ+QFL+KNV+ AL SY+
Sbjct: 200 GNALLMDQCGEGDAVIRRLEDALRTAENENKLKEARDVRLIMAQMQFLRKNVDEALRSYE 259

Query: 272 ELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIF 331
           EL  EDPSDFRPYFC+GMIY+L D+NEEAR+QF+KYRE SPKKFEV+G+L+TPLSRMK+F
Sbjct: 260 ELEKEDPSDFRPYFCKGMIYTLQDRNEEAREQFAKYRERSPKKFEVEGFLQTPLSRMKLF 309

Query: 332 GSD 335
           G+D
Sbjct: 320 GTD 309

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BLAST of Cp4.1LG01g18860 vs. TAIR10
Match: AT3G18420.1 (AT3G18420.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 344.4 bits (882), Expect = 8.1e-95
Identity = 199/327 (60.86%), Postives = 241/327 (73.70%), Query Frame = 1


Query: 9   SSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSVPVSRNHPVVQCF 68
           S  +SSSL S F++ K+ PV  P +     LS         R+RASS   S  +   + F
Sbjct: 4   SLSASSSLVSSFVAVKATPVTGPLIPRRDLLS--------IRIRASSNQNSSGYCFPEKF 63

Query: 69  KNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPL 128
           K++A++AILIGAA +M GKFS LP +AESPV   E+     +E+++ E         +PL
Sbjct: 64  KSFAKSAILIGAAVSMTGKFSTLPVKAESPVTTIEKTYEEVKEEKLSE--------ITPL 123

Query: 129 NDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGK 188
           ++ L+S  EAVE L+SLLQQKLE  EDEEALK+L +LV+AQ   TEWKFL ARLLGEMG+
Sbjct: 124 SELLDSTPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGR 183

Query: 189 TENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARD 248
            ENAR++FEEIL  NPLSFEALFENALLMDR GEG AVL RLE AL +AE E   KEARD
Sbjct: 184 PENARQMFEEILQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARD 243

Query: 249 VRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYR 308
           VRLI+AQI FLQKNV+ AL SY++L  EDP DFRPYFC+GMIYSLLDKN EA++QF+KYR
Sbjct: 244 VRLIIAQIHFLQKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYR 303

Query: 309 ELSPKKFEVDGYLRTPLSRMKIFGSDE 336
           ELSPKKFEV+GYLRTPLS+MK+FG  E
Sbjct: 304 ELSPKKFEVEGYLRTPLSKMKLFGGSE 314

[Close]

BLAST of Cp4.1LG01g18860 vs. TAIR10
Match: AT2G37400.1 (AT2G37400.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 4.4e-32
Identity = 75/210 (35.71%), Postives = 124/210 (59.05%), Query Frame = 1


Query: 123 QQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARL 182
           ++   L ++L S+ + VEAL+SL++ ++++ +  EA++++++L+  +    EW  LKA +
Sbjct: 114 EEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANI 173

Query: 183 LGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEG-EAVLLRLERALRIAENEK 242
               G  E+A+  FEEIL ++PL  EA     +     G+   AV  R+E A+   + EK
Sbjct: 174 FSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEK 233

Query: 243 KAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEAR 302
             K+ RD +L++AQI+ ++     AL  Y+EL+ E+P DFRPY CQG+IY++L K  EA 
Sbjct: 234 NRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEAE 293

Query: 303 QQFSKYRELSPKKFEVDGYLRTPLSRMKIF 332
           +QF K+R L PK      Y    +   K+F
Sbjct: 294 KQFEKFRRLVPKNHPYREYFMDNMVASKLF 323

[Close]

BLAST of Cp4.1LG01g18860 vs. TAIR10
Match: AT4G39470.1 (AT4G39470.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 3.5e-29
Identity = 76/249 (30.52%), Postives = 138/249 (55.42%), Query Frame = 1


Query: 73  RAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPLNDFL 132
           +AAIL+  +   +G  S  PA A  P A     + +E+E+   +               L
Sbjct: 82  KAAILLVGSFVFLGFCSSKPALA-LPTATVVSQAELEDEKMFEK--------------LL 141

Query: 133 ESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENA 192
           E+  E +EA+K+++ +K+   ++E+A+K + +L+  +    EWK L+A     MG+   A
Sbjct: 142 ENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKA 201

Query: 193 REVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARDVRLI 252
           + ++++IL E PL   AL   A++M +  +     + +E A+ +A    +  E R+++++
Sbjct: 202 KRLYKDILKEQPLLIRALHGLAMVMHKTHDTSVFDMLIE-AMEVARQGNRVTEERNIQVL 261

Query: 253 MAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSP 312
           + Q+  ++   E  L  +++++N++P DFRPY CQG++YSL+DK EEA QQF  Y  L P
Sbjct: 262 IGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVP 314

Query: 313 KKFEVDGYL 322
            +F   G+L
Sbjct: 322 GEFPQKGFL 314

[Close]

BLAST of Cp4.1LG01g18860 vs. TAIR10
Match: AT3G53560.1 (AT3G53560.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 122.1 bits (305), Expect = 6.6e-28
Identity = 99/334 (29.64%), Postives = 170/334 (50.90%), Query Frame = 1


Query: 7   SMSSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSVPVSRNHPVVQ 66
           S +  SSS+       S  +P+        + L   S+     + + S  P+ ++ P   
Sbjct: 17  SFTHTSSSTFPKNLFKSSIQPI--------SSLKSASIKASSSKFQNSITPLPKSTP--- 76

Query: 67  CFKNYARAAILIGAAATMVGKFSHLPARAES-----PVAVE-EEASRMEEEQRIVEDSDQ 126
            F+ +    I +  AA ++    HL + A +     P +VE +E   +EEE+R       
Sbjct: 77  -FRLFKSTCITLTTAAALLLANLHLKSPAIAAPIAPPPSVESKENVTLEEEERA------ 136

Query: 127 DGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKA 186
                  L++ L ++   V+AL+SL++ K+++ +  EA++++++L+  +    EW  LKA
Sbjct: 137 -------LDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKA 196

Query: 187 RLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEG---EAVLLRLERALRIA 246
            +    G  + A+  FEEILA++PL  EA   + LLM     G   + V  R+E A+   
Sbjct: 197 NIFTYSGDLDLAKTGFEEILAKDPLRVEAY--HGLLMAYSDAGLDLKEVESRIEEAMLKC 256

Query: 247 ENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKN 306
           + E    + RD +L++AQI+ ++     AL  Y+EL+ E+P DFRPY CQG+IY+LL K 
Sbjct: 257 KKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQGIIYTLLKKK 316

Query: 307 EEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIF 332
           ++A +QF  +R+L PK      Y    +   K+F
Sbjct: 317 DKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLF 323

[Close]

BLAST of Cp4.1LG01g18860 vs. TAIR10
Match: AT5G02590.1 (AT5G02590.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 119.4 bits (298), Expect = 4.3e-27
Identity = 87/271 (32.10%), Postives = 147/271 (54.24%), Query Frame = 1


Query: 76  ILIGAAATMVGKFSHLP------ARAESPVAVEEEASRMEEEQRIVEDSDQDGQQSSPLN 135
           + +  AA ++    HL       A   SP      A+ +  +Q  +    ++ ++ + L 
Sbjct: 62  VTLTTAAALLSASLHLSTKPVTAATLVSPPPPPSTAADLTSDQ--ISSRPKEEEEEAALE 121

Query: 136 DFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKT 195
             L  N   VEAL+SL++ K +    + AL+ILN+L+  Q    EW+ LKA++    G  
Sbjct: 122 KHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDF 181

Query: 196 ENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLE----RALRIAENEKKAKE 255
           ++A + FEE+L+++P   EA   + L+M    E E+ L  +E     A+   + E K K+
Sbjct: 182 DSATKGFEEVLSKDPFRVEAY--HGLVM-AYSESESKLSEIESRINEAIEKCKKENK-KD 241

Query: 256 ARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFS 315
            RD  L++AQI+ ++ N   AL  Y+EL+ ++P DFRPY CQG+IY+L+ K +EA +QF+
Sbjct: 242 FRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFA 301

Query: 316 KYRELSPKKFEVDGYL-RTPLSRMKIFGSDE 336
           ++R L P+      YL    L+  K+F  ++
Sbjct: 302 EFRRLVPENHPYKEYLDANVLNTNKLFAKNQ 326

[Close]

BLAST of Cp4.1LG01g18860 vs. NCBI nr
Match: gi|659072680|ref|XP_008466719.1| (PREDICTED: uncharacterized protein LOC103504062 [Cucumis melo])

HSP 1 Score: 511.9 bits (1317), Expect = 8.4e-142
Identity = 290/343 (84.55%), Postives = 307/343 (89.50%), Query Frame = 1


Query: 1   MSFTFASMSSPSSSSLSSIFI--SSKSKPVP-PPNLRFVAPLSRTSVSLHRFRVRASSVP 60
           MS TFASMSSPSSSSLSSIF    S SK V    NLRF APLSR S+S+H FRVRASSVP
Sbjct: 1   MSSTFASMSSPSSSSLSSIFNFNPSNSKMVSFSNNLRFAAPLSRHSISVHPFRVRASSVP 60

Query: 61  VSR-NHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEE---EQR 120
           V R +HPVVQC +NYA+AAILIGAAATMVGKFS+LPARAE+P AV EEASRMEE   ++R
Sbjct: 61  VPRTHHPVVQCLRNYAKAAILIGAAATMVGKFSNLPARAETPAAVAEEASRMEETTPDKR 120

Query: 121 IVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVT 180
           IVEDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSA  SVT
Sbjct: 121 IVEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVT 180

Query: 181 EWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERA 240
           EWKFL ARLL EMGKTENAREVFEEILA +PLS+EALFENALLMDRCGEGEAVL RLE A
Sbjct: 181 EWKFLMARLLAEMGKTENAREVFEEILAVDPLSYEALFENALLMDRCGEGEAVLRRLEEA 240

Query: 241 LRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSL 300
           LRIAE E+KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+ EDPSDFRPYFCQGMIYSL
Sbjct: 241 LRIAEKERKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIYSL 300

Query: 301 LDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           LDKN EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 LDKNTEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 343

[Close]

BLAST of Cp4.1LG01g18860 vs. NCBI nr
Match: gi|449463501|ref|XP_004149472.1| (PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 501.5 bits (1290), Expect = 1.1e-138
Identity = 286/345 (82.90%), Postives = 302/345 (87.54%), Query Frame = 1


Query: 1   MSFTFASMSSPSSSSLSSIFI--SSKSKPVP-PPNLRFVAPLSRTSVSLHRFRVRASSVP 60
           MS TFAS+SSPSSSS SSIF    S SK V    NLRF APLSR+SVS+H FRVRASSVP
Sbjct: 1   MSSTFASISSPSSSSFSSIFNFNPSNSKMVSFSNNLRFAAPLSRSSVSVHPFRVRASSVP 60

Query: 61  VS---RNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEE---E 120
           V     +HPVV C +NYA+AAILIGAAATMVGKFS+LPARAES   V EEASR+EE   +
Sbjct: 61  VPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKFSNLPARAESSAVVAEEASRVEETTSD 120

Query: 121 QRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSS 180
            RI EDSDQDG+QSSPLNDFLESNSEAVEALKSLLQQKLEN EDEEALKIL QLVSA  S
Sbjct: 121 HRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPS 180

Query: 181 VTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLE 240
           VTEWKFL ARLLGEMGKTE+AREVFEEILA NPLSFEALFENALLMDRCGEGEAV+ RLE
Sbjct: 181 VTEWKFLMARLLGEMGKTEHAREVFEEILAVNPLSFEALFENALLMDRCGEGEAVIRRLE 240

Query: 241 RALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIY 300
            ALRIAENE KAKEARDV+LIMAQIQFLQKNVE AL SYKEL+ EDPSDFRPYFCQGMIY
Sbjct: 241 EALRIAENENKAKEARDVKLIMAQIQFLQKNVEEALKSYKELVKEDPSDFRPYFCQGMIY 300

Query: 301 SLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           SLLDKN EA+QQF+KYRELSPKKFEVDGYLRTPLSRMKIFGSDEN
Sbjct: 301 SLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 345

[Close]

BLAST of Cp4.1LG01g18860 vs. NCBI nr
Match: gi|700194585|gb|KGN49762.1| (hypothetical protein Csa_5G114590 [Cucumis sativus])

HSP 1 Score: 487.6 bits (1254), Expect = 1.7e-134
Identity = 265/311 (85.21%), Postives = 280/311 (90.03%), Query Frame = 1


Query: 32  NLRFVAPLSRTSVSLHRFRVRASSVPVS---RNHPVVQCFKNYARAAILIGAAATMVGKF 91
           NLRF APLSR+SVS+H FRVRASSVPV     +HPVV C +NYA+AAILIGAAATMVGKF
Sbjct: 7   NLRFAAPLSRSSVSVHPFRVRASSVPVPVPRTHHPVVHCLRNYAKAAILIGAAATMVGKF 66

Query: 92  SHLPARAESPVAVEEEASRMEE---EQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSL 151
           S+LPARAES   V EEASR+EE   + RI EDSDQDG+QSSPLNDFLESNSEAVEALKSL
Sbjct: 67  SNLPARAESSAVVAEEASRVEETTSDHRIFEDSDQDGRQSSPLNDFLESNSEAVEALKSL 126

Query: 152 LQQKLENSEDEEALKILNQLVSAQSSVTEWKFLKARLLGEMGKTENAREVFEEILAENPL 211
           LQQKLEN EDEEALKIL QLVSA  SVTEWKFL ARLLGEMGKTE+AREVFEEILA NPL
Sbjct: 127 LQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARLLGEMGKTEHAREVFEEILAVNPL 186

Query: 212 SFEALFENALLMDRCGEGEAVLLRLERALRIAENEKKAKEARDVRLIMAQIQFLQKNVEG 271
           SFEALFENALLMDRCGEGEAV+ RLE ALRIAENE KAKEARDV+LIMAQIQFLQKNVE 
Sbjct: 187 SFEALFENALLMDRCGEGEAVIRRLEEALRIAENENKAKEARDVKLIMAQIQFLQKNVEE 246

Query: 272 ALTSYKELINEDPSDFRPYFCQGMIYSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPL 331
           AL SYKEL+ EDPSDFRPYFCQGMIYSLLDKN EA+QQF+KYRELSPKKFEVDGYLRTPL
Sbjct: 247 ALKSYKELVKEDPSDFRPYFCQGMIYSLLDKNIEAKQQFAKYRELSPKKFEVDGYLRTPL 306

Query: 332 SRMKIFGSDEN 337
           SRMKIFGSDEN
Sbjct: 307 SRMKIFGSDEN 317

[Close]

BLAST of Cp4.1LG01g18860 vs. NCBI nr
Match: gi|590697066|ref|XP_007045336.1| (Prenylyltransferase superfamily protein [Theobroma cacao])

HSP 1 Score: 375.2 bits (962), Expect = 1.2e-100
Identity = 219/346 (63.29%), Postives = 263/346 (76.01%), Query Frame = 1


Query: 1   MSFTFASMSSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASSV---- 60
           M+ T A +S+PS S L    +SS +       L F AP          FR+RASS     
Sbjct: 1   MNPTLAKLSAPSPSFLHLKSLSSSTSSAS--FLAFPAPKP--------FRLRASSAKSDS 60

Query: 61  -----PVSRNHPVVQCFKNYARAAILIGAAATMVGKFSHLPARAES-PVAVEEEASRMEE 120
                P     P+ Q  + +A+ AIL+GA A M+GKFSH PA+AES P   E+E S +EE
Sbjct: 61  FPSSNPNKHTQPLTQKLQCFAKTAILLGATALMIGKFSHFPAKAESPPTMTEQETSGLEE 120

Query: 121 EQRIVEDSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQS 180
            ++  ED+ Q+ +Q+SPL++FL SN+EA+EALK LL+QKLEN EDEEAL ILN+LVSAQ 
Sbjct: 121 GEQQEEDA-QNPEQTSPLSEFLGSNNEAIEALKYLLEQKLENGEDEEALTILNRLVSAQP 180

Query: 181 SVTEWKFLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRL 240
            VT+WKFL ARLL EMG+TENAR+VFEEIL  NPLSFEALFENALLMDRCGEGEAV+ RL
Sbjct: 181 QVTDWKFLLARLLSEMGQTENARKVFEEILRTNPLSFEALFENALLMDRCGEGEAVIKRL 240

Query: 241 ERALRIAENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMI 300
           E AL IA++EKK KEARDVRLIMAQIQFLQKNVE AL SY++L  EDPSDFRPYFCQGMI
Sbjct: 241 EEALTIAQDEKKVKEARDVRLIMAQIQFLQKNVEEALRSYQQLAKEDPSDFRPYFCQGMI 300

Query: 301 YSLLDKNEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           YSLLD+N EA++QF+KYRELSPKKFEV+GYLRT LSRMK+FG++E+
Sbjct: 301 YSLLDRNAEAKEQFAKYRELSPKKFEVEGYLRTSLSRMKLFGTNES 335

[Close]

BLAST of Cp4.1LG01g18860 vs. NCBI nr
Match: gi|645228432|ref|XP_008220992.1| (PREDICTED: transmembrane and TPR repeat-containing protein 1 [Prunus mume])

HSP 1 Score: 371.3 bits (952), Expect = 1.8e-99
Identity = 216/340 (63.53%), Postives = 253/340 (74.41%), Query Frame = 1


Query: 6   ASMSSPSSSSLSSIFISSKSKPVPPPNLRFVAPLSRTSVSLHRFRVRASS------VPVS 65
           ++++S SSSS    F  + SKP  P  LRF  P S  S      ++  SS      +P +
Sbjct: 5   STLASSSSSSSLFHFKLTPSKPTQPSLLRFAPPHSHNSHHAPALKITVSSTNHNTLLPSN 64

Query: 66  RNH---PVVQCFKNYARAAILIGAAATMVGKFSHLPARAESPVAVEEEASRMEEEQRIVE 125
             H   P++Q  K+YA+AAILIG AAT+  K S L ARAE P A+ E+A          +
Sbjct: 65  GGHNSNPILQNLKHYAKAAILIGVAATIFTKSSTLLARAEPPPALTEQAP--------TQ 124

Query: 126 DSDQDGQQSSPLNDFLESNSEAVEALKSLLQQKLENSEDEEALKILNQLVSAQSSVTEWK 185
            SD + Q SSPL+DFL SNSEA+EALKSLLQQKLEN ED EALKIL +L  AQ S TEWK
Sbjct: 125 VSDDENQSSSPLSDFLGSNSEAIEALKSLLQQKLENGEDGEALKILQRLALAQPSATEWK 184

Query: 186 FLKARLLGEMGKTENAREVFEEILAENPLSFEALFENALLMDRCGEGEAVLLRLERALRI 245
           F+ AR+L EMG+ E+AR+VFEEILA +PLSFEALFENALLMDR GEGEAV+ RLE AL+I
Sbjct: 185 FMMARVLAEMGENESARQVFEEILAADPLSFEALFENALLMDRSGEGEAVMKRLEDALQI 244

Query: 246 AENEKKAKEARDVRLIMAQIQFLQKNVEGALTSYKELINEDPSDFRPYFCQGMIYSLLDK 305
           AE E KAKEARDV+LIMAQIQFLQKNVE AL SY EL  EDP DFRPYFC+GMIYSLLD+
Sbjct: 245 AEEENKAKEARDVKLIMAQIQFLQKNVEDALNSYNELAKEDPKDFRPYFCRGMIYSLLDR 304

Query: 306 NEEARQQFSKYRELSPKKFEVDGYLRTPLSRMKIFGSDEN 337
           N EAR+QF KYR+LSPKKFEVDGYLRTPLSR+K+FG+DEN
Sbjct: 305 NAEAREQFEKYRQLSPKKFEVDGYLRTPLSRVKLFGNDEN 336

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g18860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SG1_ARATH	1.4e-93	60.86	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana GN=SG1 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g18860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMW6_CUCSA	1.2e-134	85.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G114590 PE=4 SV=1	[more]
A0A061E9A2_THECC	8.5e-101	63.29	Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_011097 PE=4 SV...	[more]
B9HJP0_POPTR	1.4e-95	60.66	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14270g PE=4 SV=2	[more]
B9RY34_RICCO	1.4e-95	61.33	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0814120 PE=4 SV=1	[more]
F6HG16_VITVI	1.3e-93	63.37	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01810 PE=4 SV=...	[more]

BLAST of Cp4.1LG01g18860 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18420.1	8.1e-95	60.86	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	4.4e-32	35.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G39470.1	3.5e-29	30.52	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	6.6e-28	29.64	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	4.3e-27	32.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Cp4.1LG01g18860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659072680\|ref\|XP_008466719.1\|	8.4e-142	84.55	PREDICTED: uncharacterized protein LOC103504062 [Cucumis melo]	[more]
gi\|449463501\|ref\|XP_004149472.1\|	1.1e-138	82.90	PREDICTED: protein SLOW GREEN 1, chloroplastic [Cucumis sativus]	[more]
gi\|700194585\|gb\|KGN49762.1\|	1.7e-134	85.21	hypothetical protein Csa_5G114590 [Cucumis sativus]	[more]
gi\|590697066\|ref\|XP_007045336.1\|	1.2e-100	63.29	Prenylyltransferase superfamily protein [Theobroma cacao]	[more]
gi\|645228432\|ref\|XP_008220992.1\|	1.8e-99	63.53	PREDICTED: transmembrane and TPR repeat-containing protein 1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g18860.1	Cp4.1LG01g18860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 129..317 score: 1.8
IPR011990	Tetratricopeptide-like helical domain	unknown	SSF48452	TPR-like	coord: 134..314 score: 4.11
IPR013026	Tetratricopeptide repeat-containing domain	PROFILE	PS50293	TPR_REGION	coord: 139..314 score: 18
IPR019734	Tetratricopeptide repeat	PFAM	PF13174	TPR_6	coord: 248..279 score: 0.031coord: 177..206 score: 0
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 173..206 score: 80.0coord: 247..280 score: 16.0coord: 281..314 score:
IPR019734	Tetratricopeptide repeat	PROFILE	PS50005	TPR	coord: 281..314 score: 8.142coord: 247..280 score: 6.785coord: 173..206 score: 6
None	No IPR available	unknown	Coil	Coil	coord: 136..159 score: -coord: 227..247 score: -coord: 256..276 scor
None	No IPR available	PANTHER	PTHR26312	FAMILY NOT NAMED	coord: 1..336 score: 1.4E
None	No IPR available	PANTHER	PTHR26312:SF70	SUBFAMILY NOT NAMED	coord: 1..336 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g18860	CmaCh04G021690	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g18860	CmoCh04G022680	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g18860	Csa5G114590	Cucumber (Chinese Long) v2	cpecuB420
Cp4.1LG01g18860	CSPI05G02170	Wild cucumber (PI 183967)	cpecpiB418
Cp4.1LG01g18860	Lsi09G007410	Bottle gourd (USVL1VR-Ls)	cpelsiB311
Cp4.1LG01g18860	Bhi12G000886	Wax gourd	cpewgoB0491
Cp4.1LG01g18860	Carg17706	Silver-seed gourd	carcpeB0670

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g18860	Watermelon (Charleston Gray)	cpewcgB370
Cp4.1LG01g18860	Watermelon (97103) v1	cpewmB440
Cp4.1LG01g18860	Melon (DHL92) v3.5.1	cpemeB359
Cp4.1LG01g18860	Cucumber (Gy14) v2	cgybcpeB630
Cp4.1LG01g18860	Melon (DHL92) v3.6.1	cpemedB419
Cp4.1LG01g18860	Silver-seed gourd	carcpeB1158
Cp4.1LG01g18860	Cucumber (Chinese Long) v3	cpecucB0522
Cp4.1LG01g18860	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g18860	Cucurbita maxima (Rimu)	cmacpeB318
Cp4.1LG01g18860	Cucurbita moschata (Rifu)	cmocpeB280