CsGy1G004400 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G004400
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	hypothetical protein
Location	Chr1 : 2809506 .. 2809958 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCACAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACTGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA

mRNA sequence

ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCACAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACTGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA

Coding sequence (CDS)

ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCACAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACTGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA

Protein sequence

MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILIFAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK

Homology

[Close]

BLAST of CsGy1G004400 vs. NCBI nr
Match: KGN63891.1 (hypothetical protein Csa_1G025240 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 1.8e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILIF 60
           MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILIF
Sbjct: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILIF 60

Query: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVA 120
           AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVA
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVA 120

Query: 121 AGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 151
           AGEDLKKLEDEMWGRFSQTGFWRSSSQRHK
Sbjct: 121 AGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of CsGy1G004400 vs. NCBI nr
Match: XP_022933995.1 (uncharacterized protein LOC111441234 [Cucurbita moschata])

HSP 1 Score: 190.3 bits (482), Expect = 4.8e-45
Identity = 101/152 (66.45%), Postives = 121/152 (79.61%), Query Frame = 0


Query: 1   MTRKVLLRSAAI-RHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILI 60
           M RKVLLRS AI R  S  +  K DA R++RQFAE+AGGSA       XXXPWTV+N++I
Sbjct: 1   MARKVLLRSQAIERQSSSQKSEKSDASRDKRQFAELAGGSAXXXXXXXXXXPWTVMNLVI 60

Query: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGY-GTHEAND 120
           FA+YRMP GLCRKA+NRRKRHRR+KRK LIQQRKAAS++F D SV P ++ +  T +AND
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRHRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VAAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 151
            A GED+ KLE+EMWGRF+QTGFWRSSSQRH+
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of CsGy1G004400 vs. NCBI nr
Match: XP_023531763.1 (uncharacterized protein LOC111793918 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43
Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0


Query: 1   MTRKVLLRSAAI-RHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILI 60
           M RKVLLRS AI R  S  +  K DA R++R FAE+AGGSA       XXXPWTV+N++I
Sbjct: 1   MARKVLLRSQAIDRQSSSQKSEKSDASRDKRLFAELAGGSAXXXXXXXXXXPWTVMNLVI 60

Query: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGY-GTHEAND 120
           FA+YRMP GLCRKA+NRRKR RR+KRK LIQQRKAAS++F D SV P ++ +  T +AND
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRQRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VAAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 151
            A GED+ KLE+EMWGRF+QTGFWRSSSQRH+
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of CsGy1G004400 vs. NCBI nr
Match: XP_022134785.1 (uncharacterized protein LOC111006972 [Momordica charantia])

HSP 1 Score: 176.0 bits (445), Expect = 9.4e-41
Identity = 101/153 (66.01%), Postives = 118/153 (77.12%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRH-RSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILI 60
           MT KVLLRS AI H +S L+D K+DAPRERRQFAEVAGGSAAECTA+ XXXP TV+NI+I
Sbjct: 1   MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAIXXXXPLTVMNIVI 60

Query: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGP-IIDGYGTHEAND 120
           FAIY+MPAGLCRKA+  RKRH +MK+K LIQQR+ AS++FTDGS GP  I G+       
Sbjct: 61  FAIYKMPAGLCRKALKSRKRHGKMKKKRLIQQRRGASQEFTDGSEGPGGIGGFDQVPPQV 120

Query: 121 VAA------GEDLKKLEDEMWGRFSQTGFWRSS 146
             A       +DL  LE+EMWG+FSQTGFWRSS
Sbjct: 121 PGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSS 153

[Close]

BLAST of CsGy1G004400 vs. NCBI nr
Match: XP_022943329.1 (uncharacterized protein LOC111448127 [Cucurbita moschata])

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRHRSP-LRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILI 60
           M + VLLRS     + P L D   +  +E+ +FAEVAGG+AAEC A+C   P +++N+LI
Sbjct: 1   MNQNVLLRSPPETRQQPLLTDKSPNRLKEKPRFAEVAGGTAAECAAICCCFPCSMMNLLI 60

Query: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDG----YGTHE 120
             +Y++P GLC+KA N+R      KR+++ ++ KAA+   T G  GP  DG    +G   
Sbjct: 61  LTVYKVPVGLCKKAWNKRG-----KRRHITKRNKAAAGGATVGKEGPKHDGEKEDWGESL 120

Query: 121 ANDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQR 149
            +   + ED+ +LE EMW +F  TGFWR+ SQR
Sbjct: 121 PSSYLSSEDV-ELEKEMWDQFYGTGFWRTPSQR 147

[Close]

BLAST of CsGy1G004400 vs. TAIR10
Match: AT5G06380.1 (unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 4.7e-10
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 45  AVCXXXPWTVLNILIFAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSV 104
           A+C   P +V+N+++ A+Y++P GLCR+AI R +R R  K++++   R+      +  +V
Sbjct: 36  ALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGREFGRGGSSQFAV 95

Query: 105 GPIIDGYGTHEANDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQ 148
            P+                    LE EMW RF   GFWRS SQ
Sbjct: 96  HPLES--RXXXXXXXXXXXXXXALEKEMWSRFYSGGFWRSLSQ 136

[Close]

BLAST of CsGy1G004400 vs. TAIR10
Match: AT3G11690.1 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.3e-09
Identity = 46/139 (33.09%), Postives = 64/139 (46.04%), Query Frame = 0


Query: 41  AECTAVCXXXPWTVLNILIFAIYRMPAGLCRKAINRRKRHRRMKRKYL------------ 100
           A C AV    P  ++N+L+ AIY++P G+CR+AI  R+R + +K   L            
Sbjct: 63  ASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLPTDGKNERM 122

Query: 101 ---IQQRKAA-----SEDFTDGS----------VG-PIIDGYGTHEANDVAAGEDLKKLE 149
               Q  + A     S+D +D            +G  +  G+ T E  D    E +  LE
Sbjct: 123 QRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETD-EDDEAVLALE 182

[Close]

BLAST of CsGy1G004400 vs. TAIR10
Match: AT2G27180.1 (unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06
Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 56  NILIFAIYRMPAGLCRKAINRRKRHRRMKRKY--LIQQRKAASEDFTDGSVG-PIIDGYG 115
           N+++ A+Y++PA +C+KA  R KR R  ++++  L       SE      +    +    
Sbjct: 61  NLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATAEGSESTVHARLNEEDLTAEI 120

Query: 116 THEANDVAAGE--DLKKLEDEMWGRFSQTGFWRSSSQR 149
             E   V+ GE  D+ +LE+EM  RF   GFWRS SQ+
Sbjct: 121 VFEECHVSGGELNDVVRLENEMLDRFYGAGFWRSPSQK 158

[Close]

BLAST of CsGy1G004400 vs. TrEMBL
Match: tr|A0A0A0LV48|A0A0A0LV48_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 1.2e-76
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILIF 60
           MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILIF
Sbjct: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILIF 60

Query: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVA 120
           AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVA
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVA 120

Query: 121 AGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 151
           AGEDLKKLEDEMWGRFSQTGFWRSSSQRHK
Sbjct: 121 AGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of CsGy1G004400 vs. TrEMBL
Match: tr|A0A1R3I398|A0A1R3I398_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_25368 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 62/153 (40.52%), Postives = 91/153 (59.48%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRHRSPLR-DGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNILI 60
           M+R+VLLRS  +R   P       +A R+ ++F EVAGG+AAEC AV    P TV+ +LI
Sbjct: 1   MSRQVLLRSPPVRRSQPYTLSDDANATRKGKKFGEVAGGTAAECAAVFCCCPCTVMELLI 60

Query: 61  FAIYRMPAGLCRKAINRRKRHRRMKRKYLI--QQRKAASEDFTDGSVGPII--DGYGTHE 120
             +Y++P GLC+KA  RR+RHR MKR  ++        + +  +  +  ++   G G  +
Sbjct: 61  LGLYKVPTGLCKKAWKRRQRHRLMKRNEVLLGPTMSGPTREEIEAELDRVVGRTGLGMDD 120

Query: 121 ANDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQR 149
            +D +A      +E+EMWGRF  TGFWRS SQ+
Sbjct: 121 QDDGSARS--VDMENEMWGRFYATGFWRSPSQK 151

[Close]

BLAST of CsGy1G004400 vs. TrEMBL
Match: tr|W9QVY0|W9QVY0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017152 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18
Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRHRSPLRDGKIDA-PRERRQFAEVAGGSAAECTAVCXXXPWTVLNILI 60
           M R+V++RS  +  R+PL   K  A  R+RR+  EVAG +AAECTAVCXXX  TV+N+L+
Sbjct: 1   MNRQVVVRSPPLNRRTPLLPEKSAANGRDRRRIGEVAGRTAAECTAVCXXXXCTVVNLLV 60

Query: 61  FAIYRMPAGLCRKAINRRKRHRRM--KRKYLIQQRKAASE------DFTDGSVGPIIDGY 120
            A+Y++P G+CR+A  +R+  R++  KR  L+QQR A  +      +  +  +  + +G 
Sbjct: 61  LALYKVPVGICRRAWAKRRMRRQLLAKRNGLLQQRPAGPDACRSTVEELEAELRRVKEGK 120

Query: 121 --GTHEANDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQR 149
             G +   D A G  +   E+EMW RF  TGFWRS SQR
Sbjct: 121 IDGGNGGGDAAFGA-VDFPEEEMWDRFYNTGFWRSPSQR 158

[Close]

BLAST of CsGy1G004400 vs. TrEMBL
Match: tr|A0A022PV89|A0A022PV89_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015404mg PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18
Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0


Query: 1   MTRKVLLRSAAI-RHRSPLRD----GKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVL 60
           MTR++ +RS A+ R +SPL +          R + + AEVAGG+AAEC    XXXP  ++
Sbjct: 1   MTRQMTMRSPALDRRQSPLLERSDYSSRGGARNKVRLAEVAGGTAAECXXXXXXXPCGLV 60

Query: 61  NILIFAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE 120
           N+++ A+Y++PAGLCRKA+ RRKRHRR+ +K L+ QRK   ++  +  + P+        
Sbjct: 61  NLIVLAVYKLPAGLCRKAL-RRKRHRRLLKKGLLPQRKCGCDE-NEFQIHPVTSPLAMVT 120

Query: 121 A-NDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQR 149
           A   V+   ++ +LE EMW +F   GFWRS SQR
Sbjct: 121 ALESVSDDSEVIELEKEMWDKFYGAGFWRSPSQR 152

[Close]

BLAST of CsGy1G004400 vs. TrEMBL
Match: tr|A0A2I4H6Y4|A0A2I4H6Y4_9ROSI (uncharacterized protein LOC109014056 OS=Juglans regia OX=51240 GN=LOC109014056 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.3e-18
Identity = 67/157 (42.68%), Postives = 89/157 (56.69%), Query Frame = 0


Query: 1   MTRKVLLRSAAIRHRSP--LRDGKIDAPRERRQFAEVAGGSAAECTAVCXXXPWTVLNIL 60
           M R+VL RS A R+R    L D K +  +ERR+  EVAGG+ AEC A+C   P TV+N+L
Sbjct: 1   MNREVLWRSYAGRNRQHPLLADHKENEGKERRRVGEVAGGTTAECAAICCCFPCTVMNLL 60

Query: 61  IFAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEAND 120
           I A+Y++PAGLCRKA  R+K+ +R+K+K        +     +G    ++      E   
Sbjct: 61  ILAVYKVPAGLCRKAW-RKKKLQRLKKKKTTGLLTNSGNKLEEGDNLELVLEL---EMET 120

Query: 121 VAAG-------EDLKKLEDEMWGRFSQTGFWRSSSQR 149
           V  G        D   LE EMW RFSQ GFWRS S+R
Sbjct: 121 VKGGSLIGMNNNDAVNLEKEMWERFSQGGFWRSPSER 153

The following BLAST results are available for this feature:

BLAST of CsGy1G004400 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN63891.1	1.8e-76	100.00	hypothetical protein Csa_1G025240 [Cucumis sativus]	[more]
XP_022933995.1	4.8e-45	66.45	uncharacterized protein LOC111441234 [Cucurbita moschata]	[more]
XP_023531763.1	2.7e-43	65.13	uncharacterized protein LOC111793918 [Cucurbita pepo subsp. pepo]	[more]
XP_022134785.1	9.4e-41	66.01	uncharacterized protein LOC111006972 [Momordica charantia]	[more]
XP_022943329.1	1.9e-20	41.83	uncharacterized protein LOC111448127 [Cucurbita moschata]	[more]

BLAST of CsGy1G004400 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06380.1	4.7e-10	33.98	unknown protein	[more]
AT3G11690.1	2.3e-09	33.09	unknown protein	[more]
AT2G27180.1	1.4e-06	33.67	unknown protein	[more]

BLAST of CsGy1G004400 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G004400 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LV48\|A0A0A0LV48_CUCSA	1.2e-76	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1	[more]
tr\|A0A1R3I398\|A0A1R3I398_9ROSI	1.4e-19	40.52	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_25368 PE=4 SV=1	[more]
tr\|W9QVY0\|W9QVY0_9ROSA	2.0e-18	42.77	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017152 PE=4 SV=1	[more]
tr\|A0A022PV89\|A0A022PV89_ERYGU	2.0e-18	42.21	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015404mg PE...	[more]
tr\|A0A2I4H6Y4\|A0A2I4H6Y4_9ROSI	3.3e-18	42.68	uncharacterized protein LOC109014056 OS=Juglans regia OX=51240 GN=LOC109014056 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G004400.1	CsGy1G004400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33264:SF8	EXPRESSED PROTEIN	coord: 24..149
None	No IPR available	PANTHER	PTHR33264	FAMILY NOT NAMED	coord: 24..149

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G004400	Cla018909	Watermelon (97103) v1	cgybwmB095
CsGy1G004400	Csa1G025240	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G004400	MELO3C017376	Melon (DHL92) v3.5.1	cgybmeB050
CsGy1G004400	ClCG06G014180	Watermelon (Charleston Gray)	cgybwcgB079
CsGy1G004400	CSPI01G04500	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G004400	CmaCh11G003210	Cucurbita maxima (Rimu)	cgybcmaB029
CsGy1G004400	CmoCh11G003260	Cucurbita moschata (Rifu)	cgybcmoB028
CsGy1G004400	Lsi06G012670	Bottle gourd (USVL1VR-Ls)	cgyblsiB068
CsGy1G004400	Cp4.1LG04g13610	Cucurbita pepo (Zucchini)	cgybcpeB127
CsGy1G004400	MELO3C017376.2	Melon (DHL92) v3.6.1	cgybmedB044
CsGy1G004400	CsaV3_1G004500	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G004400	Cla97C06G123640	Watermelon (97103) v2	cgybwmbB077
CsGy1G004400	Carg09092	Silver-seed gourd	carcgybB0594

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G004400	Cucurbita maxima (Rimu)	cgybcmaB006
CsGy1G004400	Cucurbita moschata (Rifu)	cgybcmoB007
CsGy1G004400	Cucurbita pepo (Zucchini)	cgybcpeB055
CsGy1G004400	Bottle gourd (USVL1VR-Ls)	cgyblsiB034
CsGy1G004400	Melon (DHL92) v3.5.1	cgybmeB030
CsGy1G004400	Watermelon (Charleston Gray)	cgybwcgB049
CsGy1G004400	Watermelon (97103) v1	cgybwmB029
CsGy1G004400	Silver-seed gourd	carcgybB0778
CsGy1G004400	Watermelon (97103) v2	cgybwmbB047
CsGy1G004400	Wax gourd	cgybwgoB059
CsGy1G004400	Wax gourd	cgybwgoB075