Carg17676 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17676
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	p53 and DNA damage-regulated protein
Location	Cucurbita_argyrosperma_scaffold_119 : 766199 .. 767274 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCACAGTGACAACTTTCATTTCTTCATATTTGTTTTGGGAGTCTGAAAGATTCTCTCTGTATATTACATGTTTGGACGTTATTGACGATGTCTCAGAGTGAATTTTAGGTTGGAAAAAATGAATGAGACGATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAAGTAAGCTTAAACATATTTGAAGTTTGGCAACTTGGCTTACAAGATTACTTGTATTTCCTCCTCGCAATATACGCTCTTTGCCACTTAAATTGAAATTGCAGTGTCAAAATTTGTCTATCATTGAAATGAAACTGCTCTCTATCTTTGAGAGTTCAAAAAGGTAAAGTAACCACTGTTGTTTGGCGTTAAAATTTCAGTTGGTTGAAAACGATAGAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAAGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGGTTATTGATGGGATTTTTTTTTTCATGCTATTAATTTTATGTCATTTATTAGTGCATGACTCTTTAAGAGATAATATATTAGACTTCATTGAAACATATGCATTTCCGTGTTCACTGGACTCCCTTTTAAAGAATACAATAGTCAGCCTATAATTTTCTCTGGGAACGTTCATTTCATTCACTTGGACTTTGTGGAGCTTTCACTTTATTTTGACAGTTGAATTATTGTTTCTGGTCTGTATCCCTTTCACATGGCAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTAGTGACATTGACAGACAAACCAAAATGA

mRNA sequence

TCTCACAGTGACAACTTTCATTTCTTCATATTTGTTTTGGGAGTCTGAAAGATTCTCTCTGTATATTACATGTTTGGACGTTATTGACGATGTCTCAGAGTGAATTTTAGGTTGGAAAAAATGAATGAGACGATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAATTGGTTGAAAACGATAGAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAAGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTAGTGACATTGACAGACAAACCAAAATGA

Coding sequence (CDS)

ATGAATGAGACGATGAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAATTGGTTGAAAACGATAGAGTGAGAAATGGGAATAGAGAAGCATTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAAGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGCGCACATGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTAGTGACATTGACAGACAAACCAAAATGA

Protein sequence

MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK

Homology

[Close]

BLAST of Carg17676 vs. NCBI nr
Match: XP_022924314.1 (uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924315.1 uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924316.1 uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924317.1 uncharacterized protein LOC111431844 [Cucurbita moschata])

HSP 1 Score: 320.1 bits (819), Expect = 4.5e-84
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIM+EVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS
Sbjct: 61  FESIMREVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 166

[Close]

BLAST of Carg17676 vs. NCBI nr
Match: XP_008437793.1 (PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo] >XP_008437794.1 PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo] >XP_008437795.1 PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo] >XP_008437797.1 PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo] >XP_016899128.1 PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 3.2e-82
Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPS 
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKSSVPSS 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEVGG+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS
Sbjct: 61  FESIMKEVGGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 166

[Close]

BLAST of Carg17676 vs. NCBI nr
Match: XP_022979536.1 (uncharacterized protein LOC111479212 [Cucurbita maxima] >XP_022979537.1 uncharacterized protein LOC111479212 [Cucurbita maxima])

HSP 1 Score: 312.8 bits (800), Expect = 7.2e-82
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEVGGSESR LVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETD+S
Sbjct: 61  FESIMKEVGGSESRLLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDES 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDK K
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKRK 166

[Close]

BLAST of Carg17676 vs. NCBI nr
Match: XP_004133775.1 (PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus] >XP_011650640.1 PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 2.7e-81
Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLL+AR+ELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQ+
Sbjct: 61  FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQT 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 166

[Close]

BLAST of Carg17676 vs. NCBI nr
Match: KGN56362.1 (hypothetical protein Csa_3G117970 [Cucumis sativus])

HSP 1 Score: 310.8 bits (795), Expect = 2.7e-81
Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLL+AR+ELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 87  MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 146

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQ+
Sbjct: 147 FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQT 206

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 207 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 252

[Close]

BLAST of Carg17676 vs. TAIR10
Match: AT3G15351.1 (unknown protein)

HSP 1 Score: 214.9 bits (546), Expect = 3.7e-56
Identity = 102/160 (63.75%), Postives = 136/160 (85.00%), Query Frame = 0


Query: 6   RQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIM 65
           ++F   L ++EAEA+  L+ARN++VEND+ RN NREALTALR+RARTTK+SV SPF+S+M
Sbjct: 6   KKFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSPFDSMM 65

Query: 66  KEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQSKLDFE 125
           K++ GS ++PLV+E+C+TCG+HDS+E TWMM PG D+FA +PFHA HT+LE D+ K++FE
Sbjct: 66  KDIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGADLFAAIPFHAVHTMLEKDEEKMEFE 125

Query: 126 AKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKP 166
           +KKLQS VK+++L ISE GALAD ISPGV++SLV L DKP
Sbjct: 126 SKKLQSLVKEKALFISELGALADGISPGVIRSLVALEDKP 165

[Close]

BLAST of Carg17676 vs. TrEMBL
Match: tr|A0A1S3AVF7|A0A1S3AVF7_CUCME (uncharacterized protein LOC103483126 OS=Cucumis melo OX=3656 GN=LOC103483126 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.1e-82
Identity = 161/166 (96.99%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPS 
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKSSVPSS 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEVGG+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS
Sbjct: 61  FESIMKEVGGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 166

[Close]

BLAST of Carg17676 vs. TrEMBL
Match: tr|A0A0A0L6Z1|A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117970 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-81
Identity = 159/166 (95.78%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           MNETMRQFQQSLIELEAEAERLL+AR+ELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 87  MNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVPSP 146

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMKEV G+ESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQ+
Sbjct: 147 FESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQT 206

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTLTDKPK
Sbjct: 207 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 252

[Close]

BLAST of Carg17676 vs. TrEMBL
Match: tr|A0A2I4HD77|A0A2I4HD77_9ROSI (uncharacterized protein LOC109016117 OS=Juglans regia OX=51240 GN=LOC109016117 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 3.4e-72
Identity = 136/166 (81.93%), Postives = 159/166 (95.78%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+ETM++FQ+SL E+EAEAE LL+AR++LVENDRVRNGNREALTALR+RARTTK+SVPSP
Sbjct: 1   MDETMKKFQESLTEIEAEAEHLLLARHQLVENDRVRNGNREALTALRKRARTTKTSVPSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIMK++GG ES+PLVKE+C TCGNHDSNERTWMMFPGTDVFAR+PFHAAHTILE DQ+
Sbjct: 61  FESIMKDIGGPESKPLVKEVCATCGNHDSNERTWMMFPGTDVFARIPFHAAHTILEKDQA 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDF+ K+LQSYVK++SLLISE GALADKISPGVLKS+VTL+DKPK
Sbjct: 121 QLDFDGKQLQSYVKEKSLLISEMGALADKISPGVLKSIVTLSDKPK 166

[Close]

BLAST of Carg17676 vs. TrEMBL
Match: tr|W9QHV2|W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021790 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 5.8e-72
Identity = 137/166 (82.53%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+ETM++FQQ L+ELE EAERLL+AR++LVEND+ RNGNREALTALR+RARTTK+S+ SP
Sbjct: 1   MDETMKEFQQQLVELETEAERLLLARHQLVENDKGRNGNREALTALRKRARTTKTSILSP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIM+E+GG ESRPLVKE+C+TCGNHDS+ERTWMMFPGTDVFAR+PFHAAHTILETDQ 
Sbjct: 61  FESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTDVFARIPFHAAHTILETDQE 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDFEAK LQ+YVKD+SLLISE+GALADKISPGVLKSLVTLTDK K
Sbjct: 121 RLDFEAKNLQTYVKDKSLLISERGALADKISPGVLKSLVTLTDKRK 166

[Close]

BLAST of Carg17676 vs. TrEMBL
Match: tr|A0A2P4LLA5|A0A2P4LLA5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41943 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 8.4e-71
Identity = 131/166 (78.92%), Postives = 158/166 (95.18%), Query Frame = 0


Query: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60
           M+ETM+QFQ+ LIELE EAE LL+AR++LVENDRVRNGNREALTALR+RARTTK+SV SP
Sbjct: 1   MDETMKQFQEGLIELETEAEHLLLARHQLVENDRVRNGNREALTALRKRARTTKTSVASP 60

Query: 61  FESIMKEVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120
           FESIM+++GG ESRPLVKE+CTTCGNHDSNERTWMMFPGTD+  R+PFHAAHTILETDQ+
Sbjct: 61  FESIMRDIGGPESRPLVKEVCTTCGNHDSNERTWMMFPGTDLIGRIPFHAAHTILETDQA 120

Query: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 167
           +LDF+AK+LQSY+K++S LISE+GA+AD+ISPGVLKS++TL+DKPK
Sbjct: 121 QLDFDAKRLQSYMKEKSFLISERGAIADRISPGVLKSIITLSDKPK 166

The following BLAST results are available for this feature:

BLAST of Carg17676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924314.1	4.5e-84	99.40	uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924315.1 unchar...	[more]
XP_008437793.1	3.2e-82	96.99	PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo] >XP_008437794.1 P...	[more]
XP_022979536.1	7.2e-82	98.19	uncharacterized protein LOC111479212 [Cucurbita maxima] >XP_022979537.1 uncharac...	[more]
XP_004133775.1	2.7e-81	95.78	PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus] >XP_011650640....	[more]
KGN56362.1	2.7e-81	95.78	hypothetical protein Csa_3G117970 [Cucumis sativus]	[more]

BLAST of Carg17676 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15351.1	3.7e-56	63.75	unknown protein	[more]

BLAST of Carg17676 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg17676 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVF7\|A0A1S3AVF7_CUCME	2.1e-82	96.99	uncharacterized protein LOC103483126 OS=Cucumis melo OX=3656 GN=LOC103483126 PE=...	[more]
tr\|A0A0A0L6Z1\|A0A0A0L6Z1_CUCSA	1.8e-81	95.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117970 PE=4 SV=1	[more]
tr\|A0A2I4HD77\|A0A2I4HD77_9ROSI	3.4e-72	81.93	uncharacterized protein LOC109016117 OS=Juglans regia OX=51240 GN=LOC109016117 P...	[more]
tr\|W9QHV2\|W9QHV2_9ROSA	5.8e-72	82.53	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021790 PE=4 SV=1	[more]
tr\|A0A2P4LLA5\|A0A2P4LLA5_QUESU	8.4e-71	78.92	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41943 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR030482	PDRG1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17676-RA	Carg17676-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 5..32
IPR030482	p53 and DNA damage-regulated protein 1	PANTHER	PTHR21162	P53 AND DNA DAMAGE-REGULATED PROTEIN	coord: 1..166

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17676	Cla021096	Watermelon (97103) v1	carwmB0130
Carg17676	Csa3G117970	Cucumber (Chinese Long) v2	carcuB0145
Carg17676	MELO3C005967	Melon (DHL92) v3.5.1	carmeB0138
Carg17676	ClCG05G000300	Watermelon (Charleston Gray)	carwcgB0128
Carg17676	CSPI03G07330	Wild cucumber (PI 183967)	carcpiB0149
Carg17676	Cucsa.259790	Cucumber (Gy14) v1	carcgyB0165
Carg17676	CmaCh06G009670	Cucurbita maxima (Rimu)	carcmaB0177
Carg17676	CmoCh06G009900	Cucurbita moschata (Rifu)	carcmoB0185
Carg17676	CmoCh14G022220	Cucurbita moschata (Rifu)	carcmoB0182
Carg17676	Lsi05G021980	Bottle gourd (USVL1VR-Ls)	carlsiB119
Carg17676	Cp4.1LG03g15740	Cucurbita pepo (Zucchini)	carcpeB0192
Carg17676	Cp4.1LG08g00390	Cucurbita pepo (Zucchini)	carcpeB0194
Carg17676	MELO3C005967.2	Melon (DHL92) v3.6.1	carmedB0142
Carg17676	Bhi01G000428	Wax gourd	carwgoB0166

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17676	Carg24167	Silver-seed gourd	carcarB109

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17676	Cucumber (Gy14) v2	carcgybB0143
Carg17676	Cucurbita maxima (Rimu)	carcmaB0173
Carg17676	Cucumber (Chinese Long) v3	carcucB0153
Carg17676	Watermelon (97103) v2	carwmbB0138