Lsi05G021980 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G021980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	P53 and DNA damage-regulated protein 1
Location	chr05 : 28560302 .. 28563795 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGGGAAACAGTTTCCGCCTCTCTCACGCGCTTCTTCTTCTTCTTCTTCACGGCGTCTCCCCCTCTCTTTCTGCAGCTCAGTCTCGCCGCTGCATCTCTCCGGTTCAGTGCTGCCGGCCTTGTACTGATTTTCTACTCTCTTATTGTTACTGGTAATCTCCCATCTCTATCCATGCCGCCATTCTCACTTGAAAAACACAATATAGGACTTCTCTAACGAAATAATAGAGGAGTCCGAAATCGAATAGAACCGAGGGCAAAAAGAAGAAAAAAAAACCTTGTGGCTAATTGAGACTCGAACTGCCTTTTGATTTGTTGCACATCTCTGTCAAGTGAGGCTTTGATTATTTGTATATCTCTTTCGTATTTTCTGAAAATTGCCTTGTTTACTTCTCTACATCAGATGAAGTAATCTATGCATTGTGCAATTCTCTTTTAATGCCTAGTTTATTGGAGTTATTTTGATTGGCTGAACAACCTTAACCATATTTATATTTGTGGGTTTTAGTTGGAAGAAGACAGCTAGTATTCTTTTAAAAGTAAAAATCTTAACCACTACAATCACCAATAATACTTGAATTTATTGGAAGACTTAAAGGGACCTAAACATTCATCTCTTATAGCCATTTTTATAGATAATATGGATATAAATCATAGATAGAGTCATAGAGAAAAAAACGATTTTCCCAATACACGGTTGAAGAGAAAACCAAATTAATTTACAGTCAGTAACTGGTTAACTTTATTATGGAAAATTCCTGTTTCATCCCTTTCTAGTTTTCTCTTGAGTGCCTTCCATCTTGAATCGTTTGAGAGTTGGGGGATTCTGCAGAATAGTTGAGCCAAATGTTGTTCCTCCTTTGAAATTTATTCTTGGAGTTGGATGTAACTGTGGAATACTTAATTTAACCAACCCAAATGTTGTTCCTCCTTTGAAATTTAAGGAGAGCGTGGGTTGTTACCTAAAATTGGAAGCCCTGTTTTGCTTATGGCACAAGTTGCAGTTGTGAAGGCGATGATTCTTGTTTGTCTGTGTGAACTTTTATATATATTATTCTTATTTTTATTGATAAGAAACAATTTCATTGATGTATGAAATTTACAAAAGGAATGCATACTCCATAATGGTTACACAAGGCTTTCCCAATTGGAAAAAAGGAAGAAAGGGAAGCATAACTATAGGAAGCAAAGATGTTAGACAATTTACACCATGAAATAGCATAATAAATAACTAGATAAAAGAGCACTACAAAATTTTGCTCTTTGTCCACAAAAACTCTTTGATTACGCCCTTTCTAAATGACCAAAAAGAATACGTTGGTTGAAGTAGACCCATAGGAAAGAATCCTCTATCTGTATGAGCTTGATAATCTCTCTCTCTCTCAGTAACAACTTTCATTTTTTTTTTTTCATATTTGTTTGGGGAATCTGAAAGATTCTCTCTTCATATTACATGTTTGGACCATATTGACGATGTCTCAGAGTGAATCTTAGGTTGGAATAAAATGAATGAGACAATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTCCTAGCCCGCAATGAAGTAAGCTTAAAAATATTAGAAGTTTGGAGACTTGGCCCAATATTAATTGTTTTTCCTACTTGCAATATACATTCTTCGTGGAGTAAATTGAAATTGCAGTGTCACAATTTGTCTATCATTGAAATGAAATTGTTTTGTAACTTGAGAAGTAAAAAGGTAAAGTGACCGTTGTTGTTTGGCATCAAAATGTCAGTTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCGAGGACGACAAAGGCTAGTGTACCATCACCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGTGGAAATCATGACTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCCTGGAGACAGGTTACTGCTGGGGCACATTTTTTTTCCTCATTTTGTTAATTTTATGTCATTTATTAGTGCATGGCTCTTTAAGAAATAATCCATTAGAATTCGTTAAAACATATGCAGTTCCGTGTTTGTTCAATTAACCTGTTAATGGCTATAGTTAAATCCTCAGAGCTTCGGCTTGAATAATTTCATGGAAGCTGTTTGTCATTGTAATCTGTAGTGACCAAAAGGCTTCTCTTAAATTGGATGGCGACAGGGCAAGGTGGTGTATACTGTTTGTGGTTTTTGTGGAGATTTCCCTTGGGTTTGAAAACAAGATATACTGTTTGTGGTTTTTGTGGAGATTTCCCTTGGGTTTGAAAACAAGATGGATATCTTTTCCCTTCTATATAAATAATAAAAATGAATGGCTCTTTCATCCGGTCAATCCTTGGGTGAAACAAGTATTTTCATTTTTCAATTTGATGATGATTTTTCTTTTTTTGGATGAATGATCTAATAGTGTTATGAGAAGTATATATGCATCTCTCATTTTGAACTAATGAAGCTCCTTTCCCATTTTTAAGTGCCATATGGTTTAAGAAAGTTGAAGGCAAGGTTTTTTAGATTCATTTTATTAATATCCCTTTGGGGACATCCGGTAGATTTATTTTATTATTATTATTATTTTCTTAAATAATACAATAGTCAGTAACATTTTCTACTGGAAACATTTATTTCATTCACTTGGACTTTGTAGAGCTCACACTTTATTTTGACAGTTGAATTATTGTTTTTGGTCTGTATCCCTTTCACATGGCAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTACGTAAAAGATCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTAGCTGACAAGATCAGTCCAGGGGTGCTCAAGTCATTGGTGACATTGACAGACAAACCAAAATGATTAACCCCATCTATTCCAATATGAATGAAGGAGGTGGGAATTGAGTTCATCCAGGACCCTTGTTGCTGATGCTTGTAAAATTCAATTTTTGCTGTGACTTGGATGTAGTACTGCTTCTCACTCAAGTGATGAAAACGGACCCAAGTACATTCTTTTTCACTTGTTACTGTACTGACATTCATTTAGTTGTGTATGCTGGGTAGCGTTAGAATAGATTATATCTCCAAGTCATGTTTGTGTGTCAGTTTTGAATTTTACATCCAGCTCTGTATAGGTGCTAGCAGTAGTAGACTAGTAGCATGTAAGAATTTAGTCTGAACTGATGGGATTCTGGACTTGTCTGATTGTCTATTATTGATACATTTGCTCTCTAAATTATTCTGCCTACAGGATTGATGTGTAGTGTAATTTGTATTGCGATTTTGGCCTAGCCCAAAAACTTGGGCATTACAAGCTCCATGATTATATTAATTCCATGGTTTCATATGCTGGGGGCAAAAGAT

mRNA sequence

AAAAGGGAAACAGTTTCCGCCTCTCTCACGCGCTTCTTCTTCTTCTTCTTCACGGCGTCTCCCCCTCTCTTTCTGCAGCTCAGTCTCGCCGCTGCATCTCTCCGGTTCAGTGCTGCCGGCCTTGTACTGATTTTCTACTCTCTTATTGTTACTGAGTGAATCTTAGGTTGGAATAAAATGAATGAGACAATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTCCTAGCCCGCAATGAATTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCGAGGACGACAAAGGCTAGTGTACCATCACCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGTGGAAATCATGACTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCCTGGAGACAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTACGTAAAAGATCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTAGCTGACAAGATCAGTCCAGGGGTGCTCAAGTCATTGGTGACATTGACAGACAAACCAAAATGATTAACCCCATCTATTCCAATATGAATGAAGGAGGTGGGAATTGAGTTCATCCAGGACCCTTGTTGCTGATGCTTGTAAAATTCAATTTTTGCTGTGACTTGGATGTAGTACTGCTTCTCACTCAAGTGATGAAAACGGACCCAAGTACATTCTTTTTCACTTGTTACTGTACTGACATTCATTTAGTTGTGTATGCTGGGTAGCGTTAGAATAGATTATATCTCCAAGTCATGTTTGTGTGTCAGTTTTGAATTTTACATCCAGCTCTGTATAGGTGCTAGCAGTAGTAGACTAGTAGCATGTAAGAATTTAGTCTGAACTGATGGGATTCTGGACTTGTCTGATTGTCTATTATTGATACATTTGCTCTCTAAATTATTCTGCCTACAGGATTGATGTGTAGTGTAATTTGTATTGCGATTTTGGCCTAGCCCAAAAACTTGGGCATTACAAGCTCCATGATTATATTAATTCCATGGTTTCATATGCTGGGGGCAAAAGAT

Coding sequence (CDS)

ATGAATGAGACAATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTCCTAGCCCGCAATGAATTGGTTGAAAATGATAGAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCGAGGACGACAAAGGCTAGTGTACCATCACCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGTGGAAATCATGACTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCCTGGAGACAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTACAGAGTTACGTAAAAGATCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTAGCTGACAAGATCAGTCCAGGGGTGCTCAAGTCATTGGTGACATTGACAGACAAACCAAAATGA

Protein sequence

MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

Homology

[Close]

BLAST of Lsi05G021980 vs. TrEMBL
Match: A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.7e-82
Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           MNETMRQFQQSLIELEAEAERLLLAR+ELVENDRVRNGNREALTALRRRARTTK+SVPSP
Sbjct: 87  MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 146

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQ+
Sbjct: 147 FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQT 206

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 207 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 252

[Close]

BLAST of Lsi05G021980 vs. TrEMBL
Match: W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 1.8e-72
Identity = 138/166 (83.13%), Postives = 157/166 (94.58%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           M+ETM++FQQ L+ELE EAERLLLAR++LVEND+ RNGNREALTALR+RARTTK S+ SP
Sbjct: 1   MDETMKEFQQQLVELETEAERLLLARHQLVENDKGRNGNREALTALRKRARTTKTSILSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIM+E+GG ESRPLVKE+C+TCGNHDS+ERTWMMFPGTDVFAR+PFHAAHTILETDQ 
Sbjct: 61  FESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTDVFARIPFHAAHTILETDQE 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDFEAK LQ+YVKD+SLLISE+GALADKISPGVLKSLVTLTDK K
Sbjct: 121 RLDFEAKNLQTYVKDKSLLISERGALADKISPGVLKSLVTLTDKRK 166

[Close]

BLAST of Lsi05G021980 vs. TrEMBL
Match: V4U8R1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022588mg PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 2.9e-70
Identity = 136/166 (81.93%), Postives = 153/166 (92.17%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           M ETM+QFQQ+LIE+E EAE LL AR++LVE+D VRNGNREALTALR+RARTTK SV SP
Sbjct: 1   MEETMKQFQQNLIEIENEAEHLLFARHQLVESDIVRNGNREALTALRKRARTTKTSVTSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMK+ GG  +RPLVKE+CTTCGNHDSNE TWMMFPGTDVFA++PFHAAHTILETDQ+
Sbjct: 61  FESIMKDTGGPGTRPLVKEVCTTCGNHDSNEHTWMMFPGTDVFAKIPFHAAHTILETDQT 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDFEAKKLQSYVK++SL ISEKGALADKISPGVL+SLVTLTDK K
Sbjct: 121 RLDFEAKKLQSYVKEKSLFISEKGALADKISPGVLRSLVTLTDKSK 166

[Close]

BLAST of Lsi05G021980 vs. TrEMBL
Match: A0A067H1A3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031062mg PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.0e-70
Identity = 136/166 (81.93%), Postives = 153/166 (92.17%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           M ETM+QFQQ+LIE+E EAE LL AR++LVE+D VRNGNREALTALR+RARTTK SV SP
Sbjct: 1   MEETMKQFQQNLIEIENEAEHLLFARHQLVESDIVRNGNREALTALRKRARTTKTSVISP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMK+ GG  +RPLVKE+CTTCGNHDSNE TWMMFPGTDVFA++PFHAAHTILETDQ+
Sbjct: 61  FESIMKDTGGPGTRPLVKEVCTTCGNHDSNEHTWMMFPGTDVFAKIPFHAAHTILETDQT 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDFEAKKLQSYVK++SL ISEKGALADKISPGVL+SLVTLTDK K
Sbjct: 121 RLDFEAKKLQSYVKEKSLFISEKGALADKISPGVLRSLVTLTDKSK 166

[Close]

BLAST of Lsi05G021980 vs. TrEMBL
Match: A0A059CIW8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02506 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.1e-69
Identity = 131/166 (78.92%), Postives = 156/166 (93.98%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           M+ETM+QF  SL ELE EAERLLLARN+LVEND++RNGNREALTALR++A TTK SVPSP
Sbjct: 1   MDETMKQFLHSLDELETEAERLLLARNQLVENDKLRNGNREALTALRKKAHTTKTSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FES+MK++GGS SRPLV+E+CTTCGNHDSNERTWMMFPGTD+FA +PFHAAH+IL+ +QS
Sbjct: 61  FESLMKDIGGSGSRPLVREVCTTCGNHDSNERTWMMFPGTDIFAAIPFHAAHSILDEEQS 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDFEAK+LQSYVK++S++IS+KGALADKISPGVL+SLVTLTDK K
Sbjct: 121 QLDFEAKRLQSYVKEKSIVISDKGALADKISPGVLRSLVTLTDKQK 166

[Close]

BLAST of Lsi05G021980 vs. TAIR10
Match: AT3G15351.1 (AT3G15351.1 unknown protein)

HSP 1 Score: 215.7 bits (548), Expect = 2.2e-56
Identity = 103/160 (64.38%), Postives = 135/160 (84.38%), Query Frame = 1


Query: 6   RQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSPFESIM 65
           ++F   L ++EAEA+  LLARN++VEND+ RN NREALTALR+RARTTK SV SPF+S+M
Sbjct: 6   KKFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSPFDSMM 65

Query: 66  KEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQSKLDFE 125
           K++ GS ++PLV+E+C+TCG+HDS+E TWMM PG D+FA +PFHA HT+LE D+ K++FE
Sbjct: 66  KDIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGADLFAAIPFHAVHTMLEKDEEKMEFE 125

Query: 126 AKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKP 166
           +KKLQS VK+++L ISE GALAD ISPGV++SLV L DKP
Sbjct: 126 SKKLQSLVKEKALFISELGALADGISPGVIRSLVALEDKP 165

[Close]

BLAST of Lsi05G021980 vs. NCBI nr
Match: gi|659074783|ref|XP_008437793.1| (PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 1.7e-82
Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTK+SVPS 
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKSSVPSS 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEVGG+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS
Sbjct: 61  FESIMKEVGGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 166

[Close]

BLAST of Lsi05G021980 vs. NCBI nr
Match: gi|449431974|ref|XP_004133775.1| (PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           MNETMRQFQQSLIELEAEAERLLLAR+ELVENDRVRNGNREALTALRRRARTTK+SVPSP
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQ+
Sbjct: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQT 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 166

[Close]

BLAST of Lsi05G021980 vs. NCBI nr
Match: gi|700201229|gb|KGN56362.1| (hypothetical protein Csa_3G117970 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 1.4e-81
Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           MNETMRQFQQSLIELEAEAERLLLAR+ELVENDRVRNGNREALTALRRRARTTK+SVPSP
Sbjct: 87  MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 146

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQ+
Sbjct: 147 FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQT 206

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 207 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 252

[Close]

BLAST of Lsi05G021980 vs. NCBI nr
Match: gi|1009143797|ref|XP_015889451.1| (PREDICTED: uncharacterized protein LOC107424226 [Ziziphus jujuba])

HSP 1 Score: 283.5 bits (724), Expect = 2.4e-73
Identity = 142/164 (86.59%), Postives = 154/164 (93.90%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           M+ETM+QFQQSLIELE EAE LL AR++LVE DR+RNGNREALTALR+RARTTK SVPSP
Sbjct: 1   MDETMKQFQQSLIELETEAEHLLSARHQLVETDRMRNGNREALTALRKRARTTKTSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIM+E+GGS SRPLVKE+C TCGNHDSNERTWM+FPGTDVFARVPFHAAHTILETDQ 
Sbjct: 61  FESIMREIGGSNSRPLVKEVCATCGNHDSNERTWMVFPGTDVFARVPFHAAHTILETDQD 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDK 165
           +LDFE KKLQSYVKD+SLLISEKGALADKISPGVL SLVTLTDK
Sbjct: 121 RLDFETKKLQSYVKDKSLLISEKGALADKISPGVLNSLVTLTDK 164

[Close]

BLAST of Lsi05G021980 vs. NCBI nr
Match: gi|703072343|ref|XP_010089260.1| (hypothetical protein L484_021790 [Morus notabilis])

HSP 1 Score: 280.0 bits (715), Expect = 2.6e-72
Identity = 138/166 (83.13%), Postives = 157/166 (94.58%), Query Frame = 1


Query: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKASVPSP 60
           M+ETM++FQQ L+ELE EAERLLLAR++LVEND+ RNGNREALTALR+RARTTK S+ SP
Sbjct: 1   MDETMKEFQQQLVELETEAERLLLARHQLVENDKGRNGNREALTALRKRARTTKTSILSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIM+E+GG ESRPLVKE+C+TCGNHDS+ERTWMMFPGTDVFAR+PFHAAHTILETDQ 
Sbjct: 61  FESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTDVFARIPFHAAHTILETDQE 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDFEAK LQ+YVKD+SLLISE+GALADKISPGVLKSLVTLTDK K
Sbjct: 121 RLDFEAKNLQTYVKDKSLLISERGALADKISPGVLKSLVTLTDKRK 166

The following BLAST results are available for this feature:

BLAST of Lsi05G021980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G021980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6Z1_CUCSA	9.7e-82	95.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1	[more]
W9QHV2_9ROSA	1.8e-72	83.13	Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1	[more]
V4U8R1_9ROSI	2.9e-70	81.93	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022588mg PE=4 SV=1	[more]
A0A067H1A3_CITSI	5.0e-70	81.93	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031062mg PE=4 SV=1	[more]
A0A059CIW8_EUCGR	1.1e-69	78.92	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D02506 PE=4 SV=1	[more]

BLAST of Lsi05G021980 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15351.1	2.2e-56	64.38	unknown protein	[more]

BLAST of Lsi05G021980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074783\|ref\|XP_008437793.1\|	1.7e-82	96.99	PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo]	[more]
gi\|449431974\|ref\|XP_004133775.1\|	1.4e-81	95.78	PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus]	[more]
gi\|700201229\|gb\|KGN56362.1\|	1.4e-81	95.78	hypothetical protein Csa_3G117970 [Cucumis sativus]	[more]
gi\|1009143797\|ref\|XP_015889451.1\|	2.4e-73	86.59	PREDICTED: uncharacterized protein LOC107424226 [Ziziphus jujuba]	[more]
gi\|703072343\|ref\|XP_010089260.1\|	2.6e-72	83.13	hypothetical protein L484_021790 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G021980.1	Lsi05G021980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 5..32 scor
None	No IPR available	PANTHER	PTHR21162	P53 AND DNA DAMAGE-REGULATED PROTEIN	coord: 87..166 score: 3.9E-54coord: 1..56 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G021980	Csa3G117970	Cucumber (Chinese Long) v2	culsiB209
Lsi05G021980	CSPI03G07330	Wild cucumber (PI 183967)	cpilsiB207
Lsi05G021980	Cucsa.259790	Cucumber (Gy14) v1	cgylsiB415
Lsi05G021980	CmaCh06G009670	Cucurbita maxima (Rimu)	cmalsiB766
Lsi05G021980	CmoCh06G009900	Cucurbita moschata (Rifu)	cmolsiB758
Lsi05G021980	CmoCh14G022220	Cucurbita moschata (Rifu)	cmolsiB233
Lsi05G021980	Cla021096	Watermelon (97103) v1	lsiwmB365
Lsi05G021980	MELO3C005967	Melon (DHL92) v3.5.1	lsimeB378
Lsi05G021980	ClCG05G000300	Watermelon (Charleston Gray)	lsiwcgB335
Lsi05G021980	MELO3C005967.2	Melon (DHL92) v3.6.1	lsimedB396
Lsi05G021980	Bhi01G000428	Wax gourd	lsiwgoB433
Lsi05G021980	Cp4.1LG08g00390	Cucurbita pepo (Zucchini)	cpelsiB714
Lsi05G021980	Cp4.1LG03g15740	Cucurbita pepo (Zucchini)	cpelsiB506
Lsi05G021980	Carg24167	Silver-seed gourd	carlsiB088
Lsi05G021980	Carg17676	Silver-seed gourd	carlsiB119

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G021980	Cucumber (Chinese Long) v3	cuclsiB228
Lsi05G021980	Watermelon (97103) v2	lsiwmbB333
Lsi05G021980	Cucurbita maxima (Rimu)	cmalsiB245
Lsi05G021980	Cucumber (Gy14) v2	cgyblsiB196