Cp4.1LG03g15740 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG03g15740
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionP53 and DNA damage-regulated protein 1
LocationCp4.1LG03 : 13646943 .. 13648051 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAAGTAAGCTTAAAAATATTTGAAGTTTGGCAACTTGGCTTACAAGATTACTTGTATTTCCTCCTCGCAATATACGCTCTTTGCCACTTAAATGGAGATTGCAGTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGTGCACATGGACGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGGTTATTGATGGGATTTCTTTTTTCATGCTATTAATTTTATGTCATTTATTAGTGCATGACTCTTTAAGAGATAATATATTAAACTTCATTGAAACATATGCATTTCCGTGTTCACTGGACTCCCTTTTAAAGAATACAATAGTCAGCCTATAATTTTCTTCTGGGAACGTTCATTTCATTCACTTGGACTTTGTGGAGCTTTCACTTTATTTTGACAGTTGAATTATTGTTTCTGGTCTGTATCCCTTTCACATGGCAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTGGTGACGTTGACAGACAAACCAAAATGATTTTGCCATTCCTACTCCAATATGAATGAGGAGGTGGGCATTGAGTTCATCCAGGACCCTTGTTGCTGGTGCTTGGAAAATTCTACCTTTGCTGTGACTTGGATGGAGGACTGATTCTCATTCATGTGTGGAAAACGCAAGTACATTCTTTATCACTTTTTACTGTGTTTACTAATATAATTGTGCGTGATGGGTAGATTTAGAATAGATAATATCTCCAAGTCTTTGCTTCTGTGACAGTTTTGAACTTTCTGTCCAAGTCTGTTTTGGTGCTTGGAGTAGTAAGATGTAAGAATTTAGTCTGA

mRNA sequence

GAGACAATTTCAACAGAGCTTAATTGAGCTAGAAGCTGAAGCAGAGCGTCTCCTTGTAGCCCGCAACGAAGTAAGCTTAAAAATATTTGAAGTTTGGCAACTTGGCTTACAAGATTACTTGTATTTCCTCCTCGCAATATACGCTCTTTGCCACTTAAATGGAGATTGCAGTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGTGCACATGGACGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTGGTGACGTTGACAGACAAACCAAAATGATTTTGCCATTCCTACTCCAATATGAATGAGGAGGTGGGCATTGAGTTCATCCAGGACCCTTGTTGCTGGTGCTTGGAAAATTCTACCTTTGCTGTGACTTGGATGGAGGACTGATTCTCATTCATGTGTGGAAAACGCAAGTACATTCTTTATCACTTTTTACTGTGTTTACTAATATAATTGTGCGTGATGGGTAGATTTAGAATAGATAATATCTCCAAGTCTTTGCTTCTGTGACAGTTTTGAACTTTCTGTCCAAGTCTGTTTTGGTGCTTGGAGTAGTAAGATGTAAGAATTTAGTCTGA

Coding sequence (CDS)

ATGGAGATTGCAGTGACTGCTTTGAGGAGGCGAGCAAGGACAACAAAGTCTAGTGTTCCATCGCCTTTTGAGTCAATAATGAAGGAGGTGGGGGGTTCTGAATCAAGGCCATTGGTGAAGGAGATTTGCACTACCTGCGGGAATCACGATTCTAATGAGTGCACATGGACGATGTTCCCAGGAACTGATGTGTTCGCCAGGGTACCATTTCATGCTGCTCATACAATCTTGGAGACAGATCAGTCGAAACTTGACTTTGAGGCAAAGAAATTACAGAGTTATGTAAAAGACCAGTCCCTTCTGATTTCAGAAAAAGGTGCCCTTGCTGACAAGATCAGTCCGGGGGTGCTCAAGTCATTGGTGACGTTGACAGACAAACCAAAATGA

Protein sequence

MEIAVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTDVFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTLTDKPK
BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: A0A0A0L6Z1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.9e-59
Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALRRRARTTKSSVPSPFESIMKEV G+ESRPLVKEICTTCGNHDSNE TW MFPGTD
Sbjct: 128 ALTALRRRARTTKSSVPSPFESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTD 187

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFARVPFHAAHTILETDQ+KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTL
Sbjct: 188 VFARVPFHAAHTILETDQTKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTL 247

Query: 124 TDKPK 129
           TDKPK
Sbjct: 248 TDKPK 252

BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: W9QHV2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.3e-53
Identity = 104/125 (83.20%), Postives = 118/125 (94.40%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALR+RARTTK+S+ SPFESIM+E+GG ESRPLVKE+C+TCGNHDS+E TW MFPGTD
Sbjct: 42  ALTALRKRARTTKTSILSPFESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFAR+PFHAAHTILETDQ +LDFEAK LQ+YVKD+SLLISE+GALADKISPGVLKSLVTL
Sbjct: 102 VFARIPFHAAHTILETDQERLDFEAKNLQTYVKDKSLLISERGALADKISPGVLKSLVTL 161

Query: 124 TDKPK 129
           TDK K
Sbjct: 162 TDKRK 166

BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: V4U8R1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022588mg PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 7.3e-53
Identity = 104/125 (83.20%), Postives = 117/125 (93.60%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALR+RARTTK+SV SPFESIMK+ GG  +RPLVKE+CTTCGNHDSNE TW MFPGTD
Sbjct: 42  ALTALRKRARTTKTSVTSPFESIMKDTGGPGTRPLVKEVCTTCGNHDSNEHTWMMFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFA++PFHAAHTILETDQ++LDFEAKKLQSYVK++SL ISEKGALADKISPGVL+SLVTL
Sbjct: 102 VFAKIPFHAAHTILETDQTRLDFEAKKLQSYVKEKSLFISEKGALADKISPGVLRSLVTL 161

Query: 124 TDKPK 129
           TDK K
Sbjct: 162 TDKSK 166

BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: A0A067H1A3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031062mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-52
Identity = 104/125 (83.20%), Postives = 117/125 (93.60%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALR+RARTTK+SV SPFESIMK+ GG  +RPLVKE+CTTCGNHDSNE TW MFPGTD
Sbjct: 42  ALTALRKRARTTKTSVISPFESIMKDTGGPGTRPLVKEVCTTCGNHDSNEHTWMMFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFA++PFHAAHTILETDQ++LDFEAKKLQSYVK++SL ISEKGALADKISPGVL+SLVTL
Sbjct: 102 VFAKIPFHAAHTILETDQTRLDFEAKKLQSYVKEKSLFISEKGALADKISPGVLRSLVTL 161

Query: 124 TDKPK 129
           TDK K
Sbjct: 162 TDKSK 166

BLAST of Cp4.1LG03g15740 vs. TrEMBL
Match: M5X2L2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012604mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-51
Identity = 98/125 (78.40%), Postives = 116/125 (92.80%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+T+LR+ ARTTK+SVPSPFESIMKE+ G ESRPLVKE+C TCGNHDSNE TW MFPGTD
Sbjct: 38  ALTSLRKIARTTKTSVPSPFESIMKEIAGPESRPLVKEVCPTCGNHDSNERTWMMFPGTD 97

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFAR+PFHAAHT+LE++Q +LDF+++KLQS VK++SLLISEKG LADK+SPGV+KSLVTL
Sbjct: 98  VFARIPFHAAHTVLESEQEQLDFDSRKLQSIVKEKSLLISEKGVLADKVSPGVMKSLVTL 157

Query: 124 TDKPK 129
           TDKPK
Sbjct: 158 TDKPK 162

BLAST of Cp4.1LG03g15740 vs. TAIR10
Match: AT3G15351.1 (AT3G15351.1 unknown protein)

HSP 1 Score: 175.6 bits (444), Expect = 1.9e-44
Identity = 81/124 (65.32%), Postives = 107/124 (86.29%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALR+RARTTK+SV SPF+S+MK++ GS ++PLV+E+C+TCG+HDS+E TW M PG D
Sbjct: 42  ALTALRKRARTTKTSVMSPFDSMMKDIHGSSTKPLVQEVCSTCGSHDSSEPTWMMLPGAD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           +FA +PFHA HT+LE D+ K++FE+KKLQS VK+++L ISE GALAD ISPGV++SLV L
Sbjct: 102 LFAAIPFHAVHTMLEKDEEKMEFESKKLQSLVKEKALFISELGALADGISPGVIRSLVAL 161

Query: 124 TDKP 128
            DKP
Sbjct: 162 EDKP 165

BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|659074783|ref|XP_008437793.1| (PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo])

HSP 1 Score: 235.3 bits (599), Expect = 5.8e-59
Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALRRRARTTKSSVPS FESIMKEVGG+ESRPLVKEICTTCGNHDSNE TW MFPGTD
Sbjct: 42  ALTALRRRARTTKSSVPSSFESIMKEVGGAESRPLVKEICTTCGNHDSNERTWMMFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTL
Sbjct: 102 VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTL 161

Query: 124 TDKPK 129
           TDKPK
Sbjct: 162 TDKPK 166

BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|449431974|ref|XP_004133775.1| (PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALRRRARTTKSSVPSPFESIMKEV G+ESRPLVKEICTTCGNHDSNE TW MFPGTD
Sbjct: 42  ALTALRRRARTTKSSVPSPFESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFARVPFHAAHTILETDQ+KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTL
Sbjct: 102 VFARVPFHAAHTILETDQTKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTL 161

Query: 124 TDKPK 129
           TDKPK
Sbjct: 162 TDKPK 166

BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|700201229|gb|KGN56362.1| (hypothetical protein Csa_3G117970 [Cucumis sativus])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 117/125 (93.60%), Postives = 122/125 (97.60%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALRRRARTTKSSVPSPFESIMKEV G+ESRPLVKEICTTCGNHDSNE TW MFPGTD
Sbjct: 128 ALTALRRRARTTKSSVPSPFESIMKEVEGAESRPLVKEICTTCGNHDSNERTWMMFPGTD 187

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFARVPFHAAHTILETDQ+KLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLK++VTL
Sbjct: 188 VFARVPFHAAHTILETDQTKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKAMVTL 247

Query: 124 TDKPK 129
           TDKPK
Sbjct: 248 TDKPK 252

BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|1009143797|ref|XP_015889451.1| (PREDICTED: uncharacterized protein LOC107424226 [Ziziphus jujuba])

HSP 1 Score: 219.5 bits (558), Expect = 3.3e-54
Identity = 107/123 (86.99%), Postives = 116/123 (94.31%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALR+RARTTK+SVPSPFESIM+E+GGS SRPLVKE+C TCGNHDSNE TW +FPGTD
Sbjct: 42  ALTALRKRARTTKTSVPSPFESIMREIGGSNSRPLVKEVCATCGNHDSNERTWMVFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFARVPFHAAHTILETDQ +LDFE KKLQSYVKD+SLLISEKGALADKISPGVL SLVTL
Sbjct: 102 VFARVPFHAAHTILETDQDRLDFETKKLQSYVKDKSLLISEKGALADKISPGVLNSLVTL 161

Query: 124 TDK 127
           TDK
Sbjct: 162 TDK 164

BLAST of Cp4.1LG03g15740 vs. NCBI nr
Match: gi|703072343|ref|XP_010089260.1| (hypothetical protein L484_021790 [Morus notabilis])

HSP 1 Score: 215.3 bits (547), Expect = 6.2e-53
Identity = 104/125 (83.20%), Postives = 118/125 (94.40%), Query Frame = 1

Query: 4   AVTALRRRARTTKSSVPSPFESIMKEVGGSESRPLVKEICTTCGNHDSNECTWTMFPGTD 63
           A+TALR+RARTTK+S+ SPFESIM+E+GG ESRPLVKE+C+TCGNHDS+E TW MFPGTD
Sbjct: 42  ALTALRKRARTTKTSILSPFESIMREIGGPESRPLVKEVCSTCGNHDSSERTWMMFPGTD 101

Query: 64  VFARVPFHAAHTILETDQSKLDFEAKKLQSYVKDQSLLISEKGALADKISPGVLKSLVTL 123
           VFAR+PFHAAHTILETDQ +LDFEAK LQ+YVKD+SLLISE+GALADKISPGVLKSLVTL
Sbjct: 102 VFARIPFHAAHTILETDQERLDFEAKNLQTYVKDKSLLISERGALADKISPGVLKSLVTL 161

Query: 124 TDKPK 129
           TDK K
Sbjct: 162 TDKRK 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L6Z1_CUCSA8.9e-5993.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G117970 PE=4 SV=1[more]
W9QHV2_9ROSA4.3e-5383.20Uncharacterized protein OS=Morus notabilis GN=L484_021790 PE=4 SV=1[more]
V4U8R1_9ROSI7.3e-5383.20Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022588mg PE=4 SV=1[more]
A0A067H1A3_CITSI1.2e-5283.20Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g031062mg PE=4 SV=1[more]
M5X2L2_PRUPE5.3e-5178.40Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012604mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G15351.11.9e-4465.32 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659074783|ref|XP_008437793.1|5.8e-5994.40PREDICTED: uncharacterized protein LOC103483126 [Cucumis melo][more]
gi|449431974|ref|XP_004133775.1|1.3e-5893.60PREDICTED: uncharacterized protein LOC101220956 [Cucumis sativus][more]
gi|700201229|gb|KGN56362.1|1.3e-5893.60hypothetical protein Csa_3G117970 [Cucumis sativus][more]
gi|1009143797|ref|XP_015889451.1|3.3e-5486.99PREDICTED: uncharacterized protein LOC107424226 [Ziziphus jujuba][more]
gi|703072343|ref|XP_010089260.1|6.2e-5383.20hypothetical protein L484_021790 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g15740.1Cp4.1LG03g15740.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21162P53 AND DNA DAMAGE-REGULATED PROTEINcoord: 35..128
score: 4.7

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g15740Cp4.1LG08g00390Cucurbita pepo (Zucchini)cpecpeB482