CsaV3_1G004500 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAGAAGAAAAGAATTATGCGTTATTTGTTGATAAATGACGACAGAGCAAATTTCTTTTCTTAGAAAAATTCCAAAAATTCTTCGTCTCTTTCTTTCTTCCTTCTTCCTTCTTCATCTCTCTCTGCTTAAATTCTCATAACAATGGCTGTTAAAGGAAGATGAAAGTGAAATGAAATTACTACGCGTTTATTCCGATATTTTCTCCTCTGTTTCTCTTTAACAATCCATCCATTTCCCCCCGTCTTTTTCGCTCTTTCAATGGCGATTAGATATCTTCCTTTTCTCAACTGATCAACCCCCCTTTTTCGTTCTCTTTTAACTCCTCTTCTTCCTTTCATCTTTCATTTCCCACCCATTTCTTTCCACCACCGCCGCACCGGTGGCTCTCTCTTTCTCCGAACAAATGCGTTGCCAAAACCAATTAGAAATCCTATAACCATTCTCCATCTCTCCTATGGGATCTTCCGGTTCCCTCTAACCCAATCGGAACCCTATCCCAATTTTATTCGGATTTCTTTATTTTTTCCTCTCATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCACAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACTGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAAAAATATTATATAAACAAAGAAACACAAAACAAAATGTTCAAAATGTTCAAAATGTTTCCTTTTTCTTTTTCTAATTTTCTTTTTTCTTTGTACGTTTAATTTAATATCTTTCATTTCATGTGATTTGGAGAAACTTTTAGCAATACGAACGTGCAATCTTTTATAAGAATTCAAAAGGGTGCGCAGATTATATTTGTAAATATAAGAAAGTTACTCATAATTTAGAGACATTTTTAAAAAATAACCAAATATTAAAACTAAATTTAGCTATATATTTTTCTAAATAGTTTTATTTTCATGAGTTATTTACAATAATGTAAGTTAATTATTAATAATAATACTTTTAAAACCAAACTCGTTTTTTCCATTTAGCTTTTTGTCTTTTAAAAAATTGATTTTCATTTAGTGTAGTATTTTATAATTCTGTCTTCTAACGTCCAGATTAAATTTAATTTTGTAAACTTTGGAAAGAAATTAGTTATAAAATATAGCAAAATTTAAGATGG ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCACAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACTGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA ATGACTCGGAAGGTTCTCCTCCGATCTGCGGCTATCCGTCACAGATCGCCATTACGGGACGGGAAAATCGATGCGCCACGAGAGAGACGGCAGTTCGCGGAAGTAGCCGGTGGGTCAGCGGCGGAATGTACTGCGGTTTGTTGTTGTTGTCCATGGACGGTGTTGAACATCTTGATCTTTGCCATTTACAGGATGCCGGCGGGACTATGCCGGAAAGCGATAAACAGGAGAAAGCGACACCGGAGAATGAAGAGAAAGTATTTGATTCAGCAACGGAAAGCCGCCTCTGAGGATTTTACGGATGGATCGGTGGGGCCCATAATCGATGGCTACGGGACCCACGAAGCGAATGACGTGGCAGCTGGTGAAGACTTGAAGAAGTTAGAAGATGAAATGTGGGGCCGGTTTAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATAAATAA MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILIFAIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHEANDVAAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK
BLAST of CsaV3_1G004500 vs. NCBI nr
Match: KGN63891.1 (hypothetical protein Csa_1G025240 [Cucumis sativus]) HSP 1 Score: 295.4 bits (755), Expect = 1.1e-76 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. NCBI nr
Match: XP_022933995.1 (uncharacterized protein LOC111441234 [Cucurbita moschata]) HSP 1 Score: 191.0 bits (484), Expect = 2.9e-45 Identity = 101/152 (66.45%), Postives = 121/152 (79.61%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. NCBI nr
Match: XP_023531763.1 (uncharacterized protein LOC111793918 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43 Identity = 99/152 (65.13%), Postives = 119/152 (78.29%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. NCBI nr
Match: XP_022134785.1 (uncharacterized protein LOC111006972 [Momordica charantia]) HSP 1 Score: 176.4 bits (446), Expect = 7.3e-41 Identity = 101/153 (66.01%), Postives = 118/153 (77.12%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. NCBI nr
Match: XP_022943329.1 (uncharacterized protein LOC111448127 [Cucurbita moschata]) HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20 Identity = 64/153 (41.83%), Postives = 94/153 (61.44%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TAIR10
Match: AT5G06380.1 (unknown protein) HSP 1 Score: 62.0 bits (149), Expect = 3.6e-10 Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TAIR10
Match: AT3G11690.1 (unknown protein) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09 Identity = 46/139 (33.09%), Postives = 64/139 (46.04%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TAIR10
Match: AT2G27180.1 (unknown protein) HSP 1 Score: 50.4 bits (119), Expect = 1.1e-06 Identity = 33/98 (33.67%), Postives = 52/98 (53.06%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TrEMBL
Match: tr|A0A0A0LV48|A0A0A0LV48_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 7.1e-77 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TrEMBL
Match: tr|A0A1R3I398|A0A1R3I398_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_25368 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 1.0e-19 Identity = 62/153 (40.52%), Postives = 91/153 (59.48%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TrEMBL
Match: tr|W9QVY0|W9QVY0_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017152 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18 Identity = 68/159 (42.77%), Postives = 98/159 (61.64%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TrEMBL
Match: tr|A0A022PV89|A0A022PV89_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a015404mg PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 1.2e-18 Identity = 65/154 (42.21%), Postives = 96/154 (62.34%), Query Frame = 0
BLAST of CsaV3_1G004500 vs. TrEMBL
Match: tr|A0A2I4H6Y4|A0A2I4H6Y4_9ROSI (uncharacterized protein LOC109014056 OS=Juglans regia OX=51240 GN=LOC109014056 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 67/157 (42.68%), Postives = 89/157 (56.69%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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