Lsi06G010680 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G010680
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionSAM domain (Sterile alpha motif) protein, putative
Locationchr06 : 20917442 .. 20918236 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLAKSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPRSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT
Homology
[Close]
BLAST of Lsi06G010680 vs. TrEMBL
Match: A0A0A0LTT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264010 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 2.8e-115
Identity = 218/274 (79.56%), Postives = 233/274 (85.04%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPL+TYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           KSH+HQ   N  L+SAF KTK CLRNCLR+LI P+   EK        +ISPEPP    +
Sbjct: 61  KSHTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPALEK-------PIISPEPPPSSLD 120

Query: 121 EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPL----- 180
           E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKER P      
Sbjct: 121 EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERAPSSPSPS 180

Query: 181 ----MFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRD 240
               MF RSPRTSGPLDGR+SDW+LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGRD
Sbjct: 181 PLPPMFTRSPRTSGPLDGRISDWSLSNKSPKMNGPPQGRMMRLIPPSRSPRVSGPLDGRD 240

Query: 241 GSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           GSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 GSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 266

[Close]
BLAST of Lsi06G010680 vs. TrEMBL
Match: W9RH70_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016186 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-45
Identity = 120/279 (43.01%), Postives = 168/279 (60.22%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+TGLDP   Y+YGL FARN L  +DI  FNH FLQ++GI++AKHRLEILK+A
Sbjct: 1   MDWFSWLSKTGLDPPLIYDYGLAFARNELQYEDIAYFNHEFLQSMGITVAKHRLEILKVA 60

Query: 61  KSHSHQQTHNKS-LLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPE---PPT 120
           K  +     + S L  A +KTK      + K +       K L        S E      
Sbjct: 61  KKENGGNPRSLSRLFLALSKTKKSFGKYISKFVFQDDMSSKDLPDHHYRERSQEHWRGAL 120

Query: 121 VEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLM 180
           + ++    ++++    P  +++ ++LSGPLD R HE+ + ++KSLKLSGPLD K    LM
Sbjct: 121 LRKQRSGDEMRD--NGPGLKNRALALSGPLDSRVHERLISNTKSLKLSGPLDGKLHERLM 180

Query: 181 FP-RSPRT--SGPLDGR-----MSDWALSKSPKLNGPPQGRM--MRLIPPSRSPRVSGPL 240
           +P RSP+   SGPL+GR           ++SP+L+GP  GR+     +  ++SP++SGPL
Sbjct: 181 YPNRSPKLTGSGPLNGRGPLPERLMITTTRSPRLSGPLDGRVHDRIFVTTTKSPKMSGPL 240

Query: 241 DGRDGSPNICCRCNRERIETDD-DYHSLWVSLFYDMKPT 265
           DGR  SP  C    +E+ + D+ D HSLW +LF+DMKPT
Sbjct: 241 DGRVLSPKFCTPYEKEKADVDEFDDHSLWTTLFHDMKPT 277

[Close]
BLAST of Lsi06G010680 vs. TrEMBL
Match: A0A059CKQ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00478 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.2e-41
Identity = 118/281 (41.99%), Postives = 163/281 (58.01%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+  LDP   YEYG +FA N L  +DI  F+H FLQ++GIS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSKGSLDPSLIYEYGRVFALNQLQEEDISYFDHEFLQSMGISVAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLIL------PTARPEKGLFRED--AAVISP 120
           K           L+ AF +TK  + N + KL+         A PE   +RE    A++S 
Sbjct: 61  KKELGGPRPISGLIMAFNRTKRSVGNYISKLVSHDQDKDVKASPEPSRYREQWRGALLSR 120

Query: 121 EPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRK-- 180
           +       E+E+K K ++   RR    ++LSGPLDGR  +K++M+ KS + SGPLD +  
Sbjct: 121 K----HRSEKEMKQKTIVCQDRR---SMTLSGPLDGRVQDKYMMAHKSQQFSGPLDTRAH 180

Query: 181 ERPPLMFPRSPR---TSGPLDGRMSDWAL--SKSPKLNGPPQGRMMRLIPPSRSPRVSGP 240
           ++P    PR P    +SGPLD R+ +  L   +SPKL+G   GR+       RSP++S P
Sbjct: 181 QKPVFALPRCPSPKFSSGPLDARVDEKVLYPMRSPKLSGMLGGRIPERFTVPRSPKLSRP 240

Query: 241 LDGRDGSPNIC-CRCNRERIET-DDDYHSLWVSLFYDMKPT 265
           L+    SP +     N+ +++  + D HSLW  LF DMKPT
Sbjct: 241 LERTAQSPKLLWSDFNKVKMDAYEYDEHSLWAKLFDDMKPT 274

[Close]
BLAST of Lsi06G010680 vs. TrEMBL
Match: A0A067F767_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025779mg PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-41
Identity = 118/279 (42.29%), Postives = 157/279 (56.27%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRT L+P   YEYGL F RN L  +D+  FNH FLQ++GIS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTNLEPSLVYEYGLAFVRNELQKEDLSYFNHEFLQSMGISVAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKS-LLSAFTKTKNCLRNCLRKLILPTA-------RPEKGLFRED--AAVI 120
           +        + S L+SA  KT+  +  CL KLI            PE  L++E    A++
Sbjct: 61  RKEVGVGPKSFSKLVSALNKTRKNIAKCLHKLIFHDVVSIKRLPEPEPTLYQEQCKGAIM 120

Query: 121 SPEPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGR-THEKFVMSSKSLKLSGPLDR 180
           +       + E+E+KV++ +  PRR +K    SGPLDGR   E   ++++SLKLSGPLDR
Sbjct: 121 T----RTYKSEKEIKVEKPVLKPRRIAK----SGPLDGRVAQENLTVANRSLKLSGPLDR 180

Query: 181 KERPPLMFP-RSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDG 240
             +   MF  RSP  SGP+DGRM                         +RSP++SGPLD 
Sbjct: 181 SMQERAMFTYRSPILSGPIDGRMY-----------------------ANRSPKLSGPLDR 240

Query: 241 RDGSPNICCRCNRERIETDD---DYHSLWVSLFYDMKPT 265
           R  SP +    ++ER+       D  +LW +LF D+KPT
Sbjct: 241 RPPSPRVYADSSKERLSGGGGGFDDQTLWATLFQDLKPT 248

[Close]
BLAST of Lsi06G010680 vs. TrEMBL
Match: D7T4Z0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00550 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.7e-41
Identity = 117/270 (43.33%), Postives = 156/270 (57.78%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+T L+P  TYEYGL FARN L  +D+  FNH FLQ++GIS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSKTDLEPSLTYEYGLAFARNELQEEDVVHFNHEFLQSMGISVAKHRLEILKLA 60

Query: 61  KSHSHQQTHN--KSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVE 120
           K  S ++ HN    LL   +K K     C+ KL           F  D+A  SP P +  
Sbjct: 61  KKESGER-HNTLSGLLQVISKAKRSFAKCVTKL----------AFHGDSA-RSPLPISTS 120

Query: 121 EEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLD--RKERPPLM 180
            +     V  + +P    S+   LSGPLD R H++   +++S  LSGPLD   +ER P +
Sbjct: 121 CQGSWRGVL-LSRPLDATSRSPRLSGPLDRRVHDRSRFTNRSPNLSGPLDGRAQERMPSI 180

Query: 181 FPRSPRTSGPLDGRMSDWALS--KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPN 240
             RSP  S  +DGR  +   +  +   ++GP  GRM     P+RSPR+SGPL+GR     
Sbjct: 181 ANRSPIVSRAVDGRAQEILRTPYRGRSVSGPQDGRMPEGNRPNRSPRLSGPLEGR----- 240

Query: 241 ICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
                ++E+IE  D Y S+W ++F DMKPT
Sbjct: 241 -AMGLDKEKIEGVDGYDSIWATMFQDMKPT 251

[Close]
BLAST of Lsi06G010680 vs. TAIR10
Match: AT2G12462.1 (AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1))

HSP 1 Score: 128.6 bits (322), Expect = 5.5e-30
Identity = 99/285 (34.74%), Postives = 149/285 (52.28%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  L  +DI  FNH+FL+ +G+++ KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  K-------SHSHQQTHNKSLLSAFTKTKNCLRNCLRKLI----------LPTARPEKGLF 120
           K       S++H+    K L+S   K    + N L K +          L   +     +
Sbjct: 61  KRETQALSSYNHRPVSAK-LISVVIKATKSVGNRLNKWLSLGGTAVVEPLKEKQSPPPAY 120

Query: 121 REDAAVISPEPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLD---GRTHEKFVMSSKS 180
           R   A ++     V  E+  V+V+ +   P  + K +  SGPLD   G   +  ++S++S
Sbjct: 121 RT-GAFLTGNNNKVNAEKAVVQVERL---PVIKRKRIVKSGPLDRNHGIQEKMTLVSNRS 180

Query: 181 LKLSGPLDRKERPPLMFP-RSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRS 240
           + LSGPLDR  +  L+   RSP  SG LDG +++                  RL      
Sbjct: 181 MNLSGPLDRSVQERLILAYRSPIVSGQLDGNLNE------------------RL------ 240

Query: 241 PRVSGPLDGRDGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
            R+SGPL GR  SP++    N+     DDD  + W ++F+++KPT
Sbjct: 241 -RLSGPLKGRPPSPSVYVEYNKR----DDD--TRWDAMFHNLKPT 249

[Close]
BLAST of Lsi06G010680 vs. TAIR10
Match: AT1G80520.1 (AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 89.4 bits (220), Expect = 3.7e-18
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 1 

Query: 1  MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N L  +DI  FNH FLQ++GISIAKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 K 62
          +
Sbjct: 61 R 61

[Close]
BLAST of Lsi06G010680 vs. TAIR10
Match: AT1G15760.1 (AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.8e-17
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 1 

Query: 3  WFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLAKS 62
          WFSWLSRT L+P   +EYGL F++N L  +DI  F+H FLQ++GISIAKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 HSHQQTHNKS-----LLSAFTKTKNCLRNCLRKLI 93
                   S     +++A  KT+ CL + +R  I
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWI 99

[Close]
BLAST of Lsi06G010680 vs. NCBI nr
Match: gi|659086414|ref|XP_008443922.1| (PREDICTED: uncharacterized protein LOC103487398 [Cucumis melo])

HSP 1 Score: 428.3 bits (1100), Expect = 9.6e-117
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSHS-HQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH+ HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPL---- 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERPP     
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 -----MFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
                MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]
BLAST of Lsi06G010680 vs. NCBI nr
Match: gi|449458009|ref|XP_004146740.1| (PREDICTED: uncharacterized protein LOC101205285 [Cucumis sativus])

HSP 1 Score: 422.9 bits (1086), Expect = 4.0e-115
Identity = 218/274 (79.56%), Postives = 233/274 (85.04%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPL+TYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           KSH+HQ   N  L+SAF KTK CLRNCLR+LI P+   EK        +ISPEPP    +
Sbjct: 61  KSHTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPALEK-------PIISPEPPPSSLD 120

Query: 121 EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPL----- 180
           E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKER P      
Sbjct: 121 EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERAPSSPSPS 180

Query: 181 ----MFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRD 240
               MF RSPRTSGPLDGR+SDW+LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGRD
Sbjct: 181 PLPPMFTRSPRTSGPLDGRISDWSLSNKSPKMNGPPQGRMMRLIPPSRSPRVSGPLDGRD 240

Query: 241 GSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           GSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 GSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 266

[Close]
BLAST of Lsi06G010680 vs. NCBI nr
Match: gi|703120232|ref|XP_010102056.1| (hypothetical protein L484_016186 [Morus notabilis])

HSP 1 Score: 190.3 bits (482), Expect = 4.4e-45
Identity = 120/279 (43.01%), Postives = 168/279 (60.22%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+TGLDP   Y+YGL FARN L  +DI  FNH FLQ++GI++AKHRLEILK+A
Sbjct: 1   MDWFSWLSKTGLDPPLIYDYGLAFARNELQYEDIAYFNHEFLQSMGITVAKHRLEILKVA 60

Query: 61  KSHSHQQTHNKS-LLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPE---PPT 120
           K  +     + S L  A +KTK      + K +       K L        S E      
Sbjct: 61  KKENGGNPRSLSRLFLALSKTKKSFGKYISKFVFQDDMSSKDLPDHHYRERSQEHWRGAL 120

Query: 121 VEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLM 180
           + ++    ++++    P  +++ ++LSGPLD R HE+ + ++KSLKLSGPLD K    LM
Sbjct: 121 LRKQRSGDEMRD--NGPGLKNRALALSGPLDSRVHERLISNTKSLKLSGPLDGKLHERLM 180

Query: 181 FP-RSPRT--SGPLDGR-----MSDWALSKSPKLNGPPQGRM--MRLIPPSRSPRVSGPL 240
           +P RSP+   SGPL+GR           ++SP+L+GP  GR+     +  ++SP++SGPL
Sbjct: 181 YPNRSPKLTGSGPLNGRGPLPERLMITTTRSPRLSGPLDGRVHDRIFVTTTKSPKMSGPL 240

Query: 241 DGRDGSPNICCRCNRERIETDD-DYHSLWVSLFYDMKPT 265
           DGR  SP  C    +E+ + D+ D HSLW +LF+DMKPT
Sbjct: 241 DGRVLSPKFCTPYEKEKADVDEFDDHSLWTTLFHDMKPT 277

[Close]
BLAST of Lsi06G010680 vs. NCBI nr
Match: gi|645275645|ref|XP_008242921.1| (PREDICTED: uncharacterized protein LOC103341216 [Prunus mume])

HSP 1 Score: 187.6 bits (475), Expect = 2.8e-44
Identity = 132/288 (45.83%), Postives = 172/288 (59.72%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+TGLDP   YEYGL F+RN L  +D+  F+H FLQ++GIS+AKHRLEILKLA
Sbjct: 2   MDWFSWLSKTGLDPSLIYEYGLAFSRNELQFEDVSYFDHEFLQSMGISVAKHRLEILKLA 61

Query: 61  -KSHSHQQTHNKSL--LS-AFTKTKNCLRNCLRK------LILPTARPEKGLFRED--AA 120
            K  S    H +SL  LS A  +TK C      K      L L  A      +++    A
Sbjct: 62  KKERSGLGGHPRSLSRLSWALIRTKKCFSKYFNKWVFHEDLSLKDAGEGAARYQDHWRGA 121

Query: 121 VISPEPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSK---SLKLSG 180
           ++     TV  E +E       KP   +++ ++LSGPLDGR  E+ +  +    +LKLSG
Sbjct: 122 LLRRHKATVNGEVKEE------KPVMFKTRSIALSGPLDGRVQERLMAKNNNNGTLKLSG 181

Query: 181 PLDRKERPPLMFP-RSPRTSGPLD--GRMSDWAL---SKSPKLNGPPQGRM-MRLIPPSR 240
           PLD K    LM+  RSPR +GPLD  GR  +  L   ++SPKL+GP +GR   R +  ++
Sbjct: 182 PLDGKVHERLMYTNRSPRLTGPLDVNGRAPERLLVETTRSPKLSGPLEGRTHERFMVSNK 241

Query: 241 SPRVSGPLDGR-DGSPNICCRCNRERIE-TDDDYHSLWVSLFYDMKPT 265
           SPR+SGPLDGR   SPN C    +ER++  D D H LW +LF DMKPT
Sbjct: 242 SPRLSGPLDGRLVVSPNFCTPYEKERVDGIDYDDHPLWTALFQDMKPT 283

[Close]
BLAST of Lsi06G010680 vs. NCBI nr
Match: gi|1009125376|ref|XP_015879581.1| (PREDICTED: uncharacterized protein LOC107415710 [Ziziphus jujuba])

HSP 1 Score: 186.0 bits (471), Expect = 8.3e-44
Identity = 121/274 (44.16%), Postives = 166/274 (60.58%), Query Frame = 1 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+T LD  H YEYGL+FARN L  DDI  FNH FLQ++GIS+AKHRLEILKLA
Sbjct: 10  MDWFSWLSKTTLDTSHIYEYGLVFARNELQFDDITYFNHEFLQSMGISVAKHRLEILKLA 69

Query: 61  KSHSHQQTHNKS-LLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           +  +   T + S L+ A +KT+  L     KL           F + A         +  
Sbjct: 70  RKENGGTTKSLSRLIWAISKTRKSLVKYFSKLAFHDQEMSLKDFPDSAQSREYWKGVLLR 129

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVM--SSKSLKLSGPLDRKERPPLMF 180
            ++  ++KE    P   ++ ++LSGP+DGR HE+ +   ++++LKLSGPLD K    L++
Sbjct: 130 RQRSEELKE--DRPVLTTRSMALSGPIDGRVHERLMAPNNTRNLKLSGPLDGKMHDRLLY 189

Query: 181 P-RSPRTSGPLDGR-MSDWAL----SKSPKLNGPPQGRMM-RLIPPSRSPRVSGPLDGRD 240
             RSPR +G LDGR +    L    ++SPKL+GP   R   R +  +R+P++SGPLDGR 
Sbjct: 190 TNRSPRFTGTLDGRAIVPQRLMIPNNRSPKLSGPLDYRANDRALSINRNPKLSGPLDGRA 249

Query: 241 GSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
            SP  C    +++ + D D HSLW +LF DMKPT
Sbjct: 250 MSPKFCTPYEKDKGDDDFDDHSLWSALFQDMKPT 281

The following BLAST results are available for this feature:
BLAST of Lsi06G010680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi06G010680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTT1_CUCSA2.8e-11579.56Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264010 PE=4 SV=1[more]
W9RH70_9ROSA3.1e-4543.01Uncharacterized protein OS=Morus notabilis GN=L484_016186 PE=4 SV=1[more]
A0A059CKQ3_EUCGR1.2e-4141.99Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00478 PE=4 SV=1[more]
A0A067F767_CITSI2.7e-4142.29Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025779mg PE=4 SV=1[more]
D7T4Z0_VITVI2.7e-4143.33Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00550 PE=4 SV=... [more]
BLAST of Lsi06G010680 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G12462.15.5e-3034.74 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM... [more]
AT1G80520.13.7e-1868.85 Sterile alpha motif (SAM) domain-containing protein[more]
AT1G15760.11.8e-1749.47 Sterile alpha motif (SAM) domain-containing protein[more]
BLAST of Lsi06G010680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086414|ref|XP_008443922.1|9.6e-11780.36PREDICTED: uncharacterized protein LOC103487398 [Cucumis melo][more]
gi|449458009|ref|XP_004146740.1|4.0e-11579.56PREDICTED: uncharacterized protein LOC101205285 [Cucumis sativus][more]
gi|703120232|ref|XP_010102056.1|4.4e-4543.01hypothetical protein L484_016186 [Morus notabilis][more]
gi|645275645|ref|XP_008242921.1|2.8e-4445.83PREDICTED: uncharacterized protein LOC103341216 [Prunus mume][more]
gi|1009125376|ref|XP_015879581.1|8.3e-4444.16PREDICTED: uncharacterized protein LOC107415710 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G010680.1Lsi06G010680.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013761Sterile alpha motif/pointed domainGENE3DG3DSA:1.10.150.50coord: 6..70
score: 1.
IPR013761Sterile alpha motif/pointed domainunknownSSF47769SAM/Pointed domaincoord: 12..67
score: 7.9
NoneNo IPR availablePANTHERPTHR33915FAMILY NOT NAMEDcoord: 1..264
score: 3.1
NoneNo IPR availablePANTHERPTHR33915:SF3SUBFAMILY NOT NAMEDcoord: 1..264
score: 3.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi06G010680Csa1G264010Cucumber (Chinese Long) v2culsiB073
Lsi06G010680CSPI01G17110Wild cucumber (PI 183967)cpilsiB073
Lsi06G010680Cucsa.350560Cucumber (Gy14) v1cgylsiB564
Lsi06G010680CmaCh10G005060Cucurbita maxima (Rimu)cmalsiB065
Lsi06G010680CmaCh11G005060Cucurbita maxima (Rimu)cmalsiB132
Lsi06G010680CmoCh10G005410Cucurbita moschata (Rifu)cmolsiB052
Lsi06G010680Cla018682Watermelon (97103) v1lsiwmB420
Lsi06G010680MELO3C010276Melon (DHL92) v3.5.1lsimeB399
Lsi06G010680ClCG06G011890Watermelon (Charleston Gray)lsiwcgB378
Lsi06G010680MELO3C010276.2Melon (DHL92) v3.6.1lsimedB421
Lsi06G010680Cla97C06G121070Watermelon (97103) v2lsiwmbB379
Lsi06G010680Bhi02G000731Wax gourdlsiwgoB506
Lsi06G010680Cp4.1LG04g09190Cucurbita pepo (Zucchini)cpelsiB565
Lsi06G010680Cp4.1LG18g05220Cucurbita pepo (Zucchini)cpelsiB308
Lsi06G010680CsGy1G017330Cucumber (Gy14) v2cgyblsiB070
Lsi06G010680Carg09956Silver-seed gourdcarlsiB118
Lsi06G010680Carg27191Silver-seed gourdcarlsiB521
Lsi06G010680CsaV3_1G028350Cucumber (Chinese Long) v3cuclsiB084
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G010680Melon (DHL92) v3.6.1lsimedB426
Lsi06G010680Cucumber (Chinese Long) v3cuclsiB074
Lsi06G010680Cucurbita moschata (Rifu)cmolsiB120
Lsi06G010680Wild cucumber (PI 183967)cpilsiB064
Lsi06G010680Cucumber (Chinese Long) v2culsiB066
Lsi06G010680Melon (DHL92) v3.5.1lsimeB404
Lsi06G010680Cucumber (Gy14) v2cgyblsiB060