Csa1G264010 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAGTATATATAAATCACAATCCTCAAACTGTAAAAGCCATTGTTAAAGCTTTCATCAAACAAACATCCTCTGTCTCCTCCAATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGATCCACTTTACACTTATGAATACGGTCTCCTCTTTGCCCGTAATGCCCTCAAACCCGAAGACATTCCTCGTTTCAACCACCATTTTCTTCAGAAAATCGGCATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACACCCACCAACCCAATCTCAACAATCCCCTCATCTCCGCTTTCTTCAAGACCAAAATCTGTCTCAGAAACTGTCTCCGCCGCCTAATTTCCCCCTCCCCCGCCCTGGAGAAGCCCATCATTTCCCCTGAGCCACCCCCCTCGTCCCTCGACGAGCCTAAGGTTAAGGTCAAGGAGGTCCTCAAACCCCCGAGACGACGGAGTAAACACGTGTCGCTGTCCGGACCGTTGGATAGAACGCACGAGAAGTTCGTGATGAGTAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGAAAAGAGAGAGCGCCGTCGTCGCCGTCACCGTCGCCGCTGCCGCCTATGTTTACTAGAAGCCCAAGAACGTCTGGGCCTTTAGATGGGAGAATATCGGATTGGAGTTTAAGTAACAAAAGCCCAAAAATGAATGGGCCGCCACAAGGGAGAATGATGAGGCTGATTCCTCCAAGTCGAAGCCCAAGAGTATCTGGGCCGTTGGATGGAAGAGATGGAAGCCCAAGAATTTGTTGTCGGTGTAATAGGGAAAGAATGGAAAGTGAGGATGATTACCATTCCTTGTGGGTTTCGTTGTTTTATGACATGAAGCCAACTTGAATTCATGAATGTTCTTCTCTTTTTTCTTTTCTTCTTTTTATATGTGATGTGTGCATTTGATTTGAATGCCAATGCAATGCAACTAAATGAAAGTTGTCTATTGAATTTTTTGTACAACACAAGCTTGTTTTTTTAATTGATTTGGAATTAATATATACAATTTTCTGAT ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGATCCACTTTACACTTATGAATACGGTCTCCTCTTTGCCCGTAATGCCCTCAAACCCGAAGACATTCCTCGTTTCAACCACCATTTTCTTCAGAAAATCGGCATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACACCCACCAACCCAATCTCAACAATCCCCTCATCTCCGCTTTCTTCAAGACCAAAATCTGTCTCAGAAACTGTCTCCGCCGCCTAATTTCCCCCTCCCCCGCCCTGGAGAAGCCCATCATTTCCCCTGAGCCACCCCCCTCGTCCCTCGACGAGCCTAAGGTTAAGGTCAAGGAGGTCCTCAAACCCCCGAGACGACGGAGTAAACACGTGTCGCTGTCCGGACCGTTGGATAGAACGCACGAGAAGTTCGTGATGAGTAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGAAAAGAGAGAGCGCCGTCGTCGCCGTCACCGTCGCCGCTGCCGCCTATGTTTACTAGAAGCCCAAGAACGTCTGGGCCTTTAGATGGGAGAATATCGGATTGGAGTTTAAGTAACAAAAGCCCAAAAATGAATGGGCCGCCACAAGGGAGAATGATGAGGCTGATTCCTCCAAGTCGAAGCCCAAGAGTATCTGGGCCGTTGGATGGAAGAGATGGAAGCCCAAGAATTTGTTGTCGGTGTAATAGGGAAAGAATGGAAAGTGAGGATGATTACCATTCCTTGTGGGTTTCGTTGTTTTATGACATGAAGCCAACTTGA ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGATCCACTTTACACTTATGAATACGGTCTCCTCTTTGCCCGTAATGCCCTCAAACCCGAAGACATTCCTCGTTTCAACCACCATTTTCTTCAGAAAATCGGCATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACACCCACCAACCCAATCTCAACAATCCCCTCATCTCCGCTTTCTTCAAGACCAAAATCTGTCTCAGAAACTGTCTCCGCCGCCTAATTTCCCCCTCCCCCGCCCTGGAGAAGCCCATCATTTCCCCTGAGCCACCCCCCTCGTCCCTCGACGAGCCTAAGGTTAAGGTCAAGGAGGTCCTCAAACCCCCGAGACGACGGAGTAAACACGTGTCGCTGTCCGGACCGTTGGATAGAACGCACGAGAAGTTCGTGATGAGTAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGAAAAGAGAGAGCGCCGTCGTCGCCGTCACCGTCGCCGCTGCCGCCTATGTTTACTAGAAGCCCAAGAACGTCTGGGCCTTTAGATGGGAGAATATCGGATTGGAGTTTAAGTAACAAAAGCCCAAAAATGAATGGGCCGCCACAAGGGAGAATGATGAGGCTGATTCCTCCAAGTCGAAGCCCAAGAGTATCTGGGCCGTTGGATGGAAGAGATGGAAGCCCAAGAATTTGTTGTCGGTGTAATAGGGAAAGAATGGAAAGTGAGGATGATTACCATTCCTTGTGGGTTTCGTTGTTTTATGACATGAAGCCAACTTGA MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLAKSHTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPALEKPIISPEPPPSSLDEPKVKVKEVLKPPRRRSKHVSLSGPLDRTHEKFVMSSKSLKLSGPLDRKERAPSSPSPSPLPPMFTRSPRTSGPLDGRISDWSLSNKSPKMNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT*
BLAST of Csa1G264010 vs. TrEMBL
Match: A0A0A0LTT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G264010 PE=4 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 6.2e-155 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1
BLAST of Csa1G264010 vs. TrEMBL
Match: W9RH70_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_016186 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 4.9e-43 Identity = 118/295 (40.00%), Postives = 157/295 (53.22%), Query Frame = 1
BLAST of Csa1G264010 vs. TrEMBL
Match: D7T4Z0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0118g00550 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 9.3e-42 Identity = 107/269 (39.78%), Postives = 151/269 (56.13%), Query Frame = 1
BLAST of Csa1G264010 vs. TrEMBL
Match: A0A067F767_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025779mg PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 7.9e-41 Identity = 118/287 (41.11%), Postives = 154/287 (53.66%), Query Frame = 1
BLAST of Csa1G264010 vs. TrEMBL
Match: A0A059CKQ3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C00478 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.0e-40 Identity = 119/284 (41.90%), Postives = 161/284 (56.69%), Query Frame = 1
BLAST of Csa1G264010 vs. TAIR10
Match: AT2G12462.1 (AT2G12462.1 BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1)) HSP 1 Score: 141.7 bits (356), Expect = 6.4e-34 Identity = 104/290 (35.86%), Postives = 152/290 (52.41%), Query Frame = 1
BLAST of Csa1G264010 vs. TAIR10
Match: AT1G15760.1 (AT1G15760.1 Sterile alpha motif (SAM) domain-containing protein) HSP 1 Score: 91.7 bits (226), Expect = 7.6e-19 Identity = 51/95 (53.68%), Postives = 62/95 (65.26%), Query Frame = 1
BLAST of Csa1G264010 vs. TAIR10
Match: AT1G80520.1 (AT1G80520.1 Sterile alpha motif (SAM) domain-containing protein) HSP 1 Score: 90.5 bits (223), Expect = 1.7e-18 Identity = 43/61 (70.49%), Postives = 46/61 (75.41%), Query Frame = 1
BLAST of Csa1G264010 vs. NCBI nr
Match: gi|449458009|ref|XP_004146740.1| (PREDICTED: uncharacterized protein LOC101205285 [Cucumis sativus]) HSP 1 Score: 554.7 bits (1428), Expect = 8.9e-155 Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 1
BLAST of Csa1G264010 vs. NCBI nr
Match: gi|659086414|ref|XP_008443922.1| (PREDICTED: uncharacterized protein LOC103487398 [Cucumis melo]) HSP 1 Score: 535.0 bits (1377), Expect = 7.3e-149 Identity = 258/267 (96.63%), Postives = 261/267 (97.75%), Query Frame = 1
BLAST of Csa1G264010 vs. NCBI nr
Match: gi|703120232|ref|XP_010102056.1| (hypothetical protein L484_016186 [Morus notabilis]) HSP 1 Score: 183.0 bits (463), Expect = 7.1e-43 Identity = 118/295 (40.00%), Postives = 157/295 (53.22%), Query Frame = 1
BLAST of Csa1G264010 vs. NCBI nr
Match: gi|296084551|emb|CBI25572.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 178.7 bits (452), Expect = 1.3e-41 Identity = 107/269 (39.78%), Postives = 151/269 (56.13%), Query Frame = 1
BLAST of Csa1G264010 vs. NCBI nr
Match: gi|470101572|ref|XP_004287244.1| (PREDICTED: uncharacterized protein LOC101299028 [Fragaria vesca subsp. vesca]) HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41 Identity = 119/287 (41.46%), Postives = 160/287 (55.75%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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