Carg24167 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24167
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	p53 and DNA damage-regulated protein
Location	Cucurbita_argyrosperma_scaffold_221 : 91730 .. 94880 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAGAAAGCCCTAAGCCCTTTCTTCTTCTTCTTCCTCCTCTTCACGCCGGCTACTCCTCCCATTCAGCAGCGTAGTGTCGCCGTCGCCGTCGCCGTGTCCGTCTTAGCGGCCTGCAGTGGTCCATTGTTGCTTCTGGTATTTTCTCAATCTCCATCTATATCGTTTGTTCTGACTTGAAAAACTAAAATTAGGACTTGTCTAACCAAAGAAAGAATAATACTAGAAGGTACAGTTAGAATTTTTCAAGTTCCAGAATTCTCTCTCTAGGCCTTCATCTCCTCAAACACAACGTCCATCCAATTCAAATCAATATGAATTGAACAGAAACAGAACAATCCTTGTTTCCCAATCTTAGTCAGAGAATATTAGCGGGAAGAAGTATTCTGCTTGATGCTGGCAAGTGCAACGCCGAGCAAAGTCTACGGATATCATTGAAGAGACGAAACGCTTTTCCTTGAGTATTACATTTTTTTTTTCGTTCATTCCAATTTTGATTGGTTTTAGGAATTGGGTGAGAGAGCGATGAAGAAGAGCATTGCTAATGGCACAAGTTGTCAGTAGTGAAGCTGGTGATTCTTGTTTGTCTGTGTGAACTTGACAATCTCTCTCTCTCAGTCACAACTTACATTTTTATAGGAAAGATGTATACTTTGTTCGGATCGATTTGTTGCGTTCTTTGTTAGTAGGTGGAGGAAGACCTTTGACCACATTATTTGGAGTGGCAAATTTTCTCGGACAGTTTGGAATTCCTCTTTTGAGGTGTTTAGCTTGTAGTTTGCTAGACACAGAGGGCTCCAAGCGATGATCGATTCGTTATCTGCCCTCTCAAAAGATTGGGAAGTTCTTGTAGCAGGCAAGGGGTTTGCGCTGTTTCATGGGGTTTGTGGGGTGAGAGGAGGTCTCCTAGTTATATATAGTCCCTTGCTAGGTTCTATGATTCTCTTTGGGCGTTGATGACATGGTTGTTTGTATATTATTCTTGAGGCCTCATTGTATTTGATTGGAACCCCTTTCTTTACTGGGGTTCCTTTTGAATGCTCGTGTATTCTTTCATTTTTTTTTCTCAATGAAGCTCTCTTCTTCATTAAAAAAAAAAACTTGCACTTTTCATATTCATTTTGGGAGTCATTCTCTCTGTATGCTACCTGTTTGGATGTTATTGACGACCTCACTTGTGAATTATAGGTGGGAATAAAATGAACGAGACAATGATACAATTTCAAAAGAGCTTAATTGAGCTAGAAGCGGAAGCAGAGCGTCTCCTTATAGCCCGCAATGAGGTAAGTGTAAAAACATTGGAAAATTAGCAACTTAGCTTACGAGATGACTTGTATTTCCTCCTCCTATATACATTCCTTGTGACGTTCATTGAAATTGAATGTTACAACTTGTCTATCGTTGAAATGAAATTGTTCTATAACTTTGAGAAGCAAAAAGGTGAAGTGACTACTGTTGTTTGGGATTATAATGTCAGTTGGTTGAAAATGATAGAGTGAGAAATGGTAATAGAGAAGCGTTGACTGCTTTGAGGAGGCGAGCACGGACAACAAAATCCAGTGTCCCATCACCTTTTGAGTCAATTATGAAGGATATGGGAGGTTCTGAAACAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGCACCTGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTTCCATTTCATGCAGCTCATTCAATCTTGGAGACAGGTTATTACTGGGACATTTTATTTCATGCTGTTAATGTTATGTATGTATTTATTGGTGCATGGCTCTCATTAGGAAATAATCCATTAGACTAAATTAAAATGGTTGCAATTCCATGTTCATTCTGCTCCCTGTAATGGCTATAATTGAATCCTCAGAGTTTCATGTTGAATAATCCAAAAGGTTTCTCTTAAGTTGGATGGGACAGCAGGAGGACCGGGGTGGTGTGTGTTCTTGTGTTAGACGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAGCTCTCATGGCTTTATTTTGGGCTTCCCCAAAAGGCCTTATACCAATGGAGAGAGTATTTCTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGTTGTGGGATTTTCATCATCCCACACCTCCCCTCGAACAAAGTACGTCTCCCCTTAATCGAGTCTCGACTCCTTTGGAGTCTTAGTCATTTTTTACTATGCCTTCGAGGAGGCTTGACTCCTTTTCTTTTGAAGTCCTTTGTTCGACATTTGAAGATTTACCAATTTATTGGCACGACTAAGCTTAGGGCATGACTCTGATACCATGTTAGGAATCACAGATCTCCACAATAGTATGATATTGTCCACTTTGAGCATAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGAGAGTATTTTTTTTATTATAAACCCATGATCATTCCCAATTAGCCGATGTGTGACTTTCATCATCCTACAGTTTGCAGTCCGTCTATAATTTGCCACTGGGAACATTCACTCACTTGTACTCTGTAGAGCTTTCACTTTATTTTGACAGACACATTATTGTTTTCACATGGCAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTGCAAAGTTTTGTGAAAGATCAGTCCCTTCTGATCTCAGAAAAAGGGGTCCTCTCTGACAAGATCAGTCCCGGGGTGCTCAAGGCTTTAGTGACATTGACAGACAAACCCAAATGATTTTGCCTATCTATTTTGCCATTCATACTCCAATATGAATAAGGAGATGGATATTGCGTTCATCCAGGATCCTTGTTGCTGTGGCTTGGATGGAGGGCTGATTCTCATGGAAGCGTTGAAAACATCCCAAGTACATCATCTTTCACTTGTTACTATTTTGATTATTCATTTACTTGTGCATGCTGGGTAGCATTATCATAGATCATATCTCCGAGATTGATGGGATTCTGGACTTATCTGATTGGCATATATGTACTCTCTAAATTATTCTGCGCACAGCATCTGCATTACAATTTTAGCTTCATTCGGTTGAGGATTATTGAAAATAAATAATTAAGAGGAAGATCATGAGTATATAACTAAGGAATACATCTCCATTGGTATTGGTG

mRNA sequence

AAAGAGAAAGCCCTAAGCCCTTTCTTCTTCTTCTTCCTCCTCTTCACGCCGGCTACTCCTCCCATTCAGCAGCGTAGTGTCGCCGTCGCCGTCGCCGTGTCCGTCTTAGCGGCCTGCAGTGGTCCATTGTTGCTTCTGTTTGCTAGACACAGAGGGCTCCAAGCGATGATCGATTCGTTATCTGCCCTCTCAAAAGATTGGGAAGTTCTTGTAGCAGGCAAGGGGTTTGCGCTGTTTCATGGGGTTTGTGGGGTGAGAGGAGGTGGGAATAAAATGAACGAGACAATGATACAATTTCAAAAGAGCTTAATTGAGCTAGAAGCGGAAGCAGAGCGTCTCCTTATAGCCCGCAATGAGTTGGTTGAAAATGATAGAGTGAGAAATGGTAATAGAGAAGCGTTGACTGCTTTGAGGAGGCGAGCACGGACAACAAAATCCAGTGTCCCATCACCTTTTGAGTCAATTATGAAGGATATGGGAGGTTCTGAAACAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGCACCTGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTTCCATTTCATGCAGCTCATTCAATCTTGGAGACAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTGCAAAGTTTTGTGAAAGATCAGTCCCTTCTGATCTCAGAAAAAGGGGTCCTCTCTGACAAGATCAGTCCCGGGGTGCTCAAGGCTTTAGTGACATTGACAGACAAACCCAAATGATTTTGCCTATCTATTTTGCCATTCATACTCCAATATGAATAAGGAGATGGATATTGCGTTCATCCAGGATCCTTGTTGCTGTGGCTTGGATGGAGGGCTGATTCTCATGGAAGCGTTGAAAACATCCCAAGTACATCATCTTTCACTTGTTACTATTTTGATTATTCATTTACTTGTGCATGCTGGGTAGCATTATCATAGATCATATCTCCGAGATTGATGGGATTCTGGACTTATCTGATTGGCATATATGTACTCTCTAAATTATTCTGCGCACAGCATCTGCATTACAATTTTAGCTTCATTCGGTTGAGGATTATTGAAAATAAATAATTAAGAGGAAGATCATGAGTATATAACTAAGGAATACATCTCCATTGGTATTGGTG

Coding sequence (CDS)

AAAGAGAAAGCCCTAAGCCCTTTCTTCTTCTTCTTCCTCCTCTTCACGCCGGCTACTCCTCCCATTCAGCAGCGTAGTGTCGCCGTCGCCGTCGCCGTGTCCGTCTTAGCGGCCTGCAGTGGTCCATTGTTGCTTCTGTTTGCTAGACACAGAGGGCTCCAAGCGATGATCGATTCGTTATCTGCCCTCTCAAAAGATTGGGAAGTTCTTGTAGCAGGCAAGGGGTTTGCGCTGTTTCATGGGGTTTGTGGGGTGAGAGGAGGTGGGAATAAAATGAACGAGACAATGATACAATTTCAAAAGAGCTTAATTGAGCTAGAAGCGGAAGCAGAGCGTCTCCTTATAGCCCGCAATGAGTTGGTTGAAAATGATAGAGTGAGAAATGGTAATAGAGAAGCGTTGACTGCTTTGAGGAGGCGAGCACGGACAACAAAATCCAGTGTCCCATCACCTTTTGAGTCAATTATGAAGGATATGGGAGGTTCTGAAACAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAACCATGACTCTAATGAGCGCACCTGGATGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTTCCATTTCATGCAGCTCATTCAATCTTGGAGACAGATCAGTCGAAACTTGATTTTGAGGCAAAGAAATTGCAAAGTTTTGTGAAAGATCAGTCCCTTCTGATCTCAGAAAAAGGGGTCCTCTCTGACAAGATCAGTCCCGGGGTGCTCAAGGCTTTAGTGACATTGACAGACAAACCCAAATGA

Protein sequence

KEKALSPFFFFFLLFTPATPPIQQRSVAVAVAVSVLAACSGPLLLLFARHRGLQAMIDSLSALSKDWEVLVAGKGFALFHGVCGVRGGGNKMNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQSKLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK

Homology

[Close]

BLAST of Carg24167 vs. NCBI nr
Match: XP_022944864.1 (uncharacterized protein LOC111449262 isoform X1 [Cucurbita moschata])

HSP 1 Score: 322.4 bits (825), Expect = 1.4e-84
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           MNETMIQFQ+SLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMIQFQQSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS
Sbjct: 61  FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK
Sbjct: 121 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 166

[Close]

BLAST of Carg24167 vs. NCBI nr
Match: XP_022974246.1 (uncharacterized protein LOC111472882 isoform X1 [Cucurbita maxima])

HSP 1 Score: 319.7 bits (818), Expect = 9.1e-84
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           MNETMIQFQ+SLIELE EAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMIQFQQSLIELETEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS
Sbjct: 61  FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           KLDFEAKKLQSFVKDQSLLISEKGVL+DKISPGVLKALVTLTDKPK
Sbjct: 121 KLDFEAKKLQSFVKDQSLLISEKGVLADKISPGVLKALVTLTDKPK 166

[Close]

BLAST of Carg24167 vs. NCBI nr
Match: XP_023538656.1 (uncharacterized protein LOC111799532 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 319.7 bits (818), Expect = 9.1e-84
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           MNETMIQFQ+SLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMIQFQQSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS
Sbjct: 61  FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           KLDFEAKKLQSFVK+QSLLISEKGVL+DKISPGVLKALVTLTDKPK
Sbjct: 121 KLDFEAKKLQSFVKEQSLLISEKGVLADKISPGVLKALVTLTDKPK 166

[Close]

BLAST of Carg24167 vs. NCBI nr
Match: XP_022924314.1 (uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924315.1 uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924316.1 uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924317.1 uncharacterized protein LOC111431844 [Cucurbita moschata])

HSP 1 Score: 307.4 bits (786), Expect = 4.7e-80
Identity = 154/166 (92.77%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           MNETM QFQ+SLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPSP
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLVARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIM+++GGSE+RPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAH+ILETDQS
Sbjct: 61  FESIMREVGGSESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           KLDFEAKKLQS+VKDQSLLISEKG L+DKISPGVLK+LVTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK 166

[Close]

BLAST of Carg24167 vs. NCBI nr
Match: KGN56362.1 (hypothetical protein Csa_3G117970 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 1.8e-79
Identity = 153/168 (91.07%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 90  NKMNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVP 149
           NKMNETM QFQ+SLIELEAEAERLL+AR+ELVENDRVRNGNREALTALRRRARTTKSSVP
Sbjct: 85  NKMNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVP 144

Query: 150 SPFESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETD 209
           SPFESIMK++ G+E+RPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAH+ILETD
Sbjct: 145 SPFESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETD 204

Query: 210 QSKLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           Q+KLDFEAKKLQS+VKDQSLLISEKG L+DKISPGVLKA+VTLTDKPK
Sbjct: 205 QTKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 252

[Close]

BLAST of Carg24167 vs. TAIR10
Match: AT3G15351.1 (unknown protein)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-55
Identity = 100/159 (62.89%), Postives = 134/159 (84.28%), Query Frame = 0


Query: 98  QFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSPFESIMK 157
           +F   L ++EAEA+  L+ARN++VEND+ RN NREALTALR+RARTTK+SV SPF+S+MK
Sbjct: 7   KFAALLDKIEAEADEFLLARNQMVENDKERNANREALTALRKRARTTKTSVMSPFDSMMK 66

Query: 158 DMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQSKLDFEA 217
           D+ GS T+PLV+E+C+TCG+HDS+E TWMM PG D+FA +PFHA H++LE D+ K++FE+
Sbjct: 67  DIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGADLFAAIPFHAVHTMLEKDEEKMEFES 126

Query: 218 KKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKP 257
           KKLQS VK+++L ISE G L+D ISPGV+++LV L DKP
Sbjct: 127 KKLQSLVKEKALFISELGALADGISPGVIRSLVALEDKP 165

[Close]

BLAST of Carg24167 vs. TrEMBL
Match: tr|A0A0A0L6Z1|A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117970 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.2e-79
Identity = 153/168 (91.07%), Postives = 165/168 (98.21%), Query Frame = 0


Query: 90  NKMNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVP 149
           NKMNETM QFQ+SLIELEAEAERLL+AR+ELVENDRVRNGNREALTALRRRARTTKSSVP
Sbjct: 85  NKMNETMRQFQQSLIELEAEAERLLLARDELVENDRVRNGNREALTALRRRARTTKSSVP 144

Query: 150 SPFESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETD 209
           SPFESIMK++ G+E+RPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAH+ILETD
Sbjct: 145 SPFESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETD 204

Query: 210 QSKLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           Q+KLDFEAKKLQS+VKDQSLLISEKG L+DKISPGVLKA+VTLTDKPK
Sbjct: 205 QTKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 252

[Close]

BLAST of Carg24167 vs. TrEMBL
Match: tr|A0A1S3AVF7|A0A1S3AVF7_CUCME (uncharacterized protein LOC103483126 OS=Cucumis melo OX=3656 GN=LOC103483126 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.6e-79
Identity = 153/166 (92.17%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           MNETM QFQ+SLIELEAEAERLL+ARNELVENDRVRNGNREALTALRRRARTTKSSVPS 
Sbjct: 1   MNETMRQFQQSLIELEAEAERLLLARNELVENDRVRNGNREALTALRRRARTTKSSVPSS 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIMK++GG+E+RPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAH+ILETDQS
Sbjct: 61  FESIMKEVGGAESRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHTILETDQS 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           KLDFEAKKLQS+VKDQSLLISEKG L+DKISPGVLKA+VTLTDKPK
Sbjct: 121 KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTLTDKPK 166

[Close]

BLAST of Carg24167 vs. TrEMBL
Match: tr|A0A2I4HD77|A0A2I4HD77_9ROSI (uncharacterized protein LOC109016117 OS=Juglans regia OX=51240 GN=LOC109016117 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.9e-70
Identity = 131/166 (78.92%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           M+ETM +FQ+SL E+EAEAE LL+AR++LVENDRVRNGNREALTALR+RARTTK+SVPSP
Sbjct: 1   MDETMKKFQESLTEIEAEAEHLLLARHQLVENDRVRNGNREALTALRKRARTTKTSVPSP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIMKD+GG E++PLVKE+C TCGNHDSNERTWMMFPGTDVFAR+PFHAAH+ILE DQ+
Sbjct: 61  FESIMKDIGGPESKPLVKEVCATCGNHDSNERTWMMFPGTDVFARIPFHAAHTILEKDQA 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           +LDF+ K+LQS+VK++SLLISE G L+DKISPGVLK++VTL+DKPK
Sbjct: 121 QLDFDGKQLQSYVKEKSLLISEMGALADKISPGVLKSIVTLSDKPK 166

[Close]

BLAST of Carg24167 vs. TrEMBL
Match: tr|W9QHV2|W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021790 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 129/166 (77.71%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           M+ETM +FQ+ L+ELE EAERLL+AR++LVEND+ RNGNREALTALR+RARTTK+S+ SP
Sbjct: 1   MDETMKEFQQQLVELETEAERLLLARHQLVENDKGRNGNREALTALRKRARTTKTSILSP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIM+++GG E+RPLVKE+C+TCGNHDS+ERTWMMFPGTDVFAR+PFHAAH+ILETDQ 
Sbjct: 61  FESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTDVFARIPFHAAHTILETDQE 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           +LDFEAK LQ++VKD+SLLISE+G L+DKISPGVLK+LVTLTDK K
Sbjct: 121 RLDFEAKNLQTYVKDKSLLISERGALADKISPGVLKSLVTLTDKRK 166

[Close]

BLAST of Carg24167 vs. TrEMBL
Match: tr|A0A2P4LLA5|A0A2P4LLA5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41943 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.2e-68
Identity = 126/166 (75.90%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 92  MNETMIQFQKSLIELEAEAERLLIARNELVENDRVRNGNREALTALRRRARTTKSSVPSP 151
           M+ETM QFQ+ LIELE EAE LL+AR++LVENDRVRNGNREALTALR+RARTTK+SV SP
Sbjct: 1   MDETMKQFQEGLIELETEAEHLLLARHQLVENDRVRNGNREALTALRKRARTTKTSVASP 60

Query: 152 FESIMKDMGGSETRPLVKEICTTCGNHDSNERTWMMFPGTDVFARVPFHAAHSILETDQS 211
           FESIM+D+GG E+RPLVKE+CTTCGNHDSNERTWMMFPGTD+  R+PFHAAH+ILETDQ+
Sbjct: 61  FESIMRDIGGPESRPLVKEVCTTCGNHDSNERTWMMFPGTDLIGRIPFHAAHTILETDQA 120

Query: 212 KLDFEAKKLQSFVKDQSLLISEKGVLSDKISPGVLKALVTLTDKPK 258
           +LDF+AK+LQS++K++S LISE+G ++D+ISPGVLK+++TL+DKPK
Sbjct: 121 QLDFDAKRLQSYMKEKSFLISERGAIADRISPGVLKSIITLSDKPK 166

The following BLAST results are available for this feature:

BLAST of Carg24167 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944864.1	1.4e-84	99.40	uncharacterized protein LOC111449262 isoform X1 [Cucurbita moschata]	[more]
XP_022974246.1	9.1e-84	98.19	uncharacterized protein LOC111472882 isoform X1 [Cucurbita maxima]	[more]
XP_023538656.1	9.1e-84	98.19	uncharacterized protein LOC111799532 [Cucurbita pepo subsp. pepo]	[more]
XP_022924314.1	4.7e-80	92.77	uncharacterized protein LOC111431844 [Cucurbita moschata] >XP_022924315.1 unchar...	[more]
KGN56362.1	1.8e-79	91.07	hypothetical protein Csa_3G117970 [Cucumis sativus]	[more]

BLAST of Carg24167 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15351.1	1.3e-55	62.89	unknown protein	[more]

BLAST of Carg24167 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24167 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L6Z1\|A0A0A0L6Z1_CUCSA	1.2e-79	91.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G117970 PE=4 SV=1	[more]
tr\|A0A1S3AVF7\|A0A1S3AVF7_CUCME	2.6e-79	92.17	uncharacterized protein LOC103483126 OS=Cucumis melo OX=3656 GN=LOC103483126 PE=...	[more]
tr\|A0A2I4HD77\|A0A2I4HD77_9ROSI	4.9e-70	78.92	uncharacterized protein LOC109016117 OS=Juglans regia OX=51240 GN=LOC109016117 P...	[more]
tr\|W9QHV2\|W9QHV2_9ROSA	1.2e-68	77.71	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021790 PE=4 SV=1	[more]
tr\|A0A2P4LLA5\|A0A2P4LLA5_QUESU	1.2e-68	75.90	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_41943 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR030482	PDRG1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24167-RA	Carg24167-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
IPR030482	p53 and DNA damage-regulated protein 1	PANTHER	PTHR21162	P53 AND DNA DAMAGE-REGULATED PROTEIN	coord: 92..257

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24167	Cla021096	Watermelon (97103) v1	carwmB0094
Carg24167	Csa3G117970	Cucumber (Chinese Long) v2	carcuB0105
Carg24167	MELO3C005967	Melon (DHL92) v3.5.1	carmeB0099
Carg24167	ClCG05G000300	Watermelon (Charleston Gray)	carwcgB0096
Carg24167	CSPI03G07330	Wild cucumber (PI 183967)	carcpiB0110
Carg24167	Cucsa.259790	Cucumber (Gy14) v1	carcgyB0117
Carg24167	CmaCh06G009670	Cucurbita maxima (Rimu)	carcmaB0128
Carg24167	CmaCh14G021510	Cucurbita maxima (Rimu)	carcmaB0127
Carg24167	CmoCh14G022220	Cucurbita moschata (Rifu)	carcmoB0136
Carg24167	CmoCh06G009900	Cucurbita moschata (Rifu)	carcmoB0137
Carg24167	Lsi05G021980	Bottle gourd (USVL1VR-Ls)	carlsiB088
Carg24167	Cp4.1LG08g00390	Cucurbita pepo (Zucchini)	carcpeB0145
Carg24167	Cp4.1LG03g15740	Cucurbita pepo (Zucchini)	carcpeB0144
Carg24167	MELO3C005967.2	Melon (DHL92) v3.6.1	carmedB0101
Carg24167	CsaV3_3G007460	Cucumber (Chinese Long) v3	carcucB0114
Carg24167	Bhi01G000428	Wax gourd	carwgoB0111

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24167	Carg17676	Silver-seed gourd	carcarB109

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24167	Cucumber (Gy14) v2	carcgybB0105
Carg24167	Watermelon (97103) v2	carwmbB0098