CSPI01G04500 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGACAGAGCAAATTTCTTTTCTTAGAAAAATTCCAAAAATTCTTCGTCTCTTTCTTTCTTCCTTCTTCCTTCTTCATCTCTCTCTGCTTAAATTCTCATAACAATGGCTGTTAAAGGAAGATGAAAGTGAAATGAAATTACTACGCGTTTATTCCGATATTTTCTCCTCTGTTTCTCTTTAACAATCCATCCATTTCCCCCCGTCTTTTTCGCTCTTTCAATGGCGATTACATATCTTCCTTTTCTCAACTGATCAACCCCCCTTTTTCGTTCTCTTTTAACTCCTCTTCTTCCTTTCATCTTTCATTTCCCACCCATTTCTTTCCACCACCGCCGCACCGGTGGCTCTCTCTTTCTCCGAACAAATGCGTTGCCAAAACCAATTAGAAATCCTATAACCATTCTCCATCTCTCCTATGGGATCTTCCGGTTCCCTCTAACCCAATCGGAACCCTATCCCAATTTTATTCGGATTTCTTTATTTTTTCCTCTCATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCATAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACGGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAAAAATATTATATAAACAAAGAAACACAAAACAAAATGTTCAAAATGTTCAAAATGTTTCCTTTTTC ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCATAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACGGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCATAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACGGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA
BLAST of CSPI01G04500 vs. TrEMBL
Match: A0A0A0LV48_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025240 PE=4 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 3.7e-80 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of CSPI01G04500 vs. TrEMBL
Match: A0A0V0HW38_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.7e-24 Identity = 69/159 (43.40%), Postives = 103/159 (64.78%), Query Frame = 1
BLAST of CSPI01G04500 vs. TrEMBL
Match: A0A022PV89_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015404mg PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 2.2e-24 Identity = 68/154 (44.16%), Postives = 99/154 (64.29%), Query Frame = 1
BLAST of CSPI01G04500 vs. TrEMBL
Match: M1BXB9_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400021375 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.9e-24 Identity = 69/159 (43.40%), Postives = 103/159 (64.78%), Query Frame = 1
BLAST of CSPI01G04500 vs. TrEMBL
Match: K4ASP5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 3.2e-23 Identity = 69/159 (43.40%), Postives = 100/159 (62.89%), Query Frame = 1
BLAST of CSPI01G04500 vs. TAIR10
Match: AT2G27180.1 (AT2G27180.1 unknown protein) HSP 1 Score: 92.4 bits (228), Expect = 2.5e-19 Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = 1
BLAST of CSPI01G04500 vs. TAIR10
Match: AT5G06380.1 (AT5G06380.1 unknown protein) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 1
BLAST of CSPI01G04500 vs. TAIR10
Match: AT3G11690.1 (AT3G11690.1 unknown protein) HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15 Identity = 58/170 (34.12%), Postives = 79/170 (46.47%), Query Frame = 1
BLAST of CSPI01G04500 vs. NCBI nr
Match: gi|700208795|gb|KGN63891.1| (hypothetical protein Csa_1G025240 [Cucumis sativus]) HSP 1 Score: 305.4 bits (781), Expect = 5.3e-80 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1
BLAST of CSPI01G04500 vs. NCBI nr
Match: gi|848931198|ref|XP_012828685.1| (PREDICTED: uncharacterized protein LOC105949925 [Erythranthe guttata]) HSP 1 Score: 120.2 bits (300), Expect = 3.2e-24 Identity = 68/154 (44.16%), Postives = 99/154 (64.29%), Query Frame = 1
BLAST of CSPI01G04500 vs. NCBI nr
Match: gi|565363405|ref|XP_006348427.1| (PREDICTED: uncharacterized protein LOC102594000 [Solanum tuberosum]) HSP 1 Score: 119.8 bits (299), Expect = 4.2e-24 Identity = 69/159 (43.40%), Postives = 103/159 (64.78%), Query Frame = 1
BLAST of CSPI01G04500 vs. NCBI nr
Match: gi|969997249|ref|XP_015066929.1| (PREDICTED: uncharacterized protein LOC107011793 [Solanum pennellii]) HSP 1 Score: 118.6 bits (296), Expect = 9.3e-24 Identity = 69/159 (43.40%), Postives = 101/159 (63.52%), Query Frame = 1
BLAST of CSPI01G04500 vs. NCBI nr
Match: gi|698588209|ref|XP_009779394.1| (PREDICTED: uncharacterized protein LOC104228610 [Nicotiana sylvestris]) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-23 Identity = 65/156 (41.67%), Postives = 97/156 (62.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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