Lsi07G007080 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G007080
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Avr9/Cf-9 rapidly elicited protein 194
Location	chr07 : 7598536 .. 7599045 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAAAAAGCTCTTCAAACCAAAGACAACAATCACAAGACCAACTCTCTTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCCTTCAAACGCCATCTTGACTCCGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTACCCTCCGACGACCGCCGAGCTTCGCTCCCGACCCCGCCACCGCCTCGCCCTTGCGTACCGATGACGACGCCCATGTCCAAGGCTTCTTCCAAGCTCTCTCGGTCGCTCTCCAAAATTCTCCGGTCTCTTTTTCGACCCAAACCTAATTCTAATGCCTCGATTTTTCGGGCTCAAGATCAACCCAGAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCCGAAGTCCCCGAGGCCGACTTCGGACCCGGTCTTTCGCCGGAGATTAGCTCTTTGCTGAAGAAGACAGCTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGCTTTGA

mRNA sequence

ATGGAAAAAAAAGCTCTTCAAACCAAAGACAACAATCACAAGACCAACTCTCTTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCCTTCAAACGCCATCTTGACTCCGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTACCCTCCGACGACCGCCGAGCTTCGCTCCCGACCCCGCCACCGCCTCGCCCTTGCGTACCGATGACGACGCCCATGTCCAAGGCTTCTTCCAAGCTCTCTCGGTCGCTCTCCAAAATTCTCCGGTCTCTTTTTCGACCCAAACCTAATTCTAATGCCTCGATTTTTCGGGCTCAAGATCAACCCAGAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCCGAAGTCCCCGAGGCCGACTTCGGACCCGGTCTTTCGCCGGAGATTAGCTCTTTGCTGAAGAAGACAGCTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGCTTTGA

Coding sequence (CDS)

ATGGAAAAAAAAGCTCTTCAAACCAAAGACAACAATCACAAGACCAACTCTCTTTTGTGGGACTGTGGAAGCTCTCTCTATGATTCCTTTGAACTCAATTCCTTCAAACGCCATCTTGACTCCGCCATAGCATCAAGAACTTTCTCCATGCCTCACTTACCCTCCGACGACCGCCGAGCTTCGCTCCCGACCCCGCCACCGCCTCGCCCTTGCGTACCGATGACGACGCCCATGTCCAAGGCTTCTTCCAAGCTCTCTCGGTCGCTCTCCAAAATTCTCCGGTCTCTTTTTCGACCCAAACCTAATTCTAATGCCTCGATTTTTCGGGCTCAAGATCAACCCAGAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCCGAAGTCCCCGAGGCCGACTTCGGACCCGGTCTTTCGCCGGAGATTAGCTCTTTGCTGAAGAAGACAGCTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGCTTTGA

Protein sequence

MEKKALQTKDNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDRRASLPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFYVFYEVGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISCVL

Homology

[Close]

BLAST of Lsi07G007080 vs. TrEMBL
Match: A0A0A0KV10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051450 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 2.4e-72
Identity = 144/173 (83.24%), Postives = 149/173 (86.13%), Query Frame = 1


Query: 1   MEKKALQTKDNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPS----D 60
           MEK   Q    NHK NS LWDC SSLYDSFELNSF+RHLDSAIASRTFSMPHL +    D
Sbjct: 1   MEKNVYQITKENHKPNSRLWDCESSLYDSFELNSFRRHLDSAIASRTFSMPHLSTSSDDD 60

Query: 61  DRRASLPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRD 120
             +ASLPTPPPPRPCVPMTTPMSKASSK SRS SKILRSLFRPKPNSN  IFRAQDQPRD
Sbjct: 61  HHQASLPTPPPPRPCVPMTTPMSKASSKFSRSFSKILRSLFRPKPNSNTPIFRAQDQPRD 120

Query: 121 GFYVFYEVGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISCVL 170
           GFYVFYEVGSLSTIPEVPEAD G GLSPEISSL+KKTAS RFTPNS+GISCVL
Sbjct: 121 GFYVFYEVGSLSTIPEVPEADLGAGLSPEISSLVKKTASGRFTPNSIGISCVL 173

[Close]

BLAST of Lsi07G007080 vs. TrEMBL
Match: B9GL78_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10440g PE=4 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.1e-35
Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = 1


Query: 7   QTKDNNHKT-----NSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDRRAS 66
           Q K+ N KT      +L+WDCGSSLYDSFEL SF+R LDSAI SRT SMPH P    R  
Sbjct: 23  QNKNQNQKTLQANNKALVWDCGSSLYDSFELKSFERQLDSAINSRTLSMPHFPD---RQV 82

Query: 67  LPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFYVF 126
           L TPPPP           K  SK+SRSL+K L+S+F+ K NS +++FR Q++ +D +YV 
Sbjct: 83  LTTPPPP----------PKKPSKISRSLNKFLKSMFKSKQNS-STMFRVQERLQDEYYVI 142

Query: 127 YE-VGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGIS 167
           Y+  G+L+TIPEVPE DFG G SPEI+SL++KT S+RFT  S+GIS
Sbjct: 143 YDKSGALTTIPEVPEIDFG-GFSPEINSLVRKTVSDRFTAASIGIS 173

[Close]

BLAST of Lsi07G007080 vs. TrEMBL
Match: A0A061G5W8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016419 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.6e-34
Identity = 90/168 (53.57%), Postives = 118/168 (70.24%), Query Frame = 1


Query: 3   KKALQTKDNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDRRASL 62
           +KA Q      +   L+WDCGS+LYDSFELNSFKR LDSAI SRT SMPHL   D RA  
Sbjct: 31  QKAKQKTQKTQEGKHLVWDCGSTLYDSFELNSFKRQLDSAIHSRTMSMPHLV--DTRA-- 90

Query: 63  PTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFYVFY 122
             PPPP+  +P      K  SK SRS+ K+ +S+F+ K +S++S+F  + +  + +YV Y
Sbjct: 91  -PPPPPQSTIPPPVVSKKQPSKFSRSIQKLFKSMFKFKQSSSSSVFWLKQRSHEEYYVVY 150

Query: 123 E-VGSLSTIPEVPEADFGPGLSPEISSL-LKKTASERFT-PNSLGISC 168
           +  G+L+TIPEVPE DFG GLSPEI+SL +K+TASERFT  +++GISC
Sbjct: 151 DKTGALTTIPEVPEIDFG-GLSPEINSLVVKRTASERFTAASTVGISC 192

[Close]

BLAST of Lsi07G007080 vs. TrEMBL
Match: A0A067GM17_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039278mg PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.6e-34
Identity = 93/175 (53.14%), Postives = 120/175 (68.57%), Query Frame = 1


Query: 1   MEKKALQTKDNNH-------KTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHL 60
           +EK  +QT   +H       K    +WDCGS+LYDSFEL SFKR LDSAI SRT SMPHL
Sbjct: 10  LEKLQVQTHTQSHSQEATDKKNQEPVWDCGSTLYDSFELKSFKRQLDSAIVSRTLSMPHL 69

Query: 61  PSDDRRASLPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQ 120
           P  DRRA+ P P P     P  +   K+SSK+SRSL K+L+S+F+ K  S++S  + +D+
Sbjct: 70  P--DRRATNPAPAPGPAPAPAPSLTRKSSSKISRSLQKLLKSVFKSK-QSSSSWLKLRDR 129

Query: 121 PRDGFYVFYE-VGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISC 168
             D + V+Y+  G+L+TIPE PE DFG GLSPEI+S L++TASERFT  +L ISC
Sbjct: 130 SNDEYCVYYDKTGALTTIPEGPEIDFG-GLSPEINS-LRRTASERFTAPTLAISC 179

[Close]

BLAST of Lsi07G007080 vs. TrEMBL
Match: A0A059CFX6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01714 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.5e-34
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 1   MEKKALQTKDNN-HKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDRR 60
           MEK    +K     + +S +WDCGS+LYDSFEL SF+R L SAI++RT SMPHLP  DRR
Sbjct: 1   MEKSLESSKQKRLDRPSSAVWDCGSALYDSFELKSFERQLGSAISARTLSMPHLP--DRR 60

Query: 61  ASLPTPPP---PRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQ--- 120
           A LP PPP   PRP  P     +K  S +SRS+ ++LRS+F+PKP+  A+ F A D+   
Sbjct: 61  A-LPAPPPPPQPRPAAP-----AKKRSGISRSIQRLLRSVFKPKPSPTAA-FGAGDRYSR 120

Query: 121 ---PRDGFYVFYE-VGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISC 168
               +DGFYV Y+  G+L+TIPE PE ++   LSPE+   ++KTASERF P+S+GISC
Sbjct: 121 VAGEKDGFYVVYDKSGALTTIPEAPEVEYLGKLSPEMDRFVRKTASERFAPSSIGISC 169

[Close]

BLAST of Lsi07G007080 vs. TAIR10
Match: AT5G41810.1 (AT5G41810.1 unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.1e-29
Identity = 87/195 (44.62%), Postives = 120/195 (61.54%), Query Frame = 1


Query: 2   EKKALQTKDNN------HKTNSLLWDCGSSLYDSFELNSFKRHLDSAI---ASRTFSMPH 61
           E+K  +T +NN       KT+S +WDCGS+LYDSFELNSFKR LDSAI   ++RT SM H
Sbjct: 99  EEKKKETNNNNLSNMKHKKTSSHVWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSH 158

Query: 62  LPSDDRRA----------SLPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPN 121
           LP  DRR           S P PPPP      ++   K S+K+SRSL + L+S+F+PK +
Sbjct: 159 LP--DRRIPSLSSLSPEYSPPLPPPPTTSSSSSSGGKKHSNKISRSLQRFLKSMFKPKQH 218

Query: 122 S-----NASIFRAQDQ---PRDGFYVFYE-VGSLSTIPEVPEADFGPGLSPEISSLLKKT 168
                 ++ +++A       +D +YV Y+  GSL+TIPE  E +    +SPEI+SL++KT
Sbjct: 219 QSLTTPSSPVYKAVGHGGGDKDRYYVVYDKSGSLTTIPESTEKE----VSPEINSLVRKT 278

[Close]

BLAST of Lsi07G007080 vs. TAIR10
Match: AT1G64340.1 (AT1G64340.1 unknown protein)

HSP 1 Score: 95.5 bits (236), Expect = 3.3e-20
Identity = 66/155 (42.58%), Postives = 92/155 (59.35%), Query Frame = 1


Query: 16  NSLLWDCGSSLYDSFELNSFKRHLDSAIAS--RTFSMPHLPSDDRRASLPTPPPPRPCVP 75
           N  +WDC S+LYDSFELNSF R L+SAI+S  R+ SMPHL S         PPPP     
Sbjct: 119 NRKVWDCESTLYDSFELNSFNRQLNSAISSSARSMSMPHLSS---------PPPPSETTS 178

Query: 76  MTTPMSKA-SSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFY-VFYEVGSLSTIP 135
            +T   ++ + K+SRSL K+++S+F+ K ++            D +Y VF + GSL+TIP
Sbjct: 179 SSTKKQQSPTKKISRSLGKLIKSMFKQKQSNALFKTGHSGVDMDKYYVVFDKTGSLTTIP 238

Query: 136 EVPEADFGPGLSPEISSLLKKTASERFTPNSLGIS 167
           E  E+    G   EI+SL++KT SER   + L +S
Sbjct: 239 ESGESTEMVG--SEINSLVRKTTSERIPQSRLVVS 262

[Close]

BLAST of Lsi07G007080 vs. NCBI nr
Match: gi|778697524|ref|XP_011654341.1| (PREDICTED: uncharacterized protein LOC105435347 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 3.5e-72
Identity = 144/173 (83.24%), Postives = 149/173 (86.13%), Query Frame = 1


Query: 1   MEKKALQTKDNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPS----D 60
           MEK   Q    NHK NS LWDC SSLYDSFELNSF+RHLDSAIASRTFSMPHL +    D
Sbjct: 1   MEKNVYQITKENHKPNSRLWDCESSLYDSFELNSFRRHLDSAIASRTFSMPHLSTSSDDD 60

Query: 61  DRRASLPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRD 120
             +ASLPTPPPPRPCVPMTTPMSKASSK SRS SKILRSLFRPKPNSN  IFRAQDQPRD
Sbjct: 61  HHQASLPTPPPPRPCVPMTTPMSKASSKFSRSFSKILRSLFRPKPNSNTPIFRAQDQPRD 120

Query: 121 GFYVFYEVGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISCVL 170
           GFYVFYEVGSLSTIPEVPEAD G GLSPEISSL+KKTAS RFTPNS+GISCVL
Sbjct: 121 GFYVFYEVGSLSTIPEVPEADLGAGLSPEISSLVKKTASGRFTPNSIGISCVL 173

[Close]

BLAST of Lsi07G007080 vs. NCBI nr
Match: gi|659102113|ref|XP_008451959.1| (PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo])

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-67
Identity = 140/172 (81.40%), Postives = 144/172 (83.72%), Query Frame = 1


Query: 1   MEKKALQTKDNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDD--- 60
           MEKK  Q    NH  NS  WDC SSLYDSFELNSFKRHLDSAIASRTFSMPHL S +   
Sbjct: 1   MEKKVHQITKENHNANSPFWDCESSLYDSFELNSFKRHLDSAIASRTFSMPHLSSSNGHH 60

Query: 61  RRASLPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDG 120
            +ASLPTPPPPR CVP     SKASSK SRS SKILRSLFRPKPNSN  IFRAQDQPRDG
Sbjct: 61  HQASLPTPPPPRTCVP-----SKASSKFSRSFSKILRSLFRPKPNSNTPIFRAQDQPRDG 120

Query: 121 FYVFYEVGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISCVL 170
           FYVFYEVGSLSTIPEVPEADFG GLSPEISSL+KKTASERFTPNS+GISCVL
Sbjct: 121 FYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASERFTPNSIGISCVL 167

[Close]

BLAST of Lsi07G007080 vs. NCBI nr
Match: gi|1009156719|ref|XP_015896390.1| (PREDICTED: probable inactive serine/threonine-protein kinase slob1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 174.5 bits (441), Expect = 1.6e-40
Identity = 101/166 (60.84%), Postives = 121/166 (72.89%), Query Frame = 1


Query: 10  DNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDR-RASL----PT 69
           +NN+K  S +WDCGSSLYDSFELNSFKR LDSAIA RT SMPHL    R R  L    P 
Sbjct: 27  NNNNKNTSHVWDCGSSLYDSFELNSFKRQLDSAIACRTMSMPHLSDRSRGRPPLLPPRPP 86

Query: 70  PPPPRPCVPMTT--PMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFYVFY 129
           PPPP P  P TT   ++K SSKLSRSL+K+LRS+F+    S   +FR ++Q  DGF+V Y
Sbjct: 87  PPPPPPAAPTTTVAAVNKKSSKLSRSLNKLLRSVFK----SKNPVFRVKEQSEDGFFVVY 146

Query: 130 E-VGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGISC 168
           +  G+L+TIPEVPE DFG GLSPEI SL+++T SERFT  S+GISC
Sbjct: 147 DKSGALTTIPEVPEIDFG-GLSPEIGSLVRRTGSERFTAASIGISC 187

[Close]

BLAST of Lsi07G007080 vs. NCBI nr
Match: gi|566148234|ref|XP_002299484.2| (hypothetical protein POPTR_0001s10440g [Populus trichocarpa])

HSP 1 Score: 156.4 bits (394), Expect = 4.5e-35
Identity = 92/166 (55.42%), Postives = 116/166 (69.88%), Query Frame = 1


Query: 7   QTKDNNHKT-----NSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDRRAS 66
           Q K+ N KT      +L+WDCGSSLYDSFEL SF+R LDSAI SRT SMPH P    R  
Sbjct: 23  QNKNQNQKTLQANNKALVWDCGSSLYDSFELKSFERQLDSAINSRTLSMPHFPD---RQV 82

Query: 67  LPTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFYVF 126
           L TPPPP           K  SK+SRSL+K L+S+F+ K NS +++FR Q++ +D +YV 
Sbjct: 83  LTTPPPP----------PKKPSKISRSLNKFLKSMFKSKQNS-STMFRVQERLQDEYYVI 142

Query: 127 YE-VGSLSTIPEVPEADFGPGLSPEISSLLKKTASERFTPNSLGIS 167
           Y+  G+L+TIPEVPE DFG G SPEI+SL++KT S+RFT  S+GIS
Sbjct: 143 YDKSGALTTIPEVPEIDFG-GFSPEINSLVRKTVSDRFTAASIGIS 173

[Close]

BLAST of Lsi07G007080 vs. NCBI nr
Match: gi|590679047|ref|XP_007040470.1| (Uncharacterized protein TCM_016419 [Theobroma cacao])

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-34
Identity = 90/168 (53.57%), Postives = 118/168 (70.24%), Query Frame = 1


Query: 3   KKALQTKDNNHKTNSLLWDCGSSLYDSFELNSFKRHLDSAIASRTFSMPHLPSDDRRASL 62
           +KA Q      +   L+WDCGS+LYDSFELNSFKR LDSAI SRT SMPHL   D RA  
Sbjct: 31  QKAKQKTQKTQEGKHLVWDCGSTLYDSFELNSFKRQLDSAIHSRTMSMPHLV--DTRA-- 90

Query: 63  PTPPPPRPCVPMTTPMSKASSKLSRSLSKILRSLFRPKPNSNASIFRAQDQPRDGFYVFY 122
             PPPP+  +P      K  SK SRS+ K+ +S+F+ K +S++S+F  + +  + +YV Y
Sbjct: 91  -PPPPPQSTIPPPVVSKKQPSKFSRSIQKLFKSMFKFKQSSSSSVFWLKQRSHEEYYVVY 150

Query: 123 E-VGSLSTIPEVPEADFGPGLSPEISSL-LKKTASERFT-PNSLGISC 168
           +  G+L+TIPEVPE DFG GLSPEI+SL +K+TASERFT  +++GISC
Sbjct: 151 DKTGALTTIPEVPEIDFG-GLSPEINSLVVKRTASERFTAASTVGISC 192

The following BLAST results are available for this feature:

BLAST of Lsi07G007080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G007080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV10_CUCSA	2.4e-72	83.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051450 PE=4 SV=1	[more]
B9GL78_POPTR	3.1e-35	55.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10440g PE=4 SV=2	[more]
A0A061G5W8_THECC	2.6e-34	53.57	Uncharacterized protein OS=Theobroma cacao GN=TCM_016419 PE=4 SV=1	[more]
A0A067GM17_CITSI	2.6e-34	53.14	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g039278mg PE=4 SV=1	[more]
A0A059CFX6_EUCGR	4.5e-34	51.69	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01714 PE=4 SV=1	[more]

BLAST of Lsi07G007080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41810.1	5.1e-29	44.62	unknown protein	[more]
AT1G64340.1	3.3e-20	42.58	unknown protein	[more]

BLAST of Lsi07G007080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697524\|ref\|XP_011654341.1\|	3.5e-72	83.24	PREDICTED: uncharacterized protein LOC105435347 [Cucumis sativus]	[more]
gi\|659102113\|ref\|XP_008451959.1\|	1.2e-67	81.40	PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo]	[more]
gi\|1009156719\|ref\|XP_015896390.1\|	1.6e-40	60.84	PREDICTED: probable inactive serine/threonine-protein kinase slob1 isoform X1 [Z...	[more]
gi\|566148234\|ref\|XP_002299484.2\|	4.5e-35	55.42	hypothetical protein POPTR_0001s10440g [Populus trichocarpa]	[more]
gi\|590679047\|ref\|XP_007040470.1\|	3.8e-34	53.57	Uncharacterized protein TCM_016419 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G007080.1	Lsi07G007080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33978	FAMILY NOT NAMED	coord: 2..168 score: 1.8
None	No IPR available	PANTHER	PTHR33978:SF4	SUBFAMILY NOT NAMED	coord: 2..168 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G007080	Csa4G051450	Cucumber (Chinese Long) v2	culsiB304
Lsi07G007080	Csa5G150470	Cucumber (Chinese Long) v2	culsiB387
Lsi07G007080	CSPI04G06260	Wild cucumber (PI 183967)	cpilsiB304
Lsi07G007080	CSPI05G04730	Wild cucumber (PI 183967)	cpilsiB391
Lsi07G007080	Cucsa.107290	Cucumber (Gy14) v1	cgylsiB142
Lsi07G007080	Cucsa.303790	Cucumber (Gy14) v1	cgylsiB492
Lsi07G007080	CmaCh04G007010	Cucurbita maxima (Rimu)	cmalsiB699
Lsi07G007080	CmoCh15G013420	Cucurbita moschata (Rifu)	cmolsiB280
Lsi07G007080	CmoCh16G006060	Cucurbita moschata (Rifu)	cmolsiB314
Lsi07G007080	CmoCh04G007440	Cucurbita moschata (Rifu)	cmolsiB693
Lsi07G007080	Cla011381	Watermelon (97103) v1	lsiwmB456
Lsi07G007080	Cla010920	Watermelon (97103) v1	lsiwmB444
Lsi07G007080	MELO3C016304	Melon (DHL92) v3.5.1	lsimeB455
Lsi07G007080	MELO3C005742	Melon (DHL92) v3.5.1	lsimeB427
Lsi07G007080	ClCG07G014930	Watermelon (Charleston Gray)	lsiwcgB406
Lsi07G007080	ClCG01G001990	Watermelon (Charleston Gray)	lsiwcgB397
Lsi07G007080	MELO3C005742.2	Melon (DHL92) v3.6.1	lsimedB447
Lsi07G007080	MELO3C016304.2	Melon (DHL92) v3.6.1	lsimedB473
Lsi07G007080	Cla97C01G002050	Watermelon (97103) v2	lsiwmbB394
Lsi07G007080	Cla97C07G141870	Watermelon (97103) v2	lsiwmbB405
Lsi07G007080	Bhi01G002285	Wax gourd	lsiwgoB544
Lsi07G007080	Cp4.1LG13g01140	Cucurbita pepo (Zucchini)	cpelsiB157
Lsi07G007080	Cp4.1LG14g02480	Cucurbita pepo (Zucchini)	cpelsiB184
Lsi07G007080	Cp4.1LG01g00270	Cucurbita pepo (Zucchini)	cpelsiB378
Lsi07G007080	CsGy4G006180	Cucumber (Gy14) v2	cgyblsiB278
Lsi07G007080	CsGy5G002010	Cucumber (Gy14) v2	cgyblsiB353
Lsi07G007080	Carg21271	Silver-seed gourd	carlsiB328
Lsi07G007080	Carg13059	Silver-seed gourd	carlsiB040
Lsi07G007080	Carg22241	Silver-seed gourd	carlsiB536
Lsi07G007080	CsaV3_4G006460	Cucumber (Chinese Long) v3	cuclsiB323
Lsi07G007080	CsaV3_5G002120	Cucumber (Chinese Long) v3	cuclsiB410

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Lsi07G007080	Lsi09G001840	Bottle gourd (USVL1VR-Ls)	lsilsiB020

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G007080	Wax gourd	lsiwgoB542
Lsi07G007080	Cucurbita maxima (Rimu)	cmalsiB292
Lsi07G007080	Cucurbita maxima (Rimu)	cmalsiB325