Cp4.1LG13g01140 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG13g01140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPlant/K16L22-9 protein, putative
LocationCp4.1LG13 : 828598 .. 829062 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCCCTAAATTCAACAAATCAAAATCCTCTCAATCCGCCCTCGTCTGGGACTGCGGAAGCTCCCTTTACGATTCCTTCGAACTCAATTCCCTCAAACGCCAACTCGATTCCGCTATTGCTTCAAGATCCTTGTCCATGCCTCATCTCCCTGGCCGCCGCTGCCTTCCTCCTCCGCCGCCGCTTCCGCCTTCCAAAAGGCCGTCCAAGATTTCCAGGTCTCTGCACAAATTTCTTCGATCAGTATTCAGGCACAAGCCGAATTCGAGCCCTAGCGTTGAGGCTAATCCGGAACGAGCCGATGCTGGATATTACGTTCTGTATGGCGATGACGCGGATCCGCTCTCTGCAAATCCGGAGGTCGGATTCCCCGGATTCTCGCCGGAAATTGGCTCTTTGGTCCGGCGCACTGCGTCCGAGAGGTTCACGGCGGCTACTTCCATGGGTATTTCTTGTGCTTGA

mRNA sequence

ATGGCAAGCCCTAAATTCAACAAATCAAAATCCTCTCAATCCGCCCTCGTCTGGGACTGCGGAAGCTCCCTTTACGATTCCTTCGAACTCAATTCCCTCAAACGCCAACTCGATTCCGCTATTGCTTCAAGATCCTTGTCCATGCCTCATCTCCCTGGCCGCCGCTGCCTTCCTCCTCCGCCGCCGCTTCCGCCTTCCAAAAGGCCGTCCAAGATTTCCAGGTCTCTGCACAAATTTCTTCGATCAGTATTCAGGCACAAGCCGAATTCGAGCCCTAGCGTTGAGGCTAATCCGGAACGAGCCGATGCTGGATATTACGTTCTGTATGGCGATGACGCGGATCCGCTCTCTGCAAATCCGGAGGTCGGATTCCCCGGATTCTCGCCGGAAATTGGCTCTTTGGTCCGGCGCACTGCGTCCGAGAGGTTCACGGCGGCTACTTCCATGGGTATTTCTTGTGCTTGA

Coding sequence (CDS)

ATGGCAAGCCCTAAATTCAACAAATCAAAATCCTCTCAATCCGCCCTCGTCTGGGACTGCGGAAGCTCCCTTTACGATTCCTTCGAACTCAATTCCCTCAAACGCCAACTCGATTCCGCTATTGCTTCAAGATCCTTGTCCATGCCTCATCTCCCTGGCCGCCGCTGCCTTCCTCCTCCGCCGCCGCTTCCGCCTTCCAAAAGGCCGTCCAAGATTTCCAGGTCTCTGCACAAATTTCTTCGATCAGTATTCAGGCACAAGCCGAATTCGAGCCCTAGCGTTGAGGCTAATCCGGAACGAGCCGATGCTGGATATTACGTTCTGTATGGCGATGACGCGGATCCGCTCTCTGCAAATCCGGAGGTCGGATTCCCCGGATTCTCGCCGGAAATTGGCTCTTTGGTCCGGCGCACTGCGTCCGAGAGGTTCACGGCGGCTACTTCCATGGGTATTTCTTGTGCTTGA

Protein sequence

MASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCLPPPPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSANPEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA
Homology
[Close]
BLAST of Cp4.1LG13g01140 vs. TrEMBL
Match: A0A0A0KMF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G150470 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 5.2e-61
Identity = 130/161 (80.75%), Postives = 139/161 (86.34%), Query Frame = 1 

Query: 1   MASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCL--- 60
           MA+P FNKSKS+QSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLPGR C    
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRLCTLLP 60

Query: 61  -PPPPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSP-SVEANPERA--DAGYYVLYGDDA 120
            PPPPP PPSKR SKISRSLHKFLRSVF+HK NS P + EANPER   D G+YVLY D+A
Sbjct: 61  PPPPPPPPPSKRSSKISRSLHKFLRSVFKHKTNSIPGTFEANPERVDDDHGFYVLYEDEA 120

Query: 121 DPLSANPEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           + LSA PEVGFPGFSPEIGSLVRRT SERFTAATSM ISCA
Sbjct: 121 NSLSAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 161

[Close]
BLAST of Cp4.1LG13g01140 vs. TrEMBL
Match: B9GL78_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10440g PE=4 SV=2)

HSP 1 Score: 149.4 bits (376), Expect = 3.5e-33
Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 1 

Query: 10  KSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCLPPPPPLPPSKRP 69
           +++  ALVWDCGSSLYDSFEL S +RQLDSAI SR+LSMPH P R+ L  PP  PP K+P
Sbjct: 33  QANNKALVWDCGSSLYDSFELKSFERQLDSAINSRTLSMPHFPDRQVLTTPP--PPPKKP 92

Query: 70  SKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSANPEV---GFPG 129
           SKISRSL+KFL+S+F+ K NSS       ER    YYV+Y D +  L+  PEV    F G
Sbjct: 93  SKISRSLNKFLKSMFKSKQNSSTMFRVQ-ERLQDEYYVIY-DKSGALTTIPEVPEIDFGG 152

Query: 130 FSPEIGSLVRRTASERFTAATSMGIS 153
           FSPEI SLVR+T S+RFTAA S+GIS
Sbjct: 153 FSPEINSLVRKTVSDRFTAA-SIGIS 173

[Close]
BLAST of Cp4.1LG13g01140 vs. TrEMBL
Match: A0A068UUB6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035529001 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 5.0e-32
Identity = 98/177 (55.37%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 2   ASPKFNKSKSSQSA----------LVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHL 61
           A P  N++K S+SA          L+WDCGSSLYDSFEL S +RQLDSAI SR+LSMPHL
Sbjct: 50  ARPLENQAKISKSAEQPADAAADPLLWDCGSSLYDSFELKSFERQLDSAIHSRTLSMPHL 109

Query: 62  PGRRCL--------PPPPPLPPSKRPSKISRSLHKFLRSVFRHKP---NSSPSVEANPER 121
             RR +        P  PP P SK+ SKISRS HKFLRSVF+ K    N +P   AN ++
Sbjct: 110 SDRRVIDGGNHHQPPSQPPQPMSKKSSKISRSFHKFLRSVFKPKAQNGNKNPFFPANEQQ 169

Query: 122 ADA-GYYVLYG-DDADPLSANPEVG-FPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           A   G+YV+Y  D +  LS  PEV  F G SPE  SLVRRTAS+RF A +SMGISCA
Sbjct: 170 ATRDGFYVVYDIDKSGALSTIPEVSEFDGLSPEYKSLVRRTASDRF-AVSSMGISCA 225

[Close]
BLAST of Cp4.1LG13g01140 vs. TrEMBL
Match: A0A061G5W8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016419 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.5e-31
Identity = 89/163 (54.60%), Postives = 110/163 (67.48%), Query Frame = 1 

Query: 2   ASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCLPP-- 61
           A  K  K++  +  LVWDCGS+LYDSFELNS KRQLDSAI SR++SMPHL   R  PP  
Sbjct: 33  AKQKTQKTQEGKH-LVWDCGSTLYDSFELNSFKRQLDSAIHSRTMSMPHLVDTRAPPPPP 92

Query: 62  ----PPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADP 121
               PPP+   K+PSK SRS+ K  +S+F+ K +SS SV    +R+   YYV+Y D    
Sbjct: 93  QSTIPPPVVSKKQPSKFSRSIQKLFKSMFKFKQSSSSSVFWLKQRSHEEYYVVY-DKTGA 152

Query: 122 LSANPEV---GFPGFSPEIGSL-VRRTASERFTAATSMGISCA 155
           L+  PEV    F G SPEI SL V+RTASERFTAA+++GISCA
Sbjct: 153 LTTIPEVPEIDFGGLSPEINSLVVKRTASERFTAASTVGISCA 193

[Close]
BLAST of Cp4.1LG13g01140 vs. TrEMBL
Match: K4CPK5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.3e-31
Identity = 89/160 (55.62%), Postives = 107/160 (66.88%), Query Frame = 1 

Query: 3   SPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCLPPPPP 62
           SP+   S ++   L+WDCGSSLYDSFEL S +RQLDSAI+SRSLSMPHLP RR L PP  
Sbjct: 9   SPQKMASAAANKPLIWDCGSSLYDSFELKSFERQLDSAISSRSLSMPHLPDRRLLIPPST 68

Query: 63  LPP-------SKRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADP 122
             P       SK+ S+ISRS  K L+SVFR K ++SP  +        G+YV+Y D +  
Sbjct: 69  TDPQQTTQPISKKTSRISRSFQKLLKSVFRAKQSNSPLFQGQNR---DGFYVVY-DKSGA 128

Query: 123 LSANPE-VGFPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           L+  PE   + G SPEI SLVRRT SERFT ATS+GISCA
Sbjct: 129 LTTIPEGPEYDGLSPEIKSLVRRTGSERFT-ATSIGISCA 163

[Close]
BLAST of Cp4.1LG13g01140 vs. TAIR10
Match: AT5G41810.1 (AT5G41810.1 unknown protein)

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-27
Identity = 81/178 (45.51%), Postives = 102/178 (57.30%), Query Frame = 1 

Query: 7   NKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAI---ASRSLSMPHLPGRRC------- 66
           N      S+ VWDCGS+LYDSFELNS KRQLDSAI   ++R++SM HLP RR        
Sbjct: 112 NMKHKKTSSHVWDCGSTLYDSFELNSFKRQLDSAISASSARTMSMSHLPDRRIPSLSSLS 171

Query: 67  ------LPPPPPLPPS------KRPSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAG 126
                 LPPPP    S      K  +KISRSL +FL+S+F+ K + S +  ++P     G
Sbjct: 172 PEYSPPLPPPPTTSSSSSSGGKKHSNKISRSLQRFLKSMFKPKQHQSLTTPSSPVYKAVG 231

Query: 127 --------YYVLYGDDADPLSANPEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA 155
                   YYV+Y D +  L+  PE      SPEI SLVR+T SERF A+  +GISCA
Sbjct: 232 HGGGDKDRYYVVY-DKSGSLTTIPESTEKEVSPEINSLVRKTVSERFPASRVVGISCA 288

[Close]
BLAST of Cp4.1LG13g01140 vs. TAIR10
Match: AT1G64340.1 (AT1G64340.1 unknown protein)

HSP 1 Score: 84.3 bits (207), Expect = 7.0e-17
Identity = 65/156 (41.67%), Postives = 83/156 (53.21%), Query Frame = 1 

Query: 3   SPKFNKSKSS-----QSALVWDCGSSLYDSFELNSLKRQLDSAIAS--RSLSMPHLPGRR 62
           +PK N  +S+     ++  VWDC S+LYDSFELNS  RQL+SAI+S  RS+SMPHL    
Sbjct: 103 NPKLNTEESTNLDKMKNRKVWDCESTLYDSFELNSFNRQLNSAISSSARSMSMPHLSS-- 162

Query: 63  CLPPPPPLPPSKR-------PSKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVL 122
             PPPP    S           KISRSL K ++S+F+ K  S+   +      D   Y +
Sbjct: 163 --PPPPSETTSSSTKKQQSPTKKISRSLGKLIKSMFKQK-QSNALFKTGHSGVDMDKYYV 222

Query: 123 YGDDADPLSANPEVG--FPGFSPEIGSLVRRTASER 143
             D    L+  PE G        EI SLVR+T SER
Sbjct: 223 VFDKTGSLTTIPESGESTEMVGSEINSLVRKTTSER 253

[Close]
BLAST of Cp4.1LG13g01140 vs. NCBI nr
Match: gi|659074026|ref|XP_008437381.1| (PREDICTED: uncharacterized protein LOC103482814 [Cucumis melo])

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-64
Identity = 133/158 (84.18%), Postives = 141/158 (89.24%), Query Frame = 1 

Query: 1   MASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCL--- 60
           MA+P FNKSKS+QSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLPGRRCL   
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRRCLLPP 60

Query: 61  PPPPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSP-SVEANPERADAGYYVLYGDDADPL 120
           PPPPP PPSKR SKISRSLHKFLRSVFRHK NS P S EANPER D G+YVLY D+++ L
Sbjct: 61  PPPPPPPPSKRSSKISRSLHKFLRSVFRHKTNSIPGSFEANPERVDEGFYVLYEDESNSL 120

Query: 121 SANPEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           SA PEVGFPGFSPEIGSLVRRT SERFTAATSM ISCA
Sbjct: 121 SAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 158

[Close]
BLAST of Cp4.1LG13g01140 vs. NCBI nr
Match: gi|778699401|ref|XP_011654703.1| (PREDICTED: uncharacterized protein LOC105435436 [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 7.4e-61
Identity = 130/161 (80.75%), Postives = 139/161 (86.34%), Query Frame = 1 

Query: 1   MASPKFNKSKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCL--- 60
           MA+P FNKSKS+QSA+VWDCGSSLYDSFELNSLKRQLDSAIASR+LSMPHLPGR C    
Sbjct: 1   MATPTFNKSKSTQSAVVWDCGSSLYDSFELNSLKRQLDSAIASRTLSMPHLPGRLCTLLP 60

Query: 61  -PPPPPLPPSKRPSKISRSLHKFLRSVFRHKPNSSP-SVEANPERA--DAGYYVLYGDDA 120
            PPPPP PPSKR SKISRSLHKFLRSVF+HK NS P + EANPER   D G+YVLY D+A
Sbjct: 61  PPPPPPPPPSKRSSKISRSLHKFLRSVFKHKTNSIPGTFEANPERVDDDHGFYVLYEDEA 120

Query: 121 DPLSANPEVGFPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           + LSA PEVGFPGFSPEIGSLVRRT SERFTAATSM ISCA
Sbjct: 121 NSLSAVPEVGFPGFSPEIGSLVRRTTSERFTAATSMSISCA 161

[Close]
BLAST of Cp4.1LG13g01140 vs. NCBI nr
Match: gi|764581239|ref|XP_011463971.1| (PREDICTED: uncharacterized protein LOC105351441 [Fragaria vesca subsp. vesca])

HSP 1 Score: 154.8 bits (390), Expect = 1.2e-34
Identity = 88/151 (58.28%), Postives = 107/151 (70.86%), Query Frame = 1 

Query: 9   SKSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCLPPPPPLPPSKR 68
           S++  S  VWDCGSSLYDSFELNS KR+LDSAI+ R++SMPHL  RR   P  P   +K+
Sbjct: 111 SEAKSSRRVWDCGSSLYDSFELNSFKRELDSAISCRTMSMPHLSDRRAPLPQQPTTVAKK 170

Query: 69  PSKISRSLHKFLRSVFRHKPNSSP--SVEANPERADAGYYVLYGDDADPLSANPEV---G 128
           PSK+SRSL+KFLRSVF+ K  S P   V+    +   G+YV+Y D +  L+  PEV    
Sbjct: 171 PSKLSRSLNKFLRSVFKPKTGSGPVFRVQEKSNKTKDGFYVVY-DKSGALTTIPEVVPHE 230

Query: 129 FPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           F GFSPEIGSLVRRT SERFT+  S+GISCA
Sbjct: 231 FSGFSPEIGSLVRRTGSERFTSTASIGISCA 260

[Close]
BLAST of Cp4.1LG13g01140 vs. NCBI nr
Match: gi|566148234|ref|XP_002299484.2| (hypothetical protein POPTR_0001s10440g [Populus trichocarpa])

HSP 1 Score: 149.4 bits (376), Expect = 5.0e-33
Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 1 

Query: 10  KSSQSALVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHLPGRRCLPPPPPLPPSKRP 69
           +++  ALVWDCGSSLYDSFEL S +RQLDSAI SR+LSMPH P R+ L  PP  PP K+P
Sbjct: 33  QANNKALVWDCGSSLYDSFELKSFERQLDSAINSRTLSMPHFPDRQVLTTPP--PPPKKP 92

Query: 70  SKISRSLHKFLRSVFRHKPNSSPSVEANPERADAGYYVLYGDDADPLSANPEV---GFPG 129
           SKISRSL+KFL+S+F+ K NSS       ER    YYV+Y D +  L+  PEV    F G
Sbjct: 93  SKISRSLNKFLKSMFKSKQNSSTMFRVQ-ERLQDEYYVIY-DKSGALTTIPEVPEIDFGG 152

Query: 130 FSPEIGSLVRRTASERFTAATSMGIS 153
           FSPEI SLVR+T S+RFTAA S+GIS
Sbjct: 153 FSPEINSLVRKTVSDRFTAA-SIGIS 173

[Close]
BLAST of Cp4.1LG13g01140 vs. NCBI nr
Match: gi|661884218|emb|CDP12135.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 145.6 bits (366), Expect = 7.2e-32
Identity = 98/177 (55.37%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 2   ASPKFNKSKSSQSA----------LVWDCGSSLYDSFELNSLKRQLDSAIASRSLSMPHL 61
           A P  N++K S+SA          L+WDCGSSLYDSFEL S +RQLDSAI SR+LSMPHL
Sbjct: 50  ARPLENQAKISKSAEQPADAAADPLLWDCGSSLYDSFELKSFERQLDSAIHSRTLSMPHL 109

Query: 62  PGRRCL--------PPPPPLPPSKRPSKISRSLHKFLRSVFRHKP---NSSPSVEANPER 121
             RR +        P  PP P SK+ SKISRS HKFLRSVF+ K    N +P   AN ++
Sbjct: 110 SDRRVIDGGNHHQPPSQPPQPMSKKSSKISRSFHKFLRSVFKPKAQNGNKNPFFPANEQQ 169

Query: 122 ADA-GYYVLYG-DDADPLSANPEVG-FPGFSPEIGSLVRRTASERFTAATSMGISCA 155
           A   G+YV+Y  D +  LS  PEV  F G SPE  SLVRRTAS+RF A +SMGISCA
Sbjct: 170 ATRDGFYVVYDIDKSGALSTIPEVSEFDGLSPEYKSLVRRTASDRF-AVSSMGISCA 225

The following BLAST results are available for this feature:
BLAST of Cp4.1LG13g01140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG13g01140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMF8_CUCSA5.2e-6180.75Uncharacterized protein OS=Cucumis sativus GN=Csa_5G150470 PE=4 SV=1[more]
B9GL78_POPTR3.5e-3360.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s10440g PE=4 SV=2[more]
A0A068UUB6_COFCA5.0e-3255.37Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00035529001 PE=4 SV=1[more]
A0A061G5W8_THECC2.5e-3154.60Uncharacterized protein OS=Theobroma cacao GN=TCM_016419 PE=4 SV=1[more]
K4CPK5_SOLLC7.3e-3155.63Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG13g01140 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G41810.13.3e-2745.51 unknown protein[more]
AT1G64340.17.0e-1741.67 unknown protein[more]
BLAST of Cp4.1LG13g01140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074026|ref|XP_008437381.1|2.5e-6484.18PREDICTED: uncharacterized protein LOC103482814 [Cucumis melo][more]
gi|778699401|ref|XP_011654703.1|7.4e-6180.75PREDICTED: uncharacterized protein LOC105435436 [Cucumis sativus][more]
gi|764581239|ref|XP_011463971.1|1.2e-3458.28PREDICTED: uncharacterized protein LOC105351441 [Fragaria vesca subsp. vesca][more]
gi|566148234|ref|XP_002299484.2|5.0e-3360.96hypothetical protein POPTR_0001s10440g [Populus trichocarpa][more]
gi|661884218|emb|CDP12135.1|7.2e-3255.37unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG13g01140.1Cp4.1LG13g01140.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33978FAMILY NOT NAMEDcoord: 7..153
score: 1.5
NoneNo IPR availablePANTHERPTHR33978:SF4SUBFAMILY NOT NAMEDcoord: 7..153
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG13g01140Cucsa.303790Cucumber (Gy14) v1cgycpeB0789
Cp4.1LG13g01140CmaCh15G012730Cucurbita maxima (Rimu)cmacpeB305
Cp4.1LG13g01140CmoCh15G013420Cucurbita moschata (Rifu)cmocpeB268
Cp4.1LG13g01140CmoCh04G007440Cucurbita moschata (Rifu)cmocpeB661
Cp4.1LG13g01140Cla011381Watermelon (97103) v1cpewmB183
Cp4.1LG13g01140Csa5G150470Cucumber (Chinese Long) v2cpecuB174
Cp4.1LG13g01140MELO3C005742Melon (DHL92) v3.5.1cpemeB156
Cp4.1LG13g01140ClCG01G001990Watermelon (Charleston Gray)cpewcgB165
Cp4.1LG13g01140CSPI05G04730Wild cucumber (PI 183967)cpecpiB176
Cp4.1LG13g01140Lsi09G001840Bottle gourd (USVL1VR-Ls)cpelsiB131
Cp4.1LG13g01140Lsi07G007080Bottle gourd (USVL1VR-Ls)cpelsiB157
Cp4.1LG13g01140MELO3C005742.2Melon (DHL92) v3.6.1cpemedB183
Cp4.1LG13g01140CsaV3_5G002120Cucumber (Chinese Long) v3cpecucB0209
Cp4.1LG13g01140CsaV3_4G006460Cucumber (Chinese Long) v3cpecucB0207
Cp4.1LG13g01140Bhi01G002285Wax gourdcpewgoB0245
Cp4.1LG13g01140CsGy5G002010Cucumber (Gy14) v2cgybcpeB597
Cp4.1LG13g01140Carg21271Silver-seed gourdcarcpeB0502
Cp4.1LG13g01140Carg13059Silver-seed gourdcarcpeB0056
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG13g01140Cp4.1LG01g00270Cucurbita pepo (Zucchini)cpecpeB206
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG13g01140Cucurbita pepo (Zucchini)cpecpeB196
Cp4.1LG13g01140Wild cucumber (PI 183967)cpecpiB175
Cp4.1LG13g01140Silver-seed gourdcarcpeB0837
Cp4.1LG13g01140Silver-seed gourdcarcpeB1271
Cp4.1LG13g01140Wax gourdcpewgoB0222