Lsi06G012670 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G012670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_45
Location	chr06 : 23248468 .. 23248923 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGGTGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGATGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGTTTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATGAGTAA

mRNA sequence

ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGGTGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGATGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGTTTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATGAGTAA

Coding sequence (CDS)

ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGGTGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGATGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGTTTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATGAGTAA

Protein sequence

MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

Homology

[Close]

BLAST of Lsi06G012670 vs. TrEMBL
Match: A0A0A0LV48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025240 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-63
Identity = 122/151 (80.79%), Postives = 138/151 (91.39%), Query Frame = 1


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRSPL+D KIDAPRE+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF
Sbjct: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           A+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKAAS DFTDGSVGP  + +  H+  NDV
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE-ANDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
           A  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Sbjct: 121 AAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of Lsi06G012670 vs. TrEMBL
Match: A0A022PV89_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015404mg PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.4e-26
Identity = 71/156 (45.51%), Postives = 100/156 (64.10%), Query Frame = 1


Query: 1   MARKVLLRSPAM-RHRSPLKDEKI----DAPREKRQFAEVAGGSAAECTAICCCCPWTVL 60
           M R++ +RSPA+ R +SPL +          R K + AEVAGG+AAEC A+CCCCP  ++
Sbjct: 1   MTRQMTMRSPALDRRQSPLLERSDYSSRGGARNKVRLAEVAGGTAAECAAVCCCCPCGLV 60

Query: 61  NIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHK 120
           N+++ AVY++PAGLCRKA+ +RKRHR++ KK L+ QRK    D  +  + P T       
Sbjct: 61  NLIVLAVYKLPAGLCRKAL-RRKRHRRLLKKGLLPQRK-CGCDENEFQIHPVTSPLAMVT 120

Query: 121 TTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
               V+D  ++ +LE+EMW +F   GFWRS SQR E
Sbjct: 121 ALESVSDDSEVIELEKEMWDKFYGAGFWRSPSQRTE 154

[Close]

BLAST of Lsi06G012670 vs. TrEMBL
Match: A0A0V0HW38_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-23
Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 1


Query: 1   MARKVLLRSPAM----RHRSPLKDEKIDAPR---EKRQFAEVAGGSAAECTAICCCCPWT 60
           M ++++LR+P+     R R PL   +  + R    K + AEVAGG+AAEC A+CCCCP  
Sbjct: 1   MTKQIVLRAPSSLSIDRRRQPLLSNQDTSSRGGVRKARLAEVAGGTAAECAAVCCCCPCG 60

Query: 61  VLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGP--ATESF 120
           ++N+++ AVY++PAGLCRKA+ +++R R+MKKK L  Q + +S D ++ S+ P     + 
Sbjct: 61  LVNLLVMAVYKLPAGLCRKALRRKRRRRQMKKKIL--QSQCSSCDDSELSIHPIDGATTL 120

Query: 121 EAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
                 N +   +D+  LE+EMW +F   GFWRS SQ+ +
Sbjct: 121 AVVDGGNSLKSDKDVVALEKEMWSKFYGAGFWRSPSQKSD 158

[Close]

BLAST of Lsi06G012670 vs. TrEMBL
Match: M1BXB9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400021375 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.2e-23
Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 1


Query: 1   MARKVLLRSPAM----RHRSPLKDEKIDAPR---EKRQFAEVAGGSAAECTAICCCCPWT 60
           M ++++LR+P+     R R PL   +  + R    K + AEVAGG+AAEC A+CCCCP  
Sbjct: 1   MTKQIVLRAPSSLSIDRRRQPLLSNQDTSSRGGVRKARLAEVAGGTAAECAAVCCCCPCG 60

Query: 61  VLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGP--ATESF 120
           ++N+++ AVY++PAGLCRKA+ +++R R+MKKK L  Q + +S D ++ S+ P     + 
Sbjct: 61  LVNLLVMAVYKLPAGLCRKALRRKRRRRQMKKKIL--QSQCSSCDDSELSIHPIDGATTL 120

Query: 121 EAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
                 N +   +D+  LE+EMW +F   GFWRS SQ+ +
Sbjct: 121 AVVDGGNSLKSDKDVVALEKEMWSKFYGGGFWRSPSQKSD 158

[Close]

BLAST of Lsi06G012670 vs. TrEMBL
Match: K4ASP5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.0e-22
Identity = 63/160 (39.38%), Postives = 98/160 (61.25%), Query Frame = 1


Query: 1   MARKVLLRSPAM----RHRSPLKDEKIDAPR---EKRQFAEVAGGSAAECTAICCCCPWT 60
           M ++++LR+P+     R R PL   +  + R    K + AEVAGG+ AEC A+CCCCP  
Sbjct: 1   MTKQIVLRAPSSLSIDRRRQPLLSNQDTSSRGGVRKARLAEVAGGTTAECAAVCCCCPCG 60

Query: 61  VLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVG--PATESF 120
           ++N+++ A+Y++PAGLCRKA+ +++R R MKKK L  Q + +S D +D S+       + 
Sbjct: 61  LVNLLVMAIYKLPAGLCRKALRRKRRRRLMKKKIL--QSQCSSCDDSDLSIHHIDGATTL 120

Query: 121 EAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
                 N +   +D+  LE+EMW +F   GFWRS SQ+ +
Sbjct: 121 AVVDGGNSLKSDKDVVALEKEMWSKFYGAGFWRSPSQKSD 158

[Close]

BLAST of Lsi06G012670 vs. TAIR10
Match: AT2G27180.1 (AT2G27180.1 unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-18
Identity = 57/166 (34.34%), Postives = 86/166 (51.81%), Query Frame = 1


Query: 1   MARKVLLRSP--------AMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPW 60
           M R V+L+SP         MR+  P         +E+R+  EVAGG+AAEC A+ CCCP 
Sbjct: 1   MTRHVILKSPLLVSSEESTMRNSPP---STTSLSKERRKVGEVAGGAAAECAAVWCCCPC 60

Query: 61  TVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFE 120
            V+N+++ AVY++PA +C+KA  + KR R  +K++ +     A     +GS         
Sbjct: 61  AVVNLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATA-----EGSESTVHARLN 120

Query: 121 AHKTTNDV---------ADVEDLKKLEEEMWGRFNQTGFWRSSSQR 150
               T ++          ++ D+ +LE EM  RF   GFWRS SQ+
Sbjct: 121 EEDLTAEIVFEECHVSGGELNDVVRLENEMLDRFYGAGFWRSPSQK 158

[Close]

BLAST of Lsi06G012670 vs. TAIR10
Match: AT5G06380.1 (AT5G06380.1 unknown protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.6e-16
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 1


Query: 33  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQR 92
           AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCR+A+ + +R R  KK+++   R
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGR 83

Query: 93  KAASMDFTDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQ 149
           +      +  +V P     E  +   +  + E +  LE+EMW RF   GFWRS SQ
Sbjct: 84  EFGRGGSSQFAVHPLESRDEEEE---EEEEDEAVIALEKEMWSRFYSGGFWRSLSQ 136

[Close]

BLAST of Lsi06G012670 vs. TAIR10
Match: AT3G11690.1 (AT3G11690.1 unknown protein)

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-14
Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 1


Query: 15  RSPLKDEKIDAPREKRQF-----AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGL 74
           R PL    + +P  +        AE  GG+ A C A+ CCCP  ++N+++ A+Y++P G+
Sbjct: 32  RQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGI 91

Query: 75  CRKAMNKRKR-----------------HRKMKKKYLIQQRKAASMDFTDGSVGPATESFE 134
           CR+A+  R+R                 + +M++ +   +     +D  D S     ++F 
Sbjct: 92  CRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFL 151

Query: 135 AHK----------TTNDVADVED--LKKLEEEMWGRFNQTGFWRSSSQR 150
             K          TT +  D +D  +  LE+EMW RF   GFWRS SQR
Sbjct: 152 DLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQR 200

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: gi|700208795|gb|KGN63891.1| (hypothetical protein Csa_1G025240 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 2.0e-63
Identity = 122/151 (80.79%), Postives = 138/151 (91.39%), Query Frame = 1


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRSPL+D KIDAPRE+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF
Sbjct: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           A+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKAAS DFTDGSVGP  + +  H+  NDV
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE-ANDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
           A  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Sbjct: 121 AAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: gi|848931198|ref|XP_012828685.1| (PREDICTED: uncharacterized protein LOC105949925 [Erythranthe guttata])

HSP 1 Score: 126.7 bits (317), Expect = 3.4e-26
Identity = 71/156 (45.51%), Postives = 100/156 (64.10%), Query Frame = 1


Query: 1   MARKVLLRSPAM-RHRSPLKDEKI----DAPREKRQFAEVAGGSAAECTAICCCCPWTVL 60
           M R++ +RSPA+ R +SPL +          R K + AEVAGG+AAEC A+CCCCP  ++
Sbjct: 1   MTRQMTMRSPALDRRQSPLLERSDYSSRGGARNKVRLAEVAGGTAAECAAVCCCCPCGLV 60

Query: 61  NIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHK 120
           N+++ AVY++PAGLCRKA+ +RKRHR++ KK L+ QRK    D  +  + P T       
Sbjct: 61  NLIVLAVYKLPAGLCRKAL-RRKRHRRLLKKGLLPQRK-CGCDENEFQIHPVTSPLAMVT 120

Query: 121 TTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
               V+D  ++ +LE+EMW +F   GFWRS SQR E
Sbjct: 121 ALESVSDDSEVIELEKEMWDKFYGAGFWRSPSQRTE 154

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: gi|565363405|ref|XP_006348427.1| (PREDICTED: uncharacterized protein LOC102594000 [Solanum tuberosum])

HSP 1 Score: 115.9 bits (289), Expect = 6.0e-23
Identity = 65/160 (40.62%), Postives = 101/160 (63.12%), Query Frame = 1


Query: 1   MARKVLLRSPAM----RHRSPLKDEKIDAPR---EKRQFAEVAGGSAAECTAICCCCPWT 60
           M ++++LR+P+     R R PL   +  + R    K + AEVAGG+AAEC A+CCCCP  
Sbjct: 1   MTKQIVLRAPSSLSIDRRRQPLLSNQDTSSRGGVRKARLAEVAGGTAAECAAVCCCCPCG 60

Query: 61  VLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGP--ATESF 120
           ++N+++ AVY++PAGLCRKA+ +++R R+MKKK L  Q + +S D ++ S+ P     + 
Sbjct: 61  LVNLLVMAVYKLPAGLCRKALRRKRRRRQMKKKIL--QSQCSSCDDSELSIHPIDGATTL 120

Query: 121 EAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
                 N +   +D+  LE+EMW +F   GFWRS SQ+ +
Sbjct: 121 AVVDGGNSLKSDKDVVALEKEMWSKFYGGGFWRSPSQKSD 158

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: gi|969997249|ref|XP_015066929.1| (PREDICTED: uncharacterized protein LOC107011793 [Solanum pennellii])

HSP 1 Score: 114.0 bits (284), Expect = 2.3e-22
Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 1


Query: 1   MARKVLLRSPAM----RHRSPLKDEKIDAPR---EKRQFAEVAGGSAAECTAICCCCPWT 60
           M ++++LR+P+     R R PL   +  + R    K + AEVAGG+ AEC A+CCCCP  
Sbjct: 1   MTKQIVLRAPSSLSIDRRRQPLLSNQDTSSRGGVRKARLAEVAGGTTAECAAVCCCCPCG 60

Query: 61  VLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGP--ATESF 120
           ++N+++ A+Y++PAGLCRKA+ +++R R MKKK L  Q + ++ D +D S+ P     + 
Sbjct: 61  LVNLLVMAIYKLPAGLCRKALRRKRRRRLMKKKIL--QSQCSNCDDSDLSIHPIDGATTL 120

Query: 121 EAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
                 N +   +D+  LE+EMW +F   GFWRS SQ+ +
Sbjct: 121 AVVDGGNSLKSDKDVVALEKEMWSKFYGAGFWRSPSQKSD 158

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: gi|698588209|ref|XP_009779394.1| (PREDICTED: uncharacterized protein LOC104228610 [Nicotiana sylvestris])

HSP 1 Score: 112.8 bits (281), Expect = 5.1e-22
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 1


Query: 1   MARKVLLRSPAM----RHRSPLKDEKIDAPR----EKRQFAEVAGGSAAECTAICCCCPW 60
           M ++++LR+P+     R R PL   +  + R    +  +FAEVAGG+ AEC A+CCCCP 
Sbjct: 1   MTKQIVLRAPSSLSVDRRRQPLLSGQDSSSRGGVRKAARFAEVAGGTTAECAAVCCCCPC 60

Query: 61  TVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAA----SMDFTDGSVGPAT 120
            ++N+++ AVY++PAGLCRKA+ K++R R MKK  L++   A      +  T  +VG   
Sbjct: 61  GLVNLLVLAVYKLPAGLCRKALRKKRRRRLMKKGLLVRSEDAELSIHPIGTTPLAVGDGG 120

Query: 121 ESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
            S E+ K         D+  LE+EMW +F   GFWRS SQR +
Sbjct: 121 NSLESDK---------DVVALEKEMWNKFYGAGFWRSPSQRSD 154

The following BLAST results are available for this feature:

BLAST of Lsi06G012670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G012670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV48_CUCSA	1.4e-63	80.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025240 PE=4 SV=1	[more]
A0A022PV89_ERYGU	2.4e-26	45.51	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015404mg PE=4 SV=1	[more]
A0A0V0HW38_SOLCH	2.5e-23	40.63	Putative ovule protein OS=Solanum chacoense PE=4 SV=1	[more]
M1BXB9_SOLTU	4.2e-23	40.63	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400021375 PE=4 SV=1	[more]
K4ASP5_SOLLC	6.0e-22	39.38	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of Lsi06G012670 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27180.1	2.1e-18	34.34	unknown protein	[more]
AT5G06380.1	2.6e-16	38.79	unknown protein	[more]
AT3G11690.1	5.4e-14	29.59	unknown protein	[more]

BLAST of Lsi06G012670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208795\|gb\|KGN63891.1\|	2.0e-63	80.79	hypothetical protein Csa_1G025240 [Cucumis sativus]	[more]
gi\|848931198\|ref\|XP_012828685.1\|	3.4e-26	45.51	PREDICTED: uncharacterized protein LOC105949925 [Erythranthe guttata]	[more]
gi\|565363405\|ref\|XP_006348427.1\|	6.0e-23	40.63	PREDICTED: uncharacterized protein LOC102594000 [Solanum tuberosum]	[more]
gi\|969997249\|ref\|XP_015066929.1\|	2.3e-22	39.38	PREDICTED: uncharacterized protein LOC107011793 [Solanum pennellii]	[more]
gi\|698588209\|ref\|XP_009779394.1\|	5.1e-22	40.49	PREDICTED: uncharacterized protein LOC104228610 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G012670.1	Lsi06G012670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264	FAMILY NOT NAMED	coord: 12..149 score: 9.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G012670	Csa1G025240	Cucumber (Chinese Long) v2	culsiB071
Lsi06G012670	CSPI01G04500	Wild cucumber (PI 183967)	cpilsiB071
Lsi06G012670	Cucsa.111710	Cucumber (Gy14) v1	cgylsiB156
Lsi06G012670	CmaCh11G003210	Cucurbita maxima (Rimu)	cmalsiB143
Lsi06G012670	CmoCh11G003260	Cucurbita moschata (Rifu)	cmolsiB128
Lsi06G012670	Cla018909	Watermelon (97103) v1	lsiwmB414
Lsi06G012670	MELO3C017376	Melon (DHL92) v3.5.1	lsimeB397
Lsi06G012670	ClCG06G014180	Watermelon (Charleston Gray)	lsiwcgB372
Lsi06G012670	MELO3C017376.2	Melon (DHL92) v3.6.1	lsimedB419
Lsi06G012670	Cla97C06G123640	Watermelon (97103) v2	lsiwmbB374
Lsi06G012670	Cp4.1LG04g13610	Cucurbita pepo (Zucchini)	cpelsiB556
Lsi06G012670	CsGy1G004400	Cucumber (Gy14) v2	cgyblsiB068
Lsi06G012670	Carg09092	Silver-seed gourd	carlsiB540
Lsi06G012670	CsaV3_1G004500	Cucumber (Chinese Long) v3	cuclsiB082

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G012670	Cucurbita maxima (Rimu)	cmalsiB075
Lsi06G012670	Cucurbita moschata (Rifu)	cmolsiB061
Lsi06G012670	Cucurbita pepo (Zucchini)	cpelsiB301
Lsi06G012670	Silver-seed gourd	carlsiB726
Lsi06G012670	Wax gourd	lsiwgoB519