Cp4.1LG03g15740 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAAGTAAGCTTAAAAATATTTGAAGTTTGGCAACTTGGCTTACAAGATTACTTGTATTTCCTCCTCGCAATATACGCTCTTTGCCACTTAAATGGAGATTGCAGTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGTGCACATGGACGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGGTTATTGATGGGATTTCTTTTTTCATGCTATTAATTTTATGTCATTTATTAGTGCATGACTCTTTAAGAGATAATATATTAAACTTCATTGAAACATATGCATTTCCGTGTTCACTGGACTCCCTTTTAAAGAATACAATAGTCAGCCTATAATTTTCTTCTGGGAACGTTCATTTCATTCACTTGGACTTTGTGGAGCTTTCACTTTATTTTGACAGTTGAATTATTGTTTCTGGTCTGTATCCCTTTCACATGGCAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTGGTGACGTTGACAGACAAACCAAAATGATTTTGCCATTCCTACTCCAATATGAATGAGGAGGTGGGCATTGAGTTCATCCAGGACCCTTGTTGCTGGTGCTTGGAAAATTCTACCTTTGCTGTGACTTGGATGGAGGACTGATTCTCATTCATGTGTGGAAAACGCAAGTACATTCTTTATCACTTTTTACTGTGTTTACTAATATAATTGTGCGTGATGGGTAGATTTAGAATAGATAATATCTCCAAGTCTTTGCTTCTGTGACAGTTTTGAACTTTCTGTCCAAGTCTGTTTTGGTGCTTGGAGTAGTAAGATGTAAGAATTTAGTCTGA GAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAAGTAAGCTTAAAAATATTTGAAGTTTGGCAACTTGGCTTACAAGATTACTTGTATTTCCTCCTCGCAATATACGCTCTTTGCCACTTAAATGGAGATTGCAGTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGTGCACATGGACGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTGGTGACGTTGACAGACAAACCAAAATGATTTTGCCATTCCTACTCCAATATGAATGAGGAGGTGGGCATTGAGTTCATCCAGGACCCTTGTTGCTGGTGCTTGGAAAATTCTACCTTTGCTGTGACTTGGATGGAGGACTGATTCTCATTCATGTGTGGAAAACGCAAGTACATTCTTTATCACTTTTTACTGTGTTTACTAATATAATTGTGCGTGATGGGTAGATTTAGAATAGATAATATCTCCAAGTCTTTGCTTCTGTGACAGTTTTGAACTTTCTGTCCAAGTCTGTTTTGGTGCTTGGAGTAGTAAGATGTAAGAATTTAGTCTGA ATGGAGATTGCAGTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGTGCACATGGACGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTGGTGACGTTGACAGACAAACCAAAATGA MEIAVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTDVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 8.9e-59 Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 4.3e-53 Identity = 104/125 (83.20%), Postives = 118/125 (94.40%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: V4U8R1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022588mg PE=4 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 7.3e-53 Identity = 104/125 (83.20%), Postives = 117/125 (93.60%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: A0A067H1A3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031062mg PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 1.2e-52 Identity = 104/125 (83.20%), Postives = 117/125 (93.60%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: M5X2L2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012604mg PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 5.3e-51 Identity = 98/125 (78.40%), Postives = 116/125 (92.80%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. TAIR10
Match: AT3G15351.1 (AT3G15351.1 unknown protein) HSP 1 Score: 175.6 bits (444), Expect = 1.9e-44 Identity = 81/124 (65.32%), Postives = 107/124 (86.29%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|659074783|ref|XP_008437793.1| (PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo]) HSP 1 Score: 235.3 bits (599), Expect = 5.8e-59 Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|449431974|ref|XP_004133775.1| (PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus]) HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58 Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|700201229|gb|KGN56362.1| (hypothetical protein Csa_3G117970 [Cucumis sativus]) HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58 Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|1009143797|ref|XP_015889451.1| (PREDICTED: uncharacterized protein LOC107424226 [Ziziphus jujuba]) HSP 1 Score: 219.5 bits (558), Expect = 3.3e-54 Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 1
BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|703072343|ref|XP_010089260.1| (hypothetical protein L484_021790 [Morus notabilis]) HSP 1 Score: 215.3 bits (547), Expect = 6.2e-53 Identity = 104/125 (83.20%), Postives = 118/125 (94.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|