Carg09956 (gene) Silver-seed gourd

Overview
NameCarg09956
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionSAM domain (Sterile alpha motif) protein, putative
LocationCucurbita_argyrosperma_scaffold_030 : 700267 .. 701058 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACTTACGAATACGGCCTCGTTTTCGCCCGAAATGGCCTCAGACCCGAAGACATTCCTCGTTTCAACCACGATTTTCTCCAGAAAATCGGAGTTTCCATCGCCAAACACAGGCTCGAGATTCTGAAACTCGCCAAATGCAACAGAGAAGAAGCCACCCAAAAGAAACTGCTCCTTTCCGCTTTCGTCAAGACAAAGAACTGCCTCCGGAACTGCCTCAGGAAGCTTATTTTCACCAACGCCAAGTCGGAGAAGGGGATTTTCCGGGAGGACGCGGCGGTGGTTTCCCCAGAGCCGATTACCTACAGCGAGGATCTCAGCCGGAAACTGGAGGTTAAGGAGGTGCTCAAGCCGCCGAAACGACGCAGTAAACACGTGTCGCTGTCCGGGCCGTTGGACGGGAGAACGCACGAGAAGTTAATGACGAACAGTAAAAGCCTAAAGCTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCATGTTTCCAAGAAGCCCGAGATCATCTGGGCCTCTGGATGGGAGAGTATCTGATTGGGCCTCGAGTAGAAGCCCAAAGCTGAATGGACCGCCGCAGGGGAGAATGATGAGGCTGATACCGCCGAGCAGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAGTTTGCTGTCGTTGTAATAGAGAGAGGATGGAAACCGACGATGATTATCACTCATTGTGGGTTTCATTGTTCTATGACATGAAGCCCACTTGA

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACTTACGAATACGGCCTCGTTTTCGCCCGAAATGGCCTCAGACCCGAAGACATTCCTCGTTTCAACCACGATTTTCTCCAGAAAATCGGAGTTTCCATCGCCAAACACAGGCTCGAGATTCTGAAACTCGCCAAATGCAACAGAGAAGAAGCCACCCAAAAGAAACTGCTCCTTTCCGCTTTCGTCAAGACAAAGAACTGCCTCCGGAACTGCCTCAGGAAGCTTATTTTCACCAACGCCAAGTCGGAGAAGGGGATTTTCCGGGAGGACGCGGCGGTGGTTTCCCCAGAGCCGATTACCTACAGCGAGGATCTCAGCCGGAAACTGGAGGTTAAGGAGGTGCTCAAGCCGCCGAAACGACGCAGTAAACACGTGTCGCTGTCCGGGCCGTTGGACGGGAGAACGCACGAGAAGTTAATGACGAACAGTAAAAGCCTAAAGCTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCATGTTTCCAAGAAGCCCGAGATCATCTGGGCCTCTGGATGGGAGAGTATCTGATTGGGCCTCGAGTAGAAGCCCAAAGCTGAATGGACCGCCGCAGGGGAGAATGATGAGGCTGATACCGCCGAGCAGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAGTTTGCTGTCGTTGTAATAGAGAGAGGATGGAAACCGACGATGATTATCACTCATTGTGGGTTTCATTGTTCTATGACATGAAGCCCACTTGA

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACTTACGAATACGGCCTCGTTTTCGCCCGAAATGGCCTCAGACCCGAAGACATTCCTCGTTTCAACCACGATTTTCTCCAGAAAATCGGAGTTTCCATCGCCAAACACAGGCTCGAGATTCTGAAACTCGCCAAATGCAACAGAGAAGAAGCCACCCAAAAGAAACTGCTCCTTTCCGCTTTCGTCAAGACAAAGAACTGCCTCCGGAACTGCCTCAGGAAGCTTATTTTCACCAACGCCAAGTCGGAGAAGGGGATTTTCCGGGAGGACGCGGCGGTGGTTTCCCCAGAGCCGATTACCTACAGCGAGGATCTCAGCCGGAAACTGGAGGTTAAGGAGGTGCTCAAGCCGCCGAAACGACGCAGTAAACACGTGTCGCTGTCCGGGCCGTTGGACGGGAGAACGCACGAGAAGTTAATGACGAACAGTAAAAGCCTAAAGCTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCATGTTTCCAAGAAGCCCGAGATCATCTGGGCCTCTGGATGGGAGAGTATCTGATTGGGCCTCGAGTAGAAGCCCAAAGCTGAATGGACCGCCGCAGGGGAGAATGATGAGGCTGATACCGCCGAGCAGGAGCCCAAGAGTATCTGGGCCGCTGGATGGACGAGATGGAAGCCCAAGAGTTTGCTGTCGTTGTAATAGAGAGAGGATGGAAACCGACGATGATTATCACTCATTGTGGGTTTCATTGTTCTATGACATGAAGCCCACTTGA

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLAKCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSEDLSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERPMFPRSPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT
Homology
[Close]
BLAST of Carg09956 vs. NCBI nr
Match: XP_022960905.1 (uncharacterized protein LOC111461567 [Cucurbita moschata])

HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106
Identity = 259/263 (98.48%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEAT+KKLLLSAF KTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP 199

Query: 181 RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPRVCCRCNR 240
           RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPR+CCRCNR
Sbjct: 200 RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPRICCRCNR 259

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 ERMETDDDYHSLWVSLFYDMKPT 282

[Close]
BLAST of Carg09956 vs. NCBI nr
Match: XP_023516525.1 (uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.4 bits (1012), Expect = 3.0e-106
Identity = 258/263 (98.10%), Postives = 262/263 (99.62%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEATQKKLLLSAF KTKNCLRNCLRKLIFTNAKSEKGIFREDAAV+SPEPITYSED
Sbjct: 80  KCDREEATQKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 139

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP 180
           LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP 199

Query: 181 RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPRVCCRCNR 240
           RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSP++CCRCNR
Sbjct: 200 RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPKICCRCNR 259

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 260 ERMETDDDYHSLWVSLFYDMKPT 282

[Close]
BLAST of Carg09956 vs. NCBI nr
Match: XP_022987839.1 (uncharacterized protein LOC111485262 [Cucurbita maxima])

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 251/263 (95.44%), Postives = 256/263 (97.34%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLVFARNGL+PEDIPRFNHDFLQ+IGVSIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           KC+REEATQKKLLLSA  KTKNCLRNCLRKLIFTNAKSEKGIFREDAAV+SPEPITYSED
Sbjct: 61  KCDREEATQKKLLLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMFPRSP 180
           LSRK EVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPM PRSP
Sbjct: 121 LSRKQEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKERPMVPRSP 180

Query: 181 RSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPRVCCRCNR 240
             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GSPR+CCRCNR
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGSPRICCRCNR 240

Query: 241 ERMETDDDYHSLWVSLFYDMKPT 264
           ERMETDDDYHSLWVSLFYDMKPT
Sbjct: 241 ERMETDDDYHSLWVSLFYDMKPT 263

[Close]
BLAST of Carg09956 vs. NCBI nr
Match: XP_022134673.1 (uncharacterized protein LOC111006885 [Momordica charantia])

HSP 1 Score: 294.3 bits (752), Expect = 4.2e-76
Identity = 203/272 (74.63%), Postives = 221/272 (81.25%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARNG+RPEDIPRFNHDFL KIGVS+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNGIRPEDIPRFNHDFLHKIGVSVAKHRLEILKLA 60

Query: 61  KCNREEATQKKL-----LLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPI 120
           K   EE   KK      L+SAF KTK CLRNC+RKL+ +N K E+ +FRE  A +SPE +
Sbjct: 61  KLENEEPAAKKFPAAAPLVSAFAKTKKCLRNCIRKLVPSNGKPERAVFREGTAGISPETM 120

Query: 121 TYSEDLSRKLEVKEV--LKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKER 180
           +YSE+L RK EV+EV   KP  RR K+VSLSGPLDGR HEK MTN    XXXXXXXXKER
Sbjct: 121 SYSENLGRKQEVEEVWKRKPASRRRKNVSLSGPLDGRGHEKAMTNCKSLXXXXXXXXKER 180

Query: 181 PMFPRS--PRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGS 240
           PMF RS     XXXXXXXXXXXXXXXXXXXXXXXXX        XXXXXXXXXXXXXXGS
Sbjct: 181 PMFSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKMMRLIPSXXXXXXXXXXXXXXGS 240

Query: 241 PRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           PR+CCRCNRER+ETDDDYHSLWVSLFYD+KPT
Sbjct: 241 PRICCRCNRERIETDDDYHSLWVSLFYDLKPT 272

[Close]
BLAST of Carg09956 vs. NCBI nr
Match: XP_004146740.1 (PREDICTED: uncharacterized protein LOC101205285 [Cucumis sativus] >KGN65198.1 hypothetical protein Csa_1G264010 [Cucumis sativus])

HSP 1 Score: 258.5 bits (659), Expect = 2.5e-65
Identity = 192/275 (69.82%), Postives = 211/275 (76.73%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPL+TYEYGL+FARN L+PEDIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           K +  +      L+SAF KTK CLRNCLR+LI  +   EK        ++SPEP   S D
Sbjct: 61  KSHTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPALEK-------PIISPEPPPSSLD 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKER------- 180
              K++VKEVLKPP+RRSKHVSLSGPLD RTHEK + +XXXXXXXXXXXX ER       
Sbjct: 121 -EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSXXXXXXXXXXXXXERAPSSPSP 180

Query: 181 ----PMFPRSPR-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
               PMF RSPR S             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SPLPPMFTRSPRTSGPLDGRISDWSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
            GSPR+CCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 266

[Close]
BLAST of Carg09956 vs. TAIR10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1))

HSP 1 Score: 94.0 bits (232), Expect = 1.5e-19
Identity = 60/166 (36.14%), Postives = 89/166 (53.61%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  L+ EDI  FNH+FL+++GV++ KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  KCNREEATQ------KKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEP 120
           K   +  +          L+S  +K    + N L K +     +     +E     SP P
Sbjct: 61  KRETQALSSYNHRPVSAKLISVVIKATKSVGNRLNKWLSLGGTAVVEPLKEKQ---SPPP 120

Query: 121 --------ITYSEDLSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTH 153
                      +  ++ +  V +V + P  + K +  SGPLD R H
Sbjct: 121 AYRTGAFLTGNNNKVNAEKAVVQVERLPVIKRKRIVKSGPLD-RNH 162

[Close]
BLAST of Carg09956 vs. TAIR10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19
Identity = 51/96 (53.12%), Postives = 64/96 (66.67%), Query Frame = 0 

Query: 1  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N L  EDI  FNH+FLQ +G+SIAKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 KCNREEA--TQKKL--LLSAFVKTKNCLRNCLRKLI 93
          + +R+ +  T + +  +L A  KT  C    +R  I
Sbjct: 61 RRDRKPSPLTARSIFRVLIAIKKTGKCFSEHVRAWI 96

[Close]
BLAST of Carg09956 vs. TAIR10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein)

HSP 1 Score: 92.4 bits (228), Expect = 4.4e-19
Identity = 48/95 (50.53%), Postives = 68/95 (71.58%), Query Frame = 0 

Query: 3  WFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLAKC 62
          WFSWLSRT L+P   +EYGL F++N L  EDI  F+H+FLQ +G+SIAKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 NREEA---TQKKL--LLSAFVKTKNCLRNCLRKLI 93
          +R+ +   T + +  +++A  KT+ CL + +R  I
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWI 99

[Close]
BLAST of Carg09956 vs. TrEMBL
Match: tr|A0A1S3B951|A0A1S3B951_CUCME (uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 192/276 (69.57%), Postives = 211/276 (76.45%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L+PEDIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KCN-REEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSE 120
           K +   +      L+SAF KTK CLRNCLR+LI  +   +K        ++SPEP   S 
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 DLSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKER------ 180
           D   K++VKEVLKPP+RRSKHVSLSGPLD RTHEK + +XXXXXXXXXXXX ER      
Sbjct: 121 D-EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSXXXXXXXXXXXXXERPPXXXX 180

Query: 181 -----PMFPRSPR-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
                PMFPRSPR S              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXPMFPRSPRTSGPLDGRISDWGLSNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
           X GSPR+CCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 XDGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

[Close]
BLAST of Carg09956 vs. TrEMBL
Match: tr|A0A0A0LTT1|A0A0A0LTT1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264010 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 1.7e-65
Identity = 192/275 (69.82%), Postives = 211/275 (76.73%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSRTGLDPL+TYEYGL+FARN L+PEDIPRFNH FLQKIG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLYTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           K +  +      L+SAF KTK CLRNCLR+LI  +   EK        ++SPEP   S D
Sbjct: 61  KSHTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPALEK-------PIISPEPPPSSLD 120

Query: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNXXXXXXXXXXXXKER------- 180
              K++VKEVLKPP+RRSKHVSLSGPLD RTHEK + +XXXXXXXXXXXX ER       
Sbjct: 121 -EPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSXXXXXXXXXXXXXERAPSSPSP 180

Query: 181 ----PMFPRSPR-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
               PMF RSPR S             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 SPLPPMFTRSPRTSGPLDGRISDWSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XGSPRVCCRCNRERMETDDDYHSLWVSLFYDMKPT 264
            GSPR+CCRCNRERME++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 266

[Close]
BLAST of Carg09956 vs. TrEMBL
Match: tr|A0A2C9UM11|A0A2C9UM11_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G121200 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 6.2e-28
Identity = 79/168 (47.02%), Postives = 104/168 (61.90%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLSR+GL+P  TYEYGL FARN L+ ED+  FNH+FLQ +G+S+AKHRLEILKLA
Sbjct: 1   MDWFSWLSRSGLEPSLTYEYGLAFARNELQEEDLSHFNHEFLQSMGISVAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFV----KTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPIT 120
           K   +E       +S F+    KTK  L+ C+ KL+F     E+ +F+       PEP++
Sbjct: 61  K---KEVGANTTGISKFILAINKTKKSLKKCISKLVF----HEESVFK-----ALPEPLS 120

Query: 121 YSED------LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTN 159
              D       +RK +V+   KPP  R++  + SGPLDG   E LM N
Sbjct: 121 RYRDEQSTGVFTRKFQVE---KPPVLRTRIQAKSGPLDGSMPENLMLN 153

[Close]
BLAST of Carg09956 vs. TrEMBL
Match: tr|A0A2I4EMR2|A0A2I4EMR2_9ROSI (uncharacterized protein LOC108990996 OS=Juglans regia OX=51240 GN=LOC108990996 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.5e-26
Identity = 76/163 (46.63%), Postives = 97/163 (59.51%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWFSWLS++GL+P   YEYG+ FARN L+ ED+  FNH+FLQ +G+S+AKHRLEILKLA
Sbjct: 1   MDWFSWLSKSGLEPSLIYEYGVAFARNELQLEDVNYFNHEFLQSMGISVAKHRLEILKLA 60

Query: 61  -KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSE 120
            K NR        L+ A  KTK CL  C+ KL+F +  S K           PE + Y E
Sbjct: 61  RKENRVGPGALSGLILAINKTKKCLNKCINKLVFRDDVSFK---------AGPEMMQYPE 120

Query: 121 DLSRKL-------EVKEVLKPPKRRSKHVSLSGPLDGRTHEKL 156
                L       +VKE    P  + + ++LSGPLDGR  EK+
Sbjct: 121 HWRGGLLRRHKNEDVKEDDYKPALKKRSITLSGPLDGRVQEKV 154

[Close]
BLAST of Carg09956 vs. TrEMBL
Match: tr|A0A067K279|A0A067K279_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16984 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 2.6e-26
Identity = 74/166 (44.58%), Postives = 97/166 (58.43%), Query Frame = 0 

Query: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60
           MDWF+WLSR+ LDP   YEYGL F+RN L+ ED+  FNH+FLQ +G+SIAKHRLEILKLA
Sbjct: 1   MDWFTWLSRSNLDPSLIYEYGLAFSRNELQEEDLTYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120
           K +R        L+ A  KTK  LR C+    F     E+ +F+       PEP  Y E 
Sbjct: 61  KKDRTSTNGLSKLILAITKTKKSLRKCICNFAF----HEQSVFK-----ALPEPARYREQ 120

Query: 121 ----LSRKL----EVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTN 159
               L+R      +++   +PP  + +  + SGPLDGR  + LM N
Sbjct: 121 WRGGLTRNYKSDKDIQVEKQPPVIKIRRQAKSGPLDGRVPKNLMLN 157

The following BLAST results are available for this feature:
BLAST of Carg09956 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960905.13.0e-10698.48uncharacterized protein LOC111461567 [Cucurbita moschata][more]
XP_023516525.13.0e-10698.10uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo][more]
XP_022987839.12.0e-10295.44uncharacterized protein LOC111485262 [Cucurbita maxima][more]
XP_022134673.14.2e-7674.63uncharacterized protein LOC111006885 [Momordica charantia][more]
XP_004146740.12.5e-6569.82PREDICTED: uncharacterized protein LOC101205285 [Cucumis sativus] >KGN65198.1 hy... [more]
BLAST of Carg09956 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G12462.11.5e-1936.14BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con... [more]
AT1G80520.12.6e-1953.13Sterile alpha motif (SAM) domain-containing protein[more]
AT1G15760.14.4e-1950.53Sterile alpha motif (SAM) domain-containing protein[more]
BLAST of Carg09956 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg09956 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B951|A0A1S3B951_CUCME1.7e-6569.57uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=... [more]
tr|A0A0A0LTT1|A0A0A0LTT1_CUCSA1.7e-6569.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264010 PE=4 SV=1[more]
tr|A0A2C9UM11|A0A2C9UM11_MANES6.2e-2847.02Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G121200 PE=4 SV=... [more]
tr|A0A2I4EMR2|A0A2I4EMR2_9ROSI1.5e-2646.63uncharacterized protein LOC108990996 OS=Juglans regia OX=51240 GN=LOC108990996 P... [more]
tr|A0A067K279|A0A067K279_JATCU2.6e-2644.58Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16984 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09956-RACarg09956-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:1.10.150.50coord: 1..69
e-value: 1.5E-8
score: 36.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..230
NoneNo IPR availablePANTHERPTHR33915:SF3SUBFAMILY NOT NAMEDcoord: 1..263
NoneNo IPR availablePANTHERPTHR33915FAMILY NOT NAMEDcoord: 1..263
NoneNo IPR availableCDDcd09487SAM_superfamilycoord: 2..62
e-value: 9.45026E-9
score: 49.5453
IPR001660Sterile alpha motif domainPFAMPF07647SAM_2coord: 6..62
e-value: 8.1E-5
score: 22.6
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILYSSF47769SAM/Pointed domaincoord: 12..65

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09956Cla018682Watermelon (97103) v1carwmB0126
Carg09956Csa1G264010Cucumber (Chinese Long) v2carcuB0133
Carg09956MELO3C010276Melon (DHL92) v3.5.1carmeB0131
Carg09956ClCG06G011890Watermelon (Charleston Gray)carwcgB0125
Carg09956CSPI01G17110Wild cucumber (PI 183967)carcpiB0138
Carg09956Cucsa.350560Cucumber (Gy14) v1carcgyB0161
Carg09956CmaCh10G005060Cucurbita maxima (Rimu)carcmaB0166
Carg09956CmaCh11G005060Cucurbita maxima (Rimu)carcmaB0169
Carg09956CmoCh10G005410Cucurbita moschata (Rifu)carcmoB0172
Carg09956Lsi06G010680Bottle gourd (USVL1VR-Ls)carlsiB118
Carg09956Cp4.1LG04g09190Cucurbita pepo (Zucchini)carcpeB0186
Carg09956CsGy1G017330Cucumber (Gy14) v2carcgybB0132
Carg09956MELO3C010276.2Melon (DHL92) v3.6.1carmedB0135
Carg09956CsaV3_1G028350Cucumber (Chinese Long) v3carcucB0142
Carg09956Cla97C06G121070Watermelon (97103) v2carwmbB0133
Carg09956Bhi02G000731Wax gourdcarwgoB0165
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg09956Carg27191Silver-seed gourdcarcarB153
The following block(s) are covering this gene:
GeneOrganismBlock
Carg09956Silver-seed gourdcarcarB154
Carg09956Cucurbita maxima (Rimu)carcmaB0165
Carg09956Cucurbita moschata (Rifu)carcmoB0175
Carg09956Cucurbita pepo (Zucchini)carcpeB0181
Carg09956Cucurbita pepo (Zucchini)carcpeB0185
Carg09956Bottle gourd (USVL1VR-Ls)carlsiB115
Carg09956Melon (DHL92) v3.5.1carmeB0133
Carg09956Watermelon (97103) v2carwmbB0132
Carg09956Watermelon (97103) v2carwmbB0136